Cp4.1LG01g16370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTCP family transcription factor
LocationCp4.1LG01 : 10011320 .. 10013091 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGGTGGTGGTTAATAAGCAACCTCCATTAATTAACCTTCCCTTCTCTCTCTCTCTCTTCCCTGGGTATTCATAGACATAGCAGAGGTAGGGAAGAGCCATGATCAACGCCTCAAACGCATAGCTCAAGAACACCAACAAGAACAACAAGAACAACAACAATCACCAAAGTATAAAGCAGCAAAGTGAATGGAACTTACAGATATGCAGCAAAGCAACAAGCAGCAGCAGCAGCAGCAGCAGCATCATCACCATTCAAACCAGAACCAGAAGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCATCATGTGGTCCCTTTCGATGGCAGATCAGCCGCTGCAGGAGGTGGTCCACCGTTCATGGGCTCCATCTCCACTCTTGTCTCCCTCCCTCCTCCTTCTTCCTCTGCTTCTAATTCTACTTCTAATTCTTCTTCTTCTTCCTCTTCCTCCGCCGTTGCTCCGCCTCCTCACCTCCTCGATGCCTCACTCGTCATCGCTACCAGATCCGATACCACCACTAATCCTTCTCCCCGATCTGCCTCTGCCTCCGCCTCCACCTCCAACGCTAACGCTCTCAAGCGTTCCACTAAAGATCGGCATACTAAGGTCGATGGTCGTGGCCGACGCATCCGTATGCCGGCTACTTGTGCGGCTAGGGTTTTCCAATTGACCCGCGAATTGGGGCATAAGTCCGACGGCGAGACTATCGAGTGGCTTCTCCAGCAAGCTGAGCCTGCGATTATTGCCGCCACTGGTACTGGAACAATCCCTGCTAATTTTTCCTCCTTGAACATTTCCATTCGTAGCAGTGGATCCACTCTCTCTGCTCCTCCCTCAAAATCTGCTCCTCATTCCTTCCATGGCGCTTTGGCTCTCGCTCATCATCCCAACGCCTACGAGGAAGGCTTCGCTCATGCTGCTCTGCTAGGGTTTCACCACCACCACCACCATCAGCAACAGCAGCAGCACCACCACCAACTTAATCTAATGACCGCCGATCAAATTGCCGACGCTCTCCCCGGCGGCGAGAGCGGCGGCGGAGGAGGAGGAGGAGACTCGACGGATAACTATATGAGAAAACGCTACAGAGAAGACCTGTTTAAAGAGGACACGCAATCTCCAGGGGAGAGCAGCGGCGGTGCTGGATCTCCCAAAGCGATTAAGAGCGATCTGCAATTAGAGAAACAACAATCGCAGCAACAATCAGCATCCTCGAGCCTACTCCGTCCTGCGACGGCGATGTGGGCCGTGGCTCCAAGCAGTGGAGCGAGCAACACGTTTTGGATGTTGCCAGTAACAACAGGATCAGGCGGAGCAAATGTAGGAAGCTCTGGAGCAAGCGGTGGTCCAATGGAAGCTCAAATGTGGCCATTCTCAACGAGTGCAAACACATTGCAGGCTCCATTGCATTTCATGCCAAGATTCAACATCCCTGGAGGCGTCGAAATTCAGGCGGCAGGTGCGGCAGCAGGAGGCGGAGGAAGAGCCGGCCAATTACAACTCGGTTCCATGCTAATGCATCAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCTTGGGCTGGGAGTATCAGAGTCCAATTTGGGAGTGTTAGCAGCTCTGAATGCTGCGTATTCCAGAGGCGGATTCAATGCTAATTCAGATCATCACCATAATCATCATCCATTGGAGCATCATTCCAACGCACCACAGCCTCACGCAACCGATAGTGGGGACGAAGATCCAAACACTTCCCAGTGA

mRNA sequence

ATGGTGCAAAGCAACAAGCAGCAGCAGCAGCAGCAGCAGCATCATCACCATTCAAACCAGAACCAGAAGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCATCATGTGGTCCCTTTCGATGGCAGATCAGCCGCTGCAGGAGGTGGTCCACCCAGTGGATCCACTCTCTCTGCTCCTCCCTCAAAATCTGCTCCTCATTCCTTCCATGGCGCTTTGGCTCTCGCTCATCATCCCAACGCCTACGAGGAAGGCTTCGCTCATGCTGCTCTGCTAGGGTTTCACCACCACCACCACCATCAGCAACAGCAGCAGCACCACCACCAACTTAATCTAATGACCGCCGATCAAATTGCCGACGCTCTCCCCGGCGGCGAGAGCGGCGGCGGAGGAGGAGGAGGAGACTCGACGGATAACTATATGAGAAAACGCTACAGAGAAGACCTGTTTAAAGAGGACACGCAATCTCCAGGGGAGAGCAGCGGCGGTGCTGGATCTCCCAAAGCGATTAAGAGCGATCTGCAATTAGAGAAACAACAATCGCAGCAACAATCAGCATCCTCGAGCCTACTCCGTCCTGCGACGGCGATGTGGGCCGTGGCTCCAAGCAGTGGAGCGAGCAACACGTTTTGGATGTTGCCAGTAACAACAGGATCAGGCGGAGCAAATGTAGGAAGCTCTGGAGCAAGCGGTGGTCCAATGGAAGCTCAAATGTGGCCATTCTCAACGAGTGCAAACACATTGCAGGCTCCATTGCATTTCATGCCAAGATTCAACATCCCTGGAGGCGTCGAAATTCAGGCGGCAGGTGCGGCAGCAGGAGGCGGAGGAAGAGCCGGCCAATTACAACTCGGTTCCATGCTAATGCATCAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCTTGGGCTGGGAGTATCAGAGTCCAATTTGGGAGTGTTAGCAGCTCTGAATGCTGCGTATTCCAGAGGCGGATTCAATGCTAATTCAGATCATCACCATAATCATCATCCATTGGAGCATCATTCCAACGCACCACAGCCTCACGCAACCGATAGTGGGGACGAAGATCCAAACACTTCCCAGTGA

Coding sequence (CDS)

ATGGTGCAAAGCAACAAGCAGCAGCAGCAGCAGCAGCAGCATCATCACCATTCAAACCAGAACCAGAAGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCATCATGTGGTCCCTTTCGATGGCAGATCAGCCGCTGCAGGAGGTGGTCCACCCAGTGGATCCACTCTCTCTGCTCCTCCCTCAAAATCTGCTCCTCATTCCTTCCATGGCGCTTTGGCTCTCGCTCATCATCCCAACGCCTACGAGGAAGGCTTCGCTCATGCTGCTCTGCTAGGGTTTCACCACCACCACCACCATCAGCAACAGCAGCAGCACCACCACCAACTTAATCTAATGACCGCCGATCAAATTGCCGACGCTCTCCCCGGCGGCGAGAGCGGCGGCGGAGGAGGAGGAGGAGACTCGACGGATAACTATATGAGAAAACGCTACAGAGAAGACCTGTTTAAAGAGGACACGCAATCTCCAGGGGAGAGCAGCGGCGGTGCTGGATCTCCCAAAGCGATTAAGAGCGATCTGCAATTAGAGAAACAACAATCGCAGCAACAATCAGCATCCTCGAGCCTACTCCGTCCTGCGACGGCGATGTGGGCCGTGGCTCCAAGCAGTGGAGCGAGCAACACGTTTTGGATGTTGCCAGTAACAACAGGATCAGGCGGAGCAAATGTAGGAAGCTCTGGAGCAAGCGGTGGTCCAATGGAAGCTCAAATGTGGCCATTCTCAACGAGTGCAAACACATTGCAGGCTCCATTGCATTTCATGCCAAGATTCAACATCCCTGGAGGCGTCGAAATTCAGGCGGCAGGTGCGGCAGCAGGAGGCGGAGGAAGAGCCGGCCAATTACAACTCGGTTCCATGCTAATGCATCAACAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAGCTTGGGCTGGGAGTATCAGAGTCCAATTTGGGAGTGTTAGCAGCTCTGAATGCTGCGTATTCCAGAGGCGGATTCAATGCTAATTCAGATCATCACCATAATCATCATCCATTGGAGCATCATTCCAACGCACCACAGCCTCACGCAACCGATAGTGGGGACGAAGATCCAAACACTTCCCAGTGA

Protein sequence

MVQSNKQQQQQQQHHHHSNQNQKPPPPPPPPQQQQQQQHHVVPFDGRSAAAGGGPPSGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIKSDLQLEKQQSQQQSASSSLLRPATAMWAVAPSSGASNTFWMLPVTTGSGGANVGSSGASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNANSDHHHNHHPLEHHSNAPQPHATDSGDEDPNTSQ
Homology
[Close]
BLAST of Cp4.1LG01g16370 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 121/335 (36.12%), Postives = 153/335 (45.67%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEG----FAHAA-LLGFHHH-HHHQQQQQH 116
           SGSTLSAPPSKS P   +GAL L HH    + G     AH + LLGFHH   HHQ Q Q+
Sbjct: 134 SGSTLSAPPSKSVP--LYGALGLTHHQYDEQGGGGVFAAHTSPLLGFHHQLQHHQNQNQN 193

Query: 117 HHQLNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYRE-DLFKEDTQSPGESSGGAG 176
              +         + +P GE            N+ RKRYR  DL KE+            
Sbjct: 194 QDPV---------ETIPEGE------------NFSRKRYRSVDLSKEN------------ 253

Query: 177 SPKAIKSDLQLEKQQSQQQSASSSLLRPATAMWAVAPSS--GASNTFWMLPVTTGSGGAN 236
                  D +  + +S ++S +S     A  MWAVAP S  GA NTFWMLPV T +G   
Sbjct: 254 ------DDRKQNENKSLKESETSG--PTAAPMWAVAPPSRSGAGNTFWMLPVPTTAGNQM 313

Query: 237 VGSSG--ASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAAGGGGRAGQ 296
             SS    + G     MWPF  SA                        G A GGGG A  
Sbjct: 314 ESSSNNNTAAGHRAPPMWPFVNSAG-----------------------GGAGGGGGAATH 373

Query: 297 LQLGSMLMHQQQQQQ----------QQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNA 356
              G+       Q +           Q Q  Q LGL + +SNLG+LAALN+AYSRGG NA
Sbjct: 374 FMAGTGFSFPMDQYRGSPLQLGSFLAQPQPTQNLGLSMPDSNLGMLAALNSAYSRGG-NA 401

Query: 357 NSDHHHNHHPLEHHSNAPQ-PHATDSGDEDPNTSQ 370
           N++    ++ +EH     Q  H  DS +E+ N+S+
Sbjct: 434 NANAEQANNAVEHQEKQQQSDHDDDSREENSNSSE 401

[Close]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match: A0A0A0KPT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587110 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-92
Identity = 212/297 (71.38%), Postives = 223/297 (75.08%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGA-LALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLN 116
           SGSTLSAPPSKSAPHSFHGA LALAHHP+AYEEGFAHAALLGF    HHQQQQQ  H LN
Sbjct: 122 SGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGF----HHQQQQQQQHHLN 181

Query: 117 LMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIK 176
           LMTADQI + LP        GGG+STDNYMRKR+REDLFKEDTQSPGESSGG GSPKA+K
Sbjct: 182 LMTADQIGEGLP-------SGGGESTDNYMRKRFREDLFKEDTQSPGESSGGGGSPKAMK 241

Query: 177 SDLQLEKQQSQQQSASSSLLRPATAMWAVA---PSSGASNTFWMLPVTTGSGGANVGSS- 236
           +DLQLEKQQ Q  ++SS LLRP  AMWAVA   PSSGASNTFWMLPVT GSGG NVG+S 
Sbjct: 242 TDLQLEKQQQQPSASSSGLLRPGAAMWAVAAPGPSSGASNTFWMLPVTAGSGGGNVGNSS 301

Query: 237 --------GASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAA------ 296
                   G  GG    QMWPFSTS NTLQAPLH MPRFNIPGGVEIQAA AAA      
Sbjct: 302 GGGGGGGGGGDGGLEAHQMWPFSTSGNTLQAPLHLMPRFNIPGGVEIQAAAAAAAAAAAA 361

Query: 297 -GGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAY-SRGG 333
            GG G  GQLQLGSMLM       QQ       GLGVSE+NLG+LAALNAAY SR G
Sbjct: 362 GGGRGGGGQLQLGSMLM-------QQAAGGGGGGLGVSETNLGMLAALNAAYNSRSG 400

[Close]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match: M5XQQ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022140mg PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 206/341 (60.41%), Postives = 236/341 (69.21%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHH---- 116
           SGSTLSAPPSKSA HSF GALALAHHP+ Y+EGF H+ LLGFH HH   QQQ HHH    
Sbjct: 194 SGSTLSAPPSKSASHSFPGALALAHHPH-YDEGFPHSGLLGFHQHHQQHQQQHHHHHHQQ 253

Query: 117 -QLNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGE-SSGGAGS 176
            Q  LMTADQIA+ALP G  GG  GGGDSTD+YMRKR+REDLFK+D Q  GE SSGG GS
Sbjct: 254 HQSPLMTADQIAEALPSG--GGDSGGGDSTDSYMRKRFREDLFKDDNQGRGEGSSGGGGS 313

Query: 177 P--KAIKSD--LQLEKQQ--SQQQSASSSLLRPA------TAMWAVAP---SSGASNTFW 236
           P  KA KS   LQL+KQQ  S+ ++  S LLRP       TAMWAVAP   S  A +TFW
Sbjct: 314 PSGKAFKSSGGLQLQKQQQGSEGEAGPSGLLRPPSNILPPTAMWAVAPAPNSGAAGSTFW 373

Query: 237 MLPVTTGSGGANVGSSGASGGPMEA-QMWPF----STSANTLQAPLHFMPRFNIPGGVEI 296
           MLPVT G+GG ++ +  +  GP EA QMW F    +T  +TLQAPLHFMPRFN+P  +E 
Sbjct: 374 MLPVTAGAGGPSMPTGTSGAGPSEAAQMWTFPSAPATHGSTLQAPLHFMPRFNLPSSLEF 433

Query: 297 QAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSR 356
           Q AG+      R   LQLGSMLM        QQQ  Q LGLGV++SNLG+LAALNA+YSR
Sbjct: 434 QQAGS------RGSPLQLGSMLM--------QQQPSQHLGLGVADSNLGMLAALNASYSR 493

Query: 357 GGFNANSDHHHNHHPLEHHSNAP--QPHATDSGDEDPNTSQ 370
           GG N NS+HH  +HPL+HH      QP  TDSGDE PN+SQ
Sbjct: 494 GGLNMNSEHHQQNHPLDHHHQQQHHQPQTTDSGDEAPNSSQ 517

[Close]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match: D9ZJC7_MALDO (TCP domain class transcription factor OS=Malus domestica GN=TCP11 PE=2 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80
Identity = 210/344 (61.05%), Postives = 235/344 (68.31%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLN- 116
           SGSTLSAPPSKSAPHSF GALALAHHP+ Y+EGFAH+ LLGFH  H  QQ QQHHHQ + 
Sbjct: 59  SGSTLSAPPSKSAPHSFPGALALAHHPH-YDEGFAHSGLLGFHQQHQQQQHQQHHHQPHQ 118

Query: 117 --LMTADQIADALP-GGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSG--GAGS 176
             LMTADQIA+ALP GG    GGGGG+ST+NYMRKR+REDLFK+D Q  GES    G GS
Sbjct: 119 SPLMTADQIAEALPSGGGDSAGGGGGESTENYMRKRFREDLFKDDNQGQGESGSGDGGGS 178

Query: 177 P---KAIK----SDLQLEKQQSQ-QQSASSSLLR-----PATAMWAV--APSSGASNTFW 236
           P   KA K      LQL KQQ Q  +  SS +LR     PATAMWAV  AP+SG  NTFW
Sbjct: 179 PSRNKAFKGASSGGLQLPKQQQQGAEVGSSGVLRPSSILPATAMWAVAPAPTSGTGNTFW 238

Query: 237 MLPVTTGSGGANVGSSGASGGPME-AQMWPFSTS----ANTLQAPLHFMPRFNIPGGVEI 296
           MLPVT G G  ++ ++    GP E AQMW F +S     +TLQAP+HFMPRFN+P  +E 
Sbjct: 239 MLPVTAGPGVPSMATATFGAGPSEAAQMWTFPSSTASHGSTLQAPMHFMPRFNLPSSLEF 298

Query: 297 QAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSR 356
           Q A A    GGR   LQLGSMLM        QQ   Q LGLGVS+SNLG+LAALN AYSR
Sbjct: 299 QQAAA----GGRGSPLQLGSMLM--------QQPPSQHLGLGVSDSNLGMLAALN-AYSR 358

Query: 357 GGFNANSD-HHHN-HHPLEHH---SNAPQPHATDSGDEDPNTSQ 370
           GG N NSD H HN HHPL+HH       QP  TDSGDE PN+SQ
Sbjct: 359 GGLNMNSDQHQHNHHHPLDHHHQEQQQHQPQTTDSGDEAPNSSQ 388

[Close]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match: A0A061DWY9_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_006249 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 7.0e-80
Identity = 206/334 (61.68%), Postives = 229/334 (68.56%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALA--HHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQL 116
           SGSTLSAPPSKSAPHSFHGALALA  HH + YEEGFA +ALLGFHH    QQQQQ     
Sbjct: 248 SGSTLSAPPSKSAPHSFHGALALASHHHHHPYEEGFAQSALLGFHHQQQQQQQQQ----- 307

Query: 117 NLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGA------ 176
            L+TADQIA+ALPG     GG  G+S++NYMRKR+REDLFK+D Q  GES  G       
Sbjct: 308 QLLTADQIAEALPG---AAGGDSGNSSENYMRKRFREDLFKDDNQQQGESGSGGGGGSGD 367

Query: 177 GSP-KAIKSDL-QLEKQQSQQQSASSSLLR-----PATAMWAV--APSSGASNTFWMLPV 236
           GSP KA KS L QL K   QQ + SS LLR     PATAMWAV  APSSGA +TFWMLPV
Sbjct: 368 GSPIKAFKSGLGQLPK--PQQDAGSSGLLRPSNILPATAMWAVAPAPSSGAGSTFWMLPV 427

Query: 237 TTGSGGANVGSSGASGGPMEAQMWPFST----SANTLQAPLHFMPRFNIPGGVEIQAAGA 296
           T G+GG +V +  +  GP E QMWPF T    S NTLQAPLHF+PRFN+PG VE Q    
Sbjct: 428 TAGAGGPSVATGASGAGPSEPQMWPFGTPGPASGNTLQAPLHFVPRFNLPGSVEFQ---- 487

Query: 297 AAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNA 356
               GGR   LQLGSMLM        QQQ  Q LGLG+SESNLG+LAALN AYSRGG N 
Sbjct: 488 ----GGRPSPLQLGSMLM--------QQQPSQHLGLGMSESNLGMLAALN-AYSRGGSNI 547

Query: 357 NSDHHHNHHPLEHHSNAPQPHATDSGDEDPNTSQ 370
           NS+    ++PLEHH +  QP  TDSGDEDPN SQ
Sbjct: 548 NSE---QNNPLEHHQH--QPQGTDSGDEDPNNSQ 549

[Close]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match: A0A0D2QGT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G215000 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.6e-79
Identity = 210/334 (62.87%), Postives = 237/334 (70.96%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALA---HHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQ 116
           SGSTLSAPPSKSAPHSFHGALALA   HH + YEEGFAH+ALLGF        QQQH   
Sbjct: 249 SGSTLSAPPSKSAPHSFHGALALASHHHHHHPYEEGFAHSALLGF--------QQQH--- 308

Query: 117 LNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGE--SSGGAGSP 176
             L+TADQIA+ALPGG   GGG GG+ ++NYMRKR+REDLFK+D Q  GE  S GG GSP
Sbjct: 309 --LLTADQIAEALPGG---GGGDGGNLSENYMRKRFREDLFKDDDQQQGESGSGGGDGSP 368

Query: 177 -KAIKSDL-QLEKQQSQQQSASSSLLRPA-----TAMWAV--APSSGASNTFWMLPVTTG 236
            KA KS L QL K   QQ + SS+L RP+     TAMWAV  APSSGA +TFWMLP++ G
Sbjct: 369 IKAFKSGLTQLSK--PQQDAGSSALPRPSNILPGTAMWAVAPAPSSGAGSTFWMLPMSAG 428

Query: 237 SGGANVGSSGASG-GPME-AQMWPFST----SANTLQAPLHFMPRFNIPGGVEIQAAGAA 296
           +GG +V  S A+G GP +  QMWPF T    S NTLQAPLHF+PRFN+PG VE Q     
Sbjct: 429 AGGPSVAPSAATGAGPSDHPQMWPFGTANQASGNTLQAPLHFLPRFNLPGNVEFQ----- 488

Query: 297 AGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNAN 356
              GGRA  LQLGSMLM   QQQQQQQQ    LGLG+S+SNLG+LAALN AYSRGG N N
Sbjct: 489 ---GGRASPLQLGSMLM---QQQQQQQQPHHHLGLGMSDSNLGMLAALN-AYSRGGSNVN 548

Query: 357 SDHHHNHHPLEHHSNAPQPHATDSG-DEDPNTSQ 370
           SD    ++PLEHH    QP  TDSG D+DPNTSQ
Sbjct: 549 SD---QNNPLEHHHQQHQPQGTDSGDDQDPNTSQ 549

[Close]
BLAST of Cp4.1LG01g16370 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 121/335 (36.12%), Postives = 153/335 (45.67%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEG----FAHAA-LLGFHHH-HHHQQQQQH 116
           SGSTLSAPPSKS P   +GAL L HH    + G     AH + LLGFHH   HHQ Q Q+
Sbjct: 134 SGSTLSAPPSKSVP--LYGALGLTHHQYDEQGGGGVFAAHTSPLLGFHHQLQHHQNQNQN 193

Query: 117 HHQLNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYRE-DLFKEDTQSPGESSGGAG 176
              +         + +P GE            N+ RKRYR  DL KE+            
Sbjct: 194 QDPV---------ETIPEGE------------NFSRKRYRSVDLSKEN------------ 253

Query: 177 SPKAIKSDLQLEKQQSQQQSASSSLLRPATAMWAVAPSS--GASNTFWMLPVTTGSGGAN 236
                  D +  + +S ++S +S     A  MWAVAP S  GA NTFWMLPV T +G   
Sbjct: 254 ------DDRKQNENKSLKESETSG--PTAAPMWAVAPPSRSGAGNTFWMLPVPTTAGNQM 313

Query: 237 VGSSG--ASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAAGGGGRAGQ 296
             SS    + G     MWPF  SA                        G A GGGG A  
Sbjct: 314 ESSSNNNTAAGHRAPPMWPFVNSAG-----------------------GGAGGGGGAATH 373

Query: 297 LQLGSMLMHQQQQQQ----------QQQQQQQQLGLGVSESNLGVLAALNAAYSRGGFNA 356
              G+       Q +           Q Q  Q LGL + +SNLG+LAALN+AYSRGG NA
Sbjct: 374 FMAGTGFSFPMDQYRGSPLQLGSFLAQPQPTQNLGLSMPDSNLGMLAALNSAYSRGG-NA 401

Query: 357 NSDHHHNHHPLEHHSNAPQ-PHATDSGDEDPNTSQ 370
           N++    ++ +EH     Q  H  DS +E+ N+S+
Sbjct: 434 NANAEQANNAVEHQEKQQQSDHDDDSREENSNSSE 401

[Close]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match: gi|659090395|ref|XP_008445993.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8 [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 6.4e-103
Identity = 243/341 (71.26%), Postives = 254/341 (74.49%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGA-LALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLN 116
           SGSTLSAPPSKSAPHSFHGA LALAHHP+AYEEGFAHAALLGF    HHQQQQQ  HQLN
Sbjct: 202 SGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGF----HHQQQQQQQHQLN 261

Query: 117 LMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIK 176
           LMTADQI + LP       GGGG+STDNYMRKR+REDLFKEDTQSPGESSGG GSPKA+K
Sbjct: 262 LMTADQIGEGLP------SGGGGESTDNYMRKRFREDLFKEDTQSPGESSGGGGSPKAMK 321

Query: 177 SDLQLEKQQSQQQSASSS--LLRPATAMWAVA---PSSGASNTFWMLPVTTGSGGANVGS 236
           SDLQLEKQQ QQ SASSS  LLRP  AMWAVA   PSSGASNTFWMLPVT GSGG NVG+
Sbjct: 322 SDLQLEKQQQQQPSASSSSGLLRPGAAMWAVATPGPSSGASNTFWMLPVTAGSGGGNVGN 381

Query: 237 S---------GASGGPMEA-QMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAAGGG 296
           S         G  GG +EA QMWPFSTS NTLQAPLH MPRFNIPGGVEIQAA AA GG 
Sbjct: 382 SSGGGSGGGGGGGGGGLEAHQMWPFSTSGNTLQAPLHLMPRFNIPGGVEIQAA-AAGGGR 441

Query: 297 GRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAY---SRGGFNANS 356
           G  GQLQLGSMLM      QQ        GLGVSE+NLG+LAALNAAY   S  G N NS
Sbjct: 442 GGGGQLQLGSMLM------QQATGGGGGGGLGVSETNLGMLAALNAAYNSRSGSGSNINS 501

Query: 357 D-----HHHNHHPLEHHSNAPQPHAT----DSGDEDPNTSQ 370
           D     HHH+HHP  H  N   PH T    +SGDE PNTSQ
Sbjct: 502 DNHSLEHHHHHHPHSHPHNPHHPHNTNTDHNSGDEAPNTSQ 525

[Close]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match: gi|778704490|ref|XP_011655544.1| (PREDICTED: transcription factor TCP8 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-98
Identity = 232/346 (67.05%), Postives = 247/346 (71.39%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGA-LALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLN 116
           SGSTLSAPPSKSAPHSFHGA LALAHHP+AYEEGFAHAALLGF    HHQQQQQ  H LN
Sbjct: 209 SGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGF----HHQQQQQQQHHLN 268

Query: 117 LMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIK 176
           LMTADQI + LP        GGG+STDNYMRKR+REDLFKEDTQSPGESSGG GSPKA+K
Sbjct: 269 LMTADQIGEGLP-------SGGGESTDNYMRKRFREDLFKEDTQSPGESSGGGGSPKAMK 328

Query: 177 SDLQLEKQQSQQQSASSSLLRPATAMWAVA---PSSGASNTFWMLPVTTGSGGANVGSS- 236
           +DLQLEKQQ Q  ++SS LLRP  AMWAVA   PSSGASNTFWMLPVT GSGG NVG+S 
Sbjct: 329 TDLQLEKQQQQPSASSSGLLRPGAAMWAVAAPGPSSGASNTFWMLPVTAGSGGGNVGNSS 388

Query: 237 --------GASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAA------ 296
                   G  GG    QMWPFSTS NTLQAPLH MPRFNIPGGVEIQAA AAA      
Sbjct: 389 GGGGGGGGGGDGGLEAHQMWPFSTSGNTLQAPLHLMPRFNIPGGVEIQAAAAAAAAAAAA 448

Query: 297 -GGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAY---SRGGF 356
            GG G  GQLQLGSMLM       QQ       GLGVSE+NLG+LAALNAAY   S  GF
Sbjct: 449 GGGRGGGGQLQLGSMLM-------QQAAGGGGGGLGVSETNLGMLAALNAAYNSRSGSGF 508

Query: 357 NANSDHH-------HNHHPLEHHSNAPQPHAT---DSGDEDPNTSQ 370
           N NSD+H       H HH   HH + P  +     +SGDE PNTSQ
Sbjct: 509 NINSDNHPLEHQHQHQHHHHHHHHHNPAHNTNTDHNSGDEAPNTSQ 536

[Close]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match: gi|700196463|gb|KGN51640.1| (hypothetical protein Csa_5G587110 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 3.0e-92
Identity = 212/297 (71.38%), Postives = 223/297 (75.08%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGA-LALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLN 116
           SGSTLSAPPSKSAPHSFHGA LALAHHP+AYEEGFAHAALLGF    HHQQQQQ  H LN
Sbjct: 122 SGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGF----HHQQQQQQQHHLN 181

Query: 117 LMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESSGGAGSPKAIK 176
           LMTADQI + LP        GGG+STDNYMRKR+REDLFKEDTQSPGESSGG GSPKA+K
Sbjct: 182 LMTADQIGEGLP-------SGGGESTDNYMRKRFREDLFKEDTQSPGESSGGGGSPKAMK 241

Query: 177 SDLQLEKQQSQQQSASSSLLRPATAMWAVA---PSSGASNTFWMLPVTTGSGGANVGSS- 236
           +DLQLEKQQ Q  ++SS LLRP  AMWAVA   PSSGASNTFWMLPVT GSGG NVG+S 
Sbjct: 242 TDLQLEKQQQQPSASSSGLLRPGAAMWAVAAPGPSSGASNTFWMLPVTAGSGGGNVGNSS 301

Query: 237 --------GASGGPMEAQMWPFSTSANTLQAPLHFMPRFNIPGGVEIQAAGAAA------ 296
                   G  GG    QMWPFSTS NTLQAPLH MPRFNIPGGVEIQAA AAA      
Sbjct: 302 GGGGGGGGGGDGGLEAHQMWPFSTSGNTLQAPLHLMPRFNIPGGVEIQAAAAAAAAAAAA 361

Query: 297 -GGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAY-SRGG 333
            GG G  GQLQLGSMLM       QQ       GLGVSE+NLG+LAALNAAY SR G
Sbjct: 362 GGGRGGGGQLQLGSMLM-------QQAAGGGGGGLGVSETNLGMLAALNAAYNSRSG 400

[Close]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match: gi|1009169623|ref|XP_015865766.1| (PREDICTED: transcription factor TCP8-like [Ziziphus jujuba])

HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83
Identity = 220/353 (62.32%), Postives = 238/353 (67.42%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHHQLNL 116
           SGSTLSAPPSKSAPHSFHG LALAHHP+ Y+EGFAHA LLGF           H HQ  L
Sbjct: 261 SGSTLSAPPSKSAPHSFHGTLALAHHPH-YDEGFAHAGLLGF-----------HQHQPPL 320

Query: 117 MTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGESS--GGAGSP--- 176
           MTADQIA+ LP G  G GGGG  +TDNYMRKR+REDLFKE++Q   E+S  GG GSP   
Sbjct: 321 MTADQIAEVLPSG-GGDGGGGESTTDNYMRKRFREDLFKEESQGQAEASAGGGGGSPSSN 380

Query: 177 KAIKSDLQLEKQQSQQQ-----------SASSSLLR-----PATAMWAV--APSSGASNT 236
           KA KS LQL KQQ QQQ            ASS LLR     PATAMWAV  AP+SGA +T
Sbjct: 381 KAFKSGLQLPKQQQQQQQQQQQQEAAAGGASSGLLRPSNIMPATAMWAVTPAPTSGAGST 440

Query: 237 FWMLPVTTGSGGANVGSSGASG-GPME-AQMWPFSTS-----ANTLQAPLHFMPRFNIP- 296
           FWMLPVT G+GG +   +G SG GP E   MW F T+      NTLQAPLHFMPRFN+P 
Sbjct: 441 FWMLPVTAGAGGPSTVGAGTSGAGPSEQPHMWTFPTTPASSHGNTLQAPLHFMPRFNLPH 500

Query: 297 --GGVEIQAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAA 356
             G +E Q      GG G    LQLGSMLM  QQQQQQQQQ  QQLGLGVSESNLG+LAA
Sbjct: 501 HTGNLEFQ------GGRGGNHPLQLGSMLM--QQQQQQQQQPSQQLGLGVSESNLGMLAA 560

Query: 357 LNAAYSRGGFNANSDHHHNHHPLEHH-------SNAPQPHATDSGDEDPNTSQ 370
           LN AYSRGG N NSDHH N HPLEHH           QP  TDSGDEDPN+SQ
Sbjct: 561 LN-AYSRGGLNINSDHHQN-HPLEHHHHQHQQQQQQQQPQTTDSGDEDPNSSQ 590

[Close]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match: gi|596295678|ref|XP_007227045.1| (hypothetical protein PRUPE_ppa022140mg [Prunus persica])

HSP 1 Score: 315.1 bits (806), Expect = 1.6e-82
Identity = 206/341 (60.41%), Postives = 236/341 (69.21%), Query Frame = 1 

Query: 57  SGSTLSAPPSKSAPHSFHGALALAHHPNAYEEGFAHAALLGFHHHHHHQQQQQHHH---- 116
           SGSTLSAPPSKSA HSF GALALAHHP+ Y+EGF H+ LLGFH HH   QQQ HHH    
Sbjct: 194 SGSTLSAPPSKSASHSFPGALALAHHPH-YDEGFPHSGLLGFHQHHQQHQQQHHHHHHQQ 253

Query: 117 -QLNLMTADQIADALPGGESGGGGGGGDSTDNYMRKRYREDLFKEDTQSPGE-SSGGAGS 176
            Q  LMTADQIA+ALP G  GG  GGGDSTD+YMRKR+REDLFK+D Q  GE SSGG GS
Sbjct: 254 HQSPLMTADQIAEALPSG--GGDSGGGDSTDSYMRKRFREDLFKDDNQGRGEGSSGGGGS 313

Query: 177 P--KAIKSD--LQLEKQQ--SQQQSASSSLLRPA------TAMWAVAP---SSGASNTFW 236
           P  KA KS   LQL+KQQ  S+ ++  S LLRP       TAMWAVAP   S  A +TFW
Sbjct: 314 PSGKAFKSSGGLQLQKQQQGSEGEAGPSGLLRPPSNILPPTAMWAVAPAPNSGAAGSTFW 373

Query: 237 MLPVTTGSGGANVGSSGASGGPMEA-QMWPF----STSANTLQAPLHFMPRFNIPGGVEI 296
           MLPVT G+GG ++ +  +  GP EA QMW F    +T  +TLQAPLHFMPRFN+P  +E 
Sbjct: 374 MLPVTAGAGGPSMPTGTSGAGPSEAAQMWTFPSAPATHGSTLQAPLHFMPRFNLPSSLEF 433

Query: 297 QAAGAAAGGGGRAGQLQLGSMLMHQQQQQQQQQQQQQQLGLGVSESNLGVLAALNAAYSR 356
           Q AG+      R   LQLGSMLM        QQQ  Q LGLGV++SNLG+LAALNA+YSR
Sbjct: 434 QQAGS------RGSPLQLGSMLM--------QQQPSQHLGLGVADSNLGMLAALNASYSR 493

Query: 357 GGFNANSDHHHNHHPLEHHSNAP--QPHATDSGDEDPNTSQ 370
           GG N NS+HH  +HPL+HH      QP  TDSGDE PN+SQ
Sbjct: 494 GGLNMNSEHHQQNHPLDHHHQQQHHQPQTTDSGDEAPNSSQ 517

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP8_ARATH2.0e-1936.12Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1[more]
BLAST of Cp4.1LG01g16370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPT3_CUCSA2.1e-9271.38Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587110 PE=4 SV=1[more]
M5XQQ4_PRUPE1.1e-8260.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022140mg PE=4 SV=1[more]
D9ZJC7_MALDO1.4e-8061.05TCP domain class transcription factor OS=Malus domestica GN=TCP11 PE=2 SV=1[more]
A0A061DWY9_THECC7.0e-8061.68TCP family transcription factor OS=Theobroma cacao GN=TCM_006249 PE=4 SV=1[more]
A0A0D2QGT8_GOSRA2.6e-7962.87Uncharacterized protein OS=Gossypium raimondii GN=B456_002G215000 PE=4 SV=1[more]
BLAST of Cp4.1LG01g16370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G58100.11.1e-2036.12 TCP family transcription factor [more]
BLAST of Cp4.1LG01g16370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090395|ref|XP_008445993.1|6.4e-10371.26PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8 [Cucumis melo][more]
gi|778704490|ref|XP_011655544.1|1.6e-9867.05PREDICTED: transcription factor TCP8 [Cucumis sativus][more]
gi|700196463|gb|KGN51640.1|3.0e-9271.38hypothetical protein Csa_5G587110 [Cucumis sativus][more]
gi|1009169623|ref|XP_015865766.1|1.9e-8362.32PREDICTED: transcription factor TCP8-like [Ziziphus jujuba][more]
gi|596295678|ref|XP_007227045.1|1.6e-8260.41hypothetical protein PRUPE_ppa022140mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16370.1Cp4.1LG01g16370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 103..349
score: 2.1E-51coord: 57..66
score: 2.1
NoneNo IPR availablePANTHERPTHR31072:SF27SUBFAMILY NOT NAMEDcoord: 57..66
score: 2.1E-51coord: 103..349
score: 2.1