Cp4.1LG01g13910 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g13910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 7967263 .. 7969623 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATGGTGAAAGGGAAAATATTTGTATAATCTAAAAAATTTATATTGAAAAAAAGAAAAAATCAGCTAACCTTTGTTCTTCCCAGTTACGACCACTGAAGAAGCAGATGCAGCTTTAACGATGATTATAGAGGAGAAACATGAGCCGTTCAACCTTGTAATGGCAAATGCCACTGAATCGAATATGAATGCGCTCTCGATTCTGAATCAAACTGGCATTCCGATCATCTGTAAGATTTCAGAATTCCTATGTTTTTTCTTCCTGGATCTTTCTTTTCGAAGCTATTATGTCTTCAATAATCGTTCTGAAGCTTGCGATTCGAGCAGTGATGTCGCCGGAGAGGGATATGAAGACGTCTGGTAGAGCTATAGCTGAATGGGGCTATCACTTCCTCGAAAAACCGATTTCAATGGAGGATATCGAGCTTGTTTGGCAAATCGTATACAGGAAAATCAGAAACCCTAGGGCGAGGAATTTGGGAGAAAATACGAATCAAGCGAAGAAATCTCACATTGGCGGAATGTTTGGAAGAGTTTCGAACGTTGCAGGAGGAGTAGAGTGGAATCCGATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAAAATGTGGAGACAGAGAAGCGAGATTGAAGCCTTCAGCGACTGTGTTTGATTACCTGGAAACGATGAATGTGGAAGAGAAGACGAACAGAAATGATCGCACACACAAGAGGTCGCGGATTGTTTGGAGCTCGAAATTGCATCGGAAGTTTACAGAAGCATTGAGCAAACTTGGAAATAGAAGTAAATTGCTCGTTCTGTTCATGTTCATCCTGTTTTTGCTGTGAGTTTGATTAAATTGTTCACCGATTTGTTTGATGATTTTTGTGTTCACAGAATCGAGCCCTAAAATTATCCTGAAGATGATGAATGAGCCATCCTTAACGCTTCGCCAAGTCGCAAGTCACCTCCAGGTTCCCTCTAAAATTCATTCTCTCTCTCTGTATGGGAATTAAAGTTCATTACTATTATTATTGATATTGGCCTATTCATGTTTTATTGGCCAAGTATATGATTTTGCGTAGTATATGCTAAAGTACATTAGTATAACCGATCCAATGTATATCAAAACGAGAATAGTTCAACGATAATTAGCATTTAGTTCTTTCTTGTGGGCTTTTGAGGAGTGACAGCATAGGAGGCACTATGTGGTTCCACATGCAAAAAAGACCAAAATTGGATTGGAAGGTTCGATGATTTAGAATCGACGCAAGTCATTATCTCCACAAAATGTTCTTCAAGTCACATCGAACAGGGAAACACGGTCGATCACGTAGTTAACCAATATTTACAAAGGGAATAAAACAAAGAGGGTCACTCCTTTTAGAAACATCTTTAGAAACATGTCTGTTAGAGGTTTAACAGCAAATGTTCTAAGTGTTCATATTGAAAAACTATTATATTTTATCTTGCATTTCATTTTAGCAATAAATTTCCCTTTTTGAGTTCTATCACTAACTTTGCTTCTGATTTTCAGAAATTCAAATCTCAAGTGAAGCATTTAAACAAGATGACAGAAAGTGATGCATGCACTTCACTTGGCACAAACCAAGTTCAAGAGTTACCAACAAAGTGCAATAGCATGACAAACATATTAGGCCAACCAAGTTACAGCTCAAACATTACAGGCAACCAGCTGAGACAACTACAGGTCCCGAGCTGCTTGAATGCTCATAGACTGCCTTCTCAAGATGTTTTTAATTGTCATCTCAGGATGATGAACCAGCAAAACTCATGTTCATATAAAAGTACTTATGGAGGCTTTGAAGGGCCAAACCTCGTTGACGACAACAACCGTATCTTCACCGACGAGCTTTACAAGAACGAAAGTTTATCTCATTCCAACTTCCAATACTTTGGTGGGGATCATGAAGATTGTCCCTTCCTTTCAGCTGATAATCACTACCCACATGCAGTTCAAGAGTTGGAATTTGCTCAGAACATGGCGGGCTGTTATGATGTTGACAATATCAGGTCGGGAGCGCATTCGGTGATTGCAGGGTCTTTGAATCAGAATGTTGCACTGAAGGAACTTGATGATTTGCTGAACAATACCGAAGAAGATCCAATGGTGTATTGCTGTTATGATGGTAAGATGAACTCTTTTGACATTGATCAATACTCAGAATGGCTAAATGCATGACTACAACTTGAAATGGGATGAAAATACATACATACATACACACATTCTAAGTTTTGAACCAAACACTGATCTGCAACATTAGAATTGGAGGCTATCATCATGGCTTTGAAACTTGTCTTTGCCACCAATGTTGAGCGTTTTAGCTTCTTAGTTCAAAAAAGTTATGAGGTTTTT

mRNA sequence

GCATGGTGAAAGGGAAAATATTTGTATAATCTAAAAAATTTATATTGAAAAAAAGAAAAAATCAGCTAACCTTTGTTCTTCCCAGTTACGACCACTGAAGAAGCAGATGCAGCTTTAACGATGATTATAGAGGAGAAACATGAGCCGTTCAACCTTGTAATGGCAAATGCCACTGAATCGAATATGAATGCGCTCTCGATTCTGAATCAAACTGGCATTCCGATCATCTTGATGTCGCCGGAGAGGGATATGAAGACGTCTGGTAGAGCTATAGCTGAATGGGGCTATCACTTCCTCGAAAAACCGATTTCAATGGAGGATATCGAGCTTGTTTGGCAAATCGTATACAGGAAAATCAGAAACCCTAGGGCGAGGAATTTGGGAGAAAATACGAATCAAGCGAAGAAATCTCACATTGGCGGAATGTTTGGAAGAGTTTCGAACGTTGCAGGAGGAGTAGAGTGGAATCCGATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAAAATGTGGAGACAGAGAAGCGAGATTGAAGCCTTCAGCGACTAAATTCAAATCTCAAGTGAAGCATTTAAACAAGATGACAGAAAGTGATGCATGCACTTCACTTGGCACAAACCAAGTTCAAGAGTTACCAACAAAGTGCAATAGCATGACAAACATATTAGGCCAACCAAGTTACAGCTCAAACATTACAGGCAACCAGCTGAGACAACTACAGGTCCCGAGCTGCTTGAATGCTCATAGACTGCCTTCTCAAGATGTTTTTAATTGTCATCTCAGGATGATGAACCAGCAAAACTCATGTTCATATAAAAGTACTTATGGAGGCTTTGAAGGGCCAAACCTCGTTGACGACAACAACCGTATCTTCACCGACGAGCTTTACAAGAACGAAAGTTTATCTCATTCCAACTTCCAATACTTTGGTGGGGATCATGAAGATTGTCCCTTCCTTTCAGCTGATAATCACTACCCACATGCAGTTCAAGAGTTGGAATTTGCTCAGAACATGGCGGGCTGTTATGATGTTGACAATATCAGGTCGGGAGCGCATTCGGTGATTGCAGGGTCTTTGAATCAGAATGTTGCACTGAAGGAACTTGATGATTTGCTGAACAATACCGAAGAAGATCCAATGGTGTATTGCTGTTATGATGGTAAGATGAACTCTTTTGACATTGATCAATACTCAGAATGGCTAAATGCATGACTACAACTTGAAATGGGATGAAAATACATACATACATACACACATTCTAAGTTTTGAACCAAACACTGATCTGCAACATTAGAATTGGAGGCTATCATCATGGCTTTGAAACTTGTCTTTGCCACCAATGTTGAGCGTTTTAGCTTCTTAGTTCAAAAAAGTTATGAGGTTTTT

Coding sequence (CDS)

ATGATTATAGAGGAGAAACATGAGCCGTTCAACCTTGTAATGGCAAATGCCACTGAATCGAATATGAATGCGCTCTCGATTCTGAATCAAACTGGCATTCCGATCATCTTGATGTCGCCGGAGAGGGATATGAAGACGTCTGGTAGAGCTATAGCTGAATGGGGCTATCACTTCCTCGAAAAACCGATTTCAATGGAGGATATCGAGCTTGTTTGGCAAATCGTATACAGGAAAATCAGAAACCCTAGGGCGAGGAATTTGGGAGAAAATACGAATCAAGCGAAGAAATCTCACATTGGCGGAATGTTTGGAAGAGTTTCGAACGTTGCAGGAGGAGTAGAGTGGAATCCGATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAAAATGTGGAGACAGAGAAGCGAGATTGAAGCCTTCAGCGACTAAATTCAAATCTCAAGTGAAGCATTTAAACAAGATGACAGAAAGTGATGCATGCACTTCACTTGGCACAAACCAAGTTCAAGAGTTACCAACAAAGTGCAATAGCATGACAAACATATTAGGCCAACCAAGTTACAGCTCAAACATTACAGGCAACCAGCTGAGACAACTACAGGTCCCGAGCTGCTTGAATGCTCATAGACTGCCTTCTCAAGATGTTTTTAATTGTCATCTCAGGATGATGAACCAGCAAAACTCATGTTCATATAAAAGTACTTATGGAGGCTTTGAAGGGCCAAACCTCGTTGACGACAACAACCGTATCTTCACCGACGAGCTTTACAAGAACGAAAGTTTATCTCATTCCAACTTCCAATACTTTGGTGGGGATCATGAAGATTGTCCCTTCCTTTCAGCTGATAATCACTACCCACATGCAGTTCAAGAGTTGGAATTTGCTCAGAACATGGCGGGCTGTTATGATGTTGACAATATCAGGTCGGGAGCGCATTCGGTGATTGCAGGGTCTTTGAATCAGAATGTTGCACTGAAGGAACTTGATGATTTGCTGAACAATACCGAAGAAGATCCAATGGTGTATTGCTGTTATGATGGTAAGATGAACTCTTTTGACATTGATCAATACTCAGAATGGCTAAATGCATGA

Protein sequence

MIIEEKHEPFNLVMANATESNMNALSILNQTGIPIILMSPERDMKTSGRAIAEWGYHFLEKPISMEDIELVWQIVYRKIRNPRARNLGENTNQAKKSHIGGMFGRVSNVAGGVEWNPIEEEEEEEEEEKEKCGDREARLKPSATKFKSQVKHLNKMTESDACTSLGTNQVQELPTKCNSMTNILGQPSYSSNITGNQLRQLQVPSCLNAHRLPSQDVFNCHLRMMNQQNSCSYKSTYGGFEGPNLVDDNNRIFTDELYKNESLSHSNFQYFGGDHEDCPFLSADNHYPHAVQELEFAQNMAGCYDVDNIRSGAHSVIAGSLNQNVALKELDDLLNNTEEDPMVYCCYDGKMNSFDIDQYSEWLNA

Homology

[Close]

BLAST of Cp4.1LG01g13910 vs. TrEMBL
Match: A0A0A0KR71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G610490 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 147/263 (55.89%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 145 KFKSQVKHLNKMTESDA--CTSLGTNQVQELPTKCNSMTNILGQPSYSSNITGNQLRQLQ 204
           KFKSQVKHLNK+T +D+   TS   NQ  +LP K N  TNIL Q +  S IT + LR LQ
Sbjct: 174 KFKSQVKHLNKITANDSPSSTSFVKNQPPQLPPKRN--TNILTQQN--SYITDHNLRHLQ 233

Query: 205 VP--SCLN----AHRLP-SQDVFNCHLRMMNQQNSC-SYKST-----------YGGF-EG 264
           VP  SCLN       LP SQDVF+ HL MMNQ NS  SY++T           YGG  EG
Sbjct: 234 VPAASCLNNNPPTQLLPNSQDVFSPHLIMMNQNNSSNSYRTTHPTTNDLQLKTYGGLSEG 293

Query: 265 PNL-VDDNNRIFTDELYKNESL-----------SHSNFQYFGGDHED-CPFLSADNHYPH 324
            N  + + N +FTDELY  ES            S SNFQ+F  D +  C F   D     
Sbjct: 294 MNFNLVEGNHVFTDELYTFESTLEGFVQTSHYSSSSNFQHFPADEDYYCSFFQDDG---- 353

Query: 325 AVQELEFAQNMAG-CYDVDN----IRSGAHS-VIAG-SLNQNVALKELDDLLNNTEEDPM 366
              +LEFAQN+AG C DVDN      SGAHS VIAG S+NQNVALKELDDLLNNTEEDPM
Sbjct: 354 ---QLEFAQNLAGSCLDVDNNIITSMSGAHSAVIAGRSMNQNVALKELDDLLNNTEEDPM 413

[Close]

BLAST of Cp4.1LG01g13910 vs. TrEMBL
Match: M5XWH8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023099mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1


Query: 2   IIEEKHEPFNLVMANATESNMNALS---ILNQTGIPIILMSPERDMKTSGRAIAEWGYHF 61
           +I E+ + + LVMAN    +M++LS   +L++  IP+I MS E ++  + +A+AE    F
Sbjct: 57  MITEQKDDYKLVMANINMPDMDSLSFLRVLHKKEIPVIFMSSEMNVNVAKKALAEGACFF 116

Query: 62  LEKPISMEDIELVWQIVYRKIRNP----RARNLGENTNQAKKSHIGGMFGRVSNVAGGVE 119
           LEKPIS+ED++ VWQ VYRKIR P       N G   N  K        G   N AG V 
Sbjct: 117 LEKPISLEDLKSVWQHVYRKIRTPMKYKHKPNYGTKMNSGKDCQ-----GMKINEAGDVL 175

[Close]

BLAST of Cp4.1LG01g13910 vs. TrEMBL
Match: A0A061E4X0_THECC (Pseudo-response regulator 6-like protein OS=Theobroma cacao GN=TCM_009387 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-07
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 1


Query: 2   IIEEKHEPFNLVMANATESNMNALSILN---QTGIPIILMSPERDMKTSGRAIAEWGYHF 61
           +I++ +  F LVMAN    + N+LS L    +  IP+I+MS ER    + +AIA      
Sbjct: 54  MIQQGNNSFKLVMANINMKDKNSLSFLRALLKKDIPVIVMSSERSANVAQKAIAYGASLH 113

Query: 62  LEKPISMEDIELVWQIVYRKIRNPRARNLGENTNQAKKS 98
           L+KPIS+ D++ +WQ  YR ++N +A  + E   Q+K S
Sbjct: 114 LQKPISVNDLKYLWQHAYRNVKN-QAIKIKEVATQSKPS 151

[Close]

BLAST of Cp4.1LG01g13910 vs. NCBI nr
Match: gi|659092328|ref|XP_008447014.1| (PREDICTED: two-component response regulator ARR14-like [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 4.3e-51
Identity = 150/262 (57.25%), Postives = 170/262 (64.89%), Query Frame = 1


Query: 145 KFKSQVKHLNKMTESDA--CTSLGTNQVQELPTKCNSMTNILGQPSYSSNITGNQLRQLQ 204
           KFKSQVKHLNK+T +D+   TS   NQ+Q+LP K N  TNIL Q    S IT + LR  Q
Sbjct: 170 KFKSQVKHLNKITANDSSPSTSFVKNQLQQLPPKRN--TNILTQ--QISYITDHNLRHSQ 229

Query: 205 VP--SCLN--AHRLP-SQDVFNCHLRMMNQQNSC-SYKS-------------TYGG-FEG 264
           VP  SCLN    +LP SQDVF+ HL MMNQ NS  SY++             TYGG FE 
Sbjct: 230 VPAASCLNNPPTQLPNSQDVFSPHLIMMNQNNSSNSYRTTQYRTTNNDLQLKTYGGLFEE 289

Query: 265 PNL-VDDNNRIFTDELYKNES----------LSHSNFQYFGGDHE-DCPFLSADNHYPHA 324
            NL + + N +FTDELY NES           S SNFQ+F  D +  C F   D+     
Sbjct: 290 MNLNLVEGNHVFTDELYTNESTLEGFIQTSHYSSSNFQHFPADEDYYCSFFQDDH----- 349

Query: 325 VQELEFAQNMAG-CYDVDN----IRSGAHS-VIAG-SLNQNVALKELDDLLNNTEEDPMV 366
             +LEFAQN+AG C DVDN      SGAHS VIAG S+NQNVALKELDDLLNNTEEDPMV
Sbjct: 350 -GQLEFAQNLAGSCLDVDNNIITSMSGAHSAVIAGRSMNQNVALKELDDLLNNTEEDPMV 409

[Close]

BLAST of Cp4.1LG01g13910 vs. NCBI nr
Match: gi|778706083|ref|XP_011655794.1| (PREDICTED: two-component response regulator ARR2-like [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 147/263 (55.89%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 145 KFKSQVKHLNKMTESDA--CTSLGTNQVQELPTKCNSMTNILGQPSYSSNITGNQLRQLQ 204
           KFKSQVKHLNK+T +D+   TS   NQ  +LP K N  TNIL Q +  S IT + LR LQ
Sbjct: 211 KFKSQVKHLNKITANDSPSSTSFVKNQPPQLPPKRN--TNILTQQN--SYITDHNLRHLQ 270

Query: 205 VP--SCLN----AHRLP-SQDVFNCHLRMMNQQNSC-SYKST-----------YGGF-EG 264
           VP  SCLN       LP SQDVF+ HL MMNQ NS  SY++T           YGG  EG
Sbjct: 271 VPAASCLNNNPPTQLLPNSQDVFSPHLIMMNQNNSSNSYRTTHPTTNDLQLKTYGGLSEG 330

Query: 265 PNL-VDDNNRIFTDELYKNESL-----------SHSNFQYFGGDHED-CPFLSADNHYPH 324
            N  + + N +FTDELY  ES            S SNFQ+F  D +  C F   D     
Sbjct: 331 MNFNLVEGNHVFTDELYTFESTLEGFVQTSHYSSSSNFQHFPADEDYYCSFFQDDG---- 390

Query: 325 AVQELEFAQNMAG-CYDVDN----IRSGAHS-VIAG-SLNQNVALKELDDLLNNTEEDPM 366
              +LEFAQN+AG C DVDN      SGAHS VIAG S+NQNVALKELDDLLNNTEEDPM
Sbjct: 391 ---QLEFAQNLAGSCLDVDNNIITSMSGAHSAVIAGRSMNQNVALKELDDLLNNTEEDPM 450

[Close]

BLAST of Cp4.1LG01g13910 vs. NCBI nr
Match: gi|700196938|gb|KGN52115.1| (hypothetical protein Csa_5G610490 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49
Identity = 147/263 (55.89%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 145 KFKSQVKHLNKMTESDA--CTSLGTNQVQELPTKCNSMTNILGQPSYSSNITGNQLRQLQ 204
           KFKSQVKHLNK+T +D+   TS   NQ  +LP K N  TNIL Q +  S IT + LR LQ
Sbjct: 174 KFKSQVKHLNKITANDSPSSTSFVKNQPPQLPPKRN--TNILTQQN--SYITDHNLRHLQ 233

Query: 205 VP--SCLN----AHRLP-SQDVFNCHLRMMNQQNSC-SYKST-----------YGGF-EG 264
           VP  SCLN       LP SQDVF+ HL MMNQ NS  SY++T           YGG  EG
Sbjct: 234 VPAASCLNNNPPTQLLPNSQDVFSPHLIMMNQNNSSNSYRTTHPTTNDLQLKTYGGLSEG 293

Query: 265 PNL-VDDNNRIFTDELYKNESL-----------SHSNFQYFGGDHED-CPFLSADNHYPH 324
            N  + + N +FTDELY  ES            S SNFQ+F  D +  C F   D     
Sbjct: 294 MNFNLVEGNHVFTDELYTFESTLEGFVQTSHYSSSSNFQHFPADEDYYCSFFQDDG---- 353

Query: 325 AVQELEFAQNMAG-CYDVDN----IRSGAHS-VIAG-SLNQNVALKELDDLLNNTEEDPM 366
              +LEFAQN+AG C DVDN      SGAHS VIAG S+NQNVALKELDDLLNNTEEDPM
Sbjct: 354 ---QLEFAQNLAGSCLDVDNNIITSMSGAHSAVIAGRSMNQNVALKELDDLLNNTEEDPM 413

[Close]

BLAST of Cp4.1LG01g13910 vs. NCBI nr
Match: gi|645276731|ref|XP_008243428.1| (PREDICTED: two-component response regulator ARR14 [Prunus mume])

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-11
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1


Query: 1  MIIEEKHEPFNLVMANATESNMNALS---ILNQTGIPIILMSPERDMKTSGRAIAEWGYH 60
          MI+E+K + + LVMAN    +M++LS   +L++  IP+I MS E ++  + +A+AE    
Sbjct: 8  MIMEQKDD-YKLVMANINMPDMDSLSFLRVLHKKEIPVIFMSSEMNVNVAKKALAEGACF 67

Query: 61 FLEKPISMEDIELVWQIVYRKIRNPR 84
          FLEKPIS+ED++ +WQ VYRKIR PR
Sbjct: 68 FLEKPISLEDLKSMWQHVYRKIRTPR 92

[Close]

BLAST of Cp4.1LG01g13910 vs. NCBI nr
Match: gi|596258226|ref|XP_007224849.1| (hypothetical protein PRUPE_ppa023099mg [Prunus persica])

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-11
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1


Query: 2   IIEEKHEPFNLVMANATESNMNALS---ILNQTGIPIILMSPERDMKTSGRAIAEWGYHF 61
           +I E+ + + LVMAN    +M++LS   +L++  IP+I MS E ++  + +A+AE    F
Sbjct: 57  MITEQKDDYKLVMANINMPDMDSLSFLRVLHKKEIPVIFMSSEMNVNVAKKALAEGACFF 116

Query: 62  LEKPISMEDIELVWQIVYRKIRNP----RARNLGENTNQAKKSHIGGMFGRVSNVAGGVE 119
           LEKPIS+ED++ VWQ VYRKIR P       N G   N  K        G   N AG V 
Sbjct: 117 LEKPISLEDLKSVWQHVYRKIRTPMKYKHKPNYGTKMNSGKDCQ-----GMKINEAGDVL 175

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g13910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR71_CUCSA	2.2e-49	55.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G610490 PE=4 SV=1	[more]
M5XWH8_PRUPE	2.3e-11	39.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023099mg PE=4 SV=1	[more]
A0A061E4X0_THECC	2.7e-07	37.37	Pseudo-response regulator 6-like protein OS=Theobroma cacao GN=TCM_009387 PE=4 S...	[more]

BLAST of Cp4.1LG01g13910 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g13910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092328\|ref\|XP_008447014.1\|	4.3e-51	57.25	PREDICTED: two-component response regulator ARR14-like [Cucumis melo]	[more]
gi\|778706083\|ref\|XP_011655794.1\|	3.1e-49	55.89	PREDICTED: two-component response regulator ARR2-like [Cucumis sativus]	[more]
gi\|700196938\|gb\|KGN52115.1\|	3.1e-49	55.89	hypothetical protein Csa_5G610490 [Cucumis sativus]	[more]
gi\|645276731\|ref\|XP_008243428.1\|	3.4e-11	47.67	PREDICTED: two-component response regulator ARR14 [Prunus mume]	[more]
gi\|596258226\|ref\|XP_007224849.1\|	3.4e-11	39.52	hypothetical protein PRUPE_ppa023099mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011006	CheY-like_superfamily

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13910.1	Cp4.1LG01g13910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 8..83 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 118..138 scor
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 31..83 score: 7.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g13910	Cucsa.283240	Cucumber (Gy14) v1	cgycpeB0750
Cp4.1LG01g13910	CmaCh04G014840	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g13910	CmoCh04G015550	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g13910	Cla020427	Watermelon (97103) v1	cpewmB427
Cp4.1LG01g13910	Csa5G610490	Cucumber (Chinese Long) v2	cpecuB439
Cp4.1LG01g13910	MELO3C012282	Melon (DHL92) v3.5.1	cpemeB363
Cp4.1LG01g13910	ClCG05G022410	Watermelon (Charleston Gray)	cpewcgB388
Cp4.1LG01g13910	CSPI05G25620	Wild cucumber (PI 183967)	cpecpiB439
Cp4.1LG01g13910	Lsi04G002170	Bottle gourd (USVL1VR-Ls)	cpelsiB352
Cp4.1LG01g13910	MELO3C012282.2	Melon (DHL92) v3.6.1	cpemedB423
Cp4.1LG01g13910	CsaV3_5G034680	Cucumber (Chinese Long) v3	cpecucB0543
Cp4.1LG01g13910	CsaV3_5G028750	Cucumber (Chinese Long) v3	cpecucB0539
Cp4.1LG01g13910	CsGy5G025060	Cucumber (Gy14) v2	cgybcpeB648
Cp4.1LG01g13910	Carg01860	Silver-seed gourd	carcpeB1177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g13910	Cucurbita maxima (Rimu)	cmacpeB323
Cp4.1LG01g13910	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g13910	Cucurbita maxima (Rimu)	cmacpeB737
Cp4.1LG01g13910	Cucurbita moschata (Rifu)	cmocpeB115
Cp4.1LG01g13910	Cucurbita moschata (Rifu)	cmocpeB285
Cp4.1LG01g13910	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g13910	Cucurbita moschata (Rifu)	cmocpeB691
Cp4.1LG01g13910	Wild cucumber (PI 183967)	cpecpiB381
Cp4.1LG01g13910	Cucumber (Chinese Long) v2	cpecuB381
Cp4.1LG01g13910	Bottle gourd (USVL1VR-Ls)	cpelsiB371
Cp4.1LG01g13910	Watermelon (Charleston Gray)	cpewcgB401
Cp4.1LG01g13910	Watermelon (97103) v1	cpewmB470
Cp4.1LG01g13910	Melon (DHL92) v3.5.1	cpemeB395
Cp4.1LG01g13910	Cucumber (Gy14) v2	cgybcpeB063
Cp4.1LG01g13910	Melon (DHL92) v3.6.1	cpemedB458
Cp4.1LG01g13910	Silver-seed gourd	carcpeB1466
Cp4.1LG01g13910	Cucumber (Chinese Long) v3	cpecucB0474
Cp4.1LG01g13910	Wax gourd	cpewgoB0557
Cp4.1LG01g13910	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG01g13910	Cucurbita pepo (Zucchini)	cpecpeB205
Cp4.1LG01g13910	Cucurbita pepo (Zucchini)	cpecpeB345
Cp4.1LG01g13910	Cucurbita pepo (Zucchini)	cpecpeB399