BLAST of Cp4.1LG01g15440 vs. Swiss-Prot
Match:
CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1)
HSP 1 Score: 716.5 bits (1848), Expect = 2.3e-205
Identity = 371/564 (65.78%), Postives = 442/564 (78.37%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSAS-TPSTPIPIPKY-PQPKSRILRTN------P 60
MA + SL ++LFSSLPS PP D SS + P+ PIPIPKY P ++R +TN P
Sbjct: 1 MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP 60
Query: 61 PKPP-NPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEI 120
KP NPALK H R++YYKPVK+GVISS GDR ++IGDSGVSY LP APFEFQ+SYSE
Sbjct: 61 KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET 120
Query: 121 PKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMP 180
PKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SKKKIP+FDSFNPPP G GVK VEMP
Sbjct: 121 PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 180
Query: 181 GPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSH 240
GP P G+YPKEG +REE+LGEPLK WE ML+KPH+ NRQVNLGRDG THNMLELIHSH
Sbjct: 181 GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSH 240
Query: 241 WKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPV 300
WKR+RVCKVRCKGVPTVDM+N+C LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRPQYP+
Sbjct: 241 WKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPL 300
Query: 301 MLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFE 360
MLWKPAAPVYPKLIQE PEGLT EEA+E R+KGK+L PICKL+KNGVY+SLV DVR AFE
Sbjct: 301 MLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFE 360
Query: 361 GSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATL 420
S LVKVDC G+ SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++WKS ++P +
Sbjct: 361 LSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNP--LI 420
Query: 421 PSQARTNDGESIENGD-----LLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPD 480
PS + TN ++ D N T +SPKM LW++A++S+KA++L E+ L PD
Sbjct: 421 PSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPD 480
Query: 481 DLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSS-DDDEDREGD 540
DLL+KVEE E S A EH+Y A+++S+ D ++ +D ++ +D E YS DDD D E
Sbjct: 481 DLLKKVEELEGTSLAAEHTYTAMVLSNTDGAA--EDYVDEKDRSEEYYSDIDDDFDDECS 540
Query: 541 LFDNVNPTVPMGSLPVDIIAKKLR 550
++++P P+GSLPVD I +KLR
Sbjct: 541 DDESLDPVGPVGSLPVDKIVRKLR 560
BLAST of Cp4.1LG01g15440 vs. Swiss-Prot
Match:
CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=3 SV=1)
HSP 1 Score: 531.6 bits (1368), Expect = 1.0e-149
Identity = 301/598 (50.33%), Postives = 392/598 (65.55%), Query Frame = 1
Query: 14 SSLPSAPPP-----HDPSSASTPSTPIPIPKYPQPKSRILRTNPPKPP-----NPALKTF 73
++L S+PPP +DP P+P + R PP P NPA +
Sbjct: 17 ANLFSSPPPPLPNCYDPKHRRPAPPPLPSARRLPSNRRRRHDQPPNPTTGNGGNPAFRAP 76
Query: 74 HRRSKYYKPVKDGVISSHGD-------------RAVVIGDSGVSYLLPDAPFEFQYSYSE 133
H R+ Y KPV + G+ RAVV+G SG+S+ LP APF+F++SYSE
Sbjct: 77 HLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFDFRFSYSE 136
Query: 134 IPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEM 193
P+ P+AIREPAFLPFAPPTMPRPWTGKAPL + ++K P G + + V
Sbjct: 137 CPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGEEAPRTVSA 196
Query: 194 PG---------PFPLGKY-PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGL 253
G L + P +G+SREE+LGEPL E+R LVKPH+SHNRQ+N+GRDGL
Sbjct: 197 HGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGL 256
Query: 254 THNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRN 313
THNMLE+IH HW+RQ +CKVRC+GVPTVDM N+C+HLEEK+GGK+IHRVGGV++L+RGRN
Sbjct: 257 THNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRN 316
Query: 314 YNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYI 373
YN RTRP+YP+MLWKPA PVYPKLIQEAPEGLT EEA+E+R +GK+LLPICKLAKNG+YI
Sbjct: 317 YNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKLAKNGIYI 376
Query: 374 SLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWK 433
LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPCVLLSFDNEQILM+RGK+WK
Sbjct: 377 YLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWK 436
Query: 434 SDISEDPSATLP---------SQARTNDGESIENGDLLHGNHQTIKTSPKMKLLWEKAID 493
S + P +P S ++ E+ ++ D L + ++ PKM LW AI+
Sbjct: 437 SRYPK-PLTLIPKIRKNNVPMSSDESSSDEATDDDDRL-AVREVLR--PKMFELWTNAIE 496
Query: 494 SNKALLLNEI---GLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPD------- 552
S+ AL+L++ L PD LL +VE+F SQ EHS+PA++++ +D S+PD
Sbjct: 497 SSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVA--NDESNPDVLNAEYT 556
BLAST of Cp4.1LG01g15440 vs. Swiss-Prot
Match:
CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1)
HSP 1 Score: 525.4 bits (1352), Expect = 7.5e-148
Identity = 292/600 (48.67%), Postives = 392/600 (65.33%), Query Frame = 1
Query: 11 HLFSSLPSAPPPHD----PSSASTPSTPIPIPKYPQPKSRILRTNPPKPP---------- 70
+LFS+ +PPP P S P P+ P+ PK + + +P
Sbjct: 18 NLFSA---SPPPLSNRRYPHHRSLPLPPVS-PRRRDPKKHSQQPSQEEPTDSGPTRTVTT 77
Query: 71 NPALKTFHRRSKYYKPVKDGVISSHGD-------------RAVVIGDSGVSYLLPDAPFE 130
NPA + H R+ Y KPV + G+ RAVV+G SG+S+ LP APF+
Sbjct: 78 NPAFRAAHLRTAYRKPVPPAAAAGEGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFD 137
Query: 131 FQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPL-----KSSKKKIPVFDSFNPP 190
FQ+SYSE P+ P+AIREPAFLPFAPPTMPRPWTGKAPL K+ ++ + +
Sbjct: 138 FQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQE 197
Query: 191 PPGTKGVKQVEMP----GPFPLGKY-PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQV 250
P T + M L + P +G+SREE+LGEPL E+R LVKPH+SHNRQ+
Sbjct: 198 TPQTVSAHGIMMEVRERRKMDLARVSPGDGRSREEVLGEPLTPSEVRALVKPHISHNRQL 257
Query: 251 NLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVL 310
N+GRDGLTHNMLE+IH HW+RQ +CKVRC+GVPTVDM N+C+HLEEK+GGK+IHRVGGV+
Sbjct: 258 NIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVV 317
Query: 311 YLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKL 370
+L+RGR+Y+ +TRP+YP+MLWKPA PVYPKLI+EAP+G T EEA+E+R KG++LLPICKL
Sbjct: 318 FLYRGRHYDPKTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMRRKGRDLLPICKL 377
Query: 371 AKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 430
AKNG+YI+LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPCVLLSFD+EQILM
Sbjct: 378 AKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILM 437
Query: 431 WRGKDWKSDISED-------PSATLPSQARTNDGESIENGDLLHGNHQTIKTSPKMKLLW 490
RGK+WKS S+ P L + N + + + + + ++ PKM LW
Sbjct: 438 HRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLR--PKMFKLW 497
Query: 491 EKAIDSNKALLLNEI---GLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSS----- 550
+ A+DS+ ALLL++ L PD LL VEEF SQA EHS+PAL++++ D S+
Sbjct: 498 KSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSA 557
Query: 551 -----SPDDNLESQDHDESNYSSD--DDEDREGDLFDNVNPTVPMGSLPVDIIAKKLRPE 552
P+ ++ + + S D DDE + D+F+ + +VP+GSLP+D + ++L E
Sbjct: 558 EYMNDEPETSVAGNEEGQLEQSPDLRDDEHFDVDMFERLESSVPLGSLPIDSMIERLNSE 611
BLAST of Cp4.1LG01g15440 vs. Swiss-Prot
Match:
CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1)
HSP 1 Score: 442.6 bits (1137), Expect = 6.4e-123
Identity = 214/380 (56.32%), Postives = 274/380 (72.11%), Query Frame = 1
Query: 25 PSSASTPSTPIPIPKYPQPKSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISSHGDR 84
P S + + + + QP + R P P +PA + R P+ + + G R
Sbjct: 18 PISRLPSNLRLSLSHHKQPAAVAKRRRAPAPSHPAFSSVIRGRPKKVPIPENGEPAAGVR 77
Query: 85 AVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKS 144
+ + G++Y L APFEFQYSY+E P+ +P+A+RE FLPF P PRPWTG+ PL
Sbjct: 78 ---VTERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPK 137
Query: 145 SKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKYPK-EGKSREEILGEPLKNWEIRMLV 204
S+K++P FDSF PPPG KGVK V+ PGPF G P+ + SREE+LGEPL E+ LV
Sbjct: 138 SRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELV 197
Query: 205 KPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGG 264
K L RQ+N+GRDGLTHNMLE IHSHWKR+RVCK++CKGV TVDMDN+C LEEK GG
Sbjct: 198 KATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGG 257
Query: 265 KIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMK 324
K+IH GGV++LFRGRNYNYRTRP YP+MLWKPAAPVYP+L+++ P+GLT +EA ++R +
Sbjct: 258 KVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKR 317
Query: 325 GKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVL 384
G+ L PICKL KNGVY++LV VR AFE LV+VDC+G+++SD +K+GAKLK+LVPC L
Sbjct: 318 GRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTL 377
Query: 385 LSFDNEQILMWRGKDWKSDI 404
LSF+ E ILMWRG DWKS +
Sbjct: 378 LSFEFEHILMWRGNDWKSSL 394
BLAST of Cp4.1LG01g15440 vs. Swiss-Prot
Match:
CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 2.1e-121
Identity = 217/384 (56.51%), Postives = 270/384 (70.31%), Query Frame = 1
Query: 25 PSSASTPSTPIPI----PKYPQPKSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISS 84
P+ S P P + + QP + R +PA R P+ D +
Sbjct: 14 PAQQSYPRLPASVRLCLSHHEQPPTGPKRHRRAATSHPAFSAAARGRAKKIPIADTDEPA 73
Query: 85 HGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKA 144
G R + D G+SY L APFEFQYSY+E P+ +P+A+RE F+PF P PRPWTG+
Sbjct: 74 AGVR---VTDRGISYRLDGAPFEFQYSYTEAPRARPVALREAPFMPFGPEATPRPWTGRK 133
Query: 145 PLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKYPK-EGKSREEILGEPLKNWEI 204
PL S+K++P FDSF P PG KGVK V+ PGPF G P+ + SRE+ILGEPL E+
Sbjct: 134 PLPKSRKELPEFDSFVLPAPGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLTKEEV 193
Query: 205 RMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEE 264
LVK L RQ+N+GRDGLTHNMLE IHSHWKR+RVCK++CKGV T+DMDNICH LEE
Sbjct: 194 SELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQLEE 253
Query: 265 KTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANE 324
K GGK+IHR GGV++LFRGRNYNYRTRP +P+MLWKP APVYP+L+ + P GLT +EA E
Sbjct: 254 KVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPDEATE 313
Query: 325 LRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELV 384
+R +G L PICKL KNGVY +LVN VR AFE LV+VDC+G+++SD +K+GAKLK+LV
Sbjct: 314 MRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLV 373
Query: 385 PCVLLSFDNEQILMWRGKDWKSDI 404
PC+LLSF+ E ILMWRG DWKS +
Sbjct: 374 PCILLSFEFEHILMWRGSDWKSSL 394
BLAST of Cp4.1LG01g15440 vs. TrEMBL
Match:
E5GBI3_CUCME (RNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1)
HSP 1 Score: 986.1 bits (2548), Expect = 1.7e-284
Identity = 493/557 (88.51%), Postives = 521/557 (93.54%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRT-NPPKPPNPA 60
MA +PSLPGL LFSSLPSAPPPH+PS S+PSTPIPIPKYP PKSR LRT NPPK PNPA
Sbjct: 48 MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 107
Query: 61 LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 108 LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 167
Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
REPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 168 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 227
Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK
Sbjct: 228 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 287
Query: 241 VRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
VRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP
Sbjct: 288 VRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 347
Query: 301 VYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVD 360
VYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK+D
Sbjct: 348 VYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVKID 407
Query: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTND 420
CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D SA LPS+A +ND
Sbjct: 408 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASSND 467
Query: 421 -----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
GES+EN DLL+GNH TIKTSPKMKLLWE+AIDSNKAL+L+EIGLAPD+LLE+VEE
Sbjct: 468 SLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERVEE 527
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFDNVNPTV 540
FERISQATEHSYPA I SSE + SSP D+ ESQDH E+NY+SDDD RE DLFDNV+P V
Sbjct: 528 FERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGREEDLFDNVDPLV 587
Query: 541 PMGSLPVDIIAKKLRPE 552
P+GSLPVDIIAKKL E
Sbjct: 588 PLGSLPVDIIAKKLSSE 603
BLAST of Cp4.1LG01g15440 vs. TrEMBL
Match:
A0A0A0KQ61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G600920 PE=4 SV=1)
HSP 1 Score: 983.8 bits (2542), Expect = 8.6e-284
Identity = 493/557 (88.51%), Postives = 518/557 (93.00%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRT-NPPKPPNPA 60
MA +PSLPGL LFSSLPSAPPPH+P+ S+PSTPIPIPKYP PKSR LRT NPPKPPNPA
Sbjct: 1 MAGIPSLPGLTLFSSLPSAPPPHEPTPTSSPSTPIPIPKYPPPKSRTLRTNNPPKPPNPA 60
Query: 61 LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
LKTFH RSKYYKPVKDGVISS+G+RAVVIGDSGVSY LP APFEFQYSYSE PKVKPIAI
Sbjct: 61 LKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKVKPIAI 120
Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
REPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVK V++PGPFPLG++
Sbjct: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKLVQLPGPFPLGQH 180
Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK
Sbjct: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
Query: 241 VRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
VRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP
Sbjct: 241 VRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
Query: 301 VYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVD 360
VYPKLIQEAPEGLT +EAN LRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK+D
Sbjct: 301 VYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKID 360
Query: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTND 420
CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D SA LPS+A +ND
Sbjct: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDRSAPLPSRASSND 420
Query: 421 -----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
GES+EN DLLHGNH TIKTSPKMKLLWE AIDSNKALLL+EIGLAPDDLLEKVEE
Sbjct: 421 SLGSPGESLENSDLLHGNHHTIKTSPKMKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEE 480
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFDNVNPTV 540
FERISQATEHSYPA I SSE D SSPDD+ +SQDH E+NY+SDDD RE DLFDN +P V
Sbjct: 481 FERISQATEHSYPAFITSSE-DVSSPDDSPKSQDHTEANYNSDDDVGREEDLFDNADPLV 540
Query: 541 PMGSLPVDIIAKKLRPE 552
P+GSLPVDIIAKKL E
Sbjct: 541 PLGSLPVDIIAKKLSSE 556
BLAST of Cp4.1LG01g15440 vs. TrEMBL
Match:
D7TDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0127g00410 PE=4 SV=1)
HSP 1 Score: 782.3 bits (2019), Expect = 3.8e-223
Identity = 402/563 (71.40%), Postives = 452/563 (80.28%), Query Frame = 1
Query: 1 MARMPSLPGLH-LFSSLPSAPPPHDPSSASTPSTPIPIPKYPQP-KSRILRTNPPKPPNP 60
M + +LPG LFSSLP PPP+D ++++ P PIPIPKYP P KS+ P KPP P
Sbjct: 1 MVILATLPGSSSLFSSLPQGPPPNDSTTSTPPQPPIPIPKYPPPLKSQKSSRPPTKPPTP 60
Query: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIA 120
A KT H RSKYYKPV DGVI+S GDR+VVIG+SGVSYLLP APFEFQ+SYSE PK KP+A
Sbjct: 61 AFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLA 120
Query: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGK 180
IREPAFLPFAPPTMPRPWTGKAPLK SKKKIP+FDSFNPPPPGTKGVK+VEMPGPFPLGK
Sbjct: 121 IREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGK 180
Query: 181 YPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
+P EG++REEILGEPL EIRMLVKP+LSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC
Sbjct: 181 FPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
Query: 241 KVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
KVRCKGVPT+DMDN+CHHLEEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQYPVMLWKPAA
Sbjct: 241 KVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAA 300
Query: 301 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
PVYPKLIQEAPEGLT EA+ELRMKGKNL+PIC+L KNGVYISLV DVR AFEGS LVK+
Sbjct: 301 PVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSPLVKI 360
Query: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTN 420
DC GMH SDYKK+GAKLKELVPCVLLSFD+EQIL WRG WKS PS +P A
Sbjct: 361 DCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVADVA 420
Query: 421 DGESIENGDLLHGNHQTIKT-----SPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVE 480
G +E + NH + T SPKM LW+ AI+S+KALLL+E GL PD LL+ VE
Sbjct: 421 SG--LEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDETGLGPDALLKVVE 480
Query: 481 EFERISQATEHSYPALIMSSEDDSSSPDDNLE---SQDHDESNYSSDDDEDR--EGDLFD 540
EFE ISQATEHSYPAL+MSSED + E S+D+ E +DDD+D + +
Sbjct: 481 EFEGISQATEHSYPALVMSSEDGTGGTKAEYEGYNSEDYSEDEMYNDDDDDEYLVNESLE 540
Query: 541 NVNPTVPMGSLPVDIIAKKLRPE 552
+ VP+GSLPVD++AK+L E
Sbjct: 541 EMESPVPLGSLPVDLLAKQLGEE 561
BLAST of Cp4.1LG01g15440 vs. TrEMBL
Match:
W9S1N4_9ROSA (CRS2-associated factor 2 OS=Morus notabilis GN=L484_027746 PE=4 SV=1)
HSP 1 Score: 769.2 bits (1985), Expect = 3.3e-219
Identity = 401/570 (70.35%), Postives = 461/570 (80.88%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHD--PSSASTPSTPIPIPKYPQPKSRILRTNPPK---- 60
MA + SL GL+LFSSLPS PPP+D PS++S+PS PIPIPKYP P + R PP+
Sbjct: 1 MAILASLQGLNLFSSLPSTPPPNDQPPSTSSSPSPPIPIPKYP-PSFKSQRRKPPQNVPQ 60
Query: 61 -----PPNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYS 120
PPNPALK+ HRRS YYKPV+DGVI+S R+VVIGDSGVSYLLP APFEFQYSYS
Sbjct: 61 NSSKPPPNPALKSVHRRSNYYKPVRDGVIASDDGRSVVIGDSGVSYLLPGAPFEFQYSYS 120
Query: 121 EIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSK-----KKIPVFDSFNPPPPGTKG 180
E PKVKP+AIREPAFLPFAPPTMPRPWTGKAPLKS+K +KIP+ DSFNPPP GT+G
Sbjct: 121 ETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSAKEKKRNRKIPLLDSFNPPPRGTEG 180
Query: 181 VKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNM 240
VKQ+EMPGPFP GKYPK K++EEILGEPLK WEI+ML+KPHLS NRQVNLGRDGLTHNM
Sbjct: 181 VKQMEMPGPFPFGKYPKVRKTKEEILGEPLKKWEIKMLIKPHLSSNRQVNLGRDGLTHNM 240
Query: 241 LELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYR 300
LELIHSHWKR VCK+RCKGVPTVDMDN+C H+E KTGGKII+R GG +YLFRGRNYNY
Sbjct: 241 LELIHSHWKRTPVCKIRCKGVPTVDMDNVCQHIENKTGGKIINRAGGAVYLFRGRNYNYA 300
Query: 301 TRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVN 360
RPQYPVMLWKPAAPVYPKLIQEAP GLT +EANELRMKGK LLPICKLAKNGVYISLV
Sbjct: 301 NRPQYPVMLWKPAAPVYPKLIQEAPGGLTKDEANELRMKGKKLLPICKLAKNGVYISLVK 360
Query: 361 DVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS--- 420
DVRHAFEGS LVK+DC GMH SDYKKLGAKLKELVPCVLLSFD+EQILMWRG DWKS
Sbjct: 361 DVRHAFEGSPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGSDWKSMYR 420
Query: 421 DISEDPSATLPSQARTND--GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLN 480
D+S + L + T+D +N D + QT++TSPKM LW++A++SNKA+LL+
Sbjct: 421 DVS--IPSILGNDVVTSDLHRSGKDNDDSGDPDTQTVRTSPKMLSLWKRALESNKAILLD 480
Query: 481 EIGLAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLE--SQDHDESNYSSD 540
EI L PD LL KVEEFE ISQATEHSYPALI+S ED +SS + E SQ D+++ D
Sbjct: 481 EINLGPDALLMKVEEFEGISQATEHSYPALIVSGEDGTSSSMEESEYLSQSDDDNDDFID 540
Query: 541 DDEDREGDLFDNVNPTVPMGSLPVDIIAKK 548
D ++ D++ + + ++P+GSLPVD+IAKK
Sbjct: 541 DYDEENDDVYYDSDSSLPLGSLPVDVIAKK 567
BLAST of Cp4.1LG01g15440 vs. TrEMBL
Match:
B9HTW6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s05230g PE=4 SV=2)
HSP 1 Score: 756.9 bits (1953), Expect = 1.7e-215
Identity = 391/558 (70.07%), Postives = 447/558 (80.11%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRTNPPKPPNPAL 60
+A +P+ PGL+LFSSLP P SS S P PIPIPKYP P + + NPA
Sbjct: 4 VASLPT-PGLNLFSSLPLGKDPTASSSPSPPPPPIPIPKYPPPLKKSKNS-----ANPAF 63
Query: 61 KTFHRRSKYYKPVKDG--VISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIA 120
K H R+KYYKPVKDG VI+S GDR+V++GDSGVSYLLP APFEFQ+SYSE PKVKP+A
Sbjct: 64 KIPHLRTKYYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPGAPFEFQFSYSETPKVKPLA 123
Query: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGK 180
IREPAFLPFAPPTMPRPWTGK PLK+SKKKIPVFDSFNPPP G KGVK VEMPGP+P GK
Sbjct: 124 IREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPPAGKKGVKYVEMPGPYPFGK 183
Query: 181 YPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
+P+EGKSREEILGEPLK WEI++L+KPHLS NRQVNLG DGLTHNMLEL+HSHWKR+RVC
Sbjct: 184 FPEEGKSREEILGEPLKTWEIKLLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVC 243
Query: 241 KVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
KVRCKGVPTVDMDN+C HLEEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 244 KVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAT 303
Query: 301 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
PVYPKLIQEAPEGLT +A+E R KGKNLLPICKLAKNGVYI+LV DVR AFEGS LVKV
Sbjct: 304 PVYPKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRAAFEGSPLVKV 363
Query: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISE-DPSATLPSQ--- 420
DC GM SDYKKLGAKLK+LVPCVLLSFD+EQILMWRG+DWKS E PS + P++
Sbjct: 364 DCKGMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSISFPAELDI 423
Query: 421 ARTNDGESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
A +D + D + + + + +SPKM LLW+ A++SNKA+LL+EI L PD LL KVEE
Sbjct: 424 ASGSDDSGKSDDDCDNSDAKILSSSPKMMLLWKHALESNKAILLDEIDLGPDALLTKVEE 483
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSD----DDEDREGDLFDNV 540
FE ISQATEHSYPAL+MSSED SS+ E H E N+S D DDE + + F+ +
Sbjct: 484 FEGISQATEHSYPALVMSSEDGSSNSISTFEDDSHSE-NFSEDDMYSDDEYYDSESFEEL 543
Query: 541 NPTVPMGSLPVDIIAKKL 549
+ P GSL +D+IA+KL
Sbjct: 544 ETSAPPGSLSIDLIAEKL 554
BLAST of Cp4.1LG01g15440 vs. TAIR10
Match:
AT1G23400.1 (AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)
HSP 1 Score: 716.5 bits (1848), Expect = 1.3e-206
Identity = 371/564 (65.78%), Postives = 442/564 (78.37%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSAS-TPSTPIPIPKY-PQPKSRILRTN------P 60
MA + SL ++LFSSLPS PP D SS + P+ PIPIPKY P ++R +TN P
Sbjct: 1 MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP 60
Query: 61 PKPP-NPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEI 120
KP NPALK H R++YYKPVK+GVISS GDR ++IGDSGVSY LP APFEFQ+SYSE
Sbjct: 61 KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET 120
Query: 121 PKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMP 180
PKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SKKKIP+FDSFNPPP G GVK VEMP
Sbjct: 121 PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP 180
Query: 181 GPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSH 240
GP P G+YPKEG +REE+LGEPLK WE ML+KPH+ NRQVNLGRDG THNMLELIHSH
Sbjct: 181 GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSH 240
Query: 241 WKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPV 300
WKR+RVCKVRCKGVPTVDM+N+C LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRPQYP+
Sbjct: 241 WKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPL 300
Query: 301 MLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFE 360
MLWKPAAPVYPKLIQE PEGLT EEA+E R+KGK+L PICKL+KNGVY+SLV DVR AFE
Sbjct: 301 MLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFE 360
Query: 361 GSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATL 420
S LVKVDC G+ SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++WKS ++P +
Sbjct: 361 LSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNP--LI 420
Query: 421 PSQARTNDGESIENGD-----LLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPD 480
PS + TN ++ D N T +SPKM LW++A++S+KA++L E+ L PD
Sbjct: 421 PSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPD 480
Query: 481 DLLEKVEEFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSS-DDDEDREGD 540
DLL+KVEE E S A EH+Y A+++S+ D ++ +D ++ +D E YS DDD D E
Sbjct: 481 DLLKKVEELEGTSLAAEHTYTAMVLSNTDGAA--EDYVDEKDRSEEYYSDIDDDFDDECS 540
Query: 541 LFDNVNPTVPMGSLPVDIIAKKLR 550
++++P P+GSLPVD I +KLR
Sbjct: 541 DDESLDPVGPVGSLPVDKIVRKLR 560
BLAST of Cp4.1LG01g15440 vs. TAIR10
Match:
AT2G20020.1 (AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)
HSP 1 Score: 435.6 bits (1119), Expect = 4.4e-122
Identity = 208/352 (59.09%), Postives = 260/352 (73.86%), Query Frame = 1
Query: 65 RRSKYYKP------------VKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIP 124
RRSKY KP V D V + + G++Y++ APFEF+YSY+E P
Sbjct: 102 RRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETP 161
Query: 125 KVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPG 184
KVKP+ +REPA+ PF P TM RPWTG+APL S+K FDSF PP G KG+K V+ PG
Sbjct: 162 KVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPG 221
Query: 185 PFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHW 244
PF G P+ S+EEILGEPL E+R LV L RQ+N+GRDGLTHNML IH W
Sbjct: 222 PFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLW 281
Query: 245 KRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVM 304
KR+RVCK++CKGV TVDMDN+C LEEK GGK+I+R GGVL+LFRGRNYN+RTRP++P+M
Sbjct: 282 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 341
Query: 305 LWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEG 364
LWKP APVYP+LIQ+ PEGLT +EA +R KG+ L+PICKL KNGVY LV +V+ AFE
Sbjct: 342 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 401
Query: 365 SILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDIS 405
LV++DC GM SD++K+GAKLK+LVPCVL+SF+NEQIL+WRG++WKS ++
Sbjct: 402 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLT 453
BLAST of Cp4.1LG01g15440 vs. TAIR10
Match:
AT4G31010.1 (AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)
HSP 1 Score: 275.0 bits (702), Expect = 1.0e-73
Identity = 142/318 (44.65%), Postives = 197/318 (61.95%), Query Frame = 1
Query: 92 GVSYLLPDAPFEFQYSYSE-IPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIP 151
GV + D PF+F++SY+E V+PI +REP + PF P + R WTG
Sbjct: 75 GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCA--------- 134
Query: 152 VFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVK--PHLS 211
+ NP GV+ ++ K K RE+I G L E + LV+
Sbjct: 135 --PAVNPKVESVDGVEDPKLE--------EKRRKVREKIQGASLTEAERKFLVELCQRNK 194
Query: 212 HNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHR 271
RQVNLGRDGLTHNML +++HWK +V+C GVPT+DM N+ HLE+KT G+++ +
Sbjct: 195 TKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSK 254
Query: 272 VGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLL 331
G L L+RGRNY+ + RP+ P+MLWKP PVYP+LI+ +GL+I+E +R KG +
Sbjct: 255 HSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVP 314
Query: 332 PICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDN 391
+ KLAKNG Y SLV VR AF S LV++DC G+ DYKK+GAKL++LVPC+L++FD
Sbjct: 315 ALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDK 373
Query: 392 EQILMWRGKDWKSDISED 407
EQ+++WRGKD+K +D
Sbjct: 375 EQVVIWRGKDYKPPKEDD 373
BLAST of Cp4.1LG01g15440 vs. TAIR10
Match:
AT5G54890.1 (AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)
HSP 1 Score: 263.5 bits (672), Expect = 3.0e-70
Identity = 142/358 (39.66%), Postives = 212/358 (59.22%), Query Frame = 1
Query: 44 KSRILRTNPPKPPNPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFE 103
++R + T+ PP L + +K K K + ++ D + ++ D PF+
Sbjct: 25 RARCVSTDDYDPPFSPLS---KPTKPPKEKKKQKTKKQDQSSELVNDLKIP-VISDLPFD 84
Query: 104 FQYSYSEI-PKVKPIAIREPA-FLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPG 163
F+YSYSE P+++PI REP F PF P + R WTG L S P D
Sbjct: 85 FRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALAS-----PEIDQ------- 144
Query: 164 TKGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKP--HLSHNRQVNLGRDG 223
++ V++ R +LGE L E+ L++ H RQ+NLG+ G
Sbjct: 145 SQWVEE------------------RARVLGETLTEDEVTELIERYRHSDCTRQINLGKGG 204
Query: 224 LTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGR 283
+THNM++ IH+HWK+ +++C GVPT+DMDNIC HLEEK+GGKI++R +L L+RGR
Sbjct: 205 VTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGR 264
Query: 284 NYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVY 343
NY+ ++RP P+MLWKP P+YP+L++ +GL EE E+R +G + + KL +NGVY
Sbjct: 265 NYDPKSRPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVY 324
Query: 344 ISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGK 398
+++V VR FE +V++DCT + SD K++G KLKE+VPCV + F +EQI++WRGK
Sbjct: 325 VNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348
BLAST of Cp4.1LG01g15440 vs. TAIR10
Match:
AT3G01370.1 (AT3G01370.1 CRM family member 2)
HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 198 EIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHL 257
E+R L + +++ +G+ G+T ++ IH W+ V K+ C+ + ++M L
Sbjct: 170 ELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVL 229
Query: 258 EEKTGGKIIHRVGGVLYLFRGRNYNY 284
E KTGG +I R G + L+RG NY Y
Sbjct: 230 ETKTGGLVIWRSGSKILLYRGVNYQY 255
BLAST of Cp4.1LG01g15440 vs. NCBI nr
Match:
gi|659090767|ref|XP_008446191.1| (PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis melo])
HSP 1 Score: 986.1 bits (2548), Expect = 2.5e-284
Identity = 493/557 (88.51%), Postives = 521/557 (93.54%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRT-NPPKPPNPA 60
MA +PSLPGL LFSSLPSAPPPH+PS S+PSTPIPIPKYP PKSR LRT NPPK PNPA
Sbjct: 56 MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 115
Query: 61 LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 116 LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 175
Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
REPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 176 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 235
Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK
Sbjct: 236 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 295
Query: 241 VRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
VRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP
Sbjct: 296 VRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 355
Query: 301 VYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVD 360
VYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK+D
Sbjct: 356 VYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVKID 415
Query: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTND 420
CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D SA LPS+A +ND
Sbjct: 416 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASSND 475
Query: 421 -----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
GES+EN DLL+GNH TIKTSPKMKLLWE+AIDSNKAL+L+EIGLAPD+LLE+VEE
Sbjct: 476 SLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERVEE 535
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFDNVNPTV 540
FERISQATEHSYPA I SSE + SSP D+ ESQDH E+NY+SDDD RE DLFDNV+P V
Sbjct: 536 FERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGREEDLFDNVDPLV 595
Query: 541 PMGSLPVDIIAKKLRPE 552
P+GSLPVDIIAKKL E
Sbjct: 596 PLGSLPVDIIAKKLSSE 611
BLAST of Cp4.1LG01g15440 vs. NCBI nr
Match:
gi|307135966|gb|ADN33825.1| (RNA splicing factor [Cucumis melo subsp. melo])
HSP 1 Score: 986.1 bits (2548), Expect = 2.5e-284
Identity = 493/557 (88.51%), Postives = 521/557 (93.54%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRT-NPPKPPNPA 60
MA +PSLPGL LFSSLPSAPPPH+PS S+PSTPIPIPKYP PKSR LRT NPPK PNPA
Sbjct: 48 MATIPSLPGLTLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPNPA 107
Query: 61 LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
LKTFHRRSKYYKPVKDGVISS+G+RAVVIGDSGVSYLLP APFEFQYSYSE P VKPIAI
Sbjct: 108 LKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAI 167
Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
REPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVKQV++PGPFPLG+Y
Sbjct: 168 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQY 227
Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK
Sbjct: 228 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 287
Query: 241 VRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
VRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP
Sbjct: 288 VRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 347
Query: 301 VYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVD 360
VYPKLIQEAPEGLT EEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK+D
Sbjct: 348 VYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVKID 407
Query: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTND 420
CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D SA LPS+A +ND
Sbjct: 408 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASSND 467
Query: 421 -----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
GES+EN DLL+GNH TIKTSPKMKLLWE+AIDSNKAL+L+EIGLAPD+LLE+VEE
Sbjct: 468 SLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERVEE 527
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFDNVNPTV 540
FERISQATEHSYPA I SSE + SSP D+ ESQDH E+NY+SDDD RE DLFDNV+P V
Sbjct: 528 FERISQATEHSYPAFITSSE-EVSSPADSPESQDHSEANYNSDDDVGREEDLFDNVDPLV 587
Query: 541 PMGSLPVDIIAKKLRPE 552
P+GSLPVDIIAKKL E
Sbjct: 588 PLGSLPVDIIAKKLSSE 603
BLAST of Cp4.1LG01g15440 vs. NCBI nr
Match:
gi|778705000|ref|XP_004135256.2| (PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis sativus])
HSP 1 Score: 983.8 bits (2542), Expect = 1.2e-283
Identity = 493/557 (88.51%), Postives = 518/557 (93.00%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDPSSASTPSTPIPIPKYPQPKSRILRT-NPPKPPNPA 60
MA +PSLPGL LFSSLPSAPPPH+P+ S+PSTPIPIPKYP PKSR LRT NPPKPPNPA
Sbjct: 1 MAGIPSLPGLTLFSSLPSAPPPHEPTPTSSPSTPIPIPKYPPPKSRTLRTNNPPKPPNPA 60
Query: 61 LKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIAI 120
LKTFH RSKYYKPVKDGVISS+G+RAVVIGDSGVSY LP APFEFQYSYSE PKVKPIAI
Sbjct: 61 LKTFHHRSKYYKPVKDGVISSNGERAVVIGDSGVSYHLPGAPFEFQYSYSETPKVKPIAI 120
Query: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGKY 180
REPAFLPFAPPTMPRPWTGKAPLKSSKKKIP+FDSFNPPPPGTKGVK V++PGPFPLG++
Sbjct: 121 REPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKLVQLPGPFPLGQH 180
Query: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK
Sbjct: 181 PKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCK 240
Query: 241 VRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
VRCKGVPTVDMDNICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP
Sbjct: 241 VRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAP 300
Query: 301 VYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVD 360
VYPKLIQEAPEGLT +EAN LRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK+D
Sbjct: 301 VYPKLIQEAPEGLTKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKID 360
Query: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTND 420
CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS IS+D SA LPS+A +ND
Sbjct: 361 CTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDRSAPLPSRASSND 420
Query: 421 -----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVEE 480
GES+EN DLLHGNH TIKTSPKMKLLWE AIDSNKALLL+EIGLAPDDLLEKVEE
Sbjct: 421 SLGSPGESLENSDLLHGNHHTIKTSPKMKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEE 480
Query: 481 FERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSSDDDEDREGDLFDNVNPTV 540
FERISQATEHSYPA I SSE D SSPDD+ +SQDH E+NY+SDDD RE DLFDN +P V
Sbjct: 481 FERISQATEHSYPAFITSSE-DVSSPDDSPKSQDHTEANYNSDDDVGREEDLFDNADPLV 540
Query: 541 PMGSLPVDIIAKKLRPE 552
P+GSLPVDIIAKKL E
Sbjct: 541 PLGSLPVDIIAKKLSSE 556
BLAST of Cp4.1LG01g15440 vs. NCBI nr
Match:
gi|225425575|ref|XP_002267079.1| (PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera])
HSP 1 Score: 782.3 bits (2019), Expect = 5.4e-223
Identity = 402/563 (71.40%), Postives = 452/563 (80.28%), Query Frame = 1
Query: 1 MARMPSLPGLH-LFSSLPSAPPPHDPSSASTPSTPIPIPKYPQP-KSRILRTNPPKPPNP 60
M + +LPG LFSSLP PPP+D ++++ P PIPIPKYP P KS+ P KPP P
Sbjct: 1 MVILATLPGSSSLFSSLPQGPPPNDSTTSTPPQPPIPIPKYPPPLKSQKSSRPPTKPPTP 60
Query: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIA 120
A KT H RSKYYKPV DGVI+S GDR+VVIG+SGVSYLLP APFEFQ+SYSE PK KP+A
Sbjct: 61 AFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLA 120
Query: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGK 180
IREPAFLPFAPPTMPRPWTGKAPLK SKKKIP+FDSFNPPPPGTKGVK+VEMPGPFPLGK
Sbjct: 121 IREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGK 180
Query: 181 YPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
+P EG++REEILGEPL EIRMLVKP+LSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC
Sbjct: 181 FPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
Query: 241 KVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
KVRCKGVPT+DMDN+CHHLEEKTGGKIIHRVGGV+YLFRGRNYNYRTRPQYPVMLWKPAA
Sbjct: 241 KVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAA 300
Query: 301 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
PVYPKLIQEAPEGLT EA+ELRMKGKNL+PIC+L KNGVYISLV DVR AFEGS LVK+
Sbjct: 301 PVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSPLVKI 360
Query: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTN 420
DC GMH SDYKK+GAKLKELVPCVLLSFD+EQIL WRG WKS PS +P A
Sbjct: 361 DCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVADVA 420
Query: 421 DGESIENGDLLHGNHQTIKT-----SPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVE 480
G +E + NH + T SPKM LW+ AI+S+KALLL+E GL PD LL+ VE
Sbjct: 421 SG--LEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDETGLGPDALLKVVE 480
Query: 481 EFERISQATEHSYPALIMSSEDDSSSPDDNLE---SQDHDESNYSSDDDEDR--EGDLFD 540
EFE ISQATEHSYPAL+MSSED + E S+D+ E +DDD+D + +
Sbjct: 481 EFEGISQATEHSYPALVMSSEDGTGGTKAEYEGYNSEDYSEDEMYNDDDDDEYLVNESLE 540
Query: 541 NVNPTVPMGSLPVDIIAKKLRPE 552
+ VP+GSLPVD++AK+L E
Sbjct: 541 EMESPVPLGSLPVDLLAKQLGEE 561
BLAST of Cp4.1LG01g15440 vs. NCBI nr
Match:
gi|1009153608|ref|XP_015894725.1| (PREDICTED: CRS2-associated factor 2, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 778.9 bits (2010), Expect = 6.0e-222
Identity = 401/572 (70.10%), Postives = 461/572 (80.59%), Query Frame = 1
Query: 1 MARMPSLPGLHLFSSLPSAPPPHDP------SSASTPSTPIPIPKYPQP-----KSRILR 60
MA + SLPGL+LFSSLPS+PPP DP SS+S+PS PIPIPKYP P K++ +
Sbjct: 1 MAIVASLPGLNLFSSLPSSPPPKDPQSTSSSSSSSSPSPPIPIPKYPPPLKTQRKTQNIP 60
Query: 61 TNPPKPP--NPALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYS 120
+PPK P NPALK HRRS YYKPVK+GV+SS GDR+V+IG+SGVSYLLP APFEFQ+S
Sbjct: 61 LHPPKSPPSNPALKAVHRRSNYYKPVKEGVVSSDGDRSVIIGESGVSYLLPGAPFEFQFS 120
Query: 121 YSEIPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSK-----KKIPVFDSFNPPPPGT 180
YSE PKVKP+AIREPAFLPFAPPTMPRPWTGKAPLKS+K +KIP+FDSFNPPP GT
Sbjct: 121 YSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSAKEKKRNRKIPLFDSFNPPPEGT 180
Query: 181 KGVKQVEMPGPFPLGKYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTH 240
+GVK V+MPGPFP G+YPKEGK+REEILGEPLK WEIRM+VKP S NRQVNLGRDGLTH
Sbjct: 181 EGVKHVQMPGPFPYGQYPKEGKTREEILGEPLKKWEIRMMVKPLFSDNRQVNLGRDGLTH 240
Query: 241 NMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYN 300
NMLELIHSHWKRQ+VCK+RCKGVPTVDMDN+C+H+EEKTGGKIIHRVGGV+YLFRGRNYN
Sbjct: 241 NMLELIHSHWKRQQVCKIRCKGVPTVDMDNVCYHIEEKTGGKIIHRVGGVVYLFRGRNYN 300
Query: 301 YRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISL 360
YRTRPQYPVMLWKPAAPVYPKLIQEAPEGLT EA+E RMKGK LLPICKLAKNGVY++L
Sbjct: 301 YRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKAEADEFRMKGKKLLPICKLAKNGVYVNL 360
Query: 361 VNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSD 420
V DVRHAFEGS LVK+DC GMH SDYKKLGAKLKELVPCVLLSFD+EQILMWRG +WKS
Sbjct: 361 VRDVRHAFEGSPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGSNWKSR 420
Query: 421 ISEDPSATLPSQARTNDGESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIG 480
P A D + D + + TSPKM LW++AI+S+KALLL+EIG
Sbjct: 421 CQVAPPPNPDETATNLDASGKADDDCRKHDIKMASTSPKMMALWKRAIESSKALLLDEIG 480
Query: 481 LAPDDLLEKVEEFERISQATEHSYPALIMSSEDDSS---SPDDNLESQDHDESNYSSDDD 540
L PD LL+KVEEFE +SQATEHS PALI+S E S S DD +D SN+ D++
Sbjct: 481 LGPDALLQKVEEFEGVSQATEHSLPALILSGEYGKSMEESEDDEGYDEDEMYSNHDYDEN 540
Query: 541 E---DREGDLFDNVNPTVPMGSLPVDIIAKKL 549
D + D++ + + ++P+GSLP+D IAKKL
Sbjct: 541 ANQFDEDDDVYYDSDSSIPLGSLPIDRIAKKL 572
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| CAF2P_ARATH | 2.3e-205 | 65.78 | CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=... | [more] |
| CAF2P_ORYSJ | 1.0e-149 | 50.33 | CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g... | [more] |
| CAF2P_MAIZE | 7.5e-148 | 48.67 | CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1 | [more] |
| CAF1P_ORYSJ | 6.4e-123 | 56.32 | CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g... | [more] |
| CAF1P_MAIZE | 2.1e-121 | 56.51 | CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| E5GBI3_CUCME | 1.7e-284 | 88.51 | RNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1 | [more] |
| A0A0A0KQ61_CUCSA | 8.6e-284 | 88.51 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G600920 PE=4 SV=1 | [more] |
| D7TDH9_VITVI | 3.8e-223 | 71.40 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0127g00410 PE=4 SV=... | [more] |
| W9S1N4_9ROSA | 3.3e-219 | 70.35 | CRS2-associated factor 2 OS=Morus notabilis GN=L484_027746 PE=4 SV=1 | [more] |
| B9HTW6_POPTR | 1.7e-215 | 70.07 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s05230g PE=4 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G23400.1 | 1.3e-206 | 65.78 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
| AT2G20020.1 | 4.4e-122 | 59.09 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
| AT4G31010.1 | 1.0e-73 | 44.65 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
| AT5G54890.1 | 3.0e-70 | 39.66 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
| AT3G01370.1 | 1.0e-09 | 32.56 | CRM family member 2 | [more] |
