Cp4.1LG01g15120 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g15120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Adenine nucleotide alpha hydrolases-like superfamily protein
Location	Cp4.1LG01 : 9064766 .. 9065128 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAAACTGGAACCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAATTGGACTCTGTTTCTGTGAAAACCGGACCGAAGAAGGCTGATGATTGTGTAGAGGGTGGTGAGGTTGGAGCTAAGCCAGGGCTGGGAAATGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTAGGCGGTGGCGGTGGGGCAGTGGAGTATTGCATACAGAATGCAAGCTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGGTATTTGATCACGACAAAGCGACAAAAGGATTTCTGGCTTTTGGCTTAA

mRNA sequence

ATGGGGAAAACTGGAACCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAATTGGACTCTGTTTCTGTGAAAACCGGACCGAAGAAGGCTGATGATTGTGTAGAGGGTGGTGAGGTTGGAGCTAAGCCAGGGCTGGGAAATGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTAGGCGGTGGCGGTGGGGCAGTGGAGTATTGCATACAGAATGCAAGCTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGGTATTTGATCACGACAAAGCGACAAAAGGATTTCTGGCTTTTGGCTTAA

Coding sequence (CDS)

ATGGGGAAAACTGGAACCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAATTGGACTCTGTTTCTGTGAAAACCGGACCGAAGAAGGCTGATGATTGTGTAGAGGGTGGTGAGGTTGGAGCTAAGCCAGGGCTGGGAAATGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTAGGCGGTGGCGGTGGGGCAGTGGAGTATTGCATACAGAATGCAAGCTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGGTATTTGATCACGACAAAGCGACAAAAGGATTTCTGGCTTTTGGCTTAA

Protein sequence

MGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGPKKADDCVEGGEVGAKPGLGNGRKIMIVVDSTIEAEGALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA

Homology

[Close]

BLAST of Cp4.1LG01g15120 vs. TrEMBL
Match: A0A0A0KQW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606800 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-21
Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 1  MGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGP-KKADDCVE------GGEVGAKP 60
          MGKTG KLPSFCLNRIRPHVRVPIQSK D VSVKTGP KK DDC++      G +   K 
Sbjct: 1  MGKTGAKLPSFCLNRIRPHVRVPIQSKPDFVSVKTGPSKKIDDCLDEKNDHVGVDQSNKA 60

Query: 61 GLGNGRKIMIVVDSTIEAEGAL 76
           +G GRKIMIVVDSTIEAEGAL
Sbjct: 61 VMGIGRKIMIVVDSTIEAEGAL 82

[Close]

BLAST of Cp4.1LG01g15120 vs. TrEMBL
Match: M1CR48_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028357 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18
Identity = 60/113 (53.10%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 17  RPHVRVPIQSKLDSVSVKTGPKKADDCVEGGE--------VGAKPGLGNGRKIMIVVDS- 76
           RP ++V +     +V+V  G +K    VE  +        +G K      R IM+     
Sbjct: 138 RPEIQVEV-----AVAVAQGKEKGPIIVEESKKHDVSLLVLGQKKKSMTWRLIMMWAHGG 197

Query: 77  TIEAEGALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
            + A G  GGGGG VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 198 QVVAGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 245

[Close]

BLAST of Cp4.1LG01g15120 vs. TrEMBL
Match: K4BXS3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-17
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 73  GALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           G  GGGGG VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 154 GGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 201

[Close]

BLAST of Cp4.1LG01g15120 vs. TrEMBL
Match: A0A059BFN2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02426 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-15
Identity = 56/111 (50.45%), Postives = 67/111 (60.36%), Query Frame = 1


Query: 17  RPHVRVP---IQSKLDSVSVKTGPKKADDCVEGGE----VGAKPGLGNGRKIMIVVDSTI 76
           RP V++    +Q K      + GPK  ++  + G     +G K    + R +M+ V    
Sbjct: 137 RPEVQIETVLVQGK------EKGPKILEEARKSGASLLVMGQKKRSISWRLLMMWVGGNR 196

Query: 77  EAEGALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
              G    GGG VEYCIQNA CMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 197 MGGGT--AGGGVVEYCIQNAECMAIAVRRKSKKLGGYLITTKRQKDFWLLA 239

[Close]

BLAST of Cp4.1LG01g15120 vs. TrEMBL
Match: A0A0J8EZN7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g139740 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-15
Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = 1


Query: 25  QSKLDSVSVKT----GPKKADDCVEGGEVGAKPGLGNGRK-------IMIVVDSTIEAEG 84
           QSK+  V V+     G +K    +E         L  G+K       ++++  S   A G
Sbjct: 136 QSKMPEVEVEVKMAEGKEKGPTIIEEARKQEVSLLVLGQKKQSTTWRLLLMWASNKVATG 195

Query: 85  ALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
             GGG G VEYCIQNA+CMA+AVRRKSK++GGYLITTKR KDFWLLA
Sbjct: 196 VGGGGVGVVEYCIQNATCMALAVRRKSKRVGGYLITTKRHKDFWLLA 242

[Close]

BLAST of Cp4.1LG01g15120 vs. TAIR10
Match: AT2G03720.1 (AT2G03720.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 1


Query: 8   LPSFCLNRIRPHVRVPIQSKLDSVSVKTGPKKADDCVEGGEVGAKPGLGNGRKIMIVVDS 67
           L +FC  + +P+V+  I      V V+T  +K    VE  +      L  G++       
Sbjct: 60  LKNFCQLK-KPNVKTEI------VVVETAEEKGKTIVEESKKQGAGVLVLGQRKRTSKWR 119

Query: 68  TIEAEGALGG-GGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
            I      GG GGG VEYCI N+ CMAIAVR+KS   GGYLITTKR KDFWLLA
Sbjct: 120 VIWKWRTKGGMGGGVVEYCIHNSDCMAIAVRKKSNN-GGYLITTKRHKDFWLLA 165

[Close]

BLAST of Cp4.1LG01g15120 vs. TAIR10
Match: AT1G69080.1 (AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 1


Query: 82  VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           VEYCI N+ CMAIAVR++ KKLGGY +TTKR KDFWLLA
Sbjct: 185 VEYCINNSPCMAIAVRKRGKKLGGYTLTTKRHKDFWLLA 223

[Close]

BLAST of Cp4.1LG01g15120 vs. TAIR10
Match: AT5G17390.1 (AT5G17390.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-12
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1


Query: 77  GGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           G  G ++YC++NASCM IAV+ K++KLGGYLITTKR K+FWLLA
Sbjct: 242 GHEGVLKYCLENASCMTIAVKPKNRKLGGYLITTKRHKNFWLLA 285

[Close]

BLAST of Cp4.1LG01g15120 vs. TAIR10
Match: AT3G03290.1 (AT3G03290.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-12
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 1


Query: 77  GGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           G  G ++YC++ ASCM IAV+ K++KLGGYLITTKR K+FWLLA
Sbjct: 231 GRAGTLKYCLEKASCMTIAVKPKNRKLGGYLITTKRHKNFWLLA 274

[Close]

BLAST of Cp4.1LG01g15120 vs. TAIR10
Match: AT1G44760.1 (AT1G44760.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1


Query: 82  VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           V  CI  A C+ I VR++ K +GGYLI T+ QK+FWLLA
Sbjct: 175 VNRCINGADCLTIGVRKQCKGVGGYLINTRWQKNFWLLA 213

[Close]

BLAST of Cp4.1LG01g15120 vs. NCBI nr
Match: gi|778705646|ref|XP_004135143.2| (PREDICTED: uncharacterized protein LOC101211142 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 5.8e-21
Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 1  MGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGP-KKADDCVE------GGEVGAKP 60
          MGKTG KLPSFCLNRIRPHVRVPIQSK D VSVKTGP KK DDC++      G +   K 
Sbjct: 1  MGKTGAKLPSFCLNRIRPHVRVPIQSKPDFVSVKTGPSKKIDDCLDEKNDHVGVDQSNKA 60

Query: 61 GLGNGRKIMIVVDSTIEAEGAL 76
           +G GRKIMIVVDSTIEAEGAL
Sbjct: 61 VMGIGRKIMIVVDSTIEAEGAL 82

[Close]

BLAST of Cp4.1LG01g15120 vs. NCBI nr
Match: gi|659091274|ref|XP_008446464.1| (PREDICTED: uncharacterized protein LOC103489193 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 4.9e-20
Identity = 59/82 (71.95%), Postives = 62/82 (75.61%), Query Frame = 1


Query: 1  MGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGP-KKADDCVE------GGEVGAKP 60
          MGKTG KLPSFCLNRIRPHVRVPIQSK D VS KTGP KK DDC +      G +   K 
Sbjct: 1  MGKTGAKLPSFCLNRIRPHVRVPIQSKPDYVSAKTGPNKKIDDCSDEKNDHIGVDQSNKG 60

Query: 61 GLGNGRKIMIVVDSTIEAEGAL 76
           +G GRKIMIVVDSTIEAEGAL
Sbjct: 61 VMGIGRKIMIVVDSTIEAEGAL 82

[Close]

BLAST of Cp4.1LG01g15120 vs. NCBI nr
Match: gi|565363886|ref|XP_006348660.1| (PREDICTED: uncharacterized protein LOC102586821 [Solanum tuberosum])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 60/113 (53.10%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 17  RPHVRVPIQSKLDSVSVKTGPKKADDCVEGGE--------VGAKPGLGNGRKIMIVVDS- 76
           RP ++V +     +V+V  G +K    VE  +        +G K      R IM+     
Sbjct: 138 RPEIQVEV-----AVAVAQGKEKGPIIVEESKKHDVSLLVLGQKKKSMTWRLIMMWAHGG 197

Query: 77  TIEAEGALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
            + A G  GGGGG VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 198 QVVAGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 245

[Close]

BLAST of Cp4.1LG01g15120 vs. NCBI nr
Match: gi|460386688|ref|XP_004239028.1| (PREDICTED: uncharacterized protein LOC101261709 [Solanum lycopersicum])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 1


Query: 73  GALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
           G  GGGGG VEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 189 GGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 236

[Close]

BLAST of Cp4.1LG01g15120 vs. NCBI nr
Match: gi|970028790|ref|XP_015075718.1| (PREDICTED: uncharacterized protein LOC107019869 [Solanum pennellii])

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16
Identity = 59/113 (52.21%), Postives = 67/113 (59.29%), Query Frame = 1


Query: 17  RPHVRVPIQSKLDSVSVKTGPKKADDCVEGGE--------VGAKPGLGNGRKIMIVVDS- 76
           RP V+V        V+V  G +K    +E  +        +G K      R IM+     
Sbjct: 134 RPEVQV-------EVTVAEGKEKGPIIIEESKKHDVSLLILGQKKRSMTWRLIMMWAHGG 193

Query: 77  TIEAEGALGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 121
            + A G  GGGGG VEYCIQNA CMAIAVRRKSKKLGGYLITTKRQKDFWLLA
Sbjct: 194 RVVAGGGGGGGGGVVEYCIQNAGCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 239

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g15120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g15120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQW0_CUCSA	4.1e-21	73.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606800 PE=4 SV=1	[more]
M1CR48_SOLTU	9.4e-18	53.10	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028357 PE=4 SV=1	[more]
K4BXS3_SOLLC	7.9e-17	93.75	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A059BFN2_EUCGR	2.6e-15	50.45	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02426 PE=4 SV=1	[more]
A0A0J8EZN7_BETVU	9.7e-15	48.60	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g139740 PE=4 S...	[more]

BLAST of Cp4.1LG01g15120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03720.1	1.3e-13	44.74	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G69080.1	1.1e-12	76.92	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT5G17390.1	1.4e-12	68.18	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G03290.1	4.0e-12	65.91	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G44760.1	3.9e-07	56.41	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

BLAST of Cp4.1LG01g15120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778705646\|ref\|XP_004135143.2\|	5.8e-21	73.17	PREDICTED: uncharacterized protein LOC101211142 [Cucumis sativus]	[more]
gi\|659091274\|ref\|XP_008446464.1\|	4.9e-20	71.95	PREDICTED: uncharacterized protein LOC103489193 [Cucumis melo]	[more]
gi\|565363886\|ref\|XP_006348660.1\|	1.3e-17	53.10	PREDICTED: uncharacterized protein LOC102586821 [Solanum tuberosum]	[more]
gi\|460386688\|ref\|XP_004239028.1\|	1.1e-16	93.75	PREDICTED: uncharacterized protein LOC101261709 [Solanum lycopersicum]	[more]
gi\|970028790\|ref\|XP_015075718.1\|	1.5e-16	52.21	PREDICTED: uncharacterized protein LOC107019869 [Solanum pennellii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g15120.1	Cp4.1LG01g15120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31964	FAMILY NOT NAMED	coord: 79..115 score: 1.1
None	No IPR available	PANTHER	PTHR31964:SF5	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE PROTEIN-RELATED	coord: 79..115 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g15120	Cucsa.284410	Cucumber (Gy14) v1	cgycpeB0754
Cp4.1LG01g15120	CmaCh04G017110	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g15120	CmoCh04G017980	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g15120	CmoCh18G011180	Cucurbita moschata (Rifu)	cmocpeB395
Cp4.1LG01g15120	Cla020312	Watermelon (97103) v1	cpewmB432
Cp4.1LG01g15120	Csa5G606800	Cucumber (Chinese Long) v2	cpecuB416
Cp4.1LG01g15120	Csa1G039920	Cucumber (Chinese Long) v2	cpecuB379
Cp4.1LG01g15120	MELO3C012161	Melon (DHL92) v3.5.1	cpemeB377
Cp4.1LG01g15120	ClCG05G023590	Watermelon (Charleston Gray)	cpewcgB393
Cp4.1LG01g15120	CSPI05G24430	Wild cucumber (PI 183967)	cpecpiB415
Cp4.1LG01g15120	CSPI01G06360	Wild cucumber (PI 183967)	cpecpiB379
Cp4.1LG01g15120	Lsi04G003530	Bottle gourd (USVL1VR-Ls)	cpelsiB360
Cp4.1LG01g15120	MELO3C017246.2	Melon (DHL92) v3.6.1	cpemedB459
Cp4.1LG01g15120	MELO3C012161.2	Melon (DHL92) v3.6.1	cpemedB437
Cp4.1LG01g15120	MELO3C002051.2	Melon (DHL92) v3.6.1	cpemedB454
Cp4.1LG01g15120	CsaV3_5G033420	Cucumber (Chinese Long) v3	cpecucB0518
Cp4.1LG01g15120	CsaV3_1G006230	Cucumber (Chinese Long) v3	cpecucB0471
Cp4.1LG01g15120	Bhi07G001212	Wax gourd	cpewgoB0568
Cp4.1LG01g15120	Bhi08G000887	Wax gourd	cpewgoB0550
Cp4.1LG01g15120	CsGy5G023930	Cucumber (Gy14) v2	cgybcpeB626
Cp4.1LG01g15120	CsGy1G006050	Cucumber (Gy14) v2	cgybcpeB060
Cp4.1LG01g15120	Carg17319	Silver-seed gourd	carcpeB0148
Cp4.1LG01g15120	Carg14360	Silver-seed gourd	carcpeB0344

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g15120	Cp4.1LG09g02260	Cucurbita pepo (Zucchini)	cpecpeB034

The following block(s) are covering this gene:

None