Cp4.1LG01g14950 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACCAAACAAATGTAAGAATAAATGGTTCCAAGAGGAGGAGAGTGTGGATGTGATTTCCTTTTTGGAACAATCCCAATTGGAGGTTCTTGCACAGCCTCCTATGATAGAAACAAGCGAGCTTGCGCATTTGGAGGCTGCGGAGCCTTCTCTTGCTGAAGCTCAGCTGGCTGTGGATGTTGAATATCCACCTAGGTTTATCCCTCGTCGGCCAGAGATGTCGGAGGAAACAGCTGCTATTATGATTCAAGCTGCGTTTCGTGGATATACGGTATGCTCCAGTTTACATTGCGGTATTTGTTAGAAATCACGAACCTCTAAAATGGTATGATATTGTCCACTTTGAACATAAGCTCTCATGGCTTTGCTTTTGGTTTTCCTAAAAGACCTCATACCAATGGAGATAGTATTCCTTACTTATAAATCTATGATCTTCCTCTTAATTACCCAACGTGAAACTACTTCTCTCAATAATCCTCAACAATCCTCCCCTTGAACAAAGTACACCGTAGAGCCTCCCCTGAAGTTTCCTTCTCTAGAGCTATTGAACAACCTTTCCTTAATCGGGGCTCGACTCCTTCTCTAGAGCCCTCGAACAAACGAAGTACACCGTTTGTTCGACGTAGTATTAAGATCTTTTAGGGATTAGAAACATCAGTAACTGCTGTCCATGAGTTTAAGATTATTTGTTCTTTTTAAAAACTGTTTCTACCTATTGGTAGTTCAAGAAATTTATAGAATTCACAACCAAGTTTTATTTGGAGTTGTATATCGATTGGTCGTACCTTTATTTTCTGCAGAAGGGGTTCATTGTTTCTTCAAAACAAGTTCTTTTGAACACAATAGCTTTAAACTTTGGTGATATATCGGCTGAAAATCCAATTGTACATCAGCCAAGAGGCTTATTTATAGTCAATGTTGCTCATTATTGAGAAATGAGAACCTTAAATGTTGGAGTTTTAAGCTCATTCTTTTTGCTGTTCCTACTGAAATTTCATGAAAGTATTTCTTGTTATCATTCAACTCTGTCCTGGATTTTGAAGAGTTTTTCTTCTACTGGATACAAACAAACATCGGTAATGATTTGCATCATGATTTTCCCCGAGTGTTTTGCATTTCAGAAATGAAATGTATGAATGATTCTTTTGCATTTCTCAATACAGGCACGGAGAGCATTGAGAGCTCTCAAAGCGTCGATGAGATTGAAGGCGTTGGCACAAGGGCAATCTGTCAAACGGCAAGTGGCCCATACTTTAAAATACATGCAGACCATTACTCATTTGCAGGCAGAGATTCATAAGAGGAGAATAAGAATGTCGGAAGAAAATCAGTCTCTTCATCGGCAACTTTATAAGAAACGTGAGAAACATGTCGAGAAGTTAAAATCTTCTGTAAGTTCTCCTTTGTTCCAACTGTCTGTAGTGCTTGTATAAACAAGTCTGTCGCTGTGCTGTGCAATTATGAACTTGTGGCCCCTGTATTACAATTACCTTTCTGGTCAGTACTTGAATACGTTGTTTCGGTTGCTACTTGTTCGTGGTCTTTGTATATACATATGCATGCTTGCATCCATACATGTAGTATACAACCCAGATTTGAAGGTTCAAGCCTAAACTAAAGGTCTAATTATCATCATGCTGGTCTTTTTTTCTTTTCTTTCCAGTTTCTTATTTTTGTTTAACAGTAAAGTGTCATTCATCCAAGTGTTGGTCATTGCTGTAACTTCATGTATATATCATTGTAACGATTGCTTTTCCACTACCCTCCTTTCTGCCTCCTGCATTTATCTAAGAATCAAACTTCAAGTAGTGTAAATGTGTATTTGTTGAAAACAATGGCGTCCTCCATGACTTGCATTACAGATGGACAATGACTGGAATCACAGCACCCAATCTAAGGCACAAATTGAAGCTAAATTATTGAACAAGCAAGTAGGTGCACTTAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCTCATCAGGTACCACATGTTTTTCTTTATCCCGTAGTATGTGCTTGCTGAGTTTAATTCATAACTCTGAAACACAATGATTTTATTGGTCCGAACTTAGAGGACACTTTACCTGTTGGGTTAATGTAACAGTCCAAGCCCACCGCTCGCAGATATTGTCTTTTTTGGGCTTTCCTTTCTAGATTTTTCCTCAAGGTTTTAAAATGCGTCTGCTAGAGAAAGGTTTTAAAATGCGTCTGCTAGAGAAAGTTTTTTACACCCTGATGTTTCATTCTCCTCCCCAATTAATATGGGATCTCATAATCCACCCCATTTGGGGTCTAGCATCCTTGCTAACACACAGTCTCGTGTCCACCCTCCTTTGATGCTCAACCTCCTCGTTGACACATTGCTGGTGTCTGGTTTGATACCATTTGTAACAACTGAAGCCCATAGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTCCGAGATTCCGCTCAAGGTTTTAAAATGCGTCTACTAGGGAGAGGTTTCTACACCTTTATAAATAATTCTTCGTTCTCCTCCCCAACCGACGTGGGATCTCACAGTTAAAGGGTACTTCAAAAAGTCCATATAATTTGCAATCCTGATGGTATTCAATCGTTATGTAATCGCCTTAGTTCTATGATTCTGCTGAATGTATTTCTTTTTGATAGAAAGTTGCTAATGTCTATAGGATATCTCACTGCACTAGCTTTCTCTATAAGGTAGCTTTTAGAAAATCTCTTGTAGGTACCATTAGCTACTCCTTGCAGTTTTGTTCTGCTCATAGTAGGATTGTTTGTCAAGTTCTGTAAACAATAATTTCGATTTGGTAGCGTTCCTTTTAGAAAGTCATGTGAAAATAAGTTTTTATCTATCATTAACAGCCAACATGGAAATTTTTTTCAAGAACTGCAACCCCCAGTTTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCATGGGAACTCCGAATCACCGACGAGCAACTGGATCACATTTCTGTCATGAGCATTGCAACCCGTGCTTCTGTGGTTGATATAATCCAAATTTGTGCTCGTCGTGATCAGATCTTTTATACCAAGCCTTCTCTAAGGTCTCCTACAAGCCAACTGCATAGGCATCATTCTTCTTCAACTTCTAAGCCACTATCTCCCTCATCTAGCAGAAACAAAAAGAATGCAGCCAATTCAGGGATAAGCAGCTGGGGCGCGTATGATGTCAATTCAAAGCTCTTCCGGAGGCATACTATTGGAGGGTCATCACTCAAGGATGATACAACCATTGCCAGTTCACCTTCAGTTTCGAGTCACACAACGCCATCAAAGGCTGCCAAGACTCCGTCCCGGTTTGCAAGTTCATCTAGAACAGAGAAGAAAGGAACAATGGAAAAAGGATCTACAAGTACAGGTTCTGCAAGGAAGCAGCTTTCCTTTACATCTCCTCCTGTTAAGCCAAGGAGGCGATCTAGTCCTCCATTGGTGAAATACTAGCCAAGCACATAAAACCATGAGAAAGTTCGATAATTGATTGATTGATCGTCGAGTTCGTCGAGTCGACGAATCCATTCTTTCATCACCTGCATTCTTCAACAGCTTCTATTTGACCATTTGGGTGAGCTAATATATATGTTTCTTTGGTTTTTTTAGTGTCTTTTTTCTCATTTCCCATACCGTTGTTCTTCCTGAAATTCTTGTTTGTTTCTGGGTGGCTTTTATCTATTGAATCCATTTGTATATTTGTTTGTCTATAATATTGTGAGAATCCTTCTAAGTTATAGTATGGATTATGGAGTATGTGCTTTGATTTTAATTTTATTCTT AAACCAAACAAATGTAAGAATAAATGGTTCCAAGAGGAGGAGAGTGTGGATGTGATTTCCTTTTTGGAACAATCCCAATTGGAGGTTCTTGCACAGCCTCCTATGATAGAAACAAGCGAGCTTGCGCATTTGGAGGCTGCGGAGCCTTCTCTTGCTGAAGCTCAGCTGGCTGTGGATGCACGGAGAGCATTGAGAGCTCTCAAAGCGTCGATGAGATTGAAGGCGTTGGCACAAGGGCAATCTGTCAAACGGCAAGTGGCCCATACTTTAAAATACATGCAGACCATTACTCATTTGCAGGCAGAGATTCATAAGAGGAGAATAAGAATGTCGGAAGAAAATCAGTCTCTTCATCGGCAACTTTATAAGAAACGTGAGAAACATGTCGAGAAGTTAAAATCTTCTATGGACAATGACTGGAATCACAGCACCCAATCTAAGGCACAAATTGAAGCTAAATTATTGAACAAGCAAGTAGGTGCACTTAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCTCATCAGCCAACATGGAAATTTTTTTCAAGAACTGCAACCCCCAGTTTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCATGGGAACTCCGAATCACCGACGAGCAACTGGATCACATTTCTGTCATGAGCATTGCAACCCGTGCTTCTGTGGTTGATATAATCCAAATTTGTGCTCGTCGTGATCAGATCTTTTATACCAAGCCTTCTCTAAGGTCTCCTACAAGCCAACTGCATAGGCATCATTCTTCTTCAACTTCTAAGCCACTATCTCCCTCATCTAGCAGAAACAAAAAGAATGCAGCCAATTCAGGGATAAGCAGCTGGGGCGCGTATGATGTCAATTCAAAGCTCTTCCGGAGGCATACTATTGGAGGGTCATCACTCAAGGATGATACAACCATTGCCAGTTCACCTTCAGTTTCGAGTCACACAACGCCATCAAAGGCTGCCAAGACTCCGTCCCGGTTTGCAAGTTCATCTAGAACAGAGAAGAAAGGAACAATGGAAAAAGGATCTACAAGTACAGGTTCTGCAAGGAAGCAGCTTTCCTTTACATCTCCTCCTGTTAAGCCAAGGAGGCGATCTAGTCCTCCATTGGTGAAATACTAGCCAAGCACATAAAACCATGAGAAAGTTCGATAATTGATTGATTGATCGTCGAGTTCGTCGAGTCGACGAATCCATTCTTTCATCACCTGCATTCTTCAACAGCTTCTATTTGACCATTTGGGTGAGCTAATATATATGTTTCTTTGGTTTTTTTAGTGTCTTTTTTCTCATTTCCCATACCGTTGTTCTTCCTGAAATTCTTGTTTGTTTCTGGGTGGCTTTTATCTATTGAATCCATTTGTATATTTGTTTGTCTATAATATTGTGAGAATCCTTCTAAGTTATAGTATGGATTATGGAGTATGTGCTTTGATTTTAATTTTATTCTT AAACCAAACAAATGTAAGAATAAATGGTTCCAAGAGGAGGAGAGTGTGGATGTGATTTCCTTTTTGGAACAATCCCAATTGGAGGTTCTTGCACAGCCTCCTATGATAGAAACAAGCGAGCTTGCGCATTTGGAGGCTGCGGAGCCTTCTCTTGCTGAAGCTCAGCTGGCTGTGGATGCACGGAGAGCATTGAGAGCTCTCAAAGCGTCGATGAGATTGAAGGCGTTGGCACAAGGGCAATCTGTCAAACGGCAAGTGGCCCATACTTTAAAATACATGCAGACCATTACTCATTTGCAGGCAGAGATTCATAAGAGGAGAATAAGAATGTCGGAAGAAAATCAGTCTCTTCATCGGCAACTTTATAAGAAACGTGAGAAACATGTCGAGAAGTTAAAATCTTCTATGGACAATGACTGGAATCACAGCACCCAATCTAAGGCACAAATTGAAGCTAAATTATTGAACAAGCAAGTAGGTGCACTTAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCTCATCAGCCAACATGGAAATTTTTTTCAAGAACTGCAACCCCCAGTTTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCATGGGAACTCCGAATCACCGACGAGCAACTGGATCACATTTCTGTCATGAGCATTGCAACCCGTGCTTCTGTGGTTGATATAATCCAAATTTGTGCTCGTCGTGATCAGATCTTTTATACCAAGCCTTCTCTAAGGTCTCCTACAAGCCAACTGCATAGGCATCATTCTTCTTCAACTTCTAAGCCACTATCTCCCTCATCTAGCAGAAACAAAAAGAATGCAGCCAATTCAGGGATAAGCAGCTGGGGCGCGTATGATGTCAATTCAAAGCTCTTCCGGAGGCATACTATTGGAGGGTCATCACTCAAGGATGATACAACCATTGCCAGTTCACCTTCAGTTTCGAGTCACACAACGCCATCAAAGGCTGCCAAGACTCCGTCCCGGTTTGCAAGTTCATCTAGAACAGAGAAGAAAGGAACAATGGAAAAAGGATCTACAAGTACAGGTTCTGCAAGGAAGCAGCTTTCCTTTACATCTCCTCCTGTTAAGCCAAGGAGGCGATCTAGTCCTCCATTGGTGAAATACTAG KPNKCKNKWFQEEESVDVISFLEQSQLEVLAQPPMIETSELAHLEAAEPSLAEAQLAVDARRALRALKASMRLKALAQGQSVKRQVAHTLKYMQTITHLQAEIHKRRIRMSEENQSLHRQLYKKREKHVEKLKSSMDNDWNHSTQSKAQIEAKLLNKQVGALRRERALAYAYSHQPTWKFFSRTATPSFMDPNNPHWGWSWLERWMAARPWELRITDEQLDHISVMSIATRASVVDIIQICARRDQIFYTKPSLRSPTSQLHRHHSSSTSKPLSPSSSRNKKNAANSGISSWGAYDVNSKLFRRHTIGGSSLKDDTTIASSPSVSSHTTPSKAAKTPSRFASSSRTEKKGTMEKGSTSTGSARKQLSFTSPPVKPRRRSSPPLVKY
BLAST of Cp4.1LG01g14950 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.6e-43 Identity = 141/340 (41.47%), Postives = 198/340 (58.24%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.8e-08 Identity = 80/295 (27.12%), Postives = 134/295 (45.42%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TrEMBL
Match: A0A0A0KV14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623510 PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 5.2e-118 Identity = 271/439 (61.73%), Postives = 304/439 (69.25%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TrEMBL
Match: A0A061FMJ5_THECC (IQ-domain 3 isoform 1 OS=Theobroma cacao GN=TCM_043085 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70 Identity = 172/336 (51.19%), Postives = 221/336 (65.77%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TrEMBL
Match: A0A061FNT1_THECC (IQ-domain 3 isoform 3 OS=Theobroma cacao GN=TCM_043085 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70 Identity = 172/336 (51.19%), Postives = 221/336 (65.77%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TrEMBL
Match: A0A061FUS1_THECC (IQ-domain 3 isoform 5 OS=Theobroma cacao GN=TCM_043085 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70 Identity = 172/336 (51.19%), Postives = 221/336 (65.77%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TrEMBL
Match: F6HNI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03890 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70 Identity = 177/343 (51.60%), Postives = 225/343 (65.60%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TAIR10
Match: AT5G03040.1 (AT5G03040.1 IQ-domain 2) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50 Identity = 138/332 (41.57%), Postives = 204/332 (61.45%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TAIR10
Match: AT3G52290.1 (AT3G52290.1 IQ-domain 3) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44 Identity = 133/329 (40.43%), Postives = 187/329 (56.84%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TAIR10
Match: AT3G09710.2 (AT3G09710.2 IQ-domain 1) HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43 Identity = 144/352 (40.91%), Postives = 200/352 (56.82%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TAIR10
Match: AT2G26410.1 (AT2G26410.1 IQ-domain 4) HSP 1 Score: 132.5 bits (332), Expect = 5.6e-31 Identity = 112/333 (33.63%), Postives = 166/333 (49.85%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. TAIR10
Match: AT2G33990.1 (AT2G33990.1 IQ-domain 9) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23 Identity = 64/161 (39.75%), Postives = 99/161 (61.49%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. NCBI nr
Match: gi|659092108|ref|XP_008446903.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo]) HSP 1 Score: 446.4 bits (1147), Expect = 5.0e-122 Identity = 280/439 (63.78%), Postives = 315/439 (71.75%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. NCBI nr
Match: gi|778706681|ref|XP_011655891.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus]) HSP 1 Score: 432.6 bits (1111), Expect = 7.4e-118 Identity = 271/439 (61.73%), Postives = 304/439 (69.25%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. NCBI nr
Match: gi|1009120881|ref|XP_015877163.1| (PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 1 [Ziziphus jujuba]) HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70 Identity = 195/443 (44.02%), Postives = 258/443 (58.24%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. NCBI nr
Match: gi|731412632|ref|XP_010658434.1| (PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]) HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70 Identity = 177/343 (51.60%), Postives = 225/343 (65.60%), Query Frame = 1
BLAST of Cp4.1LG01g14950 vs. NCBI nr
Match: gi|590564730|ref|XP_007009747.1| (IQ-domain 3 isoform 3 [Theobroma cacao]) HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70 Identity = 172/336 (51.19%), Postives = 221/336 (65.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |