Cp4.1LG01g16660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhytanoyl-CoA dioxygenase domain-containing protein 1
LocationCp4.1LG01 : 10325605 .. 10330959 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATTCAAATTAAAACTTAAATATAAATTACAGCACTACTTAGAAAAAATATAAAAAATATAAAAAAAAAATAAATAAAAACTTATTTTCAATTTAAAATATTGGACACGAGTGTTTGGGTGAAGGTGGGGATTTCAATCATTGCACGTAGGGTATTTAGAATTGAGAATACGCATTGGAAGCTGTTTGGTAAGACCGCCATGGGAATTGTTGGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTACGTTTCCACGCTCCCATCATCGACTTCTGTTTTCCAATCTTAATCGCTCTTCCAATTTCCACCATCATCGAACTTCTTCTCCTCCTGTTTTCTCTTATTTTTTCGCAGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGATGCCATGAGAAAGAGAATGGAGCAGTTGCTCGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGGTTTTTGTTTTAATAATTGATTTATTTTTTAGTAATGACTCATCGAAACTTCAGAAATTTGTATTCGAACTTCTAACTATTAGCGTTATGATCTGTTTGTGTTGAAATGTGCTTTCCCGTGTTTTTGTTACTCTATAGCAGCAGTTGACCGACGATTATTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGGTATCTTACACTCTTGCCCTTTGTGTATCATTTTAATCATCTTTCTAAGTTTTCATTGTGATAGTTTCACATATACTTTTTTTTTTTTTTTTCTTTTAGCATCAGAGTTTTTGGGAACTTAGTTAAGAAAATTTTTATGATGCCGATTCAAAACTTGTATACTCATTCATGTGCGAAAGAAATATGTGTTAGCTGTAGATACTGGCCATTATTCGTGATTGATGGAGCTCCTTCAGTGAGATTTCAGGATAAATAAGTTTTGGTTACAAAGAAATGTGGACATGATTTTGCCTTGGATGGGATTGGGTCCAAACCTATTAATTTGAAGTTAGTATTTAGCAACTTCAATCCAATGATCAAATAGTAAAACTTGCTTTGTTATTCTTGTGAAAAGTAGGATTTGAATATGTTATTCACGAATCTATACAAAATTTTCATAAGTATGGTCCATGCCAATCGCCCCCCCTTTTATTTATTTTGCAGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGGTTTGTATTCTTCTATTATAGTAGACTGTTGATCCCGATAGAAACTTTTTATATCTTTTCTCTCTCTTTAGCATGGGTTTCAACTTCATCTTGGCGTACTTGGGTTTAAATGTACTCCTAACTTTTATTACTTTCACTAGGCCATTATGACTTTCAAAATAGATTCTCTCCATGCCTAGAAGCTCATAAAATAAAACCTTGGAATTCAGGATTTTTTTAATGATGCGAAATTGGGGACTTTTTTATAATAAAAATTATAATTAACCCTTCCTTTTTGTAGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGGTTTTCCCTTTGTCGTTGTATAATTTATTAATACTAGTGTGTTAGTTTTATTCAAGTAAGTTTAATTATATATTAATGTTTGGAGGCCACTCTGACAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAGTATCCCCTGACAAGCAACTTCATAGATAGCAAACTGTCATTCCTTATGTCTAATTAATTTTATTTTTTGAATCTCTTTATTTCTAGATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGGTATGTGTAAGGAATATTAAACTATTTCATTAGTTGGTCGACGTTGACAGGTTGTCTATAAATTTATACTATTCTCAATTTTTCATTCAAAGAAACTTTTTTTGTGTTTCCATCACCATTGACTCAAAAAGTACTATTCATTCTCAGCATTTGTTAAAAGTGGCTACACAGCATACCATCTCACTATTGCTAGTGATGTTAATTCATGTGAAAAGCGATGCAGTATATATATATATATATATATATAAAACAATGTCCCAGAATTTGTGTTTGTCCGGAGACTACTGGTTAATATTAGATTCAACATCATATGCTAAGTTTGGTGATTTTTCTAAGCACTCTGAGGAGTATGAGCTAAATTCTCCAGTTGTATGTTTTCCTTTAAAATATAAATTATGACAATTTTATCCCGAAGCTCATTGCTGTCCAATTTCTCTCATGTGTGAACTATAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGTGAGTACATAAAAGTTTGCACTGTTTACCCGCTCTCTTAAATAAAGGGGCTAATTTTCCATAGACAGATTCATTTTATTTTGTTATTGAAGGAACCTTAACTAGTTTTGATATTAATACTTCCGTCAGCTATTGTTTAAATGTTTTCATCTAGCATATAAATTTTTTTTATTTTTTATTTTTACATAGAATTTAGAACAAACTTTCATTGAGAGATATGATTATAAATGTGGAAGATACCTCCCTCACAAAGCCTACAGTTAAGCTAATATGTGTATGGTTAGCTCCACTCTTTAGTTAATTTTCCAATTATTTATAATAAGAAAAGAGATGCCTCAAAATAATTAAGGCTCTAAGCAGAACCGTTTTTTTCTTTTAAAGGAAATAGAAATACTGTTGTCGAATGAAATTACAAAAGAGGGGGAGATTCCCAAGTCATTTGGATTTCAAAAGGACCTTCCATCTGACCAAAAGAATGCTGAACCTATAGTTGGAGAAAGGAAGATAACGTTTTCTCATATATAGTGCTAAAGTGAGAACTTTGTTCGAAGTAGATTCAGAAGTATCCTTCATTTCAGTAAGATGATATTGTTTTTGTGACCAAAGCTTTCCAAAGAAGGCTAACATTTAGAGACAGAATTTCTTTCTTTTTTTTAAATGGGTGACCCAACAATTTGGCAACAAGAAAATCGCTTGGATTGATAGGAACTCCGGACTGCAGCATGCCAATTGAAAGATTCTCGGATTGAAAGGCCAACATTTATGACCTTAGGGGTTTGAGACGAACGGATGTCCTATTGATCCAGCATCCTCATCACACATGCAGCACCACCCATGGAAGGTGGTTTGGCAGTTTGAAATGCACATACAACCTCATTACTGAAAAGTAATTGGCCAGTTGGCTCAAAGCACCACCTTTCAGGTCTTCTAGAAAGGGTTGTACACGATTTTGTGGGAAAATCAAGGAATTTGGAGACGTTGATCCTTGGGGCCTTTTCCTCCTAGGTTAGTGAGTTTGGAGGCATTGAACATAGCAAACATCCTCCAAATGAGATCATATGAACGAATTGGTTACATGGCATGTATAAACCCCCACCTTCTGAAGGAGTTGAATTCTCCAAATTCTCTTACATGAGAAGACTGTGTCAGGAAAAATTTAAGAATGGAAACTAGACAAGTCAAGATCCTGATTCCCTTGTTCTATCCGGAATAGAGTAGTTCTTTTAACTTTGAAGTATTCTTTAGACACCACCTTCATCTCTCGGTTATTAATAATCCTTCTAAAGCGAAAGGAAGAGTGGTCGAGGGAAGTCTTGCATGGCTGGCGGCTTGTTTGCAAGGCAAGGGCTGATTTTGAAAGAAAGAAACGATAGATTCTGTAAAGATAATCACAATTCTTGTGGTTACCTTTGTGACCTAGTACAATTCACGGCCTCTAATTGGAGTAGCTAACACAGGCCTTTTTGTAAAAACTCCACTTTCCATATGAGCTTAGAATGGAAGGTGTGGCTGTATTCTTACTCCTTGGAGAGGGGACCCCTTCGCCCTTTAGGTTGTTTTCTTTTTAACCTCTTTACTTTATTTCCAAATTAAGTGTTTTCATGTGTCTTATAAGGGGATGTTAGCGTAGTTGACTCAATTGAAGAATATAGAAGAATCACATTAGCTCTAGCTTGGATGAAGAAAGTCTGTCCAGATTATTCTTCCATTCTGGTTTAGTTCCTTAGATTATGGTTCAGTACTACATTCCCATCTAAAGCTAACATATTTTTTTAGTTATTGGCTTGGAGGAGATTCAACATTGTTGATCTCTTGCAAAAAAGAATGTCAATTTTAATTTCATTGTATTAAGCTGAATCTGAGATGAGTAACATAGGAGTCATTTATACGGATGCTAGAAACTATGAGGCATCCTATTGTATCAACATCTGTGCTCTGTTTTAGGTTTGAGGCAATGCTATTTCAACATGAAGTTCTATTTATAGTTGGGGCAAGCTGCGAGGCAGTGACTGACTCCATTGTATTTAAGATTATTGCCCATAGTTGAGTCAGGAAAAAAACTATTGGTCCAGTTTGGAATCTCCAGCTTCAATTTTGGGATGTTAGGCACGGTGTATGAGGATTCTTTTTTAAAATTTTTATTTTTGTTTTGACTGAAAATGCTCCAAAAAAACGATGCAGACATTAATTATAGTGGCCATTGAAAATAATGGATAAGTTGACATTGATTCATAATAATTATTAAATTGAGAGGAGTATCGTTTGTATTTCCCTCAGATATATCATCTCCTAACATTCATCCTTCATTCTCATACAGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGATTGAATCTGGTTTGTTTCTTCACAAAGTTTACACCTGATTGTTCATATGACATATGGGGTGACACAGTTGTTATAATGCAATAAATAGACGTGCTAAAGTTTCATTAACTCAACTCTGTAATCTTTGTAGCTTTTAAGATATTCCTCACAATTGCTAAGGCTTAGGTTGTATAACCATCTTTATCCTGTCTTGGATGTATTTGATTTAGTTGTTTATTTCATACTGATTAAGTTTCCTTTATCATGTCCTTGGGAATCCCGATGGTGACTTAGGATCAAATTTTATTGTGGTCTTTTCGTTTGACATGCCTTAAAAAAAGAAGGCACATTACTTTTCAC

mRNA sequence

CTATTCAAATTAAAACTTAAATATAAATTACAGCACTACTTAGAAAAAATATAAAAAATATAAAAAAAAAATAAATAAAAACTTATTTTCAATTTAAAATATTGGACACGAGTGTTTGGGTGAAGGTGGGGATTTCAATCATTGCACGTAGGGTATTTAGAATTGAGAATACGCATTGGAAGCTGTTTGGTAAGACCGCCATGGGAATTGTTGGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGATGCCATGAGAAAGAGAATGGAGCAGTTGCTCGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGCAGCAGTTGACCGACGATTATTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGATTGAATCTGGTTTGTTTCTTCACAAAGTTTACACCTGATTGTTCATATGACATATGGGGTGACACAGTTGTTATAATGCAATAAATAGACGTGCTAAAGTTTCATTAACTCAACTCTGTAATCTTTGTAGCTTTTAAGATATTCCTCACAATTGCTAAGGCTTAGGTTGTATAACCATCTTTATCCTGTCTTGGATGTATTTGATTTAGTTGTTTATTTCATACTGATTAAGTTTCCTTTATCATGTCCTTGGGAATCCCGATGGTGACTTAGGATCAAATTTTATTGTGGTCTTTTCGTTTGACATGCCTTAAAAAAAGAAGGCACATTACTTTTCAC

Coding sequence (CDS)

ATGGGAATTGTTGGTGATCTCAGCTCGGATCAACTCCAGTTCTTCGACTCACATGGTTATCTTGTGGTTGAATCATTCGCCAGTCCTGATGAAATTGATGCCATGAGAAAGAGAATGGAGCAGTTGCTCGATGAATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTAAATCAGCAGCAGTTGACCGACGATTATTTCTTCGAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTCAAGAGGATGGAGACTTGAAACAAGCGAAGGAACTCTCAATTAACAAAGTTGGTCATGCATTACATGAGATTGACCCAGTTTTCAAAAGCTTCTCCAGCTCTAAGAAGGTTTCAGGTTTATTGTTGTCCTTGGGGTACAAGAAGCCGATAGTCATTCAGTCTATGTACATATTTAAGCAACCAGGCATTGGAGGTGAAGTTGTGCCTCACCAGGATAACTCATTTCTTTACACCGAACCAACTACATGCACAGGGCTATGGCTAGCACTTGAAGATGCAAATACAACGAACGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGATTTCTTAGAGGCGACAACGGGGTGTACTTTGATCAGCCTTCTCCTGCTTACGAACATAAAGATTTCGTGCCTATTGAAGTGAGAGCTGGATCATTGGTTGTTATTCATGGAGACCTTATTCATCAAAGCTTTGAGAATCACTCTCCAAAATCAAGACATGCGTATAGCCTACACGTGGTTGATACAGAAGGTTGTGTATGGGCTCCAGATAATTGGATTAGAAGAAAAGTGCAGCCAGAGCCTCTTTATGAATCTTGA

Protein sequence

MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES
Homology
[Close]
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match: PAHX_ARATH (Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana GN=PAHX PE=2 SV=2)

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-125
Identity = 206/280 (73.57%), Postives = 241/280 (86.07%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI G L+ DQL FF S GYLV+ESFAS DEI  +RKRM++LL++FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TD+YFFESAE ISFFFEEKAF +DG LKQ K+LSINKVGHALHE+DP++K F+ S K 
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY++P+V+QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRF+RGDNG+ FDQPSP+YE KDFV IE++AGSL+ IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

[Close]
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match: PAHX1_ORYSJ (Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0708100 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-113
Identity = 192/278 (69.06%), Postives = 230/278 (82.73%), Query Frame = 1 

Query: 5   GDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTD 64
           G L+ +QL+FFD++GYLV+ SF+S +E+ AMR RM +L+D FD     VFST + +Q+ +
Sbjct: 5   GSLTDEQLRFFDANGYLVLGSFSSAEEVRAMRDRMAELVDGFD-GAGDVFSTKDHRQVKN 64

Query: 65  DYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLL 124
           D+FF+SAENISFFFEEKAF +DG LKQAKELSINKVGHALHE+DPVFK FS    VS L 
Sbjct: 65  DFFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGANVSSLF 124

Query: 125 LSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLW 184
            SL YK+P VIQSMYIFKQPGIGGEVVPHQDN+FLYT+P +CTGLWLALEDA  TNGCLW
Sbjct: 125 SSLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTDPPSCTGLWLALEDATKTNGCLW 184

Query: 185 AIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENH 244
           AIPGSHKNGL RR +R +   +FD PSP Y+ K+FVP+EV++G LVVIHGDLIHQSFEN 
Sbjct: 185 AIPGSHKNGLKRRMIRDEIDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLIHQSFENL 244

Query: 245 SPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           SP SRHA SLHV+DTEGC W+  NW++RK+ P+PLYE+
Sbjct: 245 SPVSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match: PAHX2_ORYSJ (Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica GN=Os05g0473900 PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 8.9e-113
Identity = 191/278 (68.71%), Postives = 227/278 (81.65%), Query Frame = 1 

Query: 5   GDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQQLTD 64
           G L+  QL FFD++GYLV+ SF+S +E+ AMR RM  L+D FD     VFST + +Q+ +
Sbjct: 5   GSLTDKQLHFFDANGYLVLGSFSSAEEVKAMRDRMAVLIDGFD-GAGDVFSTKDHRQVKN 64

Query: 65  DYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKVSGLL 124
           D+FF+SAENISFFFEEKAF +DG LKQAKELSINKVGHALHE+DPVFK FS  + VS L 
Sbjct: 65  DFFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGENVSSLF 124

Query: 125 LSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLW 184
            SL YK+P VIQSMYIFKQPGIGGEVVPHQDN+FLYT P +CTGLWLALEDA  TNGCLW
Sbjct: 125 SSLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTNPPSCTGLWLALEDATKTNGCLW 184

Query: 185 AIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQSFENH 244
           AIPGSHKNGL RR +R +N  +FD PSP Y+ K+FVP+EV++G LVVIHGDL+HQSFEN 
Sbjct: 185 AIPGSHKNGLKRRMIRDENDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLVHQSFENL 244

Query: 245 SPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           S  SRHA SLHV+DTEGC W+  NW++RK+ P+PLYE+
Sbjct: 245 SLVSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN 281

[Close]
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match: PHYD1_MOUSE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus GN=Phyhd1 PE=1 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-68
Identity = 137/285 (48.07%), Postives = 180/285 (63.16%), Query Frame = 1 

Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFD----CSTSSVFSTVNQQQL 66
           LS  QL+ F   G+L++E F + DE  AM++R+ +++ E D    C T   FST   +QL
Sbjct: 4   LSPSQLKKFQEDGFLLLEGFFTADECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQL 63

Query: 67  TD----DYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSK 126
                 DYF  S + I FFFE+  F E G+     E SINK+GHALH  DPVF+S + S 
Sbjct: 64  QTQGKTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSP 123

Query: 127 KVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           KV  L+ SLG + P+V+QSMYIFKQP  GGEV PHQD +FLYTEP     GLW+A+EDA 
Sbjct: 124 KVQALVRSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIAMEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLRGDN----GVYFDQPSPAYEHKDFVPIEVRAGSLVVIH 246
             NGCLW IPGSH  G+ RR +R  +    G  F    PA+    FVP+ VR G LV+IH
Sbjct: 184 LENGCLWFIPGSHTRGVSRRMIRAPSDSGPGTSFLGSDPAWASNLFVPLPVRRGGLVLIH 243

Query: 247 GDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEP 279
           G+++H+S +NHS  SR AY++H+++  G VW+P NW+    QP P
Sbjct: 244 GEVVHKSEQNHSDHSRQAYTVHLMEAAGTVWSPGNWL----QPTP 282

[Close]
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match: PHYD1_BOVIN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus GN=PHYHD1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-68
Identity = 135/285 (47.37%), Postives = 181/285 (63.51%), Query Frame = 1 

Query: 7   LSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFD----CSTSSVFSTVNQQQL 66
           LS  QLQ F   G+LV+E F S DE +AM++R+++++ + D    C T   FST  ++QL
Sbjct: 4   LSPSQLQKFQEDGFLVLEGFLSADECEAMQRRIDEIVAKMDVPLHCRTE--FSTQEEEQL 63

Query: 67  ----TDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSK 126
               + DYF  S + I FFFE+  F + G+     E SINK+GHALH +DP+F+  + S 
Sbjct: 64  RAQGSTDYFLSSGDKIRFFFEKGVFDKQGNFLVPPEKSINKIGHALHALDPIFRCVTHSH 123

Query: 127 KVSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           KV  L  SLG + P+V+QSMYIFKQP  GGEV PHQD SFLYTEP     GLW+ALEDA 
Sbjct: 124 KVQALARSLGLQMPVVVQSMYIFKQPHFGGEVAPHQDASFLYTEPLGRVLGLWIALEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLR----GDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIH 246
             NGCLW IPGSH  G+ RR +R       G  F    P  ++  FVP  V  G+LV+IH
Sbjct: 184 LENGCLWFIPGSHTGGVSRRMVRTPAGSVPGTSFLGSEPIRDNSLFVPTPVLRGALVLIH 243

Query: 247 GDLIHQSFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEP 279
           G+++H+S +N S +SR AY+ H+++  G +W+PDNW+    QP P
Sbjct: 244 GEVVHKSEQNLSDRSRQAYTFHLMEAAGTIWSPDNWL----QPTP 282

[Close]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match: A0A0A0KPM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289600 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 1.6e-137
Identity = 238/269 (88.48%), Postives = 248/269 (92.19%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDEI AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           Q TDDYF +SAENISFFFEEKAF EDG+LKQ KELSINKVGHALHE DPVFKSFS S+K 
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y  KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNW 270
           FEN SPKSRHAYSLHVVDTEGCVWA DNW
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 269

[Close]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match: A0A067L1T9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04707 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.6e-135
Identity = 227/282 (80.50%), Postives = 256/282 (90.78%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI   L+SDQLQ F++ GYLV+ESFA+ +EIDA+ KRM+QLLD+FDCST+S+FST NQQ
Sbjct: 1   MGITRSLTSDQLQSFNAQGYLVIESFANAEEIDALMKRMDQLLDDFDCSTASIFSTKNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           QLTDDYF+ESAE ISFFFEEKAF +DG+L+Q K LSINKVGHALHE+DP FKSFSSS+K 
Sbjct: 61  QLTDDYFYESAEKISFFFEEKAFGDDGNLQQPKHLSINKVGHALHELDPEFKSFSSSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
             +L SLGYK+P+VIQSMYIFKQPGIGGEVVPHQDNSFLYTEP TCTGLWLALEDA T N
Sbjct: 121 LSMLFSLGYKRPVVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPPTCTGLWLALEDATTVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWA+PGSHKNGLVRRF+RG+ GVYFD+PSP+YE KDFVPIEV+AGSLV+IHGDLIHQS
Sbjct: 181 GCLWAVPGSHKNGLVRRFIRGEQGVYFDRPSPSYELKDFVPIEVKAGSLVIIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDT+GC WA DNWIRRKV+PEPLY S
Sbjct: 241 FENRSPKSRHAYSLHVVDTDGCKWAQDNWIRRKVEPEPLYAS 282

[Close]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match: D7T8S3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05010 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.2e-134
Identity = 229/283 (80.92%), Postives = 256/283 (90.46%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTS-SVFSTVNQ 60
           MGI G  S +QL  F S G+LV+ESF+SP+EID MR+RM+QLLD FDCST+ S+FST NQ
Sbjct: 1   MGISGKPSPEQLHSFHSQGFLVIESFSSPEEIDDMRRRMDQLLDGFDCSTAASIFSTKNQ 60

Query: 61  QQLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKK 120
           Q+LTDDYF+ESAE ISFFFEEKAF EDG+LKQAK+LSINKVGHALHEIDPVFK+FS S+K
Sbjct: 61  QKLTDDYFYESAEKISFFFEEKAFGEDGNLKQAKQLSINKVGHALHEIDPVFKTFSCSEK 120

Query: 121 VSGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTT 180
           +S L+LSLGYK P++IQSMYIFKQPGIGGEVVPHQDNSFLYTEP TCTGLWLALEDA   
Sbjct: 121 LSSLMLSLGYKGPVIIQSMYIFKQPGIGGEVVPHQDNSFLYTEPPTCTGLWLALEDATIL 180

Query: 181 NGCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQ 240
           NGCLWAIPGSHKNGLVRRF+RGD GVYFDQPSP+Y+ KDFVP+EV+AGSLVV+HGDLIHQ
Sbjct: 181 NGCLWAIPGSHKNGLVRRFIRGDEGVYFDQPSPSYDDKDFVPVEVKAGSLVVLHGDLIHQ 240

Query: 241 SFENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           SFEN SPKSRHAYSLHVVDT+GC WA +NWIRRKV PEPLYES
Sbjct: 241 SFENQSPKSRHAYSLHVVDTDGCKWAQENWIRRKVDPEPLYES 283

[Close]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match: A9PET6_POPTR (Phytanoyl-CoA dioxygenase family protein OS=Populus trichocarpa GN=POPTR_0006s23940g PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 2.9e-134
Identity = 225/282 (79.79%), Postives = 256/282 (90.78%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI G LSSDQ   F+S GYLV+ESFA+P++I++M KRM++LLD+FD +  SVFST NQ+
Sbjct: 1   MGITGTLSSDQFDSFNSQGYLVIESFANPEDIESMMKRMDKLLDDFDYTNVSVFSTKNQR 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           ++TDDYF++SAENISFFFEEKAF +DG LKQ K+LSINKVGHALHE+DPVFK FSSS+K 
Sbjct: 61  KVTDDYFYQSAENISFFFEEKAFGDDGSLKQPKQLSINKVGHALHELDPVFKGFSSSEKC 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLL SLGYKKP++IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTG+WLALEDA   N
Sbjct: 121 SGLLSSLGYKKPVIIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGMWLALEDATLLN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRG+NGVYFDQPSP+Y+ KDFVPIEV+AGSLV+IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGENGVYFDQPSPSYDQKDFVPIEVKAGSLVLIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN S KSRHAYS HVVDT+GC WAP+NWIRRKV+PEPLY S
Sbjct: 241 FENQSSKSRHAYSWHVVDTDGCKWAPENWIRRKVEPEPLYAS 282

[Close]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match: A0A059CY02_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00057 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.9e-133
Identity = 226/280 (80.71%), Postives = 252/280 (90.00%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MG  G LS DQL+FF S GYLV+ESFA P+EIDAM +RMEQL+DEFDCST+S+FST NQQ
Sbjct: 1   MGAKGYLSPDQLEFFSSQGYLVMESFARPEEIDAMMRRMEQLVDEFDCSTASIFSTKNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           Q TDDYF+ESAEN+SFFFEEKAF +DG+LKQ K+LSINKVGHALHE+DPVFK+FSSS+K 
Sbjct: 61  QHTDDYFYESAENVSFFFEEKAFGDDGNLKQPKQLSINKVGHALHELDPVFKAFSSSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
            G+LLSLGY+KPI+IQSMYIFKQPGIGGEVVPHQDNSFLYTEP TCTGLWLALEDA  TN
Sbjct: 121 CGMLLSLGYRKPIIIQSMYIFKQPGIGGEVVPHQDNSFLYTEPPTCTGLWLALEDATITN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRF+RG+ GV FD PSP Y+ KDFV IEV+AGSLV+IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGEGGVSFDHPSPTYDKKDFVAIEVKAGSLVLIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVVDT+GC WA  NWIRRKV+PEPL+
Sbjct: 241 FENQSSKSRHAYSLHVVDTDGCKWAQSNWIRRKVEPEPLF 280

[Close]
BLAST of Cp4.1LG01g16660 vs. TAIR10
Match: AT2G01490.1 (AT2G01490.1 phytanoyl-CoA dioxygenase (PhyH) family protein)

HSP 1 Score: 450.3 bits (1157), Expect = 8.8e-127
Identity = 206/280 (73.57%), Postives = 241/280 (86.07%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGI G L+ DQL FF S GYLV+ESFAS DEI  +RKRM++LL++FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TD+YFFESAE ISFFFEEKAF +DG LKQ K+LSINKVGHALHE+DP++K F+ S K 
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY++P+V+QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRF+RGDNG+ FDQPSP+YE KDFV IE++AGSL+ IHGDLIHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLY 281
           FEN S KSRHAYSLHVV+++GC WA DNWI+R   PEPLY
Sbjct: 241 FENLSSKSRHAYSLHVVESDGCKWAKDNWIQRAKMPEPLY 280

[Close]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match: gi|778701909|ref|XP_011655108.1| (PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus])

HSP 1 Score: 523.9 bits (1348), Expect = 1.8e-145
Identity = 251/282 (89.01%), Postives = 261/282 (92.55%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDEI AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           Q TDDYF +SAENISFFFEEKAF EDG+LKQ KELSINKVGHALHE DPVFKSFS S+K 
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y  KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDTEGCVWA DNWIRRKVQPEPLYES
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 282

[Close]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match: gi|778701913|ref|XP_011655109.1| (PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 9.8e-144
Identity = 250/282 (88.65%), Postives = 260/282 (92.20%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDEI AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TDDYF +SAENISFFFEEKAF EDG+LKQ KELSINKVGHALHE DPVFKSFS S+K 
Sbjct: 61  S-TDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y  KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDTEGCVWA DNWIRRKVQPEPLYES
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQPEPLYES 281

[Close]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match: gi|659130528|ref|XP_008465221.1| (PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis melo])

HSP 1 Score: 515.4 bits (1326), Expect = 6.3e-143
Identity = 246/282 (87.23%), Postives = 261/282 (92.55%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDE+ AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TDDYF +SAENISFFFEEKAF EDG+LKQ K+LSINKVGHALHE+DPVFKSFS S+K 
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y+ KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDTEGCVWA DNWIRRKVQ EPLYE+
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQLEPLYET 282

[Close]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match: gi|659130532|ref|XP_008465222.1| (PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis melo])

HSP 1 Score: 509.6 bits (1311), Expect = 3.5e-141
Identity = 245/282 (86.88%), Postives = 260/282 (92.20%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDE+ AMR RME LL  FDCSTSSVFSTVNQ 
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQL 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
             TDDYF +SAENISFFFEEKAF EDG+LKQ K+LSINKVGHALHE+DPVFKSFS S+K 
Sbjct: 61  S-TDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y+ KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNWIRRKVQPEPLYES 283
           FEN SPKSRHAYSLHVVDTEGCVWA DNWIRRKVQ EPLYE+
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNWIRRKVQLEPLYET 281

[Close]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match: gi|700195672|gb|KGN50849.1| (hypothetical protein Csa_5G289600 [Cucumis sativus])

HSP 1 Score: 496.9 bits (1278), Expect = 2.3e-137
Identity = 238/269 (88.48%), Postives = 248/269 (92.19%), Query Frame = 1 

Query: 1   MGIVGDLSSDQLQFFDSHGYLVVESFASPDEIDAMRKRMEQLLDEFDCSTSSVFSTVNQQ 60
           MGIV +L+SDQLQFF SHGYLV+ESFA+PDEI AMR RME LL  FDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QLTDDYFFESAENISFFFEEKAFQEDGDLKQAKELSINKVGHALHEIDPVFKSFSSSKKV 120
           Q TDDYF +SAENISFFFEEKAF EDG+LKQ KELSINKVGHALHE DPVFKSFS S+K 
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKKPIVIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYK+PI IQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLRGDNGVYFDQPSPAYEHKDFVPIEVRAGSLVVIHGDLIHQS 240
           GCLWAIPGSHKNGLVRRFLRGD GVYFDQPSP Y  KDFVPIEV+AGSLVVIHGD+IHQS
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQS 240

Query: 241 FENHSPKSRHAYSLHVVDTEGCVWAPDNW 270
           FEN SPKSRHAYSLHVVDTEGCVWA DNW
Sbjct: 241 FENQSPKSRHAYSLHVVDTEGCVWAQDNW 269

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PAHX_ARATH1.6e-12573.57Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana GN=PAHX PE=2 SV=2[more]
PAHX1_ORYSJ1.1e-11369.06Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0708100 PE=2... [more]
PAHX2_ORYSJ8.9e-11368.71Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica GN=Os05g0473900 PE=2... [more]
PHYD1_MOUSE1.4e-6848.07Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus GN=Phyhd1 ... [more]
PHYD1_BOVIN1.8e-6847.37Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus GN=PHYHD1 PE... [more]
BLAST of Cp4.1LG01g16660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPM7_CUCSA1.6e-13788.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289600 PE=4 SV=1[more]
A0A067L1T9_JATCU2.6e-13580.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04707 PE=4 SV=1[more]
D7T8S3_VITVI2.2e-13480.92Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05010 PE=4 SV=... [more]
A9PET6_POPTR2.9e-13479.79Phytanoyl-CoA dioxygenase family protein OS=Populus trichocarpa GN=POPTR_0006s23... [more]
A0A059CY02_EUCGR1.9e-13380.71Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00057 PE=4 SV=1[more]
BLAST of Cp4.1LG01g16660 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01490.18.8e-12773.57 phytanoyl-CoA dioxygenase (PhyH) family protein[more]
BLAST of Cp4.1LG01g16660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778701909|ref|XP_011655108.1|1.8e-14589.01PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus][more]
gi|778701913|ref|XP_011655109.1|9.8e-14488.65PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus][more]
gi|659130528|ref|XP_008465221.1|6.3e-14387.23PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Cucumis melo][more]
gi|659130532|ref|XP_008465222.1|3.5e-14186.88PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis melo][more]
gi|700195672|gb|KGN50849.1|2.3e-13788.48hypothetical protein Csa_5G289600 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0048244 phytanoyl-CoA dioxygenase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16660.1Cp4.1LG01g16660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 15..251
score: 2.7
NoneNo IPR availableGENE3DG3DSA:2.60.120.620coord: 79..272
score: 4.8E-72coord: 6..44
score: 4.8
NoneNo IPR availablePANTHERPTHR20883PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1coord: 1..281
score: 8.2E
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 7..273
score: 8.88

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g16660CmaCh04G018750Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g16660CmoCh04G019740Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g16660Bhi07G000114Wax gourdcpewgoB0577
Cp4.1LG01g16660Carg25930Silver-seed gourdcarcpeB0492
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g16660Melon (DHL92) v3.6.1cpemedB424
Cp4.1LG01g16660Cucumber (Chinese Long) v3cpecucB0555
Cp4.1LG01g16660Cucumber (Gy14) v1cgycpeB0641
Cp4.1LG01g16660Wild cucumber (PI 183967)cpecpiB428
Cp4.1LG01g16660Wild cucumber (PI 183967)cpecpiB471
Cp4.1LG01g16660Cucumber (Chinese Long) v2cpecuB471
Cp4.1LG01g16660Bottle gourd (USVL1VR-Ls)cpelsiB337
Cp4.1LG01g16660Watermelon (Charleston Gray)cpewcgB341
Cp4.1LG01g16660Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g16660Watermelon (Charleston Gray)cpewcgB369
Cp4.1LG01g16660Watermelon (97103) v1cpewmB377
Cp4.1LG01g16660Watermelon (97103) v1cpewmB455