Cp4.1LG01g14070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g14070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG01 : 7935730 .. 7937919 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAATACCCTTTCTCTTTCAAGGTACGCCTTCTCCTACCCTTCTCTTCATTGCTCCATTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTTATCTTCGACACTATTGAAGAAAAGCCTTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATATAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTAATGGAGAGGGTGGTTAGCACTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGCTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGATTTTTGATAAAATGATTCGGAATGGTTTGCTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTTTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACGATTGTCACGTTTAATACTATGTTGGATTCTTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAACGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCATTCGATCTCATGGAAGAAATGGTGAATAGAAGAGCTTTCCCTACCTTATCGACTTATAACACTCTCATGTATGGCCTTTGCAAGTGGGGGCAAGTGACAGATGCTAGACTGCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCCTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTAGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTACATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTATTAGAGAATATGGTTCACAATGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACAGTTCTCATTCATGCACATGCAGCTAAGGGAATGATGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTAGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAACATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCACGGCGTGCTTCTGAAGAATCTACATACAGATTTTAAAGTCCATGCAATACAGTGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

mRNA sequence

ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAATACCCTTTCTCTTTCAAGGTACGCCTTCTCCTACCCTTCTCTTCATTGCTCCATTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTTATCTTCGACACTATTGAAGAAAAGCCTTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATATAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTAATGGAGAGGGTGGTTAGCACTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGCTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGATTTTTGATAAAATGATTCGGAATGGTTTGCTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTTTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACGATTGTCACGTTTAATACTATGTTGGATTCTTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAACGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCATTCGATCTCATGGAAGAAATGGTGAATAGAAGAGCTTTCCCTACCTTATCGACTTATAACACTCTCATGTATGGCCTTTGCAAGTGGGGGCAAGTGACAGATGCTAGACTGCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCCTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTAGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTACATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTATTAGAGAATATGGTTCACAATGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACAGTTCTCATTCATGCACATGCAGCTAAGGGAATGATGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTAGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAACATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCACGGCGTGCTTCTGAAGAATCTACATACAGATTTTAAAGTCCATGCAATACAGTGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

Coding sequence (CDS)

ATGACCCTCTGCTTCTGCGTTAGAGCTTCAAAGACCATAGCCGCCACAGCTGCTAAATACCCTTTCTCTTTCAAGGTACGCCTTCTCCTACCCTTCTCTTCATTGCTCCATTCCTGCACTCTAAACAACTCCATAGCAACCCTATCGGAATCCCATTATAGAGACCTTATCTTCGACACTATTGAAGAAAAGCCTTGGGCCTTTTGCAACAATAACTGGGTCTCCGATCAATATAGTGCCGTGATCATTGACCCTGACTTGTTTATTCGAGTCCTCAATTCCATTCGAATCAGGCCTAGAGTTGCCTTGCGTTTCTTCCGATGGGTCGAGGCGCAGCCCGATTTTAAGGGATCGGAATTTGTGTTCTGTGCTATTCTTGATATTCTTGCTCAGAATAATTTGATGGGTTCTGCGTATTGGGTAATGGAGAGGGTGGTTAGCACTGAAATGCACGGAGTTGTTGATGTTTTAATTGCTGGGCATTTGTGTTTAGAGGCTTCAATTAAGCTTCTTGATATTCTATTGCTGATATGCACGAAGAAATCAATGGTTGATGAATGCTTGTTGATTTTTGATAAAATGATTCGGAATGGTTTGCTGCCTGATGTCAAGAACTGTAATAGGATTCTCAGGGTTTTAAGAGATGAGAATCTCGTGAGTAAAGCTAAAACTGTTTATAGGATGATGGAACAGTTTGGGATTAAGCCAACGATTGTCACGTTTAATACTATGTTGGATTCTTTTTGCAAGGAGGGGCAAGTACATCAAGCTTTAGAGCTTCTGTCAGAGATGCAAAAGAGAGGGTGTTTCCCAAATGATGTAACCTACAACGTGTTGGTCAACGGGTTGTCGAAGAAAGGAAAGCTTGAACAAGCAAAGGAACTTATTGAAGAGATGTTGAATTCTGGACTCAACGTTTCGGCATACACATATAATCCTTTGATCAATGGTTTTTGCAAGAAAGGACTGTTTGTTGAAGCATTCGATCTCATGGAAGAAATGGTGAATAGAAGAGCTTTCCCTACCTTATCGACTTATAACACTCTCATGTATGGCCTTTGCAAGTGGGGGCAAGTGACAGATGCTAGACTGCAGTTTTCTGATATGTTTAAAAGCAACTTTATGCCAGACATCGTTTCGTTCAACATCCTACTGTATGGTTACTGTAGGTCTGGGAGTATAAGTGAGGCCTTTCTCTTGTTTGATGAATTGAAATGCAGAGATCTCGTTCCGACCGTGGTAACATATAATACTCTTATATATGGGCTTTGCAGGTTGGGTTACTTGGATGTTGCTTTAAGGTTGAAAAAGGAAATGATTGATCAAGGGTTATTCCCTGACATCTTTACATATACTATACTGGTTAATGGGTCTTGCAAGTTAGGGAATTTATCAATGGCCAGAGAGTTCTTTGATGAGATGTTGTGCAAGGGGTTGAAGCCTGATCGTTTTGCTTACATTACTCGAATAGTAGGAGAAATGAAGCTCGGTGATACATCTGTAGCATATAGCATGCGAGAAGAAATGTTGGCCGAGGGTATCCCTCCAGATGTCGTCACATACAACGTTTTCGTACATGGACTTTGTGAACAGGGAAACCTTCAAGAGGCGTGTGATCTATTAGAGAATATGGTTCACAATGGTCTTGTTCCAGACCATGTGACGTATACTAGTATCATTAACGCTTTCATGAAAAACGGGCACTTGAGGAAGGCAAGAGAGATTTTCAATGAAATGCTCAGCAAGGGTTTAGCCCCTTCTGTAGTAACATATACAGTTCTCATTCATGCACATGCAGCTAAGGGAATGATGGATCTAGCATTTATGTACTTCTCGAAAATGCTCGAGAAGGGCGTTCCAGCAAACGTAATCACATACAATGCAATAATTAATGGGTTTTGCAAGGTGAGGAGATTAGACGAGGCTTATAAATATTTCGATGAGATGGAAGAAAAAGGAATTCTTCCAAATAAGTTTAGTTATACCATATTAATAAATGAGAACTGCAACATGGATTATTGGGAAGAGGCTCTAAGATTGTACAGAGAAATGCTAGATCGAGAAATTCAACCCGATTCTTTTACGCACGGCGTGCTTCTGAAGAATCTACATACAGATTTTAAAGTCCATGCAATACAGTGTGTAGAGAGTTTGATTCAAAATGTTGAAGATAATGTAAATGGCAGGTGA

Protein sequence

MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLIQNVEDNVNGR
Homology
[Close]
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 4.5e-193
Identity = 338/724 (46.69%), Postives = 489/724 (67.54%), Query Frame = 1 

Query: 1   MTLCF--CVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIF 60
           M LC   C+RAS++  + +     +   R L  FS+L H    ++S ++  ES+Y +LI 
Sbjct: 1   MILCLRLCLRASRSFFSISTTNNNNNLSRFLFRFSTLPHCAASSSSSSSNLESYYANLIL 60

Query: 61  DTIEE--KPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFK 120
            +  +  KP    N  W S Q+  ++ DP+L IRVLN IR++P +A RFF W++ Q D K
Sbjct: 61  SSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVK 120

Query: 121 GSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLL 180
            S   F A+L+ILA+N+LM  AY V ER +   MH + D+LI G      ++KLLD+LL 
Sbjct: 121 QSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLW 180

Query: 181 ICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKP 240
           + TKKSM ++ LL F+KMIR G LP V+NCN +L+VLRD  +++KA  VY  M + GI P
Sbjct: 181 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 240

Query: 241 TIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELI 300
           T++TFNTMLDS  K G + +  ++  EM++R    ++VTYN+L+NG SK GK+E+A+   
Sbjct: 241 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 300

Query: 301 EEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKW 360
            +M  SG  V+ Y++NPLI G+CK+GLF +A+ + +EM+N   +PT STYN  +  LC +
Sbjct: 301 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 360

Query: 361 GQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTY 420
           G++ DAR    ++  S   PD+VS+N L++GY + G   EA LLFD+L+  D+ P++VTY
Sbjct: 361 GRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 420

Query: 421 NTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLC 480
           NTLI GLC  G L+ A RLK+EM  Q +FPD+ TYT LV G  K GNLSMA E +DEML 
Sbjct: 421 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 480

Query: 481 KGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLA-EGIPPDVVTYNVFVHGLCEQGNLQ 540
           KG+KPD +AY TR VGE++LGD+  A+ + EEM+A +   PD+  YNV + GLC+ GNL 
Sbjct: 481 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 540

Query: 541 EACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLI 600
           +A +    +   GLVPDHVTYT++I  +++NG  + AR +++EML K L PSV+TY VLI
Sbjct: 541 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 600

Query: 601 HAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGIL 660
           + HA  G ++ AF Y ++M ++GV  NV+T+NA++ G CK   +DEAY+Y  +MEE+GI 
Sbjct: 601 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 660

Query: 661 PNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCV 720
           PNK+SYT+LI++NC+ + WEE ++LY+EMLD+EI+PD +TH  L K+L  D +   ++ +
Sbjct: 661 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 716

[Close]
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.4e-93
Identity = 213/699 (30.47%), Postives = 351/699 (50.21%), Query Frame = 1 

Query: 41  LNNSIATLSESHYRDLIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPR 100
           +  S++T + S    L+ D    K   F   +     + +    P+    +L   +    
Sbjct: 8   IRRSLSTFASSPSDSLLAD----KALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQA 67

Query: 101 VALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLI-- 160
           + L+F  W      F  +    C  L IL +  L  +A  + E V +  +      L+  
Sbjct: 68  LILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 127

Query: 161 ----AGHLCLEASIKLLDILLLICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRIL-RVL 220
                  LC   S  + D+++   ++ S++D+ L I      +G +P V + N +L   +
Sbjct: 128 SLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 187

Query: 221 RDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPND 280
           R +  +S A+ V++ M +  + P + T+N ++  FC  G +  AL L  +M+ +GC PN 
Sbjct: 188 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 247

Query: 281 VTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEE 340
           VTYN L++G  K  K++   +L+  M   GL  +  +YN +ING C++G   E   ++ E
Sbjct: 248 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 307

Query: 341 MVNRRAFPTLS-TYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSG 400
           M NRR +     TYNTL+ G CK G    A +  ++M +    P ++++  L++  C++G
Sbjct: 308 M-NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 367

Query: 401 SISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYT 460
           +++ A    D+++ R L P   TY TL+ G  + GY++ A R+ +EM D G  P + TY 
Sbjct: 368 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 427

Query: 461 ILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAE 520
            L+NG C  G +  A    ++M  KGL PD  +Y T + G  +  D   A  ++ EM+ +
Sbjct: 428 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 487

Query: 521 GIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKA 580
           GI PD +TY+  + G CEQ   +EACDL E M+  GL PD  TYT++INA+   G L KA
Sbjct: 488 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 547

Query: 581 REIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSKML-EKGVPANVITYN---- 640
            ++ NEM+ KG+ P VVTY+VLI+    +     A     K+  E+ VP++V TY+    
Sbjct: 548 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIE 607

Query: 641 -----------AIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEE 700
                      ++I GFC    + EA + F+ M  K   P+  +Y I+I+ +C      +
Sbjct: 608 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 667

Query: 701 ALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCV 716
           A  LY+EM+       + T   L+K LH + KV+ +  V
Sbjct: 668 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697

[Close]
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 172/505 (34.06%), Postives = 288/505 (57.03%), Query Frame = 1 

Query: 190 IFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFC 249
           ++ ++ R+G+  +V   N ++  L  +  + K  T    +++ G+ P IVT+NT++ ++ 
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 250 KEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAY 309
            +G + +A EL++ M  +G  P   TYN ++NGL K GK E+AKE+  EML SGL+  + 
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 310 TYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDM 369
           TY  L+   CKKG  VE   +  +M +R   P L  ++++M    + G +  A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 370 FKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYL 429
            ++  +PD V + IL+ GYCR G IS A  L +E+  +     VVTYNT+++GLC+   L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 430 DVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITR 489
             A +L  EM ++ LFPD +T TIL++G CKLGNL  A E F +M  K ++ D   Y T 
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 490 IVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGL 549
           + G  K+GD   A  +  +M+++ I P  ++Y++ V+ LC +G+L EA  + + M+   +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 550 VPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFM 609
            P  +   S+I  + ++G+         +M+S+G  P  ++Y  LI+    +  M  AF 
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 610 YFSKMLEK--GVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINE 669
              KM E+  G+  +V TYN+I++GFC+  ++ EA     +M E+G+ P++ +YT +IN 
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 670 NCNMDYWEEALRLYREMLDREIQPD 693
             + D   EA R++ EML R   PD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPD 726

[Close]
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.5e-84
Identity = 178/501 (35.53%), Postives = 272/501 (54.29%), Query Frame = 1 

Query: 201 PDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALEL 260
           P  K+ N +L +L   N    A  V+  M    I PT+ TF  ++ +FC   ++  AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 261 LSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCK 320
           L +M K GC PN V Y  L++ LSK  ++ +A +L+EEM   G    A T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 321 KGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVS 380
                EA  ++  M+ R   P   TY  LM GLCK G+V  A+    D+F     P+IV 
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVI 359

Query: 381 FNILLYGYCRSGSISEA-FLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEM 440
           FN L++G+   G + +A  +L D +    +VP V TYN+LIYG  + G + +AL +  +M
Sbjct: 360 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 419

Query: 441 IDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDT 500
            ++G  P++++YTILV+G CKLG +  A    +EM   GLKP+   +   I    K    
Sbjct: 420 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 479

Query: 501 SVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSI 560
             A  +  EM  +G  PDV T+N  + GLCE   ++ A  LL +M+  G+V + VTY ++
Sbjct: 480 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 539

Query: 561 INAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSKMLEKGV 620
           INAF++ G +++AR++ NEM+ +G     +TY  LI      G +D A   F KML  G 
Sbjct: 540 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 599

Query: 621 PANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALR 680
             + I+ N +ING C+   ++EA ++  EM  +G  P+  ++  LIN  C     E+ L 
Sbjct: 600 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 659

Query: 681 LYREMLDREIQPDSFTHGVLL 701
           ++R++    I PD+ T   L+
Sbjct: 660 MFRKLQAEGIPPDTVTFNTLM 676

[Close]
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.6e-83
Identity = 184/631 (29.16%), Postives = 317/631 (50.24%), Query Frame = 1 

Query: 78  YSAVIIDPDLFIRVLNSIRIRP--RVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLM 137
           +SA +   D  +++L+S+R +P    ALR F     +P+F     ++  IL  L ++   
Sbjct: 42  HSAALSSTD--VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 101

Query: 138 GSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLIFDKMI 197
                ++E + S+                E       IL+    +  + DE L + D MI
Sbjct: 102 DDMKKILEDMKSSRC--------------EMGTSTFLILIESYAQFELQDEILSVVDWMI 161

Query: 198 RN-GLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQV 257
              GL PD    NR+L +L D N +   +  +  M  +GIKP + TFN ++ + C+  Q+
Sbjct: 162 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 221

Query: 258 HQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPL 317
             A+ +L +M   G  P++ T+  ++ G  ++G L+ A  + E+M+  G + S  + N +
Sbjct: 222 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 281

Query: 318 INGFCKKGLFVEAFDLMEEMVNRRAF-PTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSN 377
           ++GFCK+G   +A + ++EM N+  F P   T+NTL+ GLCK G V  A      M +  
Sbjct: 282 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 341

Query: 378 FMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVAL 437
           + PD+ ++N ++ G C+ G + EA  + D++  RD  P  VTYNTLI  LC+   ++ A 
Sbjct: 342 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 401

Query: 438 RLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGE 497
            L + +  +G+ PD+ T+  L+ G C   N  +A E F+EM  KG +PD F Y   I   
Sbjct: 402 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 461

Query: 498 MKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDH 557
              G    A +M ++M   G    V+TYN  + G C+    +EA ++ + M  +G+  + 
Sbjct: 462 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 521

Query: 558 VTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSK 617
           VTY ++I+   K+  +  A ++ ++M+ +G  P   TY  L+      G +  A      
Sbjct: 522 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 581

Query: 618 MLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDY 677
           M   G   +++TY  +I+G CK  R++ A K    ++ KGI     +Y  +I        
Sbjct: 582 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 641

Query: 678 WEEALRLYREMLDR-EIQPDSFTHGVLLKNL 704
             EA+ L+REML++ E  PD+ ++ ++ + L
Sbjct: 642 TTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656

[Close]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match: A0A0A0KR97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611050 PE=4 SV=1)

HSP 1 Score: 1273.1 bits (3293), Expect = 0.0e+00
Identity = 621/729 (85.19%), Postives = 668/729 (91.63%), Query Frame = 1 

Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK I   AA YPF FKVR L PFSS LHSCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFC NNWVSDQ+ AVI DP LFIRVL+S+RIRPRVALRFFRWV AQPDFK SEF
Sbjct: 61  IKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL  N+LM +AYWVMERVVS EMHGVVDVLIAGH+C + SIKLLDILLLI TK
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVCSKDSIKLLDILLLIYTK 180

Query: 181 KSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLL+FDKMIRNGLLPDVKNCNRILRVLRDENL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFC+KGLFVEAFDL+EEMVNRRAFPTLSTYNTLMYGLCKW QVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
             RL+FSDM KS F PDIVSFN LLYGYCR+G ISEAFLLFDELKCRDLVPTV+TYNTLI
Sbjct: 361 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           +GLC  GYLD ALRLKKEM DQGLFPDIFTYTILVNG  KLG +SMAR FF+EML KGLK
Sbjct: 421 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAY TRIVGEMK+ DTSVA+SM+EEMLA G PPDV+TYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GL+PDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K M+DLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLIQ 720
           YTILINE+CNM YWEEALRLYREMLDR+IQPDSFTH V LKNLH D++VHA+QCVESLIQ
Sbjct: 661 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDN+N R
Sbjct: 721 NVEDNINVR 729

[Close]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match: A0A0D2NFM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G194300 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 3.8e-279
Identity = 478/735 (65.03%), Postives = 594/735 (80.82%), Query Frame = 1 

Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFS-SLLHSCTL---------NNSIATLSE 60
           MTLC   RASK++A T A    + KVR L P S SLLHS            ++S ++ SE
Sbjct: 1   MTLCI-KRASKSLA-TIAPLSLTCKVRFLFPSSFSLLHSLPSPSSPPEPDSSSSSSSSSE 60

Query: 61  SHYRDLIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVE 120
           +HY+ LIF+TI+EKPWAFCNN WVS+++ A+I+DP LFI+VLN +R RPR+ALRFFRWVE
Sbjct: 61  THYKQLIFNTIDEKPWAFCNNKWVSNKFHAIIVDPHLFIKVLNLMRERPRIALRFFRWVE 120

Query: 121 AQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKL 180
            QP  K SE VF  +LDIL +NNL+ SAYWVMERV+   MHG+VDVLI G+L  EAS+KL
Sbjct: 121 MQPGVKRSELVFSVMLDILVENNLLRSAYWVMERVIKFHMHGIVDVLICGYLKFEASVKL 180

Query: 181 LDILLLICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMME 240
           LD+LLL+C+KK MVD CL IFDKM+R GLLPDVKNCNRIL +LRD++LV+KA  VYRMM+
Sbjct: 181 LDLLLLVCSKKLMVDHCLWIFDKMVRTGLLPDVKNCNRILTMLRDKSLVAKASQVYRMMK 240

Query: 241 QFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLE 300
           +FGIKPTI+T+NTMLDSFCKEG+V QA+ELLSEM+   CFPNDVTYNVL+NGL+K  KLE
Sbjct: 241 EFGIKPTIITYNTMLDSFCKEGEVQQAIELLSEMR---CFPNDVTYNVLINGLTKNCKLE 300

Query: 301 QAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLM 360
           QA+ LI EML  G+ VSAYTYNPLI G+ KKGL VEA +L E+MV+     T++TYNT M
Sbjct: 301 QAEGLIREMLKLGIKVSAYTYNPLICGYFKKGLLVEALNLGEQMVSNGVVHTVATYNTFM 360

Query: 361 YGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLV 420
           YGLC+WG++ DAR QF+DM K N +PDIVS+N L+Y YCR G+ISEAFLLF+EL+CR LV
Sbjct: 361 YGLCRWGRLDDARQQFNDMLKRNMIPDIVSYNTLIYWYCRIGNISEAFLLFNELRCRRLV 420

Query: 421 PTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREF 480
           PTVVTYNTLI GLCR+G LD+A  LK  MI QG+FPD++TYTILVNGS KLGNLS AR+ 
Sbjct: 421 PTVVTYNTLIDGLCRVGDLDLARYLKDTMITQGIFPDVYTYTILVNGSYKLGNLSAARDL 480

Query: 481 FDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCE 540
           FDEML  GL+PD FAY T++VGE+K GD + A+SM E+M+A+ +PPD++ YNVFVH   +
Sbjct: 481 FDEMLHNGLEPDGFAYATQVVGELKHGDPARAFSMEEQMIAKELPPDLIIYNVFVHWHSK 540

Query: 541 QGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVT 600
             + +EAC+LL  M+  GL+PDHVTYT+II+A+++NGHLRKARE+F+EMLSKGL+PSVVT
Sbjct: 541 LRDFKEACNLLHKMISIGLIPDHVTYTTIIHAYLENGHLRKAREMFHEMLSKGLSPSVVT 600

Query: 601 YTVLIHAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEME 660
           YT+L+H HAAKG + LAFMYFS+M EKGV  NVITYNA+ING CKVRR+ +AYK+F EME
Sbjct: 601 YTILVHGHAAKGFLSLAFMYFSEMQEKGVQPNVITYNAMINGLCKVRRIGQAYKFFAEME 660

Query: 661 EKGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVH 720
            KGILPNK+SYTILINENC++  WEE+LRLY+EMLDREI PDS TH  LLK L+ D  ++
Sbjct: 661 AKGILPNKYSYTILINENCDVGNWEESLRLYQEMLDREILPDSCTHNALLKQLNNDCNLN 720

Query: 721 AIQCVESLIQNVEDN 726
           A++ +E+LI   +++
Sbjct: 721 AVRQLETLILECKES 730

[Close]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match: A0A0B0NNM2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09096 PE=4 SV=1)

HSP 1 Score: 964.9 bits (2493), Expect = 5.5e-278
Identity = 478/730 (65.48%), Postives = 591/730 (80.96%), Query Frame = 1 

Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFS-SLLHSC----------TLNNSIATLS 60
           MTLC   RASK++A T A    + KVR L PFS SLLHS           + ++S ++ S
Sbjct: 1   MTLCI-KRASKSLA-TIAPLSLTCKVRFLFPFSFSLLHSLPSPSSPPEPDSSSSSSSSSS 60

Query: 61  ESHYRDLIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWV 120
           E+HY+ LIF+TI+EKPWAFCN  WVS+++ A+I+DP LFI+VLN +R RPR+ALRFFRWV
Sbjct: 61  ETHYKQLIFNTIDEKPWAFCNTKWVSNKFHAIIVDPHLFIKVLNLMRERPRIALRFFRWV 120

Query: 121 EAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIK 180
           E QP  K SE VF  +LDIL +NNL+ SAYWVMERV++  MHG+VDVLI G+L  E S+K
Sbjct: 121 EMQPGVKRSELVFSVMLDILVENNLLRSAYWVMERVITFHMHGIVDVLICGYLKFEVSVK 180

Query: 181 LLDILLLICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMM 240
           LLD+LLL+C+KK MVD CL IFDKMIR GLLPDVKNCNRIL +LRD++LV+KA  VYRMM
Sbjct: 181 LLDLLLLVCSKKLMVDHCLWIFDKMIRTGLLPDVKNCNRILTMLRDKSLVAKASQVYRMM 240

Query: 241 EQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKL 300
           ++FGIKPTIVT+NTMLDSFCKEG+V QA+ELLSEM+   CFPNDVTYNVL+NGL+K  KL
Sbjct: 241 KEFGIKPTIVTYNTMLDSFCKEGEVQQAIELLSEMR---CFPNDVTYNVLINGLTKNCKL 300

Query: 301 EQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTL 360
           +QA+ LI EML  G+ VSAYTYNPLI G+ KKGL VEA +L E+MVN     T++TYNT 
Sbjct: 301 DQAEGLIREMLKLGIKVSAYTYNPLICGYFKKGLLVEALNLGEQMVNNGVVHTVATYNTF 360

Query: 361 MYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDL 420
           MYGLC+WG++ DAR QF+DM K N +PD+VS+N L+Y YCR G+I EAFLLFDEL+CR L
Sbjct: 361 MYGLCRWGRLDDARQQFNDMLKRNMIPDVVSYNTLIYWYCRIGNIWEAFLLFDELRCRRL 420

Query: 421 VPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMARE 480
           VPTVVTYNTLI GLCR+G LD+A  LK  MI QG+FPD++TYTILVNGS KLGNLS AR+
Sbjct: 421 VPTVVTYNTLIDGLCRVGDLDLARYLKDTMITQGIFPDVYTYTILVNGSYKLGNLSAARD 480

Query: 481 FFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLC 540
            F+EML  GL+PDRFAY T++VGE+K GD + A+SM E+M+A+ +PPD++ YNVFVH   
Sbjct: 481 LFNEMLHNGLEPDRFAYTTQVVGELKHGDPARAFSMEEQMVAKELPPDLIIYNVFVHWHS 540

Query: 541 EQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVV 600
           +  + +EAC+LL  M+  GL+PDHVTYT+II+A+++NGHLRKARE+F+EMLSKGL+PSVV
Sbjct: 541 KLRDFKEACNLLHKMISIGLIPDHVTYTTIIHAYLENGHLRKAREMFHEMLSKGLSPSVV 600

Query: 601 TYTVLIHAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEM 660
           TYT+LIH HAAKG + LAFMYFS+M EKGV  NVITYNA+ING CKVRR+ +AYK+F EM
Sbjct: 601 TYTILIHGHAAKGFLSLAFMYFSEMQEKGVQPNVITYNAMINGLCKVRRICQAYKFFAEM 660

Query: 661 EEKGILPNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKV 720
           E KGILPNK+SYTILINEN ++  WEE+LRLY+EMLDREI PDS TH  LLK L+ D  +
Sbjct: 661 EAKGILPNKYSYTILINENSDVGNWEESLRLYQEMLDREILPDSCTHNALLKQLNKDCNL 720

[Close]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match: A0A067FBL4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004814mg PE=4 SV=1)

HSP 1 Score: 960.3 bits (2481), Expect = 1.3e-276
Identity = 463/729 (63.51%), Postives = 584/729 (80.11%), Query Frame = 1 

Query: 3   LCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHS----CTLNNSIATL---SESHYRD 62
           +  C+RASK ++A +  Y +  KVR   PF   +H+       NN  + L   SES+Y++
Sbjct: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60

Query: 63  LIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDF 122
           LI  T+EEKPWAFCNN WVSD + AV+ DP+L +RVLN IR +PR+ALRFFRWVE QP  
Sbjct: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120

Query: 123 KGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILL 182
           K  EFVFC IL+IL ++ L+ SAYWV+E VV   MHG++DVLI G L    SIK+LD+LL
Sbjct: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180

Query: 183 LICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIK 242
           LI TKKSMV++CLL+F+KM+RNGLLPDVKNCNRI++VLRD     KA+ VYRMM +FGIK
Sbjct: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240

Query: 243 PTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKEL 302
           P+IVT+NTMLDSFCKEG++ +ALELL EMQ RGC PN VTYNVL+ G S+ G+LEQA+ L
Sbjct: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300

Query: 303 IEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCK 362
           I +ML  GL VSA++YNP+I G+ +KGL VEA +L EEMV R   PTL+TYN L+YGLCK
Sbjct: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360

Query: 363 WGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVT 422
           WG+V+DAR +F +M + N +PDI+S+N LLYGYCRSG+I EAFLLFDEL+ R+LVPTVVT
Sbjct: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420

Query: 423 YNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEML 482
           YNTLI GLCR G L+VA +LK+ MI+QG+ PD+ TYTI+VNGSCK+GNLSMAREFF+EML
Sbjct: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480

Query: 483 CKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQ 542
            KGL+PDRFAY T+I GE+KLGDTS AY ++EEMLA+G PPD++TYNV VHGLC+ G+L+
Sbjct: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540

Query: 543 EACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLI 602
           EA +LL  MV +G +PDH+TYTSII+A ++ G LR+ R++FN ML KGL+P++VTYTVLI
Sbjct: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600

Query: 603 HAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGIL 662
           HAHAA+G ++LAFMYFS+M  KG+  NVITYNA+ING C++RR+D+AY  F +MEE+GIL
Sbjct: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660

Query: 663 PNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTH-GVLLKNLHTDFKVHAIQC 722
           PNK++YTILINENCN   W+EALRLY+EMLDREI+PD  TH  +LLK L  D+KVHA++ 
Sbjct: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720

Query: 723 VESLIQNVE 724
           +ESL    E
Sbjct: 721 LESLTLGAE 729

[Close]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match: F6HFL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04390 PE=4 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 4.6e-269
Identity = 455/719 (63.28%), Postives = 573/719 (79.69%), Query Frame = 1 

Query: 3   LCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIFDTIE 62
           +  C+RASK  A+       S KVRLL P S   H  T N+S    SE+H++D+I  +I 
Sbjct: 1   MTLCLRASK--ASATINPTRSIKVRLLFPCSFSFHDSTSNHSAPPFSETHFQDVISKSIR 60

Query: 63  EKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEFVF 122
           EKP  F N  W+S Q+  VI+DPDLF+RVL+S R  PR+ALR FRW E+QP F+ SEFVF
Sbjct: 61  EKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVF 120

Query: 123 CAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKS 182
           CAIL+ILAQNNLM SAYWVMERV++  MH +VDVLI G +  E S+K+LD+L+ + +KKS
Sbjct: 121 CAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKS 180

Query: 183 MVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFN 242
           MV++CL +FDKMI++ L PDVKNCNRILR+LRD++L+SKA  VYR M +FGIKPTIVT+N
Sbjct: 181 MVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYN 240

Query: 243 TMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNS 302
           T+LDS+CK G+V Q L+LLSEMQ+RGC PNDVTYNVL+NGLSKKG+ EQAK LI EML +
Sbjct: 241 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT 300

Query: 303 GLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDA 362
           GL VSAYTYNPLI G+  KG+  EA  L EEMV + A PT++TYN+ +YGLCK G+++DA
Sbjct: 301 GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 360

Query: 363 RLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYG 422
             Q SDM  +N +PD+VS+N L+YGYCR G++ +AFLLFDEL+   L PT+VTYNTL+ G
Sbjct: 361 MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDG 420

Query: 423 LCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPD 482
           LCR G L+VA +LK EMI++G+ PDI TYTILVNGSCK+G+LSMA+EFFDEML +GL+ D
Sbjct: 421 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 480

Query: 483 RFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLE 542
            +AY TRIVGE+KLGDTS A+S++EEMLA+G PPD++ YNV V GLC+ GNL+EA +LL+
Sbjct: 481 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 540

Query: 543 NMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKG 602
            MV +G++PD+VTYTSII+A ++NG LRK REIF EMLSKGL PSVVTYTVLIH HA KG
Sbjct: 541 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 600

Query: 603 MMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYT 662
            ++ AF+YFS+M EKG+  NVITYN++ING CKVRR+D+AY +F EM EKGI PNK+SYT
Sbjct: 601 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYT 660

Query: 663 ILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLIQN 722
           ILINENCNM  W+EAL LY++MLDR +QPDS TH  LLK L  D K+ A++ +ESL+ +
Sbjct: 661 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717

[Close]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match: AT1G22960.1 (AT1G22960.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 676.0 bits (1743), Expect = 2.6e-194
Identity = 338/724 (46.69%), Postives = 489/724 (67.54%), Query Frame = 1 

Query: 1   MTLCF--CVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIF 60
           M LC   C+RAS++  + +     +   R L  FS+L H    ++S ++  ES+Y +LI 
Sbjct: 1   MILCLRLCLRASRSFFSISTTNNNNNLSRFLFRFSTLPHCAASSSSSSSNLESYYANLIL 60

Query: 61  DTIEE--KPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFK 120
            +  +  KP    N  W S Q+  ++ DP+L IRVLN IR++P +A RFF W++ Q D K
Sbjct: 61  SSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVK 120

Query: 121 GSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLL 180
            S   F A+L+ILA+N+LM  AY V ER +   MH + D+LI G      ++KLLD+LL 
Sbjct: 121 QSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLW 180

Query: 181 ICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKP 240
           + TKKSM ++ LL F+KMIR G LP V+NCN +L+VLRD  +++KA  VY  M + GI P
Sbjct: 181 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 240

Query: 241 TIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELI 300
           T++TFNTMLDS  K G + +  ++  EM++R    ++VTYN+L+NG SK GK+E+A+   
Sbjct: 241 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 300

Query: 301 EEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKW 360
            +M  SG  V+ Y++NPLI G+CK+GLF +A+ + +EM+N   +PT STYN  +  LC +
Sbjct: 301 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 360

Query: 361 GQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTY 420
           G++ DAR    ++  S   PD+VS+N L++GY + G   EA LLFD+L+  D+ P++VTY
Sbjct: 361 GRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 420

Query: 421 NTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLC 480
           NTLI GLC  G L+ A RLK+EM  Q +FPD+ TYT LV G  K GNLSMA E +DEML 
Sbjct: 421 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 480

Query: 481 KGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLA-EGIPPDVVTYNVFVHGLCEQGNLQ 540
           KG+KPD +AY TR VGE++LGD+  A+ + EEM+A +   PD+  YNV + GLC+ GNL 
Sbjct: 481 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 540

Query: 541 EACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLI 600
           +A +    +   GLVPDHVTYT++I  +++NG  + AR +++EML K L PSV+TY VLI
Sbjct: 541 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 600

Query: 601 HAHAAKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGIL 660
           + HA  G ++ AF Y ++M ++GV  NV+T+NA++ G CK   +DEAY+Y  +MEE+GI 
Sbjct: 601 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 660

Query: 661 PNKFSYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCV 720
           PNK+SYT+LI++NC+ + WEE ++LY+EMLD+EI+PD +TH  L K+L  D +   ++ +
Sbjct: 661 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 716

[Close]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 345.5 bits (885), Expect = 7.9e-95
Identity = 213/699 (30.47%), Postives = 351/699 (50.21%), Query Frame = 1 

Query: 41  LNNSIATLSESHYRDLIFDTIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPR 100
           +  S++T + S    L+ D    K   F   +     + +    P+    +L   +    
Sbjct: 8   IRRSLSTFASSPSDSLLAD----KALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQA 67

Query: 101 VALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLI-- 160
           + L+F  W      F  +    C  L IL +  L  +A  + E V +  +      L+  
Sbjct: 68  LILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 127

Query: 161 ----AGHLCLEASIKLLDILLLICTKKSMVDECLLIFDKMIRNGLLPDVKNCNRIL-RVL 220
                  LC   S  + D+++   ++ S++D+ L I      +G +P V + N +L   +
Sbjct: 128 SLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 187

Query: 221 RDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALELLSEMQKRGCFPND 280
           R +  +S A+ V++ M +  + P + T+N ++  FC  G +  AL L  +M+ +GC PN 
Sbjct: 188 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 247

Query: 281 VTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEE 340
           VTYN L++G  K  K++   +L+  M   GL  +  +YN +ING C++G   E   ++ E
Sbjct: 248 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 307

Query: 341 MVNRRAFPTLS-TYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVSFNILLYGYCRSG 400
           M NRR +     TYNTL+ G CK G    A +  ++M +    P ++++  L++  C++G
Sbjct: 308 M-NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 367

Query: 401 SISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYT 460
           +++ A    D+++ R L P   TY TL+ G  + GY++ A R+ +EM D G  P + TY 
Sbjct: 368 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 427

Query: 461 ILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDTSVAYSMREEMLAE 520
            L+NG C  G +  A    ++M  KGL PD  +Y T + G  +  D   A  ++ EM+ +
Sbjct: 428 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 487

Query: 521 GIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSIINAFMKNGHLRKA 580
           GI PD +TY+  + G CEQ   +EACDL E M+  GL PD  TYT++INA+   G L KA
Sbjct: 488 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 547

Query: 581 REIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSKML-EKGVPANVITYN---- 640
            ++ NEM+ KG+ P VVTY+VLI+    +     A     K+  E+ VP++V TY+    
Sbjct: 548 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIE 607

Query: 641 -----------AIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEE 700
                      ++I GFC    + EA + F+ M  K   P+  +Y I+I+ +C      +
Sbjct: 608 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 667

Query: 701 ALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCV 716
           A  LY+EM+       + T   L+K LH + KV+ +  V
Sbjct: 668 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697

[Close]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-89
Identity = 172/505 (34.06%), Postives = 288/505 (57.03%), Query Frame = 1 

Query: 190 IFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFC 249
           ++ ++ R+G+  +V   N ++  L  +  + K  T    +++ G+ P IVT+NT++ ++ 
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 250 KEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAY 309
            +G + +A EL++ M  +G  P   TYN ++NGL K GK E+AKE+  EML SGL+  + 
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 310 TYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDM 369
           TY  L+   CKKG  VE   +  +M +R   P L  ++++M    + G +  A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 370 FKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYL 429
            ++  +PD V + IL+ GYCR G IS A  L +E+  +     VVTYNT+++GLC+   L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 430 DVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITR 489
             A +L  EM ++ LFPD +T TIL++G CKLGNL  A E F +M  K ++ D   Y T 
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 490 IVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGL 549
           + G  K+GD   A  +  +M+++ I P  ++Y++ V+ LC +G+L EA  + + M+   +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 550 VPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFM 609
            P  +   S+I  + ++G+         +M+S+G  P  ++Y  LI+    +  M  AF 
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 610 YFSKMLEK--GVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINE 669
              KM E+  G+  +V TYN+I++GFC+  ++ EA     +M E+G+ P++ +YT +IN 
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701

Query: 670 NCNMDYWEEALRLYREMLDREIQPD 693
             + D   EA R++ EML R   PD
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPD 726

[Close]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 313.9 bits (803), Expect = 2.6e-85
Identity = 178/501 (35.53%), Postives = 272/501 (54.29%), Query Frame = 1 

Query: 201 PDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQVHQALEL 260
           P  K+ N +L +L   N    A  V+  M    I PT+ TF  ++ +FC   ++  AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 261 LSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPLINGFCK 320
           L +M K GC PN V Y  L++ LSK  ++ +A +L+EEM   G    A T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 321 KGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSNFMPDIVS 380
                EA  ++  M+ R   P   TY  LM GLCK G+V  A+    D+F     P+IV 
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVI 359

Query: 381 FNILLYGYCRSGSISEA-FLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVALRLKKEM 440
           FN L++G+   G + +A  +L D +    +VP V TYN+LIYG  + G + +AL +  +M
Sbjct: 360 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 419

Query: 441 IDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGEMKLGDT 500
            ++G  P++++YTILV+G CKLG +  A    +EM   GLKP+   +   I    K    
Sbjct: 420 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 479

Query: 501 SVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDHVTYTSI 560
             A  +  EM  +G  PDV T+N  + GLCE   ++ A  LL +M+  G+V + VTY ++
Sbjct: 480 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 539

Query: 561 INAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSKMLEKGV 620
           INAF++ G +++AR++ NEM+ +G     +TY  LI      G +D A   F KML  G 
Sbjct: 540 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 599

Query: 621 PANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDYWEEALR 680
             + I+ N +ING C+   ++EA ++  EM  +G  P+  ++  LIN  C     E+ L 
Sbjct: 600 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 659

Query: 681 LYREMLDREIQPDSFTHGVLL 701
           ++R++    I PD+ T   L+
Sbjct: 660 MFRKLQAEGIPPDTVTFNTLM 676

[Close]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 309.7 bits (792), Expect = 4.8e-84
Identity = 184/631 (29.16%), Postives = 317/631 (50.24%), Query Frame = 1 

Query: 78  YSAVIIDPDLFIRVLNSIRIRP--RVALRFFRWVEAQPDFKGSEFVFCAILDILAQNNLM 137
           +SA +   D  +++L+S+R +P    ALR F     +P+F     ++  IL  L ++   
Sbjct: 42  HSAALSSTD--VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 101

Query: 138 GSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTKKSMVDECLLIFDKMI 197
                ++E + S+                E       IL+    +  + DE L + D MI
Sbjct: 102 DDMKKILEDMKSSRC--------------EMGTSTFLILIESYAQFELQDEILSVVDWMI 161

Query: 198 RN-GLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVTFNTMLDSFCKEGQV 257
              GL PD    NR+L +L D N +   +  +  M  +GIKP + TFN ++ + C+  Q+
Sbjct: 162 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 221

Query: 258 HQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEMLNSGLNVSAYTYNPL 317
             A+ +L +M   G  P++ T+  ++ G  ++G L+ A  + E+M+  G + S  + N +
Sbjct: 222 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 281

Query: 318 INGFCKKGLFVEAFDLMEEMVNRRAF-PTLSTYNTLMYGLCKWGQVTDARLQFSDMFKSN 377
           ++GFCK+G   +A + ++EM N+  F P   T+NTL+ GLCK G V  A      M +  
Sbjct: 282 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 341

Query: 378 FMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLIYGLCRLGYLDVAL 437
           + PD+ ++N ++ G C+ G + EA  + D++  RD  P  VTYNTLI  LC+   ++ A 
Sbjct: 342 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 401

Query: 438 RLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLKPDRFAYITRIVGE 497
            L + +  +G+ PD+ T+  L+ G C   N  +A E F+EM  KG +PD F Y   I   
Sbjct: 402 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 461

Query: 498 MKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDLLENMVHNGLVPDH 557
              G    A +M ++M   G    V+TYN  + G C+    +EA ++ + M  +G+  + 
Sbjct: 462 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 521

Query: 558 VTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAAKGMMDLAFMYFSK 617
           VTY ++I+   K+  +  A ++ ++M+ +G  P   TY  L+      G +  A      
Sbjct: 522 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 581

Query: 618 MLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFSYTILINENCNMDY 677
           M   G   +++TY  +I+G CK  R++ A K    ++ KGI     +Y  +I        
Sbjct: 582 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 641

Query: 678 WEEALRLYREMLDR-EIQPDSFTHGVLLKNL 704
             EA+ L+REML++ E  PD+ ++ ++ + L
Sbjct: 642 TTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656

[Close]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match: gi|659091657|ref|XP_008446661.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial [Cucumis melo])

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 636/729 (87.24%), Postives = 679/729 (93.14%), Query Frame = 1 

Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK IA T A YPF FKVR L PFSS LHSCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIATTTAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFCNNNWVSDQ+ AVI DP L IRVL+SIRIRPRVALRFFRWV AQPDFKGSEF
Sbjct: 61  IKEKPWAFCNNNWVSDQFGAVITDPHLLIRVLHSIRIRPRVALRFFRWVMAQPDFKGSEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL QNNLM SAYWVMERVVS EMHGVVD+LIAGH+CL+ASIKLLDILL I TK
Sbjct: 121 VFCAILDILVQNNLMRSAYWVMERVVSIEMHGVVDLLIAGHICLKASIKLLDILLWIYTK 180

Query: 181 KSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLL+FDKMIRNGLLPDVKNCNRILRVLRD+NL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDDNLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFCKKGLFVEAF L+EEM+NRRAFPTLSTYNTLM+GLCKWGQVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFGLVEEMMNRRAFPTLSTYNTLMHGLCKWGQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
           DARL+FSDM  S   PDIVSFNILL+GYCR+G ISEAFLLFDELKCRDLVPTVVTYNTLI
Sbjct: 361 DARLRFSDMLNSKCTPDIVSFNILLHGYCRTGCISEAFLLFDELKCRDLVPTVVTYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           YGLC  GYLDVAL+LKKEM DQGLFPDIFTYTILVNG  KLG+ SMAR+FF+EMLC+GLK
Sbjct: 421 YGLCMWGYLDVALQLKKEMTDQGLFPDIFTYTILVNGCFKLGHSSMARDFFNEMLCQGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAYITRIVGEMK+GDTSVA+SMREEMLA G PPDVVTYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYITRIVGEMKIGDTSVAFSMREEMLAAGFPPDVVTYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GLVPDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVRDGLVPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K M+DLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMARRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLIQ 720
           YTILINE+CNMDYWEEALRLYREMLDR IQPDSFTH VLLKNLH D+KVHA+QCVESLIQ
Sbjct: 661 YTILINESCNMDYWEEALRLYREMLDRNIQPDSFTHSVLLKNLHRDYKVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDNVN R
Sbjct: 721 NVEDNVNAR 729

[Close]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match: gi|778706117|ref|XP_011655805.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial [Cucumis sativus])

HSP 1 Score: 1273.1 bits (3293), Expect = 0.0e+00
Identity = 621/729 (85.19%), Postives = 668/729 (91.63%), Query Frame = 1 

Query: 1   MTLCFCVRASKTIAATAAKYPFSFKVRLLLPFSSLLHSCTLNNSIATLSESHYRDLIFDT 60
           MTLCFCVRASK I   AA YPF FKVR L PFSS LHSCTLNN+IATLSE+HYRDLIFDT
Sbjct: 1   MTLCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHSCTLNNAIATLSETHYRDLIFDT 60

Query: 61  IEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSEF 120
           I+EKPWAFC NNWVSDQ+ AVI DP LFIRVL+S+RIRPRVALRFFRWV AQPDFK SEF
Sbjct: 61  IKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEF 120

Query: 121 VFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICTK 180
           VFCAILDIL  N+LM +AYWVMERVVS EMHGVVDVLIAGH+C + SIKLLDILLLI TK
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVCSKDSIKLLDILLLIYTK 180

Query: 181 KSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIVT 240
           KSMV+ECLL+FDKMIRNGLLPDVKNCNRILRVLRDENL+SKAK VY MMEQFGIKPT+VT
Sbjct: 181 KSMVEECLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVT 240

Query: 241 FNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEML 300
           +NTMLDS+CKEG+V QALELLSEMQ+RGC+PNDVTYNVLVNGLSKKG+LEQAK LIEEML
Sbjct: 241 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 300

Query: 301 NSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQVT 360
           NSGLNVSAYTYNPLINGFC+KGLFVEAFDL+EEMVNRRAFPTLSTYNTLMYGLCKW QVT
Sbjct: 301 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT 360

Query: 361 DARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTLI 420
             RL+FSDM KS F PDIVSFN LLYGYCR+G ISEAFLLFDELKCRDLVPTV+TYNTLI
Sbjct: 361 GVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLI 420

Query: 421 YGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGLK 480
           +GLC  GYLD ALRLKKEM DQGLFPDIFTYTILVNG  KLG +SMAR FF+EML KGLK
Sbjct: 421 HGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLK 480

Query: 481 PDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACDL 540
           PDRFAY TRIVGEMK+ DTSVA+SM+EEMLA G PPDV+TYNVFVH LC+QGN +EACDL
Sbjct: 481 PDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDL 540

Query: 541 LENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHAA 600
           LENMV +GL+PDHVTYTSIIN F+KNGHLRKARE+FNEMLSKG+APSVVTYTVLIHAHAA
Sbjct: 541 LENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAA 600

Query: 601 KGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKFS 660
           K M+DLAFMYFSKMLEK VPANVITYNAIING C  RR+DEAYKYFDEMEEKGILPNKFS
Sbjct: 601 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 660

Query: 661 YTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLIQ 720
           YTILINE+CNM YWEEALRLYREMLDR+IQPDSFTH V LKNLH D++VHA+QCVESLIQ
Sbjct: 661 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 720

Query: 721 NVEDNVNGR 730
           NVEDN+N R
Sbjct: 721 NVEDNINVR 729

[Close]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match: gi|694331013|ref|XP_009356190.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 1004.2 bits (2595), Expect = 1.2e-289
Identity = 482/722 (66.76%), Postives = 594/722 (82.27%), Query Frame = 1 

Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLHSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCARASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD + AVI+DPDLF+RVL  IR RPR+ALRFFRWVE QP FK SE
Sbjct: 61  TIDEKPWAFCNSKWVSDPFQAVIVDPDLFVRVLVEIRSRPRIALRFFRWVEGQPGFKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S  MHG+VDVLI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDVLINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL IFDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAKELI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKELIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQV 362
           + +GL ++A+TYNPLI G+C KGL  EA  L +EMV + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKAGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVVKGANPTVATYNSLMYGLCKWGRI 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N MPDIVS+N L++GYCRSG++  AF+LFDEL+ R   PTVVTYNTL
Sbjct: 361 TDARDQFSNMLNRNIMPDIVSYNTLIHGYCRSGNLGAAFILFDELRHRTFTPTVVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+FPD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRFGDLAVAGQLKKEMTNQGIFPDVFTYTILVNGSCNAGNLSMAKELFDEMLHKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG ++LA+MYFS+M EK +  NVITYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVITYNALINGLCKVMRMDQAYEYFTEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLI 722
           +YTILINENCNM  W+EA RLY++MLDREI+PDS TH  L K+L  DF++HA++ +ESLI
Sbjct: 661 TYTILINENCNMGNWKEAFRLYKQMLDREIKPDSCTHSALFKHLDKDFQLHAVRYLESLI 720

[Close]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match: gi|658062219|ref|XP_008367001.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Malus domestica])

HSP 1 Score: 991.5 bits (2562), Expect = 7.8e-286
Identity = 475/722 (65.79%), Postives = 591/722 (81.86%), Query Frame = 1 

Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLHSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCXRASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD++ AVI+DPDLFIRVL  IR RPR+ALRFFRWVE QP  K SE
Sbjct: 61  TIDEKPWAFCNSKWVSDRFQAVIVDPDLFIRVLVEIRTRPRIALRFFRWVEGQPGLKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S  MHG+VD+LI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDILINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL IFDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAK LI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKGLIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQV 362
           +  GL ++A+TYNPLI G+C KGL  EA  L +EMV + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKXGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVIKGANPTVATYNSLMYGLCKWGRM 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N +PDIVS+N L+YGYCR G++ +AF+LFDEL+ R   PT+VTYNTL
Sbjct: 361 TDARDQFSNMLNRNIVPDIVSYNTLIYGYCRLGNLGDAFILFDELRHRTFTPTIVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+ PD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRSGDLAVAGQLKKEMTNQGICPDVFTYTILVNGSCNAGNLSMAKELFDEMLRKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG ++LA+MYFS+M EK +  NV+TYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVVTYNALINGLCKVMRMDQAYEYFXEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLI 722
           +YTILINENCNM  W+EALRLY++MLDR I+PDS TH  L K+L  DF++HA++ ++SLI
Sbjct: 661 TYTILINENCNMGNWKEALRLYKQMLDRXIEPDSCTHSALFKHLDKDFQLHAVRYLDSLI 720

[Close]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match: gi|657993896|ref|XP_008389244.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like [Malus domestica])

HSP 1 Score: 989.6 bits (2557), Expect = 3.0e-285
Identity = 475/722 (65.79%), Postives = 590/722 (81.72%), Query Frame = 1 

Query: 3   LCFCVRASKTIAATA-AKYPFSFKVRLLLPFSSLLHSCTLNNSIAT--LSESHYRDLIFD 62
           +  C RASK +AATA A +    KVR   P S    +C+   S+ T   SE+ YRDLIFD
Sbjct: 1   MTLCXRASKALAATASAVHHRPLKVRRFSPLSGSFRNCSSTTSLPTAAFSETQYRDLIFD 60

Query: 63  TIEEKPWAFCNNNWVSDQYSAVIIDPDLFIRVLNSIRIRPRVALRFFRWVEAQPDFKGSE 122
           TI+EKPWAFCN+ WVSD++ AVI+DPDLFIRVL  IR RPR+ALRFFRWVE QP  K SE
Sbjct: 61  TIDEKPWAFCNSKWVSDRFQAVIVDPDLFIRVLVEIRTRPRIALRFFRWVEGQPGLKRSE 120

Query: 123 FVFCAILDILAQNNLMGSAYWVMERVVSTEMHGVVDVLIAGHLCLEASIKLLDILLLICT 182
           F FC IL+ILA NNLM  AYWVMERV+S  MHG+VD+LI  ++  + S+KLLD+L  + T
Sbjct: 121 FAFCVILEILAHNNLMRPAYWVMERVISVNMHGIVDILINEYMFSKVSLKLLDLLFWVYT 180

Query: 183 KKSMVDECLLIFDKMIRNGLLPDVKNCNRILRVLRDENLVSKAKTVYRMMEQFGIKPTIV 242
           KK M+++CL IFDKMIRN LLPDVKNCNR+LR+LR+++LV++AK VYRMM + GIKPTIV
Sbjct: 181 KKLMLEQCLSIFDKMIRNRLLPDVKNCNRVLRILRNKHLVTRAKEVYRMMGEAGIKPTIV 240

Query: 243 TFNTMLDSFCKEGQVHQALELLSEMQKRGCFPNDVTYNVLVNGLSKKGKLEQAKELIEEM 302
           T+NTMLDSFCKEG+V QALELLSEMQKRGCFPNDVTYNVL+NGLSKKG+LEQAK LI+EM
Sbjct: 241 TYNTMLDSFCKEGEVQQALELLSEMQKRGCFPNDVTYNVLINGLSKKGELEQAKGLIKEM 300

Query: 303 LNSGLNVSAYTYNPLINGFCKKGLFVEAFDLMEEMVNRRAFPTLSTYNTLMYGLCKWGQV 362
           +  GL ++A+TYNPLI G+C KGL  EA  L +EMV + A PT++TYN+LMYGLCKWG++
Sbjct: 301 MKXGLRITAFTYNPLICGYCNKGLLEEALSLEKEMVIKGANPTVATYNSLMYGLCKWGRM 360

Query: 363 TDARLQFSDMFKSNFMPDIVSFNILLYGYCRSGSISEAFLLFDELKCRDLVPTVVTYNTL 422
           TDAR QFS+M   N +PDIVS+N L+YGYCR G++ +AF+LFDEL+ R   PT+VTYNTL
Sbjct: 361 TDARDQFSNMLNRNIVPDIVSYNTLIYGYCRLGNLGDAFILFDELRHRTFTPTIVTYNTL 420

Query: 423 IYGLCRLGYLDVALRLKKEMIDQGLFPDIFTYTILVNGSCKLGNLSMAREFFDEMLCKGL 482
           + GLCR G L VA +LKKEM +QG+ PD+FTYTILVNGSC  GNLSMA+E FDEML KG+
Sbjct: 421 MDGLCRSGDLAVAGQLKKEMTNQGICPDVFTYTILVNGSCNAGNLSMAKELFDEMLRKGV 480

Query: 483 KPDRFAYITRIVGEMKLGDTSVAYSMREEMLAEGIPPDVVTYNVFVHGLCEQGNLQEACD 542
           +PDRFAY TRIVGE++LGD S A+SM+EE+ A G PPD+ TYN+FV+G+C+ GNL EA  
Sbjct: 481 EPDRFAYNTRIVGELRLGDPSKAFSMQEEIQARGFPPDLFTYNIFVNGICKLGNLDEAYT 540

Query: 543 LLENMVHNGLVPDHVTYTSIINAFMKNGHLRKAREIFNEMLSKGLAPSVVTYTVLIHAHA 602
           LL+ MV +G+VPDH+TYTS+I+A +++G L KARE+F EML+KGL+PSV+TYTVLIHAHA
Sbjct: 541 LLQKMVRDGIVPDHITYTSMIHAHLESGQLMKAREVFYEMLNKGLSPSVITYTVLIHAHA 600

Query: 603 AKGMMDLAFMYFSKMLEKGVPANVITYNAIINGFCKVRRLDEAYKYFDEMEEKGILPNKF 662
           AKG ++LA+MYFS+M EK +  NV+TYNA+ING CKV R+D+AY+YF EMEEKGI PNK+
Sbjct: 601 AKGRLELAYMYFSEMQEKRIWPNVVTYNALINGLCKVMRMDQAYEYFIEMEEKGIAPNKY 660

Query: 663 SYTILINENCNMDYWEEALRLYREMLDREIQPDSFTHGVLLKNLHTDFKVHAIQCVESLI 722
           +YTILINENCNM  W+EALRLY++MLDR I+PDS TH  L K+L  DF++HA++ + SLI
Sbjct: 661 TYTILINENCNMGNWKEALRLYKQMLDRXIEPDSCTHSALFKHLDKDFQLHAVRYLXSLI 720

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g14070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR56_ARATH4.5e-19346.69Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidop... [more]
PP407_ARATH1.4e-9330.47Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP360_ARATH1.8e-8834.06Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH4.5e-8435.53Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PP281_ARATH8.6e-8329.16Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
BLAST of Cp4.1LG01g14070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR97_CUCSA0.0e+0085.19Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611050 PE=4 SV=1[more]
A0A0D2NFM2_GOSRA3.8e-27965.03Uncharacterized protein OS=Gossypium raimondii GN=B456_005G194300 PE=4 SV=1[more]
A0A0B0NNM2_GOSAR5.5e-27865.48Uncharacterized protein OS=Gossypium arboreum GN=F383_09096 PE=4 SV=1[more]
A0A067FBL4_CITSI1.3e-27663.51Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004814mg PE=4 SV=1[more]
F6HFL4_VITVI4.6e-26963.28Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04390 PE=4 SV=... [more]
BLAST of Cp4.1LG01g14070 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22960.12.6e-19446.69 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.17.9e-9530.47 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G01110.11.0e-8934.06 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G64320.12.6e-8535.53 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.14.8e-8429.16 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cp4.1LG01g14070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091657|ref|XP_008446661.1|0.0e+0087.24PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial ... [more]
gi|778706117|ref|XP_011655805.1|0.0e+0085.19PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial ... [more]
gi|694331013|ref|XP_009356190.1|1.2e-28966.76PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-... [more]
gi|658062219|ref|XP_008367001.1|7.8e-28665.79PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-... [more]
gi|657993896|ref|XP_008389244.1|3.0e-28565.79PREDICTED: pentatricopeptide repeat-containing protein At1g22960, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g14070.1Cp4.1LG01g14070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 174..199
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 513..545
score: 2.5E-11coord: 443..474
score: 1.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 309..355
score: 5.0E-15coord: 622..670
score: 8.2E-19coord: 551..598
score: 5.3E-17coord: 236..285
score: 3.9E-20coord: 376..425
score: 5.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 519..552
score: 4.0E-9coord: 449..482
score: 1.7E-8coord: 589..622
score: 1.2E-6coord: 239..272
score: 8.5E-12coord: 379..413
score: 3.5E-8coord: 309..341
score: 5.6E-8coord: 274..306
score: 2.2E-7coord: 624..657
score: 4.7E-12coord: 177..203
score: 0.0012coord: 345..377
score: 3.4E-6coord: 659..693
score: 1.9E-5coord: 414..448
score: 1.9E-9coord: 554..587
score: 7.1
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 587..621
score: 10.753coord: 272..306
score: 12.474coord: 342..376
score: 10.654coord: 622..656
score: 14.776coord: 307..341
score: 12.057coord: 202..236
score: 8.868coord: 482..516
score: 8.21coord: 657..691
score: 11.213coord: 552..586
score: 13.45coord: 167..201
score: 8.517coord: 237..271
score: 13.811coord: 377..411
score: 12.145coord: 412..446
score: 12.496coord: 118..152
score: 5.503coord: 517..551
score: 13.088coord: 447..481
score: 1
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 520..684
score: 4.4E-11coord: 248..359
score: 4.4
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 276..404
score: 8.34E-8coord: 511..686
score: 8.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 75..122
score: 0.0coord: 172..698
score:
NoneNo IPR availablePANTHERPTHR24015:SF724SUBFAMILY NOT NAMEDcoord: 75..122
score: 0.0coord: 172..698
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g14070Cucsa.283190Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g14070CmaCh04G014790Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g14070CmoCh04G015500Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g14070Csa5G611050Cucumber (Chinese Long) v2cpecuB439
Cp4.1LG01g14070MELO3C012287Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g14070CSPI05G25680Wild cucumber (PI 183967)cpecpiB439
Cp4.1LG01g14070MELO3C012287.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g14070CsaV3_5G034750Cucumber (Chinese Long) v3cpecucB0543
Cp4.1LG01g14070Bhi07G001057Wax gourdcpewgoB0557
Cp4.1LG01g14070CsGy5G025110Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g14070Carg01864Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g14070Cucurbita pepo (Zucchini)cpecpeB040
Cp4.1LG01g14070Cucurbita pepo (Zucchini)cpecpeB205
Cp4.1LG01g14070Cucurbita pepo (Zucchini)cpecpeB345
Cp4.1LG01g14070Cucurbita pepo (Zucchini)cpecpeB399
Cp4.1LG01g14070Cucurbita maxima (Rimu)cmacpeB323
Cp4.1LG01g14070Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g14070Cucurbita maxima (Rimu)cmacpeB737
Cp4.1LG01g14070Cucurbita moschata (Rifu)cmocpeB115
Cp4.1LG01g14070Cucurbita moschata (Rifu)cmocpeB285
Cp4.1LG01g14070Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g14070Cucurbita moschata (Rifu)cmocpeB691
Cp4.1LG01g14070Wild cucumber (PI 183967)cpecpiB381
Cp4.1LG01g14070Cucumber (Chinese Long) v2cpecuB381
Cp4.1LG01g14070Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g14070Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g14070Watermelon (Charleston Gray)cpewcgB401
Cp4.1LG01g14070Watermelon (97103) v1cpewmB427
Cp4.1LG01g14070Watermelon (97103) v1cpewmB470
Cp4.1LG01g14070Melon (DHL92) v3.5.1cpemeB395
Cp4.1LG01g14070Cucumber (Gy14) v2cgybcpeB063
Cp4.1LG01g14070Melon (DHL92) v3.6.1cpemedB458
Cp4.1LG01g14070Silver-seed gourdcarcpeB1466
Cp4.1LG01g14070Cucumber (Chinese Long) v3cpecucB0474
Cp4.1LG01g14070Cucumber (Chinese Long) v3cpecucB0539