Cp4.1LG01g12970 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g12970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	cofactor assembly of complex C
Location	Cp4.1LG01 : 8533092 .. 8539045 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTGCTCGAGGCAGCGGATCGTTCCCCCCAGGTTGGAGTCCAAATCCCGGCAAATTATCCTTACGGACTTCATTCTTGAAGTAAGTATCATTTCACTCGGTTTCGATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAACGGATTGGGTGGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGGTTCGTTAAGTTCAATTAATCAATCGAATGCTGTTTATTTTCACCAGTCAATTTGTATTGCTTACTTGGATGGAAATTCCATCTTCGATAACTTCGTCGACAATGGCGTTTTCCTATTTTAGCGGCATGATTCTGCAACTATACTTCACGTAATTAGTTGCTCTATTTATAGTAATAAACTATTATCAATTTCGGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGTCTAGCCGTCACAAATGTCTTGACTGGTCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTATGGGTTTACGATAAGATTTCCATGCTCAACCTTTACTCTCTATCAGGAGATTCCTGTTCTATTCTTATTTTTTCCCCCACTTTCATTTTCCATATCAGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGTTATGGTAAATACTTTATATGATTTTCTTCTTTGGTAATTTGAAACTGTGAATATTATTAAGTATTGAAGCCGGTTAAGATCATTGAAAATCACTTTCGATAGGGGTGCTTTGTTTGTTTTGGTTAATGGATATTGATGAGTGAAACTTGATATCGTGCTTGAGAATTATGACTTCTTATCTATTAGTTTTCCTATTATCCTATGGAATTTTATAATCCATGTCATTTTGGTTACCCTCATTGTCACATGTTCATGGGAATGTCTAGTGACAGGGAAAGCTAACTTCGTATGCCAATATGTATCTGATAAACTACTTTAGGTATTTGAAGCTAAGGATTCTTAGAGGAAATAGGAAAAATCCTCGACTAGGGGATTAATGGCTACTTTTTGCTGCCTATTCTTAGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTATTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGATGGCGAACATGTTGAAGCTTGTAAACTGATGCAGGGATCGCTCTATAAGGGAATTCTCAAATCCCAAGCTCGTGAGTAATAAACGACTTGTGCACAGAGACCATCACACATGTACTACTTGATTGACGTGCAATTGTAAATATCTGTCACTATTCGTTTTTGAGAAACCATCTTTCCTATATTTGCAGAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTTGATATTAAGGGTTGTTGTTAGATTTGTTCGTTTTTCTCTTATCTCGGGAATAAATAACTGGTCGATAGTTTTCTACAGTGTTTCATTCTTTGGTATTTGTCACCATATAACTAGTAGACACATAAACTAATAAACTCTATGCATGACTGATTATGGTTTAGAGTGCAAATGAAGCTGAAGAATAATTGGGCTTTTAGTTATATATATAATTAGCTATTACGTTCCCACATATTCTCTTTCAGAAACTTGGGAATTCTTTTCCCTGCCTACTGTCTAAATAGGGACTCTTCTTCTTCACTGAAACCAGACTCTGCTACTTGGCAAAGTAGGAAACAATGTGATGAAACTTTTAATTTGATTTTTAACTTTTATGGTTCTACAATTAAATAGGATTTTACTCTTCGCCTGTTTACTAGAGCATCCTTGTTTGGAAGGCGGTGGTCAATTCAACGCCTGAAAACTTGGAAATTTGTTATAGAATCTAAGAGATTGTTGCTGGTCTGTCGTAGTGTTTCTAAAAAATAATTTTGTTATTGTGTACTTGAGTTCCCTTGCTCACCAGCCTGTATTGGTGAAGTAGTAGTTAATTTTTCTTAAATAAAAAAAGTGAAAGAGATTAACTAAAGATAATAAATCATGAAAACAAAGGATGGAAAAATAGCTTTATGAAAACAGTTAAATTGTGTTTTACTACCTTTCAATGCCGCCAGCATCTCTCTCTCCTATCGTTAGGTAGTCTTTGCTATTGTAATTCAATGAGGTAATTTCCGCCTTCAATCTCATCAGGATCACTGCATGTGTTTGGGGGATATTTAAAAGAATCCATTTTGACTCAGTTTGTACTGGTACATATCATACAAATGAATGCAGAACAACGTGAAATTGTAACTGTGTTTGTGCACTCTATATCTTACTTGTGTTAGATAGGCCGGTTTTCGAAGTAAATTGAAACCACTGCTTTCTAAGACAAACCTGCTATTCTAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGTACTCGTTCTTAAGCCTCTTGGCTCTTTCTTAATGAGACTCGTTAATATTCGTGGATTTTTTCTCTCAATGGGATACTTGTCAAAAATTGGTCCTGGATATTGTTCTACCTGTTAATCAGTGTGAATAAATAGAACTACATATCTGTTTGCCATGATCTCCAATTCCAGCTTCTCTACCTAGAACACTTCCCCTCGGCCATTGTACATAATTTCTGCATATTGATTGCGATGGTCTTTCTTTCTGTGGTATAATTACAATATCCAGCTTGAGAATTAAAATGTTCACAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGAAGTGTTGATGGACAACACAAAATGGTTATTAGATTGTACCTTTTATTTATTTCCAATGTTTTTAAACCGTTGGGGTGGAAGAGAAATAACATTGACGCCTGGAAAGGCAGGCAAAGCAACTCAACTAAGTAGTTGATTTATATGTATAGTCGATACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGATATATTCACTGATTGGTGGTAATGCCTGGTTCAGTCCTTTTTTTTTTTGTAATGCATTTTCTCTGTCTGTGGTAATGCTGACTGCATTTCTCTTAAGATGTGTGACATAGCAGACAGCAAATGTTATATTCAAATTTGAAGTATGAATCAGAAAGAATTTCATTCCAACGTCTGAAATTTGTAAGTTAAAAATCTGTAACGAAACCAGTATCATATCCATGGAGTAAAAAATTAATCGATGAACATTCTTTTTGTAGCAAAAAAACAAAAAATTCAATTGCTTGCTGTATGATTACTGTGTACAGGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGATCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAGCTACTCTTCTGAAAAATTTAGCTCTAAAAGTTTCCCACACTTGATACTTGTAATGGTTTATGACAGCATTGCTTTTTGGTACGTCAAAAAACCCAGATCCTCGTTTCAACCTAAAGTGATGAACGACATTGAGAAGTGTTGGGTCAAGCAAGTCTGGCCGGATAAACGATTTGTGCCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCCATTGTCACCCCCTGCGGTGGATATGATGTTAAACCCGATGGTCCGAAGCTATGGCAGGCCGTTCTAATCTCTGCAATGGTCGTTGAATTGGAGGTTGAAGCAGATGAGTTAGCAATGAGAGAATGAAGGGCATTGCGGCCGGCAGTATGGTATTCTTGCTGACGGCGATACTTTGAAGGAAAGTAGAAAAACTCATCAACATCAAAGAAACCGACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCTGCTTCTTGGGTTTTAATCCATGGCCAGGTCAGCCTACTGATATTATAGTTTTCCAGGTTGAGCTCTCTAACGACTTCTTCAATGTCATCATCACTATTGTTGTCGTAGATAAACCAGCGCCCTACTCCAAGCCAAGCGTGGTACATAATCCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCTTGATTTCTTTTCAGCTCATTCAGCTTGGAGTTGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGGTGGGCTTTCGTATTGACACTACCACGGCCCACAGTAACCCGAATTCCCTTTTCCTTGTCTAAAGTGCTCGACACACCAGCCGGCAAGGAGCACCTGATAATTTCTTGAGCTGCTGTTACTGCCTTTGTGGTAAGCACATAGTCTCCGTTATTGTTGGAATTTCTCAGTCTAAAGTGGCAGCTGAATTCGGTCGGATTTGATTCCTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACCACAACCGTATCACCGTCAATAGCTGCCTCATAAACCACCCTCTCCCACGAGGCAACTGGGTGCCTATTCCTGACCAACCAATGGTCATCAGCTTCCACGCCAACCCACCTCAAGTCCACGGCGGAGGCCGAATAATTCCGTGGCGGCAGTGGACATCTGGCAATTGATCGGAACTCATCGTACCTGTCCGTGGACAGAACTGACTGTTTGAGAGTCTCTTGTTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAATCCAATTTCTCATCTCGGCTAAATTCGCCAGTGACCATCAAAAGCAAGTGGTCTGGGAAAAGGACTCGTCTTTCGATTCTCAAAGGCGAATACTTACCGCTCAAAGAATTGTCAAGTGTAGACTTGCTGGCAGAGGTGGACAAGCGGGAGAGAGTGGTGGAAGAGACATCGAGAACTGGCCGGAAAGACGCCGCCGCAATCGAGAACCACCGACTTGAAGAGAGAAACAAGAGAAAAGCAAAAAAGGCAAGGCAAAGAAACAGAGATCTTCGAGTCAAAAACTGAACATGCGAACTCGACCTGCCAAAACGCTTCCTCTTCCGACGCTGCTGCTGTTCCCAATCCATTAATCAAAATTCACACCAAACCCAAATCAGAAAAAGGCTCACCACCAGCAGTGCAGATCCGGTCAGATGGAAGCAGAAGAGTGTTCGTCGATGGAGTCTTTCCGATAACCCGCCTGTCCGTTTGCCGGAGGTAACAAGAAGAAAGTGTAAACTCCAAAGAGCCAAAGCCTGTGCCTGTAATTACTGGGGAACGGAGTTTATTAGTTCAAATTGGGCTGTGATGATGTCGAAACTGCTTGTTGATTGCTCTCTGCCGGGAGGTGGAACTTTATTCACAAAGAGGAAGCGTGAAAGTCACTCACTCTATCTCTCTTGTCCTGCTCCTCTTGCCAGGCCGACCACACCAGACCAGACCCAGACCATCGATTTTCTTTTTACTTTTTCCAAACAAAATATTATGTTTTAAAGCTTTAAAAAATACCCCATTTTTTGTTCATAACAGAGTAAATACTCATTTTTTGTACAGACCCATTTCTCGGAACCTTCGAATTTATAGAAAAAAATAATAATTTA

mRNA sequence

TAGTGCTCGAGGCAGCGGATCGTTCCCCCCAGGTTGGAGTCCAAATCCCGGCAAATTATCCTTACGGACTTCATTCTTGAAGTAAGTATCATTTCACTCGGTTTCGATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAACGGATTGGGTGGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGTCTAGCCGTCACAAATGTCTTGACTGGTCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTATTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGATGGCGAACATGTTGAAGCTTGTAAACTGATGCAGGGATCGCTCTATAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGAAGTGTTGATGGACAACACAAAATGGTTATTAGATTGTACCTTTTATTTATTTCCAATGTTTTTAAACCGTTGGGGTGGAAGAGAAATAACATTGACGCCTGGAAAGGCAGGCAAAGCAACTCAACTAAGTAGTTGATTTATATGTATAGTCGATACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGATATATTCACTGATTGGTGGTAATGCCTGGTTCAGTCCTTTTTTTTTTTGTAATGCATTTTCTCTGTCTGTGGTAATGCTGACTGCATTTCTCTTAAGATGTGTGACATAGCAGACAGCAAATGTTATATTCAAATTTGAAGTATGAATCAGAAAGAATTTCATTCCAACGTCTGAAATTTGTAAGTTAAAAATCTGTAACGAAACCAGTATCATATCCATGGAGTAAAAAATTAATCGATGAACATTCTTTTTGTAGCAAAAAAACAAAAAATTCAATTGCTTGCTGTATGATTACTGTGTACAGGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGATCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAGCTACTCTTCTGAAAAATTTAGCTCTAAAAGTTTCCCACACTTGATACTTGTAATGGTTTATGACAGCATTGCTTTTTGGTACGTCAAAAAACCCAGATCCTCGTTTCAACCTAAAGTGATGAACGACATTGAGAAGTGTTGGGTCAAGCAAGTCTGGCCGGATAAACGATTTGTGCCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCCATTGTCACCCCCTGCGGTGGATATGATGTTAAACCCGATGGTCCGAAGCTATGGCAGGCCGTTCTAATCTCTGCAATGGTCGTTGAATTGGAGGTTGAAGCAGATGAGTTAGCAATGAGAGAATGAAGGGCATTGCGGCCGGCAGTATGGTATTCTTGCTGACGGCGATACTTTGAAGGAAAGTAGAAAAACTCATCAACATCAAAGAAACCGACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCTGCTTCTTGGGTTTTAATCCATGGCCAGGTCAGCCTACTGATATTATAGTTTTCCAGGTTGAGCTCTCTAACGACTTCTTCAATGTCATCATCACTATTGTTGTCGTAGATAAACCAGCGCCCTACTCCAAGCCAAGCGTGGTACATAATCCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCTTGATTTCTTTTCAGCTCATTCAGCTTGGAGTTGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGGTGGGCTTTCGTATTGACACTACCACGGCCCACAGTAACCCGAATTCCCTTTTCCTTGTCTAAAGTGCTCGACACACCAGCCGGCAAGGAGCACCTGATAATTTCTTGAGCTGCTGTTACTGCCTTTGTGGTAAGCACATAGTCTCCGTTATTGTTGGAATTTCTCAGTCTAAAGTGGCAGCTGAATTCGGTCGGATTTGATTCCTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACCACAACCGTATCACCGTCAATAGCTGCCTCATAAACCACCCTCTCCCACGAGGCAACTGGGTGCCTATTCCTGACCAACCAATGGTCATCAGCTTCCACGCCAACCCACCTCAAGTCCACGGCGGAGGCCGAATAATTCCGTGGCGGCAGTGGACATCTGGCAATTGATCGGAACTCATCGTACCTGTCCGTGGACAGAACTGACTGTTTGAGAGTCTCTTGTTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAATCCAATTTCTCATCTCGGCTAAATTCGCCAGTGACCATCAAAAGCAAGTGGTCTGGGAAAAGGACTCGTCTTTCGATTCTCAAAGGCGAATACTTACCGCTCAAAGAATTGTCAAGTGTAGACTTGCTGGCAGAGGTGGACAAGCGGGAGAGAGTGGTGGAAGAGACATCGAGAACTGGCCGGAAAGACGCCGCCGCAATCGAGAACCACCGACTTGAAGAGAGAAACAAGAGAAAAGCAAAAAAGGCAAGGCAAAGAAACAGAGATCTTCGAGTCAAAAACTGAACATGCGAACTCGACCTGCCAAAACGCTTCCTCTTCCGACGCTGCTGCTGTTCCCAATCCATTAATCAAAATTCACACCAAACCCAAATCAGAAAAAGGCTCACCACCAGCAGTGCAGATCCGGTCAGATGGAAGCAGAAGAGTGTTCGTCGATGGAGTCTTTCCGATAACCCGCCTGTCCGTTTGCCGGAGGTAACAAGAAGAAAGTGTAAACTCCAAAGAGCCAAAGCCTGTGCCTGTAATTACTGGGGAACGGAGTTTATTAGTTCAAATTGGGCTGTGATGATGTCGAAACTGCTTGTTGATTGCTCTCTGCCGGGAGGTGGAACTTTATTCACAAAGAGGAAGCGTGAAAGTCACTCACTCTATCTCTCTTGTCCTGCTCCTCTTGCCAGGCCGACCACACCAGACCAGACCCAGACCATCGATTTTCTTTTTACTTTTTCCAAACAAAATATTATGTTTTAAAGCTTTAAAAAATACCCCATTTTTTGTTCATAACAGAGTAAATACTCATTTTTTGTACAGACCCATTTCTCGGAACCTTCGAATTTATAGAAAAAAATAATAATTTA

Coding sequence (CDS)

ATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAACGGATTGGGTGGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGTCTAGCCGTCACAAATGTCTTGACTGGTCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTATTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGATGGCGAACATGTTGAAGCTTGTAAACTGATGCAGGGATCGCTCTATAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAGAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGA

Protein sequence

MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

Homology

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BLAST of Cp4.1LG01g12970 vs. Swiss-Prot
Match: CCB4_ARATH (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana GN=CCB4 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.2e-103
Identity = 196/288 (68.06%), Postives = 233/288 (80.90%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQA---SYRGPKPSTDWVAEW 60
           MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP  + VA++
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTG 120
           +SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+LTG
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMC 180
           LVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLVIVY+G+C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 IFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPS 240
           + Q+G  AES E D     V+  KLMQGS+Y+G++KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

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BLAST of Cp4.1LG01g12970 vs. TrEMBL
Match: A0A0A0KQF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603980 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 4.4e-141
Identity = 259/300 (86.33%), Postives = 274/300 (91.33%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60
           MEAGIFFP+T I W+ + K T   +R SFP I+RASS  SQ SYRGPKPST+ VA+WVS 
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRSLPIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDTVRSLPIYVGGISLLIVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180
           LSIRPKSITPVNP GVE ERICSSLPD VTSELLWVWKSLSEVTCCRSLV+VYDG CIFQ
Sbjct: 121 LSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGTCIFQ 180

Query: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEG+G+ EHVEA KLMQGSLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGNGEAEHVEAGKLMQGSLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWIS VGEKLDATL KYSNN QPAAKLSS+G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISFVGEKLDATLSKYSNNFQPAAKLSSKGN 300

[Close]

BLAST of Cp4.1LG01g12970 vs. TrEMBL
Match: D7TNJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01040 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-110
Identity = 209/294 (71.09%), Postives = 239/294 (81.29%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60
           MEAG     TPI W   L     P   +FPR +RASS  SQ  YRGPKP  DW+A+WVS 
Sbjct: 1   MEAGRLLR-TPIPWRPKL----APSPPTFPRFVRASS-KSQGRYRGPKPRRDWLADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRSLPIYVGG+SLL VLFNR +SGIAPVADASSSQSRADLLTLGLAVTN+L GLVW
Sbjct: 61  NDDTVRSLPIYVGGVSLLSVLFNRTISGIAPVADASSSQSRADLLTLGLAVTNILAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180
           LSIRPKSI+ VNPQGVE  RI  ++   + SELLWVW+SLS VTCCRSLVI+YD +CI Q
Sbjct: 121 LSIRPKSISVVNPQGVESRRIYPNIAASLVSELLWVWESLSVVTCCRSLVILYDSICILQ 180

Query: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           +G AAES+ GDG+   V+A KLMQGSLY+G++KS AQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 IGMAAESSAGDGEAMAVDATKLMQGSLYQGVMKSGAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAK 295
           AVILQP+G+KGI IIGG+TIRGFT SDQAWI+L+GEK+DA+L KY NNL  A +
Sbjct: 241 AVILQPIGDKGIIIIGGDTIRGFTASDQAWITLIGEKVDASLSKYVNNLPVAVQ 288

[Close]

BLAST of Cp4.1LG01g12970 vs. TrEMBL
Match: M5XEU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009381mg PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 9.9e-109
Identity = 207/292 (70.89%), Postives = 238/292 (81.51%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRR----SFPRIIRASSLNSQASYRGPKPSTDWVAE 60
           MEAG     +PI W+        P+RR    +FPR I A  LNS + YRGPKP  +WVA+
Sbjct: 1   MEAGSLLR-SPIPWTIKR-----PLRRRLGPTFPRPIMA--LNSDSRYRGPKPQRNWVAD 60

Query: 61  WVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLT 120
           WVS N+DAVRSLPIY GG SLL VLFNR VS IA VADASSSQSRADLLTLGLAVTN+L 
Sbjct: 61  WVSNNDDAVRSLPIYAGGASLLAVLFNRTVSDIALVADASSSQSRADLLTLGLAVTNILA 120

Query: 121 GLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGM 180
           GLVWLSIRPKSI+ VNP+G+ECER+ S+LP  + SELLW W+SLS+VTCCRSLVIVYDG 
Sbjct: 121 GLVWLSIRPKSISKVNPEGIECERMHSNLPHTLLSELLWAWESLSDVTCCRSLVIVYDGR 180

Query: 181 CIFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLP 240
           CI Q+GFAAES+ GDG    V+A KLMQGSLY+G++KS  QSYLANL LYPGKSELPFLP
Sbjct: 181 CILQIGFAAESSNGDGKAVSVDADKLMQGSLYRGVMKSGVQSYLANLYLYPGKSELPFLP 240

Query: 241 SNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN 289
           SNTQAVILQPLG+KGI IIGG+T+RGFT++DQAWISL+GEKLD+TL KY +N
Sbjct: 241 SNTQAVILQPLGDKGITIIGGDTVRGFTSADQAWISLIGEKLDSTLAKYVDN 284

[Close]

BLAST of Cp4.1LG01g12970 vs. TrEMBL
Match: A0A0D2QS13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G345900 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 206/291 (70.79%), Postives = 239/291 (82.13%), Query Frame = 1


Query: 1   MEAG--IFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWV 60
           MEAG  +   +  I W S       P   +FPR I ASS+  + SY+GPKP  DW+A+WV
Sbjct: 1   MEAGRILQIGIPWITWRSP------PRLPNFPRYICASSIQ-RGSYKGPKPGRDWIADWV 60

Query: 61  SKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGL 120
           SKN+DAVRS+PIYVGG SLL VLFNRA+SGIAPVADASSSQSRADLLTLGLAVTNVLTGL
Sbjct: 61  SKNDDAVRSMPIYVGGASLLAVLFNRAISGIAPVADASSSQSRADLLTLGLAVTNVLTGL 120

Query: 121 VWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCI 180
           VWLSIRPKSITPV PQGVEC+ I S LP+ V SE+LWVW+SLS VTCC+SLVIVYD  CI
Sbjct: 121 VWLSIRPKSITPVGPQGVECQEIYSHLPESVVSEILWVWESLSAVTCCKSLVIVYDCQCI 180

Query: 181 FQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSN 240
            Q+G AA+S   D +   V+A KLMQGSLY+G+LKS AQSY+ANLSLYPG+SELPFLPSN
Sbjct: 181 VQIGVAAKSLNID-EPFAVDAAKLMQGSLYQGVLKSGAQSYMANLSLYPGRSELPFLPSN 240

Query: 241 TQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNL 290
           TQAVILQPLG++GIA++GG+TIRGFTTSDQ WIS +GEKLDATL KY +++
Sbjct: 241 TQAVILQPLGDRGIAVLGGDTIRGFTTSDQTWISYIGEKLDATLAKYMSSM 283

[Close]

BLAST of Cp4.1LG01g12970 vs. TrEMBL
Match: V4TPK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032274mg PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 4.2e-107
Identity = 206/288 (71.53%), Postives = 232/288 (80.56%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRAS-SLNSQASYRGPKPSTDWVAEWVS 60
           MEAG  F  + I W         P   SFPR IRAS S  SQ  YRGPKPS D VA+WV 
Sbjct: 1   MEAGTIF-YSAIPWKPKQPFPRNP--SSFPRFIRASASSQSQGGYRGPKPSQDLVADWVM 60

Query: 61  KNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLV 120
            N+DAVRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL + LAVT++LTGLV
Sbjct: 61  NNDDAVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLAISLAVTSILTGLV 120

Query: 121 WLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIF 180
           WLSIRPKSIT VNP+GVEC+ ICS LPD V SELLW W+SLS VTCCRSLV+VYDG+C+ 
Sbjct: 121 WLSIRPKSITVVNPKGVECQMICSYLPDSVVSELLWAWESLSAVTCCRSLVVVYDGICLL 180

Query: 181 QVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNT 240
           Q+G AAES    G+   V+A KL QGS+Y G+++S+AQ YLANL LYPG+SELPFLPSNT
Sbjct: 181 QIGMAAESG-NSGEAVIVDASKLTQGSVYLGVMRSKAQRYLANLLLYPGRSELPFLPSNT 240

Query: 241 QAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSN 288
           QAVILQPLG+KGIAIIGG+TIRGFTTSDQ+WI+ +GEKLDATL KYSN
Sbjct: 241 QAVILQPLGDKGIAIIGGDTIRGFTTSDQSWIAFIGEKLDATLAKYSN 284

[Close]

BLAST of Cp4.1LG01g12970 vs. TAIR10
Match: AT1G59840.1 (AT1G59840.1 cofactor assembly of complex C)

HSP 1 Score: 375.6 bits (963), Expect = 2.9e-104
Identity = 196/288 (68.06%), Postives = 233/288 (80.90%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQA---SYRGPKPSTDWVAEW 60
           MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP  + VA++
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADF 60

Query: 61  VSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTG 120
           +SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLAVTN+LTG
Sbjct: 61  ISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTG 120

Query: 121 LVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMC 180
           LVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLVIVY+G+C
Sbjct: 121 LVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLVIVYNGIC 180

Query: 181 IFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPS 240
           + Q+G  AES E D     V+  KLMQGS+Y+G++KS+AQSYLANLSLYPG+SELPFLP+
Sbjct: 181 LIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRSELPFLPA 240

Query: 241 NTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY 286
           NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 NTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of Cp4.1LG01g12970 vs. NCBI nr
Match: gi|449434863|ref|XP_004135215.1| (PREDICTED: uncharacterized protein LOC101208049 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 6.3e-141
Identity = 259/300 (86.33%), Postives = 274/300 (91.33%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60
           MEAGIFFP+T I W+ + K T   +R SFP I+RASS  SQ SYRGPKPST+ VA+WVS 
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRSLPIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDTVRSLPIYVGGISLLIVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180
           LSIRPKSITPVNP GVE ERICSSLPD VTSELLWVWKSLSEVTCCRSLV+VYDG CIFQ
Sbjct: 121 LSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGTCIFQ 180

Query: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAESAEG+G+ EHVEA KLMQGSLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAESAEGNGEAEHVEAGKLMQGSLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAIIGGNTIRGFTTSDQAWIS VGEKLDATL KYSNN QPAAKLSS+G+
Sbjct: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISFVGEKLDATLSKYSNNFQPAAKLSSKGN 300

[Close]

BLAST of Cp4.1LG01g12970 vs. NCBI nr
Match: gi|659090927|ref|XP_008446278.1| (PREDICTED: uncharacterized protein LOC103489053 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 6.3e-141
Identity = 261/300 (87.00%), Postives = 272/300 (90.67%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60
           MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPSTD VA+WVS 
Sbjct: 1   MEAGIFFTVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVL GLVW
Sbjct: 61  NDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180
           LSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLV+VYDG CI Q
Sbjct: 121 LSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQ 180

Query: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           VGFAAE AEGDG+ E VEA KLMQG LYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 VGFAAELAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD 300
           AVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Sbjct: 241 AVILQPLGEKGIAIVGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNFQPAAKLSSNGN 300

[Close]

BLAST of Cp4.1LG01g12970 vs. NCBI nr
Match: gi|225424815|ref|XP_002267988.1| (PREDICTED: uncharacterized protein LOC100255235 [Vitis vinifera])

HSP 1 Score: 406.8 bits (1044), Expect = 3.4e-110
Identity = 209/294 (71.09%), Postives = 239/294 (81.29%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSTDWVAEWVSK 60
           MEAG     TPI W   L     P   +FPR +RASS  SQ  YRGPKP  DW+A+WVS 
Sbjct: 1   MEAGRLLR-TPIPWRPKL----APSPPTFPRFVRASS-KSQGRYRGPKPRRDWLADWVSN 60

Query: 61  NNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLTGLVW 120
           N+D VRSLPIYVGG+SLL VLFNR +SGIAPVADASSSQSRADLLTLGLAVTN+L GLVW
Sbjct: 61  NDDTVRSLPIYVGGVSLLSVLFNRTISGIAPVADASSSQSRADLLTLGLAVTNILAGLVW 120

Query: 121 LSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGMCIFQ 180
           LSIRPKSI+ VNPQGVE  RI  ++   + SELLWVW+SLS VTCCRSLVI+YD +CI Q
Sbjct: 121 LSIRPKSISVVNPQGVESRRIYPNIAASLVSELLWVWESLSVVTCCRSLVILYDSICILQ 180

Query: 181 VGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQ 240
           +G AAES+ GDG+   V+A KLMQGSLY+G++KS AQSYLANLSLYPGKSELPFLPSNTQ
Sbjct: 181 IGMAAESSAGDGEAMAVDATKLMQGSLYQGVMKSGAQSYLANLSLYPGKSELPFLPSNTQ 240

Query: 241 AVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAK 295
           AVILQP+G+KGI IIGG+TIRGFT SDQAWI+L+GEK+DA+L KY NNL  A +
Sbjct: 241 AVILQPIGDKGIIIIGGDTIRGFTASDQAWITLIGEKVDASLSKYVNNLPVAVQ 288

[Close]

BLAST of Cp4.1LG01g12970 vs. NCBI nr
Match: gi|645229482|ref|XP_008221487.1| (PREDICTED: uncharacterized protein LOC103321459 [Prunus mume])

HSP 1 Score: 403.7 bits (1036), Expect = 2.9e-109
Identity = 208/292 (71.23%), Postives = 239/292 (81.85%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRS----FPRIIRASSLNSQASYRGPKPSTDWVAE 60
           MEAG     +PI W+        P+RRS    FPR IRA  LNS + YRGPKP  +WVA+
Sbjct: 1   MEAGSLLR-SPIPWTPKR-----PLRRSLGLTFPRPIRA--LNSDSRYRGPKPQRNWVAD 60

Query: 61  WVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLT 120
           WVS N+DAVRSLPIY G  SLL VLFNR VS IA VADASSSQSRADLLTLGLAVTN+L 
Sbjct: 61  WVSNNDDAVRSLPIYAGSASLLAVLFNRTVSDIALVADASSSQSRADLLTLGLAVTNILA 120

Query: 121 GLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGM 180
           GLVWLSIRPKSI+ VNP+G+ECER+ S+LP+ + SELLW W+SLS+VTCCRSLVIVYDG 
Sbjct: 121 GLVWLSIRPKSISKVNPEGIECERMHSNLPNTLLSELLWAWESLSDVTCCRSLVIVYDGR 180

Query: 181 CIFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLP 240
           CI Q+GFAAES+ GDG    V+A KLMQGSLY+G++KS  QSYLANL LYPGKSELPFLP
Sbjct: 181 CILQIGFAAESSNGDGKAVSVDADKLMQGSLYRGVMKSGVQSYLANLYLYPGKSELPFLP 240

Query: 241 SNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN 289
           SNTQAVILQPLG+KGI IIGG+T+RGFT++DQAWISL+GEKLD+TL KY +N
Sbjct: 241 SNTQAVILQPLGDKGITIIGGDTVRGFTSADQAWISLIGEKLDSTLAKYVDN 284

[Close]

BLAST of Cp4.1LG01g12970 vs. NCBI nr
Match: gi|596178518|ref|XP_007223250.1| (hypothetical protein PRUPE_ppa009381mg [Prunus persica])

HSP 1 Score: 401.4 bits (1030), Expect = 1.4e-108
Identity = 207/292 (70.89%), Postives = 238/292 (81.51%), Query Frame = 1


Query: 1   MEAGIFFPVTPILWSSSLKCTLCPVRR----SFPRIIRASSLNSQASYRGPKPSTDWVAE 60
           MEAG     +PI W+        P+RR    +FPR I A  LNS + YRGPKP  +WVA+
Sbjct: 1   MEAGSLLR-SPIPWTIKR-----PLRRRLGPTFPRPIMA--LNSDSRYRGPKPQRNWVAD 60

Query: 61  WVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLT 120
           WVS N+DAVRSLPIY GG SLL VLFNR VS IA VADASSSQSRADLLTLGLAVTN+L 
Sbjct: 61  WVSNNDDAVRSLPIYAGGASLLAVLFNRTVSDIALVADASSSQSRADLLTLGLAVTNILA 120

Query: 121 GLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVIVYDGM 180
           GLVWLSIRPKSI+ VNP+G+ECER+ S+LP  + SELLW W+SLS+VTCCRSLVIVYDG 
Sbjct: 121 GLVWLSIRPKSISKVNPEGIECERMHSNLPHTLLSELLWAWESLSDVTCCRSLVIVYDGR 180

Query: 181 CIFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKSELPFLP 240
           CI Q+GFAAES+ GDG    V+A KLMQGSLY+G++KS  QSYLANL LYPGKSELPFLP
Sbjct: 181 CILQIGFAAESSNGDGKAVSVDADKLMQGSLYRGVMKSGVQSYLANLYLYPGKSELPFLP 240

Query: 241 SNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN 289
           SNTQAVILQPLG+KGI IIGG+T+RGFT++DQAWISL+GEKLD+TL KY +N
Sbjct: 241 SNTQAVILQPLGDKGITIIGGDTVRGFTSADQAWISLIGEKLDSTLAKYVDN 284

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCB4_ARATH	5.2e-103	68.06	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidop...	[more]

BLAST of Cp4.1LG01g12970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQF1_CUCSA	4.4e-141	86.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603980 PE=4 SV=1	[more]
D7TNJ2_VITVI	2.4e-110	71.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01040 PE=4 SV=...	[more]
M5XEU1_PRUPE	9.9e-109	70.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009381mg PE=4 SV=1	[more]
A0A0D2QS13_GOSRA	1.1e-107	70.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G345900 PE=4 SV=1	[more]
V4TPK0_9ROSI	4.2e-107	71.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032274mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G59840.1	2.9e-104	68.06	cofactor assembly of complex C	[more]

BLAST of Cp4.1LG01g12970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434863\|ref\|XP_004135215.1\|	6.3e-141	86.33	PREDICTED: uncharacterized protein LOC101208049 [Cucumis sativus]	[more]
gi\|659090927\|ref\|XP_008446278.1\|	6.3e-141	87.00	PREDICTED: uncharacterized protein LOC103489053 [Cucumis melo]	[more]
gi\|225424815\|ref\|XP_002267988.1\|	3.4e-110	71.09	PREDICTED: uncharacterized protein LOC100255235 [Vitis vinifera]	[more]
gi\|645229482\|ref\|XP_008221487.1\|	2.9e-109	71.23	PREDICTED: uncharacterized protein LOC103321459 [Prunus mume]	[more]
gi\|596178518\|ref\|XP_007223250.1\|	1.4e-108	70.89	hypothetical protein PRUPE_ppa009381mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021325	CCB2/CCB4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12970.1	Cp4.1LG01g12970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	DUF2930	coord: 68..278 score: 2.1
None	No IPR available	PANTHER	PTHR34943	FAMILY NOT NAMED	coord: 24..297 score: 1.5E
None	No IPR available	PANTHER	PTHR34943:SF2	SUBFAMILY NOT NAMED	coord: 24..297 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g12970	CmaCh04G016070	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g12970	CmoCh04G016840	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g12970	Csa5G603980	Cucumber (Chinese Long) v2	cpecuB416
Cp4.1LG01g12970	CSPI05G23130	Wild cucumber (PI 183967)	cpecpiB415
Cp4.1LG01g12970	CsaV3_5G032010	Cucumber (Chinese Long) v3	cpecucB0518
Cp4.1LG01g12970	CsGy5G022600	Cucumber (Gy14) v2	cgybcpeB626

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g12970	Melon (DHL92) v3.5.1	cpemeB377
Cp4.1LG01g12970	Cucumber (Gy14) v2	cgybcpeB061
Cp4.1LG01g12970	Melon (DHL92) v3.6.1	cpemedB437
Cp4.1LG01g12970	Melon (DHL92) v3.6.1	cpemedB459
Cp4.1LG01g12970	Silver-seed gourd	carcpeB0528
Cp4.1LG01g12970	Silver-seed gourd	carcpeB1177
Cp4.1LG01g12970	Cucumber (Chinese Long) v3	cpecucB0470
Cp4.1LG01g12970	Wax gourd	cpewgoB0568
Cp4.1LG01g12970	Cucurbita pepo (Zucchini)	cpecpeB346
Cp4.1LG01g12970	Cucurbita pepo (Zucchini)	cpecpeB375
Cp4.1LG01g12970	Cucumber (Gy14) v1	cgycpeB0754
Cp4.1LG01g12970	Cucurbita maxima (Rimu)	cmacpeB726
Cp4.1LG01g12970	Cucurbita moschata (Rifu)	cmocpeB678
Cp4.1LG01g12970	Bottle gourd (USVL1VR-Ls)	cpelsiB360
Cp4.1LG01g12970	Watermelon (Charleston Gray)	cpewcgB393
Cp4.1LG01g12970	Watermelon (97103) v1	cpewmB432
Cp4.1LG01g12970	Watermelon (97103) v1	cpewmB444