Cp4.1LG01g13750 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g13750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAP2/B3 transcription factor family protein
LocationCp4.1LG01 : 8119732 .. 8121180 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGAGTATCAGTATGAGAGTATCAGAATCAGATAAGATACATCCCACATGGGGAAATATTTGAATTAAAAAAATATGTTATAAAAGATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATGTGAACCCCATCAACTTGTTCGCCCCCACTTCTCCCTTCCCCCTACAGTTGACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTCCACCCTATAAATCCACCCTTCCCCCCAACGCCCCATTCCACTTCATTCCCATTCTCCCCTTTTACTTTTCTCTCCTTCAGTTTCCCATGGACGGGATTTGCATTGACCGAACCACTTCCACTGAATCCCAATCCACAAATTTCCCCCTCCTCAAATCTCCACCGCCGGAGACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

mRNA sequence

ATGAATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

Coding sequence (CDS)

ATGAATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

Protein sequence

MNGERIEGNFRGDELLKGKHGPGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRELEFLAFQCTKKQRIVGAL
BLAST of Cp4.1LG01g13750 vs. Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-108
Identity = 214/321 (66.67%), Postives = 245/321 (76.32%), Query Frame = 1

Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           +L R+GSG +SVVLDS++ GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 32  NLYRMGSG-SSVVLDSEN-GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 91

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHEL 146
           NEE+EAARAYDVA  RFR RDAVTNFKD   D+D   FLNSHSK+EIVDMLRKHTY  EL
Sbjct: 92  NEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 151

Query: 147 HQSKRNAGLSGLDRKHNRSLSGLDSE--------ARELLFEKAVTPSDVGKLNRLVIPKQ 206
            QSKR    +G +       SGL ++        + E LFEKAVTPSDVGKLNRLVIPK 
Sbjct: 152 EQSKRRRNGNG-NMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKH 211

Query: 207 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 266
           HAEK+FPL + S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+
Sbjct: 212 HAEKHFPLPS-SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLR 271

Query: 267 PGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 326
            GD+VSF +S GQD+QLYI WKSR  S     +++   ++RLFGV+I   SS N   G K
Sbjct: 272 AGDVVSFSRSNGQDQQLYIGWKSRSGS-----DLDAGRVLRLFGVNISPESSRNDVVGNK 331

Query: 327 R-RELEFLAFQCTKKQRIVGA 339
           R  + E L+  C+KKQRI  A
Sbjct: 332 RVNDTEMLSLVCSKKQRIFHA 343

BLAST of Cp4.1LG01g13750 vs. Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.5e-106
Identity = 208/331 (62.84%), Postives = 249/331 (75.23%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLD ++ G+E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 29  PAAALRLYRMGSGGSSVVLDPEN-GLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 88

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNE+EEAAR+YD+AA RFRGRDAV NFK+   D D+ AFL +HSKAEIVDMLRKHT
Sbjct: 89  WLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGDL-AFLEAHSKAEIVDMLRKHT 148

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDS-----EARELLFEKAVTPSDVGKLNRLVIP 201
           Y  EL Q+ +      +D    R+ S         + RE+LFEKAVTPSDVGKLNRLVIP
Sbjct: 149 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 208

Query: 202 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 261
           KQHAEK+FPL + S A +KG+L+NFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 209 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 268

Query: 262 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVH-IVRLFGVDI-----VKASS 321
           L+ GD+V+F +S G ++QLYI+WK R     + P  NPV  +VRLFGVDI     VK + 
Sbjct: 269 LRAGDVVTFERSTGLERQLYIDWKVR-----SGPRENPVQVVVRLFGVDIFNVTTVKPND 328

Query: 322 PNTGCGEKR-REL-EFLAFQCTKKQRIVGAL 340
               CG KR R++ +  A +C+KKQ I+ AL
Sbjct: 329 VVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

BLAST of Cp4.1LG01g13750 vs. Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-103
Identity = 210/339 (61.95%), Postives = 248/339 (73.16%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLDS++ GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 36  PATSMRLYRMGSGGSSVVLDSEN-GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 95

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDE-DNDDDVSAFLNSHSKAEIVDMLRKH 141
           WLGTFNEEEEAA +YD+A +RFRGRDAVTNFK + D +D  SAFL++HSKAEIVDMLRKH
Sbjct: 96  WLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDAESAFLDAHSKAEIVDMLRKH 155

Query: 142 TYLHELHQSKR-----NAGLSGLDRKHNRSLSGLDS--EARELLFEKAVTPSDVGKLNRL 201
           TY  E  QS+R     +   SGL+     +  G D+   ARE+LFEK VTPSDVGKLNRL
Sbjct: 156 TYADEFEQSRRKFVNGDGKRSGLE----TATYGNDAVLRAREVLFEKTVTPSDVGKLNRL 215

Query: 202 VIPKQHAEKNFPLQTGSTA------SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKG 261
           VIPKQHAEK+FPL   +TA       +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKG
Sbjct: 216 VIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKG 275

Query: 262 WSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVK 321
           WSRFVKEKNL+ GD+V F +S G D+QLYI WK R +   T        +VRLFGV+I  
Sbjct: 276 WSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT--------VVRLFGVNIFN 335

Query: 322 ASS--PN---TGC-GEKR-RELEFLAFQCTKKQRIVGAL 340
            S+  PN     C G+KR RE +  +  C+KKQ I+  L
Sbjct: 336 VSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

BLAST of Cp4.1LG01g13750 vs. Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.4e-96
Identity = 198/316 (62.66%), Postives = 232/316 (73.42%), Query Frame = 1

Query: 28  LCRVGSGFTSVVLDSDS---CGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 87
           L R+GSG TSVVLDS++     VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG
Sbjct: 29  LYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 88

Query: 88  TFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLH 147
           TFNEE+EAARAYDVAA RFRGRDAVTNFKD   +++V  FLN+HSK+EIVDMLRKHTY  
Sbjct: 89  TFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE-FLNAHSKSEIVDMLRKHTYKE 148

Query: 148 ELHQSKRNAGLSGLDRKHNRSLSGL---DSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 207
           EL Q KRN   +G +       S +     +  ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 149 ELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 208

Query: 208 KNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPG 267
           K+FPL  G +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L  G
Sbjct: 209 KHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAG 268

Query: 268 DIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRR 327
           D++SF +S  QD++ +I WKS+        ++    ++RLFGVDI   S       ++  
Sbjct: 269 DLISFKRSNDQDQKFFIGWKSKSGL-----DLETGRVMRLFGVDI---SLNAVVVVKETT 328

Query: 328 ELEFLAFQCTKKQRIV 337
           E+   + +C KKQR++
Sbjct: 329 EVLMSSLRC-KKQRVL 333

BLAST of Cp4.1LG01g13750 vs. Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.8e-89
Identity = 192/329 (58.36%), Postives = 221/329 (67.17%), Query Frame = 1

Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESR---------KLPSSRFKGVVPQPNGRWGAQIYEK 86
           +L RVGSG  S V+D+   G EA+S          KLPSS++KGVVPQPNGRWGAQIYE+
Sbjct: 29  ALQRVGSG-ASAVMDAAEPGAEADSGGERRGGGGGKLPSSKYKGVVPQPNGRWGAQIYER 88

Query: 87  HQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSA----FLNSHSKAEI 146
           HQRVWLGTF  E EAARAYDVAAQRFRGRDAVTNF+     D  +A    FL S SKAE+
Sbjct: 89  HQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDPEAAVELRFLASRSKAEV 148

Query: 147 VDMLRKHTYLHELHQSKRN-AGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNR 206
           VDMLRKHTYL EL Q+KR  A +S    KH  S     S ARE LF+K VTPSDVGKLNR
Sbjct: 149 VDMLRKHTYLEELTQNKRAFAAISPPPPKHPASSPTSSSAAREHLFDKTVTPSDVGKLNR 208

Query: 207 LVIPKQHAEKNFPLQ------TGSTASS----------KGLLLNFEDGGGKVWRFRYSYW 266
           LVIPKQHAEK+FPLQ      T S A++          KG+LLNFED  GKVW+FRYSYW
Sbjct: 209 LVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYW 268

Query: 267 NSSQSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNI---- 312
           NSSQSYVLTKGWSRFVKEK L  GD V F ++ G++ QL+I+ K R A PTT        
Sbjct: 269 NSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVR-AKPTTAAAAAAFL 328

BLAST of Cp4.1LG01g13750 vs. TrEMBL
Match: A0A0A0KR17_CUCSA (DNA-binding protein RAV1 OS=Cucumis sativus GN=Csa_5G608380 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 3.4e-150
Identity = 280/329 (85.11%), Postives = 288/329 (87.54%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P   TSLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDTSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D +   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKQNRFLSGSDDDPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RK S TT   INPV   RLFGVDI+K  SP
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKPSTTTGSAINPVQTFRLFGVDIIKV-SP 316

Query: 322 NTGCGEK-RRELEFLAFQCTKKQRIVGAL 340
           N+GC EK RRELEFL  QCTKKQR+VGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

BLAST of Cp4.1LG01g13750 vs. TrEMBL
Match: A0A068TYZ8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032561001 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120
Identity = 235/340 (69.12%), Postives = 265/340 (77.94%), Query Frame = 1

Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           SLCRVGSG +S+++D++  GVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 42  SLCRVGSGASSMIIDAE-VGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 101

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFK--DEDNDDDV-SAFLNSHSKAEIVDMLRKHTYL 146
           NEEEEAARAYD+AAQRFRGRDAVTNFK  +E  +DDV +AFL+ HSKAEIVDMLRKHTY 
Sbjct: 102 NEEEEAARAYDIAAQRFRGRDAVTNFKPLNEAEEDDVEAAFLSCHSKAEIVDMLRKHTYN 161

Query: 147 HELHQSKRNAGLSGLDRKHNRSLSGLDS-------EARELLFEKAVTPSDVGKLNRLVIP 206
            EL QSKRN GL G  +K  + ++GL S       +ARE LFEKAVTPSDVGKLNRLVIP
Sbjct: 162 DELEQSKRNYGLDGNGKKGCKGIAGLHSFGYQKTTKAREQLFEKAVTPSDVGKLNRLVIP 221

Query: 207 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 266
           KQHAEK+FPLQ+G+T  SKG+LLNFED GGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 222 KQHAEKHFPLQSGNT--SKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 281

Query: 267 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDP--------NINPVHIVRLFGVDIVKA 326
           LK GDIVSF +S G DKQLYI+WK R  +    P         I PV +VRLFGV+I K 
Sbjct: 282 LKAGDIVSFQRSTGADKQLYIDWKRRNGAAEAAPPVAAGISIPIQPVQMVRLFGVNIFKV 341

Query: 327 SSP--------NTGCGEKR-RELEFLAFQCTKKQRIVGAL 340
             P        N+ C  KR R +E L  +C+KK R +GAL
Sbjct: 342 PLPVNGVVMDSNSSCSGKRVRGMELLGLECSKKPRAIGAL 378

BLAST of Cp4.1LG01g13750 vs. TrEMBL
Match: H9MHJ7_CASSA (RAV1 OS=Castanea sativa PE=2 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 4.1e-119
Identity = 237/350 (67.71%), Postives = 265/350 (75.71%), Query Frame = 1

Query: 24  SHTSLCRVGSGFTS-VVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVW 83
           S  SLCRVGSG TS ++LDS+S G+EAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVW
Sbjct: 35  SPESLCRVGSGTTSTLILDSES-GIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVW 94

Query: 84  LGTFNEEEEAARAYDVAAQRFRGRDAVTNFK------------DEDNDDDVSAFLNSHSK 143
           LGTFNEE+EAA+AYD+AAQRFRGRDAVTNFK                DD  + FLNSHSK
Sbjct: 95  LGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPCGTTDHHHHHHHHQEDDIETVFLNSHSK 154

Query: 144 AEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLS-GL-------DSEARELLFEKAV 203
           AEIVDMLRKHTY  EL QSKRN GL    R    SL  GL         +ARE LFEKAV
Sbjct: 155 AEIVDMLRKHTYNDELEQSKRNYGLDSTRRSKGESLGHGLLERVNYYSMKAREQLFEKAV 214

Query: 204 TPSDVGKLNRLVIPKQHAEKNFPLQ---TGSTASSKGLLLNFEDGGGKVWRFRYSYWNSS 263
           TPSDVGKLNRLVIPKQHAEK+FPLQ   + ST SSKGLLLNFED GGKVWRFRYSYWNSS
Sbjct: 215 TPSDVGKLNRLVIPKQHAEKHFPLQNSGSNSTTSSKGLLLNFEDVGGKVWRFRYSYWNSS 274

Query: 264 QSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVR 323
           QSYVLTKGWSRFVKEKNLK GDIVSF +S G D QL+IEWK+R    ++  + NPV +VR
Sbjct: 275 QSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGPDNQLFIEWKARAGPSSSSSSSNPVQMVR 334

Query: 324 LFGVDIVK--------ASSPNTGC--GEKRRELEFLAFQCTKKQRIVGAL 340
           LFGV+I+K         S    GC  G++ RE++ LA +C+KKQRIVGAL
Sbjct: 335 LFGVNILKIPGVGGVVESGNIGGCNGGKRMREMDLLALECSKKQRIVGAL 383

BLAST of Cp4.1LG01g13750 vs. TrEMBL
Match: F6HFQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03070 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-118
Identity = 235/335 (70.15%), Postives = 270/335 (80.60%), Query Frame = 1

Query: 24  SHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL 83
           S  SLCRVGSG TSV+LDS+S  +EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL
Sbjct: 50  SPESLCRVGSG-TSVILDSES-SIEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL 109

Query: 84  GTFNEEEEAARAYDVAAQRFRGRDAVTNFK--DEDNDDDV-SAFLNSHSKAEIVDMLRKH 143
           GTFNEEEEAA+AYD+AAQRFRGRDAVTNFK   E  +DD+ +AFLNSHSKAEIVDMLRKH
Sbjct: 110 GTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEEDDIEAAFLNSHSKAEIVDMLRKH 169

Query: 144 TYLHELHQSKRNAGLSGLDRKHNRSLS-----GLD--SEARELLFEKAVTPSDVGKLNRL 203
           TY  EL QSKRN GL   + K +R+       G D  +++RE LFEK VTPSDVGKLNRL
Sbjct: 170 TYNDELEQSKRNYGLDA-NGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRL 229

Query: 204 VIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVK 263
           VIPKQHAEK+FPLQTG+T  SKG+LLNFED GGKVWRFRYSYWNSSQSYVLTKGWSRFVK
Sbjct: 230 VIPKQHAEKHFPLQTGTT--SKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVK 289

Query: 264 EKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPN-INPVHIVRLFGVDIVK----- 323
           EKNLK GDIVSF +S G DKQLYI+WK+R   PT   N + PV +VRLFGV+I K     
Sbjct: 290 EKNLKAGDIVSFQRSTGGDKQLYIDWKARN-GPTNQINPVEPVEMVRLFGVNIFKVPVNS 349

Query: 324 ---ASSPNTGCGEKRRELEFLAFQCTKKQRIVGAL 340
               ++  +  G++  E+E L+F+C+KKQR++GA+
Sbjct: 350 SVVVANNGSWTGKRMIEMELLSFECSKKQRVIGAV 378

BLAST of Cp4.1LG01g13750 vs. TrEMBL
Match: B9SEJ0_RICCO (DNA-binding protein RAV1, putative OS=Ricinus communis GN=RCOM_0705620 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 2.3e-117
Identity = 235/336 (69.94%), Postives = 269/336 (80.06%), Query Frame = 1

Query: 28  LCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFN 87
           LCRVGSG TSVVLDS+S G+EAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN
Sbjct: 39  LCRVGSG-TSVVLDSES-GIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFN 98

Query: 88  EEEEAARAYDVAAQRFRGRDAVTNFKDE------DNDDDVSAFLNSHSKAEIVDMLRKHT 147
           EE+EAA+AYD+AAQRFRGRDA+TNFK +      + D+  +AFLNSHSKAEIVDMLRKHT
Sbjct: 99  EEDEAAKAYDIAAQRFRGRDAITNFKPQATDHQSEEDEIETAFLNSHSKAEIVDMLRKHT 158

Query: 148 YLHELHQSKRN--AGLSGLDRKHNRS------LSGLD---SEARELLFEKAVTPSDVGKL 207
           Y  EL QSKRN  +     D+  NR+      LSG +    +ARE LFEKAVTPSDVGKL
Sbjct: 159 YNDELEQSKRNYTSNNGRGDKFQNRTNMNNVGLSGSERIIMKAREQLFEKAVTPSDVGKL 218

Query: 208 NRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSR 267
           NRLVIPKQHAEK+FPLQ+GS  S+KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSR
Sbjct: 219 NRLVIPKQHAEKHFPLQSGSN-STKGVLLNFEDITGKVWRFRYSYWNSSQSYVLTKGWSR 278

Query: 268 FVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPT-TDP---NINPVHIVRLFGVDIV 327
           FVKEKNLK GDIV FLKS G DKQLYI+WK R  +PT ++P   ++ PV +VRLFGV+I 
Sbjct: 279 FVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRTLTPTVSNPVVCSVQPVQMVRLFGVNIF 338

Query: 328 K--ASSPNTGCGEKR-RELEFLAFQCTKKQRIVGAL 340
           K   +S   GC  KR RE+E L+  C KKQR++GAL
Sbjct: 339 KVPGNSHIEGCNGKRIREMELLSLDCIKKQRVIGAL 371

BLAST of Cp4.1LG01g13750 vs. TAIR10
Match: AT1G13260.1 (AT1G13260.1 related to ABI3/VP1 1)

HSP 1 Score: 394.4 bits (1012), Expect = 6.9e-110
Identity = 214/321 (66.67%), Postives = 245/321 (76.32%), Query Frame = 1

Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           +L R+GSG +SVVLDS++ GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 32  NLYRMGSG-SSVVLDSEN-GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 91

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHEL 146
           NEE+EAARAYDVA  RFR RDAVTNFKD   D+D   FLNSHSK+EIVDMLRKHTY  EL
Sbjct: 92  NEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 151

Query: 147 HQSKRNAGLSGLDRKHNRSLSGLDSE--------ARELLFEKAVTPSDVGKLNRLVIPKQ 206
            QSKR    +G +       SGL ++        + E LFEKAVTPSDVGKLNRLVIPK 
Sbjct: 152 EQSKRRRNGNG-NMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKH 211

Query: 207 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 266
           HAEK+FPL + S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+
Sbjct: 212 HAEKHFPLPS-SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLR 271

Query: 267 PGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 326
            GD+VSF +S GQD+QLYI WKSR  S     +++   ++RLFGV+I   SS N   G K
Sbjct: 272 AGDVVSFSRSNGQDQQLYIGWKSRSGS-----DLDAGRVLRLFGVNISPESSRNDVVGNK 331

Query: 327 R-RELEFLAFQCTKKQRIVGA 339
           R  + E L+  C+KKQRI  A
Sbjct: 332 RVNDTEMLSLVCSKKQRIFHA 343

BLAST of Cp4.1LG01g13750 vs. TAIR10
Match: AT1G68840.1 (AT1G68840.1 related to ABI3/VP1 2)

HSP 1 Score: 387.5 bits (994), Expect = 8.5e-108
Identity = 208/331 (62.84%), Postives = 249/331 (75.23%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLD ++ G+E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 29  PAAALRLYRMGSGGSSVVLDPEN-GLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 88

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNE+EEAAR+YD+AA RFRGRDAV NFK+   D D+ AFL +HSKAEIVDMLRKHT
Sbjct: 89  WLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGDL-AFLEAHSKAEIVDMLRKHT 148

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDS-----EARELLFEKAVTPSDVGKLNRLVIP 201
           Y  EL Q+ +      +D    R+ S         + RE+LFEKAVTPSDVGKLNRLVIP
Sbjct: 149 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 208

Query: 202 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 261
           KQHAEK+FPL + S A +KG+L+NFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 209 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 268

Query: 262 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVH-IVRLFGVDI-----VKASS 321
           L+ GD+V+F +S G ++QLYI+WK R     + P  NPV  +VRLFGVDI     VK + 
Sbjct: 269 LRAGDVVTFERSTGLERQLYIDWKVR-----SGPRENPVQVVVRLFGVDIFNVTTVKPND 328

Query: 322 PNTGCGEKR-REL-EFLAFQCTKKQRIVGAL 340
               CG KR R++ +  A +C+KKQ I+ AL
Sbjct: 329 VVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

BLAST of Cp4.1LG01g13750 vs. TAIR10
Match: AT1G25560.1 (AT1G25560.1 AP2/B3 transcription factor family protein)

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-104
Identity = 210/339 (61.95%), Postives = 248/339 (73.16%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLDS++ GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 36  PATSMRLYRMGSGGSSVVLDSEN-GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 95

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDE-DNDDDVSAFLNSHSKAEIVDMLRKH 141
           WLGTFNEEEEAA +YD+A +RFRGRDAVTNFK + D +D  SAFL++HSKAEIVDMLRKH
Sbjct: 96  WLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDAESAFLDAHSKAEIVDMLRKH 155

Query: 142 TYLHELHQSKR-----NAGLSGLDRKHNRSLSGLDS--EARELLFEKAVTPSDVGKLNRL 201
           TY  E  QS+R     +   SGL+     +  G D+   ARE+LFEK VTPSDVGKLNRL
Sbjct: 156 TYADEFEQSRRKFVNGDGKRSGLE----TATYGNDAVLRAREVLFEKTVTPSDVGKLNRL 215

Query: 202 VIPKQHAEKNFPLQTGSTA------SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKG 261
           VIPKQHAEK+FPL   +TA       +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKG
Sbjct: 216 VIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKG 275

Query: 262 WSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVK 321
           WSRFVKEKNL+ GD+V F +S G D+QLYI WK R +   T        +VRLFGV+I  
Sbjct: 276 WSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT--------VVRLFGVNIFN 335

Query: 322 ASS--PN---TGC-GEKR-RELEFLAFQCTKKQRIVGAL 340
            S+  PN     C G+KR RE +  +  C+KKQ I+  L
Sbjct: 336 VSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

BLAST of Cp4.1LG01g13750 vs. TAIR10
Match: AT3G25730.1 (AT3G25730.1 ethylene response DNA binding factor 3)

HSP 1 Score: 354.4 bits (908), Expect = 7.9e-98
Identity = 198/316 (62.66%), Postives = 232/316 (73.42%), Query Frame = 1

Query: 28  LCRVGSGFTSVVLDSDS---CGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 87
           L R+GSG TSVVLDS++     VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG
Sbjct: 29  LYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 88

Query: 88  TFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLH 147
           TFNEE+EAARAYDVAA RFRGRDAVTNFKD   +++V  FLN+HSK+EIVDMLRKHTY  
Sbjct: 89  TFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE-FLNAHSKSEIVDMLRKHTYKE 148

Query: 148 ELHQSKRNAGLSGLDRKHNRSLSGL---DSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 207
           EL Q KRN   +G +       S +     +  ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 149 ELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 208

Query: 208 KNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPG 267
           K+FPL  G +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L  G
Sbjct: 209 KHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAG 268

Query: 268 DIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRR 327
           D++SF +S  QD++ +I WKS+        ++    ++RLFGVDI   S       ++  
Sbjct: 269 DLISFKRSNDQDQKFFIGWKSKSGL-----DLETGRVMRLFGVDI---SLNAVVVVKETT 328

Query: 328 ELEFLAFQCTKKQRIV 337
           E+   + +C KKQR++
Sbjct: 329 EVLMSSLRC-KKQRVL 333

BLAST of Cp4.1LG01g13750 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 161.4 bits (407), Expect = 9.9e-40
Identity = 78/117 (66.67%), Postives = 89/117 (76.07%), Query Frame = 1

Query: 171 SEARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTA-SSKGLLLNFEDGGGKVW 230
           S  RE +F+K VTPSDVGKLNRLVIPKQHAE+ FPL   +T  S+KGLLLNFED  G  W
Sbjct: 16  SMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSW 75

Query: 231 RFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASP 287
           RFRYSYWNSSQSYV+TKGWSRFVK+K L  GDIVSF +      +LYI+W+ R   P
Sbjct: 76  RFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPKIP 132

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: gi|659091453|ref|XP_008446558.1| (PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucumis melo])

HSP 1 Score: 542.3 bits (1396), Expect = 5.8e-151
Identity = 283/329 (86.02%), Postives = 289/329 (87.84%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P    SLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D E   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RKAS TT   INPV   RLFGVDI+KA SP
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINPVQTFRLFGVDIIKA-SP 316

Query: 322 NTGCGEK-RRELEFLAFQCTKKQRIVGAL 340
           N+GC EK RRELEFL  QCTKKQRIVGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: gi|449434658|ref|XP_004135113.1| (PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucumis sativus])

HSP 1 Score: 539.3 bits (1388), Expect = 4.9e-150
Identity = 280/329 (85.11%), Postives = 288/329 (87.54%), Query Frame = 1

Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P   TSLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDTSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D +   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKQNRFLSGSDDDPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RK S TT   INPV   RLFGVDI+K  SP
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKPSTTTGSAINPVQTFRLFGVDIIKV-SP 316

Query: 322 NTGCGEK-RRELEFLAFQCTKKQRIVGAL 340
           N+GC EK RRELEFL  QCTKKQR+VGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: gi|661896000|emb|CDP00578.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 439.1 bits (1128), Expect = 7.0e-120
Identity = 235/340 (69.12%), Postives = 265/340 (77.94%), Query Frame = 1

Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           SLCRVGSG +S+++D++  GVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 42  SLCRVGSGASSMIIDAE-VGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 101

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFK--DEDNDDDV-SAFLNSHSKAEIVDMLRKHTYL 146
           NEEEEAARAYD+AAQRFRGRDAVTNFK  +E  +DDV +AFL+ HSKAEIVDMLRKHTY 
Sbjct: 102 NEEEEAARAYDIAAQRFRGRDAVTNFKPLNEAEEDDVEAAFLSCHSKAEIVDMLRKHTYN 161

Query: 147 HELHQSKRNAGLSGLDRKHNRSLSGLDS-------EARELLFEKAVTPSDVGKLNRLVIP 206
            EL QSKRN GL G  +K  + ++GL S       +ARE LFEKAVTPSDVGKLNRLVIP
Sbjct: 162 DELEQSKRNYGLDGNGKKGCKGIAGLHSFGYQKTTKAREQLFEKAVTPSDVGKLNRLVIP 221

Query: 207 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 266
           KQHAEK+FPLQ+G+T  SKG+LLNFED GGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 222 KQHAEKHFPLQSGNT--SKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 281

Query: 267 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDP--------NINPVHIVRLFGVDIVKA 326
           LK GDIVSF +S G DKQLYI+WK R  +    P         I PV +VRLFGV+I K 
Sbjct: 282 LKAGDIVSFQRSTGADKQLYIDWKRRNGAAEAAPPVAAGISIPIQPVQMVRLFGVNIFKV 341

Query: 327 SSP--------NTGCGEKR-RELEFLAFQCTKKQRIVGAL 340
             P        N+ C  KR R +E L  +C+KK R +GAL
Sbjct: 342 PLPVNGVVMDSNSSCSGKRVRGMELLGLECSKKPRAIGAL 378

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: gi|374259661|gb|AEZ02303.1| (RAV1 [Castanea sativa])

HSP 1 Score: 436.0 bits (1120), Expect = 5.9e-119
Identity = 237/350 (67.71%), Postives = 265/350 (75.71%), Query Frame = 1

Query: 24  SHTSLCRVGSGFTS-VVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVW 83
           S  SLCRVGSG TS ++LDS+S G+EAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVW
Sbjct: 35  SPESLCRVGSGTTSTLILDSES-GIEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVW 94

Query: 84  LGTFNEEEEAARAYDVAAQRFRGRDAVTNFK------------DEDNDDDVSAFLNSHSK 143
           LGTFNEE+EAA+AYD+AAQRFRGRDAVTNFK                DD  + FLNSHSK
Sbjct: 95  LGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPCGTTDHHHHHHHHQEDDIETVFLNSHSK 154

Query: 144 AEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLS-GL-------DSEARELLFEKAV 203
           AEIVDMLRKHTY  EL QSKRN GL    R    SL  GL         +ARE LFEKAV
Sbjct: 155 AEIVDMLRKHTYNDELEQSKRNYGLDSTRRSKGESLGHGLLERVNYYSMKAREQLFEKAV 214

Query: 204 TPSDVGKLNRLVIPKQHAEKNFPLQ---TGSTASSKGLLLNFEDGGGKVWRFRYSYWNSS 263
           TPSDVGKLNRLVIPKQHAEK+FPLQ   + ST SSKGLLLNFED GGKVWRFRYSYWNSS
Sbjct: 215 TPSDVGKLNRLVIPKQHAEKHFPLQNSGSNSTTSSKGLLLNFEDVGGKVWRFRYSYWNSS 274

Query: 264 QSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVR 323
           QSYVLTKGWSRFVKEKNLK GDIVSF +S G D QL+IEWK+R    ++  + NPV +VR
Sbjct: 275 QSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGPDNQLFIEWKARAGPSSSSSSSNPVQMVR 334

Query: 324 LFGVDIVK--------ASSPNTGC--GEKRRELEFLAFQCTKKQRIVGAL 340
           LFGV+I+K         S    GC  G++ RE++ LA +C+KKQRIVGAL
Sbjct: 335 LFGVNILKIPGVGGVVESGNIGGCNGGKRMREMDLLALECSKKQRIVGAL 383

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: gi|731370595|ref|XP_002281709.2| (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Vitis vinifera])

HSP 1 Score: 434.5 bits (1116), Expect = 1.7e-118
Identity = 235/335 (70.15%), Postives = 270/335 (80.60%), Query Frame = 1

Query: 24  SHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL 83
           S  SLCRVGSG TSV+LDS+S  +EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL
Sbjct: 50  SPESLCRVGSG-TSVILDSES-SIEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWL 109

Query: 84  GTFNEEEEAARAYDVAAQRFRGRDAVTNFK--DEDNDDDV-SAFLNSHSKAEIVDMLRKH 143
           GTFNEEEEAA+AYD+AAQRFRGRDAVTNFK   E  +DD+ +AFLNSHSKAEIVDMLRKH
Sbjct: 110 GTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEEDDIEAAFLNSHSKAEIVDMLRKH 169

Query: 144 TYLHELHQSKRNAGLSGLDRKHNRSLS-----GLD--SEARELLFEKAVTPSDVGKLNRL 203
           TY  EL QSKRN GL   + K +R+       G D  +++RE LFEK VTPSDVGKLNRL
Sbjct: 170 TYNDELEQSKRNYGLDA-NGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRL 229

Query: 204 VIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVK 263
           VIPKQHAEK+FPLQTG+T  SKG+LLNFED GGKVWRFRYSYWNSSQSYVLTKGWSRFVK
Sbjct: 230 VIPKQHAEKHFPLQTGTT--SKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVK 289

Query: 264 EKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPN-INPVHIVRLFGVDIVK----- 323
           EKNLK GDIVSF +S G DKQLYI+WK+R   PT   N + PV +VRLFGV+I K     
Sbjct: 290 EKNLKAGDIVSFQRSTGGDKQLYIDWKARN-GPTNQINPVEPVEMVRLFGVNIFKVPVNS 349

Query: 324 ---ASSPNTGCGEKRRELEFLAFQCTKKQRIVGAL 340
               ++  +  G++  E+E L+F+C+KKQR++GA+
Sbjct: 350 SVVVANNGSWTGKRMIEMELLSFECSKKQRVIGAV 378

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RAV1_ARATH1.2e-10866.67AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia... [more]
RAV2_ARATH1.5e-10662.84AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha... [more]
RAVL1_ARATH2.0e-10361.95AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha... [more]
RAVL4_ARATH1.4e-9662.66AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali... [more]
Y5498_ORYSJ2.8e-8958.36AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. jap... [more]
Match NameE-valueIdentityDescription
A0A0A0KR17_CUCSA3.4e-15085.11DNA-binding protein RAV1 OS=Cucumis sativus GN=Csa_5G608380 PE=4 SV=1[more]
A0A068TYZ8_COFCA4.8e-12069.12Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032561001 PE=4 SV=1[more]
H9MHJ7_CASSA4.1e-11967.71RAV1 OS=Castanea sativa PE=2 SV=1[more]
F6HFQ2_VITVI1.2e-11870.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03070 PE=4 SV=... [more]
B9SEJ0_RICCO2.3e-11769.94DNA-binding protein RAV1, putative OS=Ricinus communis GN=RCOM_0705620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G13260.16.9e-11066.67 related to ABI3/VP1 1[more]
AT1G68840.18.5e-10862.84 related to ABI3/VP1 2[more]
AT1G25560.11.1e-10461.95 AP2/B3 transcription factor family protein[more]
AT3G25730.17.9e-9862.66 ethylene response DNA binding factor 3[more]
AT3G61970.19.9e-4066.67 AP2/B3-like transcriptional factor family protein[more]
Match NameE-valueIdentityDescription
gi|659091453|ref|XP_008446558.1|5.8e-15186.02PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [C... [more]
gi|449434658|ref|XP_004135113.1|4.9e-15085.11PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [C... [more]
gi|661896000|emb|CDP00578.1|7.0e-12069.12unnamed protein product [Coffea canephora][more]
gi|374259661|gb|AEZ02303.1|5.9e-11967.71RAV1 [Castanea sativa][more]
gi|731370595|ref|XP_002281709.2|1.7e-11870.15PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Viti... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
IPR001471AP2/ERF_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13750.1Cp4.1LG01g13750.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 58..114
score: 4.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 57..105
score: 3.
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 58..119
score: 3.6
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 58..113
score: 20
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 178..282
score: 2.3
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 178..283
score: 4.4
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 178..283
score: 13
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 171..288
score: 9.7
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 176..281
score: 9.16
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 57..114
score: 9.15
NoneNo IPR availablePANTHERPTHR31140FAMILY NOT NAMEDcoord: 27..307
score: 1.2E
NoneNo IPR availablePANTHERPTHR31140:SF3AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATEDcoord: 27..307
score: 1.2E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g13750Cp4.1LG09g02730Cucurbita pepo (Zucchini)cpecpeB035