Cp4.1LG01g13440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g13440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix-loop-helix transcription factor
LocationCp4.1LG01 : 8212035 .. 8214586 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGGAGAGATTTGCAGAGAGAGATATAGATGACTGAGGGAAAAGAAAAGAGAGAGATATAGATGACTGAGGGAAAAGAAAAGGATTATCAGAAGAGAATACAAAAGGGAACCAAAAAGACCCAAAATCAAAGCTAAAGATTTTGATCAAAAGGAATACAAACCTTTTATACTTCGTTTTTGGAGTGATATGCGTGGGGAAGATCAGCAAGAGGAACATCATCAGCAACAACAGGAGTGTTCACAAACAATTGAGAATATGTTTCAACAACAGCTTCTTCTCCACCAACACCTACAAAACAACAACGACGACGACAACAACAACGGAGACCATCATCATGGAACTGGAAGAGGGTTAATTTTTCCACCCGAACTCGTGTCGCCGGTTCTCCAGCCGTGGTCGTCGTCGCTTAACCCTTTTATGATCCCTCCCCCGCCATCGTTGCCATGTTCATCATCATCATCCTATGGTGGTTTGTTTAACCGGAGACCACCTAATTGTGTTCAGTTTGCTTATGATGGTTCCTCTTCCGCGGACCATCTAGGTCAGATCATATCCACCACGCTTGGACCCGTGGTTCATCCTGGCTCCATGGCTCCCTTTGGGCTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATTATGGATGCTAAAGCTCTTGCAGCTTCTAAAAGCCACAGTGAAGCTGAGAGGAGGAGAAGAGAAAGAATCAACAACCATCTGGCTAAGCTCCGGAGCTTACTCCCTAATACCACTAAAGTAAGCATTTTTATATTCAAATCCCCATTCCCATTAATCTAACTTCGCATATATATGCTTTCACGTATTATATTGATTTTCACATACCCTTTGGTTTCTTTGTTTTTATATTAATTCCTACTCTCTTGCATTGTTCTTTTGGATCAAGTTTCAATCTTTGAACATATACAATACAAAGCTTAGTTAGGCTTTTAAAATATCAAGTTTTACCTCTCCTTCATGGGTTTTTCCCCCTCGAAAGGGTTAGTTCTAGGTAATCGCATGAGATCTCATATTGGTTGGAGAGGGGAACGAACCATTCCTTATAAGGGTATGGAAACCTCTCCCTAGTAGACACATTTTAAAACCGTGAGAGTGACGGTGATATGTAACGAGTTGAAGCGGACACTGTTTACTAGCGGTGGGCTTGGGCTCTTACAGATGGTATCAAAGCTAGACATTGGGTGGTGTGCCAGCGAGAACACTGGTCCTGGAATGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTATGGAAACCGCCCCCTAGTAAACACGTTTTAAAACTGTGAGGCTGACGGCGATACGTAACGGGCTGAAGCAGATAATGTTTATTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAAAGTCAGGCACCGGGCAGCGTGTTAGTGAGGACGCTAGTCCCTAAGGGGGGTGGATTGTGAGACCCAACATCGGCCGGAGAAGGGAACAAAACATTTCTGATAAGATTGTGGAAACCTTTCTATAGTAGACGCGATTAAAGACCATGAGACTGGCGACGATAACCTAACAAGCCGAAGTAAACAATATGTACTAGTGGTAGGCCTGGACTGTTACAAATAGGATCAGAGCCAGACACTTGGACACGGACTCCCAAAAGGGGTGGATTGTGAGATCCCACCTCGGTTAGAGAGGTGAAAGAAGCATTCAGTGTGGAAACCTCTCCCTAGAAGACACGTTTCAAAACTATGAGGCTGATGACAATACGTAACGGACCAAAGCAGACAATATTTACTAACAATTAACTTTGAGTTTACATAGGTTTGATATTGATAAGCTTTGTATTTCTCGTGAATAAAAGAAGTTACACCAAAAGGGTAGAATTAGGGTTAATACTTACGTAGTTTTGGTTGAATTTTATACGTATATACACACAGACGGACAAAGCTTCACTACTAGCCGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAGACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGAAGTTGACGAGGTAACAGTGGACGATGCCTCAGAGGAGATGATGATAAGTGGAGCCAAATTTGTAATAAAGGCTTCCCTTTGCTGCGAGGACCGTTCTGATCTCCTCCCGGACCTCATCAAAGCCCTCAAATCCTTGCGTTTAAGAACCCTCAAAGCTGAAATCACGACGCTTGGTGGGCGTGTAAGAAATGTGTTGTTTATCACAGCTGAAGAAGAGCAACAACATGATCCCGAACAGCAACACAATATGAGCTCTATTCAAGAAGCACTCAAAGCTGTGATGGAAAGAACAGGAGGGGATGATTCTTCTTCAGCAAATATCAAAAGACTAAGGACCACAAATAACATCAATATCCTTTGATTTATGGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTNATGAAGTTAAAAGGAAAAACCCTAATGAGGCATGGCTCCTTTTTTAAAAATGGATATCCACTCGCTTGGTTTCAACCACGTTTTGTTACCTTCCATATACAACTTTGTA

mRNA sequence

CAGGGAGAGATTTGCAGAGAGAGATATAGATGACTGAGGGAAAAGAAAAGAGAGAGATATAGATGACTGAGGGAAAAGAAAAGGATTATCAGAAGAGAATACAAAAGGGAACCAAAAAGACCCAAAATCAAAGCTAAAGATTTTGATCAAAAGGAATACAAACCTTTTATACTTCGTTTTTGGAGTGATATGCGTGGGGAAGATCAGCAAGAGGAACATCATCAGCAACAACAGGAGTGTTCACAAACAATTGAGAATATGTTTCAACAACAGCTTCTTCTCCACCAACACCTACAAAACAACAACGACGACGACAACAACAACGGAGACCATCATCATGGAACTGGAAGAGGGTTAATTTTTCCACCCGAACTCGTGTCGCCGGTTCTCCAGCCGTGGTCGTCGTCGCTTAACCCTTTTATGATCCCTCCCCCGCCATCGTTGCCATGTTCATCATCATCATCCTATGGTGGTTTGTTTAACCGGAGACCACCTAATTGTGTTCAGTTTGCTTATGATGGTTCCTCTTCCGCGGACCATCTAGGTCAGATCATATCCACCACGCTTGGACCCGTGGTTCATCCTGGCTCCATGGCTCCCTTTGGGCTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATTATGGATGCTAAAGCTCTTGCAGCTTCTAAAAGCCACAGTGAAGCTGAGAGGAGGAGAAGAGAAAGAATCAACAACCATCTGGCTAAGCTCCGGAGCTTACTCCCTAATACCACTAAAACGGACAAAGCTTCACTACTAGCCGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAGACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGAAGTTGACGAGGTAACAGTGGACGATGCCTCAGAGGAGATGATGATAAGTGGAGCCAAATTTGTAATAAAGGCTTCCCTTTGCTGCGAGGACCGTTCTGATCTCCTCCCGGACCTCATCAAAGCCCTCAAATCCTTGCGTTTAAGAACCCTCAAAGCTGAAATCACGACGCTTGGTGGGCGTGTAAGAAATGTGTTGTTTATCACAGCTGAAGAAGAGCAACAACATGATCCCGAACAGCAACACAATATGAGCTCTATTCAAGAAGCACTCAAAGCTGTGATGGAAAGAACAGGAGGGGATGATTCTTCTTCAGCAAATATCAAAAGACTAAGGACCACAAATAACATCAATATCCTTTGATTTATGGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTNATGAAGTTAAAAGGAAAAACCCTAATGAGGCATGGCTCCTTTTTTAAAAATGGATATCCACTCGCTTGGTTTCAACCACGTTTTGTTACCTTCCATATACAACTTTGTA

Coding sequence (CDS)

ATGCGTGGGGAAGATCAGCAAGAGGAACATCATCAGCAACAACAGGAGTGTTCACAAACAATTGAGAATATGTTTCAACAACAGCTTCTTCTCCACCAACACCTACAAAACAACAACGACGACGACAACAACAACGGAGACCATCATCATGGAACTGGAAGAGGGTTAATTTTTCCACCCGAACTCGTGTCGCCGGTTCTCCAGCCGTGGTCGTCGTCGCTTAACCCTTTTATGATCCCTCCCCCGCCATCGTTGCCATGTTCATCATCATCATCCTATGGTGGTTTGTTTAACCGGAGACCACCTAATTGTGTTCAGTTTGCTTATGATGGTTCCTCTTCCGCGGACCATCTAGGTCAGATCATATCCACCACGCTTGGACCCGTGGTTCATCCTGGCTCCATGGCTCCCTTTGGGCTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATTATGGATGCTAAAGCTCTTGCAGCTTCTAAAAGCCACAGTGAAGCTGAGAGGAGGAGAAGAGAAAGAATCAACAACCATCTGGCTAAGCTCCGGAGCTTACTCCCTAATACCACTAAAACGGACAAAGCTTCACTACTAGCCGAAGTAATACAACACGTGAAAGAGCTAAAACGGCAGACATCATTGATAGCAGAAACAAGTCCAATCCCAACAGAAGTTGACGAGGTAACAGTGGACGATGCCTCAGAGGAGATGATGATAAGTGGAGCCAAATTTGTAATAAAGGCTTCCCTTTGCTGCGAGGACCGTTCTGATCTCCTCCCGGACCTCATCAAAGCCCTCAAATCCTTGCGTTTAAGAACCCTCAAAGCTGAAATCACGACGCTTGGTGGGCGTGTAAGAAATGTGTTGTTTATCACAGCTGAAGAAGAGCAACAACATGATCCCGAACAGCAACACAATATGAGCTCTATTCAAGAAGCACTCAAAGCTGTGATGGAAAGAACAGGAGGGGATGATTCTTCTTCAGCAAATATCAAAAGACTAAGGACCACAAATAACATCAATATCCTTTGA

Protein sequence

MRGEDQQEEHHQQQQECSQTIENMFQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQPWSSSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDGSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVDDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINIL
Homology
[Close]
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 197/356 (55.34%), Postives = 251/356 (70.51%), Query Frame = 1 

Query: 4   EDQQEEHHQQQQECSQTIEN----MFQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGL-IF 63
           ++++EE  +   E    I+N    +F  QL+ H H  +++   +         G G  IF
Sbjct: 5   KEEEEEEEEDSSEAMNNIQNYQNDLFFHQLISHHHHHHHDPSQSETLGASGNVGSGFTIF 64

Query: 64  PPELVSPV--LQPWSSSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNC--VQFAYDG--- 123
             + VSP+  L P +S   PF   PPPS   S +S YG  FNR   +   +QF Y+G   
Sbjct: 65  SQDSVSPIWSLPPPTSIQPPFDQFPPPS--SSPASFYGSFFNRSRAHHQGLQFGYEGFGG 124

Query: 124 -SSSADHLGQ---IISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEA 183
            +S+A H  +   I+S  LGPVV  GS  PFGLQAELGKM+AQEIMDAKALAASKSHSEA
Sbjct: 125 ATSAAHHHHEQLRILSEALGPVVQAGS-GPFGLQAELGKMTAQEIMDAKALAASKSHSEA 184

Query: 184 ERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDE 243
           ERRRRERINNHLAKLRS+LPNTTKTDKASLLAEVIQHVKELKR+TS+I+ET+ +PTE DE
Sbjct: 185 ERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDE 244

Query: 244 VTVDDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRN 303
           +TV    EE    G +FVIKASLCCEDRSDLLPD+IK LK++RL+TLKAEITT+GGRV+N
Sbjct: 245 LTVAFTEEEETGDG-RFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKN 304

Query: 304 VLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSA-NIKRLRTTNNINI 343
           VLF+T EE    + E+++ + +I+EALKAVME++  ++SSS+ N KR R +++  I
Sbjct: 305 VLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTI 356

[Close]
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.0e-57
Identity = 165/379 (43.54%), Postives = 214/379 (56.46%), Query Frame = 1 

Query: 13  QQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQPW 72
           ++++C QT  N+  +Q Q  LH H                              P + PW
Sbjct: 5   KEEDCLQTFHNLQDYQDQFHLHHH------------------------------PQILPW 64

Query: 73  SS----SLNPFMIPPPPSL-------------PCSSSSSYGGLFNRRPPNCVQFAYDGSS 132
           SS    S +P   P  P+                SSS  Y   F   PP+          
Sbjct: 65  SSTSLPSFDPLHFPSNPTRYSDPVHYFNRRASSSSSSFDYNDGFVSPPPSM-------DH 124

Query: 133 SADHLGQIISTTLGPVVHPGSMAPFGLQAEL-GKMSAQEIMDAKALAASKSHSEAERRRR 192
             +HL +I+S  LGP++  GS   FG   E+ GK+SAQE+MDAKALAASKSHSEAERRRR
Sbjct: 125 PQNHL-RILSEALGPIMRRGSS--FGFDGEIMGKLSAQEVMDAKALAASKSHSEAERRRR 184

Query: 193 ERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVDD 252
           ERIN HLAKLRS+LPNTTKTDKASLLAEVIQH+KELKRQTS I +T  +PTE D++TVD 
Sbjct: 185 ERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDS 244

Query: 253 ASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFIT 312
           +  +        VI+AS CC+DR+DL+ D+I ALKSLRLRTLKAEI T+GGRV+N+LF++
Sbjct: 245 SYND---EEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLS 304

Query: 313 AE--EEQQHDP-------------EQQHNMSSI----QEALKAVMER-----------TG 342
            E  +E+ HD              +++  M++     +EALKAV+E+             
Sbjct: 305 REYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDESNDNNN 340

[Close]
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33
Identity = 92/204 (45.10%), Postives = 138/204 (67.65%), Query Frame = 1 

Query: 144 LGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQ 203
           +G+  AQ+    +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q
Sbjct: 55  IGETMAQD----RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQ 114

Query: 204 HVKELKRQTSLIAETSP--IPTEVDEVTVDDASEEMMISGAKFVIKASLCCEDRSDLLPD 263
            V+ELK+QT   +++    +P+E DE++V    +    +    + KASLCCEDRSDLLPD
Sbjct: 115 RVRELKQQTLETSDSDQTLLPSETDEISVLHFGD--YSNDGHIIFKASLCCEDRSDLLPD 174

Query: 264 LIKALKSLRLRTLKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNM-----SSIQEALKA 323
           L++ LKSL ++TL+AE+ T+GGR R+VL + A++E  H  E  H +     S ++ + K+
Sbjct: 175 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKE-MHGVESVHFLQNALKSLLERSSKS 234

Query: 324 VMERTGGDDSSSANIKRLRTTNNI 341
           +MER+ G      + KR R  ++I
Sbjct: 235 LMERSSGGGGGERS-KRRRALDHI 250

[Close]
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.2e-32
Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 1 

Query: 152 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQ 211
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 212 TSLIAETSPIPTEVDEVTVDDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRL 271
           T  I + + IP+E DE++V +  +       + + K S CCEDR +LL DL++ LKSL++
Sbjct: 97  TLEITDET-IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 272 RTLKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTG-------GD 331
            TL A++TT+GGR RNVL + A++E  H   Q  N   +Q ALK+++ER+        G 
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKE--HHGVQSVNF--LQNALKSLLERSSKSVMVGHGG 216

Query: 332 DSSSANIKRLRTTNNI 341
                 +KR R  ++I
Sbjct: 217 GGGEERLKRRRALDHI 227

[Close]
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-24
Identity = 69/182 (37.91%), Postives = 114/182 (62.64%), Query Frame = 1 

Query: 156 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLI 215
           KA + S+SH  AE+RRR+RIN+HL  LR L+PN+ K DKA+LLA VI+ VKELK++ +  
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 216 AETSPIPTEVDEVTVDDASEEMMISGAKFVI-KASLCCEDRSDLLPDLIKALKSLRLRTL 275
                +PTE DEVTV   +     S    +I KAS CCED+ + + ++I+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 276 KAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRL 335
           +AEI ++GGR+R + FI  +           +  +++++L + + R     ++++++ R+
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCRI 238

Query: 336 RT 337
           R+
Sbjct: 239 RS 239

[Close]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match: A0A0A0KR14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608330 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 3.2e-135
Identity = 283/362 (78.18%), Postives = 307/362 (84.81%), Query Frame = 1 

Query: 1   MRGEDQQEEHHQQQQ--ECSQTIENMFQQQLLLHQHLQNNNDDDNNNGDHH--------- 60
           M GEDQ+E+H QQQ   ECSQTIENMFQ+QLLLHQ    NND D+NN DHH         
Sbjct: 1   MCGEDQEEDHQQQQHQGECSQTIENMFQEQLLLHQQQLQNNDGDHNNNDHHMMYGVEHHH 60

Query: 61  HGTGR-GLIFPPELVSPVLQPWSSSLNPFMIPPPP------SLPCSSSSSYGGLFNRRPP 120
           HG GR GLIFPPE++ P+LQPWSS LNPFMIPPPP      SL CSS SSYG LFNRRPP
Sbjct: 61  HGIGRSGLIFPPEVMPPMLQPWSS-LNPFMIPPPPPPPLPTSLSCSS-SSYGSLFNRRPP 120

Query: 121 NCVQFAYDGSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASK 180
           NC+QFAYDG SSADHLG+IISTTLGPVVHPGS APFGLQAELGKMSAQEIMDAKALAASK
Sbjct: 121 NCLQFAYDGPSSADHLGRIISTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASK 180

Query: 181 SHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIP 240
           SHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVI+HVKELKRQTS+IAETSPIP
Sbjct: 181 SHSEAERRRRERINNHLAKLRSILPSTTKTDKASLLAEVIEHVKELKRQTSIIAETSPIP 240

Query: 241 TEVDEVTVDDASEEMMI---------SGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRT 300
           TEVDEV+VDDASE+ M+         S AKFVIKASLCCEDRSDLLPDLIK LKSLRL T
Sbjct: 241 TEVDEVSVDDASEQEMMMISNNGSISSSAKFVIKASLCCEDRSDLLPDLIKTLKSLRLTT 300

Query: 301 LKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSS-IQEALKAVMERTGGD-DSSSANI 334
           LKAEITTLGGR+RNVLF+TA+EEQQ    QQHN++S IQ+ALKAV+E+T GD DSSSANI
Sbjct: 301 LKAEITTLGGRLRNVLFVTADEEQQ----QQHNITSIIQDALKAVIEKTAGDHDSSSANI 356

[Close]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match: F6HF16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.3e-103
Identity = 238/361 (65.93%), Postives = 275/361 (76.18%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGTGR-GLIFPPELVSPVLQ 71
           + Q ECSQTI N+  +Q+QLLL QH Q       NN  +  G GR GLIFP   VSP+LQ
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQ---NNDAYGGGGGRSGLIFPE--VSPILQ 66

Query: 72  PWS-----------------SSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDG 131
           PWS                    +PF++PPPPS       +YG +FNRR P  +QFAY+G
Sbjct: 67  PWSFPPVHAFNPAHFAANPVRDHDPFLVPPPPS-------AYGSVFNRRAP-ALQFAYEG 126

Query: 132 SSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRR 191
            SS +HL +IIS TLGPVV PGS +PFGLQAELGKM+AQEIMDAKALAASKSHSEAERRR
Sbjct: 127 PSS-EHL-RIISDTLGPVVQPGS-SPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRR 186

Query: 192 RERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVD 251
           RERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQTSLIAE+SP+PTE+DE+TVD
Sbjct: 187 RERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELTVD 246

Query: 252 DASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFI 311
            + E+      KFVIKASLCCEDR+DLLPDLIK LK+LRLRTLKAEITTLGGRV+NVLFI
Sbjct: 247 TSDED-----GKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFI 306

Query: 312 TAEE---------EQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINI 344
           T EE         +QQ   +QQ+++SSIQEALKAVME+TGGD+SSS ++KR RT  NINI
Sbjct: 307 TGEEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT--NINI 344

[Close]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match: A0A061EB14_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011873 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 8.7e-101
Identity = 236/357 (66.11%), Postives = 271/357 (75.91%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQ-NNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQ 71
           + Q ECSQ I N+  +Q+QLL+ QH Q   +     N D   GT  GLIFP   VSP+L 
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFGGTRGGLIFPE--VSPIL- 66

Query: 72  PWS----SSLNP-------------FMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDG 131
           PWS     S NP             F++PPPPS       SYG LFNRR P  +QFAYDG
Sbjct: 67  PWSLPPVHSFNPAHFNGNQVRDHDPFLVPPPPS-------SYGALFNRRAP-ALQFAYDG 126

Query: 132 SSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRR 191
            S+ DHL +I+S TLGPVV PGS APFGLQAELGKM+AQEIMDAKALAASKSHSEAERRR
Sbjct: 127 PST-DHL-RILSDTLGPVVQPGS-APFGLQAELGKMTAQEIMDAKALAASKSHSEAERRR 186

Query: 192 RERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVD 251
           RERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQTSLIAETSP+PTE+DE+TVD
Sbjct: 187 RERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVD 246

Query: 252 DASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFI 311
            + E+      KF+IKASLCCEDRSDLLPDLIK LK+LRL+TLKAEITTLGGRV+NVLFI
Sbjct: 247 TSDED-----GKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFI 306

Query: 312 TAEEE-----QQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINIL 344
           T EE+      Q   +QQ+++SSIQEALKAVME+T GD+SS+ ++KR RT  NI+IL
Sbjct: 307 TGEEDSSSSGDQQQQQQQYSVSSIQEALKAVMEKTSGDESSAGSVKRQRT--NISIL 342

[Close]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match: A0A0B0N1U5_GOSAR (Transcription factor bHLH30-like protein OS=Gossypium arboreum GN=F383_03211 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 7.4e-100
Identity = 236/356 (66.29%), Postives = 268/356 (75.28%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQP 71
           + Q ECSQTI N+  +Q+QL + Q  Q      +N  D   GT  GLIFP   VSP+L P
Sbjct: 7   EDQGECSQTIHNIQGYQEQLYMQQQHQQMQQQQHNI-DLFGGTRGGLIFPE--VSPIL-P 66

Query: 72  WS-----------------SSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDGS 131
           WS                    +PF++PPPP+       SYGGLFNRR P+ +QFAYDG+
Sbjct: 67  WSLPPIHNFNPALFTGNPVRDDDPFLVPPPPT-------SYGGLFNRRAPS-LQFAYDGT 126

Query: 132 SSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRRR 191
           S ADHL +I+S TLGPVV PGS APFGLQAELGKM+AQEIMDAKALAASKSHSEAERRRR
Sbjct: 127 S-ADHL-RILSDTLGPVVQPGS-APFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRR 186

Query: 192 ERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVDD 251
           ERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQTSLIAETSP+PTE+DE+TVD 
Sbjct: 187 ERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVDT 246

Query: 252 ASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFIT 311
           + E+      KFVIKASLCCEDRSDLLPDLIK LK+LRL+TLKAEITTLGGRV+NVLFIT
Sbjct: 247 SEED-----GKFVIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFIT 306

Query: 312 AEEEQQHDPEQQHN-----MSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINIL 344
            EE+     EQQ       +SSIQEALKAVME+T  D+SSS N+KR RT  NI+IL
Sbjct: 307 GEEDSSSSAEQQQQQLQYCISSIQEALKAVMEKTSVDESSSGNVKRQRT--NISIL 340

[Close]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match: B9HWM2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010g PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.3e-99
Identity = 237/361 (65.65%), Postives = 267/361 (73.96%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGT-GRGLIFPPELVSPVLQ 71
           + Q ECSQTI N+  +Q+QLLL  H Q        + D + G  G G IFP   VSP+L 
Sbjct: 7   EDQGECSQTIHNLQNYQEQLLLQYHQQMQQHQQQQSSDIYGGARGSGFIFPE--VSPIL- 66

Query: 72  PWS----SSLNP--------------FMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYD 131
           PW      S NP              F+IPPP        SSYGGLFNRR P+ +QFAYD
Sbjct: 67  PWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVP------SSYGGLFNRRAPS-LQFAYD 126

Query: 132 GSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERR 191
           G+ S DHL +IIS TLGPVV PGS APFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 127 GTPS-DHL-RIISDTLGPVVQPGS-APFGLQAELSKMTAQEIMDAKALAASKSHSEAERR 186

Query: 192 RRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTV 251
           RRERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIAETSP+PTE+DE+TV
Sbjct: 187 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVPTEMDELTV 246

Query: 252 DDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLF 311
           D A E+      KFVIKASLCCEDR DLLPDLIK LK+LRLRTLKAEITTLGGRV+NVLF
Sbjct: 247 DTADED-----GKFVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLF 306

Query: 312 ITAEEEQQHDPEQQH--------NMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINI 344
           I+ EE+   D   QH        ++SSIQEALKAVME+TGGD+SSS ++KR RT  NIN+
Sbjct: 307 ISGEEDSSSDSNDQHQQQEPLQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT--NINL 347

[Close]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 301.2 bits (770), Expect = 8.1e-82
Identity = 197/356 (55.34%), Postives = 251/356 (70.51%), Query Frame = 1 

Query: 4   EDQQEEHHQQQQECSQTIEN----MFQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGL-IF 63
           ++++EE  +   E    I+N    +F  QL+ H H  +++   +         G G  IF
Sbjct: 5   KEEEEEEEEDSSEAMNNIQNYQNDLFFHQLISHHHHHHHDPSQSETLGASGNVGSGFTIF 64

Query: 64  PPELVSPV--LQPWSSSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNC--VQFAYDG--- 123
             + VSP+  L P +S   PF   PPPS   S +S YG  FNR   +   +QF Y+G   
Sbjct: 65  SQDSVSPIWSLPPPTSIQPPFDQFPPPS--SSPASFYGSFFNRSRAHHQGLQFGYEGFGG 124

Query: 124 -SSSADHLGQ---IISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEA 183
            +S+A H  +   I+S  LGPVV  GS  PFGLQAELGKM+AQEIMDAKALAASKSHSEA
Sbjct: 125 ATSAAHHHHEQLRILSEALGPVVQAGS-GPFGLQAELGKMTAQEIMDAKALAASKSHSEA 184

Query: 184 ERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDE 243
           ERRRRERINNHLAKLRS+LPNTTKTDKASLLAEVIQHVKELKR+TS+I+ET+ +PTE DE
Sbjct: 185 ERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDE 244

Query: 244 VTVDDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRN 303
           +TV    EE    G +FVIKASLCCEDRSDLLPD+IK LK++RL+TLKAEITT+GGRV+N
Sbjct: 245 LTVAFTEEEETGDG-RFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKN 304

Query: 304 VLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSA-NIKRLRTTNNINI 343
           VLF+T EE    + E+++ + +I+EALKAVME++  ++SSS+ N KR R +++  I
Sbjct: 305 VLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTI 356

[Close]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-58
Identity = 165/379 (43.54%), Postives = 214/379 (56.46%), Query Frame = 1 

Query: 13  QQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQPW 72
           ++++C QT  N+  +Q Q  LH H                              P + PW
Sbjct: 5   KEEDCLQTFHNLQDYQDQFHLHHH------------------------------PQILPW 64

Query: 73  SS----SLNPFMIPPPPSL-------------PCSSSSSYGGLFNRRPPNCVQFAYDGSS 132
           SS    S +P   P  P+                SSS  Y   F   PP+          
Sbjct: 65  SSTSLPSFDPLHFPSNPTRYSDPVHYFNRRASSSSSSFDYNDGFVSPPPSM-------DH 124

Query: 133 SADHLGQIISTTLGPVVHPGSMAPFGLQAEL-GKMSAQEIMDAKALAASKSHSEAERRRR 192
             +HL +I+S  LGP++  GS   FG   E+ GK+SAQE+MDAKALAASKSHSEAERRRR
Sbjct: 125 PQNHL-RILSEALGPIMRRGSS--FGFDGEIMGKLSAQEVMDAKALAASKSHSEAERRRR 184

Query: 193 ERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVDD 252
           ERIN HLAKLRS+LPNTTKTDKASLLAEVIQH+KELKRQTS I +T  +PTE D++TVD 
Sbjct: 185 ERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDS 244

Query: 253 ASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFIT 312
           +  +        VI+AS CC+DR+DL+ D+I ALKSLRLRTLKAEI T+GGRV+N+LF++
Sbjct: 245 SYND---EEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLS 304

Query: 313 AE--EEQQHDP-------------EQQHNMSSI----QEALKAVMER-----------TG 342
            E  +E+ HD              +++  M++     +EALKAV+E+             
Sbjct: 305 REYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDESNDNNN 340

[Close]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-34
Identity = 92/204 (45.10%), Postives = 138/204 (67.65%), Query Frame = 1 

Query: 144 LGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQ 203
           +G+  AQ+    +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q
Sbjct: 55  IGETMAQD----RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQ 114

Query: 204 HVKELKRQTSLIAETSP--IPTEVDEVTVDDASEEMMISGAKFVIKASLCCEDRSDLLPD 263
            V+ELK+QT   +++    +P+E DE++V    +    +    + KASLCCEDRSDLLPD
Sbjct: 115 RVRELKQQTLETSDSDQTLLPSETDEISVLHFGD--YSNDGHIIFKASLCCEDRSDLLPD 174

Query: 264 LIKALKSLRLRTLKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNM-----SSIQEALKA 323
           L++ LKSL ++TL+AE+ T+GGR R+VL + A++E  H  E  H +     S ++ + K+
Sbjct: 175 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKE-MHGVESVHFLQNALKSLLERSSKS 234

Query: 324 VMERTGGDDSSSANIKRLRTTNNI 341
           +MER+ G      + KR R  ++I
Sbjct: 235 LMERSSGGGGGERS-KRRRALDHI 250

[Close]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-33
Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 1 

Query: 152 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQ 211
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 212 TSLIAETSPIPTEVDEVTVDDASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRL 271
           T  I + + IP+E DE++V +  +       + + K S CCEDR +LL DL++ LKSL++
Sbjct: 97  TLEITDET-IPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 272 RTLKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTG-------GD 331
            TL A++TT+GGR RNVL + A++E  H   Q  N   +Q ALK+++ER+        G 
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKE--HHGVQSVNF--LQNALKSLLERSSKSVMVGHGG 216

Query: 332 DSSSANIKRLRTTNNI 341
                 +KR R  ++I
Sbjct: 217 GGGEERLKRRRALDHI 227

[Close]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-25
Identity = 69/182 (37.91%), Postives = 114/182 (62.64%), Query Frame = 1 

Query: 156 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLI 215
           KA + S+SH  AE+RRR+RIN+HL  LR L+PN+ K DKA+LLA VI+ VKELK++ +  
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 216 AETSPIPTEVDEVTVDDASEEMMISGAKFVI-KASLCCEDRSDLLPDLIKALKSLRLRTL 275
                +PTE DEVTV   +     S    +I KAS CCED+ + + ++I+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 276 KAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRL 335
           +AEI ++GGR+R + FI  +           +  +++++L + + R     ++++++ R+
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCRI 238

Query: 336 RT 337
           R+
Sbjct: 239 RS 239

[Close]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match: gi|659091443|ref|XP_008446553.1| (PREDICTED: transcription factor bHLH30-like [Cucumis melo])

HSP 1 Score: 491.9 bits (1265), Expect = 9.1e-136
Identity = 288/371 (77.63%), Postives = 313/371 (84.37%), Query Frame = 1 

Query: 1   MRGEDQQEEHHQQQQ-ECSQTIENMFQQQLLLHQHLQNNNDDDNNNGDH--------HHG 60
           M GEDQ+E+H QQ Q ECSQTIENMFQ+QLLL Q LQNN+ D +NN  H        HHG
Sbjct: 84  MCGEDQEEDHQQQHQGECSQTIENMFQEQLLLQQQLQNNDGDQSNNDHHMIYGVEHHHHG 143

Query: 61  TGRG--LIFPPELVSPVLQPWSSSLNPFMIPPPP------SLPCSSSSSYGGLFNRRPPN 120
            GR   LIFPPE++ P+LQPWS SLNPFMIPPPP      SL C SSSSYG LFNRRPPN
Sbjct: 144 IGRSGSLIFPPEVMPPMLQPWS-SLNPFMIPPPPPPPLPTSLSC-SSSSYGSLFNRRPPN 203

Query: 121 CVQFAYDGSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKS 180
           C+QFAYDG SSADHLG+IISTTLGPVVHPGS APFGLQAELGKMSAQEIMDAKALAASKS
Sbjct: 204 CLQFAYDGPSSADHLGRIISTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASKS 263

Query: 181 HSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPT 240
           HSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVI+HVKELKRQTS+IAETSPIPT
Sbjct: 264 HSEAERRRRERINNHLAKLRSILPSTTKTDKASLLAEVIEHVKELKRQTSIIAETSPIPT 323

Query: 241 EVDEVTVDDASEEMMI---------SGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTL 300
           EVDEV+VDDASE+ M+         S AKFVIKASLCCEDRSDLLPDLIK LKSLRL TL
Sbjct: 324 EVDEVSVDDASEQEMMMISNNGSISSSAKFVIKASLCCEDRSDLLPDLIKTLKSLRLTTL 383

Query: 301 KAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSS-IQEALKAVMERTGGD-DSSSANIK 342
           KAEITTLGGR+RNVLF+TA+EEQQ    QQHN++S IQ+ALKAV+E+T GD DSSSANIK
Sbjct: 384 KAEITTLGGRLRNVLFVTADEEQQ----QQHNITSIIQDALKAVIEKTAGDHDSSSANIK 443

[Close]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match: gi|778705888|ref|XP_004135410.2| (PREDICTED: transcription factor bHLH30, partial [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 4.5e-135
Identity = 283/362 (78.18%), Postives = 307/362 (84.81%), Query Frame = 1 

Query: 1   MRGEDQQEEHHQQQQ--ECSQTIENMFQQQLLLHQHLQNNNDDDNNNGDHH--------- 60
           M GEDQ+E+H QQQ   ECSQTIENMFQ+QLLLHQ    NND D+NN DHH         
Sbjct: 1   MCGEDQEEDHQQQQHQGECSQTIENMFQEQLLLHQQQLQNNDGDHNNNDHHMMYGVEHHH 60

Query: 61  HGTGR-GLIFPPELVSPVLQPWSSSLNPFMIPPPP------SLPCSSSSSYGGLFNRRPP 120
           HG GR GLIFPPE++ P+LQPWSS LNPFMIPPPP      SL CSS SSYG LFNRRPP
Sbjct: 61  HGIGRSGLIFPPEVMPPMLQPWSS-LNPFMIPPPPPPPLPTSLSCSS-SSYGSLFNRRPP 120

Query: 121 NCVQFAYDGSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASK 180
           NC+QFAYDG SSADHLG+IISTTLGPVVHPGS APFGLQAELGKMSAQEIMDAKALAASK
Sbjct: 121 NCLQFAYDGPSSADHLGRIISTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASK 180

Query: 181 SHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIP 240
           SHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVI+HVKELKRQTS+IAETSPIP
Sbjct: 181 SHSEAERRRRERINNHLAKLRSILPSTTKTDKASLLAEVIEHVKELKRQTSIIAETSPIP 240

Query: 241 TEVDEVTVDDASEEMMI---------SGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRT 300
           TEVDEV+VDDASE+ M+         S AKFVIKASLCCEDRSDLLPDLIK LKSLRL T
Sbjct: 241 TEVDEVSVDDASEQEMMMISNNGSISSSAKFVIKASLCCEDRSDLLPDLIKTLKSLRLTT 300

Query: 301 LKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSS-IQEALKAVMERTGGD-DSSSANI 334
           LKAEITTLGGR+RNVLF+TA+EEQQ    QQHN++S IQ+ALKAV+E+T GD DSSSANI
Sbjct: 301 LKAEITTLGGRLRNVLFVTADEEQQ----QQHNITSIIQDALKAVIEKTAGDHDSSSANI 356

[Close]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match: gi|700196868|gb|KGN52045.1| (hypothetical protein Csa_5G608330 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 4.5e-135
Identity = 283/362 (78.18%), Postives = 307/362 (84.81%), Query Frame = 1 

Query: 1   MRGEDQQEEHHQQQQ--ECSQTIENMFQQQLLLHQHLQNNNDDDNNNGDHH--------- 60
           M GEDQ+E+H QQQ   ECSQTIENMFQ+QLLLHQ    NND D+NN DHH         
Sbjct: 1   MCGEDQEEDHQQQQHQGECSQTIENMFQEQLLLHQQQLQNNDGDHNNNDHHMMYGVEHHH 60

Query: 61  HGTGR-GLIFPPELVSPVLQPWSSSLNPFMIPPPP------SLPCSSSSSYGGLFNRRPP 120
           HG GR GLIFPPE++ P+LQPWSS LNPFMIPPPP      SL CSS SSYG LFNRRPP
Sbjct: 61  HGIGRSGLIFPPEVMPPMLQPWSS-LNPFMIPPPPPPPLPTSLSCSS-SSYGSLFNRRPP 120

Query: 121 NCVQFAYDGSSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASK 180
           NC+QFAYDG SSADHLG+IISTTLGPVVHPGS APFGLQAELGKMSAQEIMDAKALAASK
Sbjct: 121 NCLQFAYDGPSSADHLGRIISTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASK 180

Query: 181 SHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIP 240
           SHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVI+HVKELKRQTS+IAETSPIP
Sbjct: 181 SHSEAERRRRERINNHLAKLRSILPSTTKTDKASLLAEVIEHVKELKRQTSIIAETSPIP 240

Query: 241 TEVDEVTVDDASEEMMI---------SGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRT 300
           TEVDEV+VDDASE+ M+         S AKFVIKASLCCEDRSDLLPDLIK LKSLRL T
Sbjct: 241 TEVDEVSVDDASEQEMMMISNNGSISSSAKFVIKASLCCEDRSDLLPDLIKTLKSLRLTT 300

Query: 301 LKAEITTLGGRVRNVLFITAEEEQQHDPEQQHNMSS-IQEALKAVMERTGGD-DSSSANI 334
           LKAEITTLGGR+RNVLF+TA+EEQQ    QQHN++S IQ+ALKAV+E+T GD DSSSANI
Sbjct: 301 LKAEITTLGGRLRNVLFVTADEEQQ----QQHNITSIIQDALKAVIEKTAGDHDSSSANI 356

[Close]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match: gi|225423869|ref|XP_002278697.1| (PREDICTED: transcription factor bHLH30 [Vitis vinifera])

HSP 1 Score: 381.7 bits (979), Expect = 1.3e-102
Identity = 238/361 (65.93%), Postives = 275/361 (76.18%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQNNNDDDNNNGDHHHGTGR-GLIFPPELVSPVLQ 71
           + Q ECSQTI N+  +Q+QLLL QH Q       NN  +  G GR GLIFP   VSP+LQ
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQ---NNDAYGGGGGRSGLIFPE--VSPILQ 66

Query: 72  PWS-----------------SSLNPFMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDG 131
           PWS                    +PF++PPPPS       +YG +FNRR P  +QFAY+G
Sbjct: 67  PWSFPPVHAFNPAHFAANPVRDHDPFLVPPPPS-------AYGSVFNRRAP-ALQFAYEG 126

Query: 132 SSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRR 191
            SS +HL +IIS TLGPVV PGS +PFGLQAELGKM+AQEIMDAKALAASKSHSEAERRR
Sbjct: 127 PSS-EHL-RIISDTLGPVVQPGS-SPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRR 186

Query: 192 RERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVD 251
           RERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQTSLIAE+SP+PTE+DE+TVD
Sbjct: 187 RERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELTVD 246

Query: 252 DASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFI 311
            + E+      KFVIKASLCCEDR+DLLPDLIK LK+LRLRTLKAEITTLGGRV+NVLFI
Sbjct: 247 TSDED-----GKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFI 306

Query: 312 TAEE---------EQQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINI 344
           T EE         +QQ   +QQ+++SSIQEALKAVME+TGGD+SSS ++KR RT  NINI
Sbjct: 307 TGEEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRT--NINI 344

[Close]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match: gi|590701106|ref|XP_007046318.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 375.2 bits (962), Expect = 1.2e-100
Identity = 236/357 (66.11%), Postives = 271/357 (75.91%), Query Frame = 1 

Query: 12  QQQQECSQTIENM--FQQQLLLHQHLQ-NNNDDDNNNGDHHHGTGRGLIFPPELVSPVLQ 71
           + Q ECSQ I N+  +Q+QLL+ QH Q   +     N D   GT  GLIFP   VSP+L 
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFGGTRGGLIFPE--VSPIL- 66

Query: 72  PWS----SSLNP-------------FMIPPPPSLPCSSSSSYGGLFNRRPPNCVQFAYDG 131
           PWS     S NP             F++PPPPS       SYG LFNRR P  +QFAYDG
Sbjct: 67  PWSLPPVHSFNPAHFNGNQVRDHDPFLVPPPPS-------SYGALFNRRAP-ALQFAYDG 126

Query: 132 SSSADHLGQIISTTLGPVVHPGSMAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRR 191
            S+ DHL +I+S TLGPVV PGS APFGLQAELGKM+AQEIMDAKALAASKSHSEAERRR
Sbjct: 127 PST-DHL-RILSDTLGPVVQPGS-APFGLQAELGKMTAQEIMDAKALAASKSHSEAERRR 186

Query: 192 RERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPIPTEVDEVTVD 251
           RERINNHLAKLRSLLP+TTKTDKASLLAEVIQHVKELKRQTSLIAETSP+PTE+DE+TVD
Sbjct: 187 RERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVD 246

Query: 252 DASEEMMISGAKFVIKASLCCEDRSDLLPDLIKALKSLRLRTLKAEITTLGGRVRNVLFI 311
            + E+      KF+IKASLCCEDRSDLLPDLIK LK+LRL+TLKAEITTLGGRV+NVLFI
Sbjct: 247 TSDED-----GKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFI 306

Query: 312 TAEEE-----QQHDPEQQHNMSSIQEALKAVMERTGGDDSSSANIKRLRTTNNINIL 344
           T EE+      Q   +QQ+++SSIQEALKAVME+T GD+SS+ ++KR RT  NI+IL
Sbjct: 307 TGEEDSSSSGDQQQQQQQYSVSSIQEALKAVMEKTSGDESSAGSVKRQRT--NISIL 342

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g13440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH030_ARATH1.4e-8055.34Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH5.0e-5743.54Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH106_ARATH2.9e-3345.10Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BH107_ARATH7.2e-3244.39Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH051_ARATH5.5e-2437.91Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
BLAST of Cp4.1LG01g13440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR14_CUCSA3.2e-13578.18Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608330 PE=4 SV=1[more]
F6HF16_VITVI9.3e-10365.93Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=... [more]
A0A061EB14_THECC8.7e-10166.11Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
A0A0B0N1U5_GOSAR7.4e-10066.29Transcription factor bHLH30-like protein OS=Gossypium arboreum GN=F383_03211 PE=... [more]
B9HWM2_POPTR1.3e-9965.65Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010... [more]
BLAST of Cp4.1LG01g13440 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68810.18.1e-8255.34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G25710.12.8e-5843.54 basic helix-loop-helix 32[more]
AT2G41130.11.6e-3445.10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G56770.14.1e-3344.39 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G40200.13.1e-2537.91 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Cp4.1LG01g13440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091443|ref|XP_008446553.1|9.1e-13677.63PREDICTED: transcription factor bHLH30-like [Cucumis melo][more]
gi|778705888|ref|XP_004135410.2|4.5e-13578.18PREDICTED: transcription factor bHLH30, partial [Cucumis sativus][more]
gi|700196868|gb|KGN52045.1|4.5e-13578.18hypothetical protein Csa_5G608330 [Cucumis sativus][more]
gi|225423869|ref|XP_002278697.1|1.3e-10265.93PREDICTED: transcription factor bHLH30 [Vitis vinifera][more]
gi|590701106|ref|XP_007046318.1|1.2e-10066.11Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13440.1Cp4.1LG01g13440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 163..217
score: 8.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 162..208
score: 1.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 165..214
score: 4.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 159..208
score: 17
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 163..214
score: 8.37
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 249..319
score: 8.
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 8..321
score: 1.5E
NoneNo IPR availablePANTHERPTHR12565:SF77TRANSCRIPTION FACTOR AIG1-RELATEDcoord: 8..321
score: 1.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g13440Cucsa.283920Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g13440CmaCh18G010470Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g13440CmaCh04G015370Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g13440CmoCh18G010650Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g13440Cla020364Watermelon (97103) v1cpewmB427
Cp4.1LG01g13440Csa5G608330Cucumber (Chinese Long) v2cpecuB442
Cp4.1LG01g13440MELO3C012213Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g13440ClCG05G023040Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g13440CSPI05G24930Wild cucumber (PI 183967)cpecpiB442
Cp4.1LG01g13440Lsi04G002930Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g13440MELO3C012213.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g13440CsaV3_5G033960Cucumber (Chinese Long) v3cpecucB0546
Cp4.1LG01g13440Bhi07G001141Wax gourdcpewgoB0557
Cp4.1LG01g13440CsGy5G024420Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g13440Carg21558Silver-seed gourdcarcpeB1451
Cp4.1LG01g13440Carg01814Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g13440Cp4.1LG09g02580Cucurbita pepo (Zucchini)cpecpeB040
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g13440Cucurbita moschata (Rifu)cmocpeB115
Cp4.1LG01g13440Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g13440Wild cucumber (PI 183967)cpecpiB381
Cp4.1LG01g13440Cucumber (Chinese Long) v2cpecuB381
Cp4.1LG01g13440Bottle gourd (USVL1VR-Ls)cpelsiB371
Cp4.1LG01g13440Watermelon (Charleston Gray)cpewcgB401
Cp4.1LG01g13440Watermelon (97103) v1cpewmB470
Cp4.1LG01g13440Melon (DHL92) v3.5.1cpemeB395
Cp4.1LG01g13440Cucumber (Gy14) v2cgybcpeB063
Cp4.1LG01g13440Melon (DHL92) v3.6.1cpemedB458
Cp4.1LG01g13440Cucumber (Chinese Long) v3cpecucB0474
Cp4.1LG01g13440Wax gourdcpewgoB0514
Cp4.1LG01g13440Cucurbita pepo (Zucchini)cpecpeB348
Cp4.1LG01g13440Cucurbita pepo (Zucchini)cpecpeB399