Cp4.1LG01g12870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g12870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb-like transcription factor family protein
LocationCp4.1LG01 : 8542296 .. 8543956 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCACCATAGAGAAATGGAATAAAGAAAGGGCCTTGAAAGAATGGTGGCTAACTCGGCTTGTATATGAACCCAAAGAAGTTGGCTTTTTAGCTTTTCCGATCCACTTTTTCGCCTTTTGGTTTCTTCCACTTCCAGATTCCCGTGCTTTCTCTTGTCAGACCCTTTTTATTGTTTTCTTACCCTTCTCCCTGCAGCCTTTACTTTAGACTCGACATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGTTTTTTTTTTTTTTTTTTTAATTTTATTTTACTTATTTAATTTTGATTTTGATTTTTGTAGCTAATTTGGATGTGGGTTTGATTTTTCATAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTGTAAGTCCCTTGTCTTGTTCAGAATCCTGTTTGTTTGTTAATTTGATTGATTTATTATTATTATTATTATTTCCATTTAATTTGAATTGAAGTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGAAGCTGATCCTGAATTGTTGGGGGCTTAGATATAAGAATAACTGGTCGGATTTAATTGGACAGCGTATAAAAAAGGATTCCAGGTTTGTTTTGTACAGGTGAAATTTTAAATTTAATTGGTCCAAAAAAAGTGATATAAATTTCAATAATGGTTGTATTTGGATTTGTTTTTAGAATCGTTGTGTTAATGTTCATATAATTTAATTTTATTGTAGAAATGAATTAATGCGTTAATTTTCAGCATAACTCGAAATATTTAGAGCATATGGTTCAGTAAGTTAGTAGACGACAAGAATATGAGTGTGGGCATCAAGCTATTGCTTTCTCGACTTGTCGTTTTGCTTCCATGTGCCCATGGATGAATC

mRNA sequence

GCTCACCATAGAGAAATGGAATAAAGAAAGGGCCTTGAAAGAATGGTGGCTAACTCGGCTTGTATATGAACCCAAAGAAGTTGGCTTTTTAGCTTTTCCGATCCACTTTTTCGCCTTTTGGTTTCTTCCACTTCCAGATTCCCGTGCTTTCTCTTGTCAGACCCTTTTTATTGTTTTCTTACCCTTCTCCCTGCAGCCTTTACTTTAGACTCGACATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGAAGCTGATCCTGAATTGTTGGGGGCTTAGATATAAGAATAACTGGTCGGATTTAATTGGACAGCGTATAAAAAAGGATTCCAGGTTTGTTTTGTACAGGTGAAATTTTAAATTTAATTGGTCCAAAAAAAGTGATATAAATTTCAATAATGGTTGTATTTGGATTTGTTTTTAGAATCGTTGTGTTAATGTTCATATAATTTAATTTTATTGTAGAAATGAATTAATGCGTTAATTTTCAGCATAACTCGAAATATTTAGAGCATATGGTTCAGTAAGTTAGTAGACGACAAGAATATGAGTGTGGGCATCAAGCTATTGCTTTCTCGACTTGTCGTTTTGCTTCCATGTGCCCATGGATGAATC

Coding sequence (CDS)

ATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGA

Protein sequence

MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA
Homology
[Close]
BLAST of Cp4.1LG01g12870 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.4e-49
Identity = 136/304 (44.74%), Postives = 173/304 (56.91%), Query Frame = 1 

Query: 17  SRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPLSQDSNNA--- 76
           S + P   GGG  G    MLFGVR+         RKSVS+N+LSQ++ P + ++NN    
Sbjct: 9   SSSTPAVTGGGFGGE--IMLFGVRVKV----DPMRKSVSLNDLSQYEHPNANNNNNGGDN 68

Query: 77  --------DAGYASDD--VVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISR 136
                   D GYAS D  V H S+  R RKRG+PWTEEEH+LFLLGLQKVGKGDWRGISR
Sbjct: 69  NESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISR 128

Query: 137 NFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEALP 196
           NFVKTRTPTQVASHAQKYFLRR+N NRRRRRSSLFDITTD+     +E+       + +P
Sbjct: 129 NFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEE---VENKQEIP 188

Query: 197 PPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAE--------NTISSKILRPIPMLP 256
              P + P            + P+  + P   D + E        +  SS ++ P+PM  
Sbjct: 189 VVAPATLPTTKTNAFPVAPTVGPI--IFPVQIDKSREYPTLLRHDHGNSSMLVGPVPMFS 248

Query: 257 LSPYPKFA-QLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDI 299
           + P P  A  LN N  +  +P  L+L+LS S  + Q   A+S   S +  MS   +   I
Sbjct: 249 M-PNPSTAIDLNANHNSTIEPSSLSLRLSLSLDQGQ---ASSTRHSAYNVMSSFSNGESI 297

[Close]
BLAST of Cp4.1LG01g12870 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-24
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 1 

Query: 90  RSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFN 149
           + RK+G+PWTEEEH+LFL+GL+K GKGDWR ISRNFV TRTPTQVASHAQKYF+R+ +  
Sbjct: 126 QERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGG 185

Query: 150 RRRRRSSLFDITTDTFPSSSMEDDLVFSGHEALPPPLP 188
           + +RR+S+ DITT      ++ D+   S     PP  P
Sbjct: 186 KDKRRASIHDITT-----VNLSDNQTPSPDNKKPPSSP 218

[Close]
BLAST of Cp4.1LG01g12870 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 48/125 (38.40%), Postives = 70/125 (56.00%), Query Frame = 1 

Query: 53  SVSMNNLSQFDQPLSQDSNNAD-----AGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFL 112
           S S NN +  +   + ++NN       A   S    +P+ +  S K+G  WT+EEH  FL
Sbjct: 331 SNSNNNNNNNNNNNNNNTNNTTTTTTTATTTSGGKTNPTGKKTSLKQG--WTKEEHIRFL 390

Query: 113 LGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR---SSLFDITTDT 170
            G+Q  GKG W+ I++ FV TRTPTQ+ SHAQKY+LR+    + +R     SL D+  D 
Sbjct: 391 NGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKRSIHDLSLQDLIDDN 450

[Close]
BLAST of Cp4.1LG01g12870 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.1e-07
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 1 

Query: 92  RKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRR 151
           +K+   WT EEH  F+  L K G  D + IS+ +V TR PTQV +HAQKYFLR +    R
Sbjct: 169 KKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERGR 228

Query: 152 RRRS 156
           +  S
Sbjct: 229 KLES 231

[Close]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match: A0A0A0KQE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604000 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-125
Identity = 246/318 (77.36%), Postives = 259/318 (81.45%), Query Frame = 1 

Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTT-EGSSSFRKSVSMNNL 60
           MN  RTCSLCGNNGHNSRTCPE DG       GFMLFGVRLTTT +GS+SFRKS SMNNL
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TTGFMLFGVRLTTTSDGSNSFRKSFSMNNL 60

Query: 61  SQF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDW 120
           SQ+ D P SQDSN+ADAGYASDDVVHPSDR   RKRGIPWTEEEHRLFLLGLQKVGKGDW
Sbjct: 61  SQYADHPPSQDSNHADAGYASDDVVHPSDRSGGRKRGIPWTEEEHRLFLLGLQKVGKGDW 120

Query: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSG 180
           RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS EDDL+FSG
Sbjct: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKEDDLIFSG 180

Query: 181 HEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG------DDNNAENTI--------- 240
           HEA  PPLPPS P KDN PGNF +KIH  KP PPA       D    E+T+         
Sbjct: 181 HEATQPPLPPSTPQKDNTPGNFSVKIHQAKP-PPAAVASGVVDSKAVESTLTLNSSNYPA 240

Query: 241 ---SSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSS 299
              +SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTS  E QSP AASQSS 
Sbjct: 241 KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSQSEGQSPAAASQSSG 300

[Close]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match: A0A061E7E9_THECC (Myb-like transcription factor family protein OS=Theobroma cacao GN=TCM_010118 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.9e-89
Identity = 198/307 (64.50%), Postives = 224/307 (72.96%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQ 64
           R+CS CGNNGHNSRTC E  GGG  G  G MLFGVR+T  EGS  FRKSVSMNNLSQFDQ
Sbjct: 3   RSCSQCGNNGHNSRTCGEVAGGGGGGENGIMLFGVRVT--EGS--FRKSVSMNNLSQFDQ 62

Query: 65  PLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRN 124
           P  QDS NADAGYASDDVVH S R R RKRG+PWTEEEHRLFLLGLQKVGKGDWRGISRN
Sbjct: 63  P--QDS-NADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRN 122

Query: 125 FVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSS-MEDDLVFSGHEALP 184
           FVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+F +S+ +E+D V   + +LP
Sbjct: 123 FVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDSFMNSTILEEDQVHQENVSLP 182

Query: 185 PPLPPSQ---PLKDNKPGNFLLKIHPVKPLPPAGDDNNAEN---------TISSKILRPI 244
            PLP SQ    +       F + + PV  LP AG++N+ EN           S K++RPI
Sbjct: 183 LPLPQSQAQAQMSRFPMSTFPVTLSPV-VLPVAGENNSMENLTLGTSPNANTSPKLIRPI 242

Query: 245 PMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDS 299
           P+LP+ P  K A LN+  + P DPLPL+LKLST   + QS  AA+  SS FQ MS  GDS
Sbjct: 243 PILPVPPSSKMADLNLKQKIPVDPLPLSLKLSTPSADEQSTAAAAAHSSTFQAMS-SGDS 300

[Close]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match: A0A067GVG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.0e-81
Identity = 191/317 (60.25%), Postives = 221/317 (69.72%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAG----GFMLFGVRLTTTEGSSSFRKSVSMNNLS 64
           R+CS CGNNGHNSRTC E  GGG+SGAG    G MLFGVR+T  EGSSSFRKS+SM+NLS
Sbjct: 3   RSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENGIMLFGVRVT--EGSSSFRKSISMDNLS 62

Query: 65  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 124
           QFDQP  QDS NADAGYASDD+VH S R R RKRG+PWTE+EHRLFLLGLQKVGKGDWRG
Sbjct: 63  QFDQP--QDS-NADAGYASDDIVHASGRSRERKRGVPWTEDEHRLFLLGLQKVGKGDWRG 122

Query: 125 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDIT---TDTFPSSSMEDDLVFS 184
           ISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT   TDTF  S+ME++    
Sbjct: 123 ISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTFMGSTMEEEQA-R 182

Query: 185 GHEALPPPLPPSQPLKDNKPGNFLLKIHPVK----PLPPAGDDNNAENTI--------SS 244
             E +  PLP  QP  +  PG F +  +PVK     LP  G+ +    TI        S 
Sbjct: 183 HQETITVPLP--QPQLNRHPGGFPVSAYPVKHSAVVLPFTGEKSMGNLTIGPSNKPRTSP 242

Query: 245 KILRPIPMLPLSPYPKFAQLNINDRTPE---DPLPLTLKLSTSHPEAQSPTAAS-QSSSN 299
           K++RPIP+ P+ P  K   LN+N +      D LPL+LKLST    +   +A +  SS+ 
Sbjct: 243 KLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAA 302

[Close]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match: B9HLU9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s19610g PE=4 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 6.6e-81
Identity = 187/317 (58.99%), Postives = 215/317 (67.82%), Query Frame = 1 

Query: 4   PRTCSLCGNNGHNSRTCPEGDGGG-ASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQF 63
           PR+CS CGNNGHNSRTC E   GG  S + G MLFGVR+T  E ++SFRKS SMNNLSQ+
Sbjct: 3   PRSCSQCGNNGHNSRTCGESPAGGDQSSSTGIMLFGVRVT--EVAASFRKSYSMNNLSQY 62

Query: 64  D-QPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGI 123
           D QP  + + +  AGY SDDVVH S R R RKRG+PWTEEEH+LFLLGLQKVGKGDWRGI
Sbjct: 63  DEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGI 122

Query: 124 SRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEA 183
           SRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTDTF  SSME+D V    E 
Sbjct: 123 SRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDTFMGSSMEEDQVH--QET 182

Query: 184 LPPPLP-----PSQPLKDNKPGNFLLKIHPVKPL----PPAGDDNNAE---------NTI 243
             P LP     P   L +N+PG F +   PV  +     P   DN  E         N  
Sbjct: 183 ATPALPQLQLQPRPCLNNNRPGGFPMSTFPVTVISPVTSPVSGDNPLEKLTSGQTNVNKK 242

Query: 244 SSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLP-LTLKLST-SHPEAQSPTAASQSSSN 299
           SSK++RP+P++P+ P  K A LN+N ++PED  P L+LKLST S  E Q    AS  SS 
Sbjct: 243 SSKLVRPVPIVPIPPSSKMADLNLNQKSPEDQFPALSLKLSTPSSEEQQQSPPASTHSST 302

[Close]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match: A9PGA2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.6e-81
Identity = 186/317 (58.68%), Postives = 215/317 (67.82%), Query Frame = 1 

Query: 4   PRTCSLCGNNGHNSRTCPEGDGGG-ASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQF 63
           PR+CS CGNNGHNSRTC E   GG  S + G MLFGVR+T  E ++SFRKS SMNNLSQ+
Sbjct: 3   PRSCSQCGNNGHNSRTCGESPAGGDQSSSTGIMLFGVRVT--EVAASFRKSYSMNNLSQY 62

Query: 64  D-QPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGI 123
           D QP  + + +  AGY SDDVVH S R R RKRG+PWTEEEH+LFLLGLQK+GKGDWRGI
Sbjct: 63  DEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKIGKGDWRGI 122

Query: 124 SRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEA 183
           SRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTDTF  SSME+D V    E 
Sbjct: 123 SRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDTFMGSSMEEDQVH--QET 182

Query: 184 LPPPLP-----PSQPLKDNKPGNFLLKIHPVKPL----PPAGDDNNAE---------NTI 243
             P LP     P   L +N+PG F +   PV  +     P   DN  E         N  
Sbjct: 183 ATPALPQLQLQPRPCLNNNRPGGFPMSTFPVTAISPVTSPVSGDNPLEKLTSGQTNVNKK 242

Query: 244 SSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLP-LTLKLST-SHPEAQSPTAASQSSSN 299
           SSK++RP+P++P+ P  K A LN+N ++PED  P L+LKLST S  E Q    AS  SS 
Sbjct: 243 SSKLVRPVPIVPIPPSSKMADLNLNQKSPEDQFPALSLKLSTPSSEEQQQSPPASTHSST 302

[Close]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 133/203 (65.52%), Postives = 146/203 (71.92%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCP--------EGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSM 64
           R+CS CGNNGHNSRTCP          D GG  G    MLFGVR+T    SS FRKSVSM
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGG--GEKAIMLFGVRVTEAS-SSCFRKSVSM 62

Query: 65  NNLSQFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKG 124
           NNLSQFDQ    +  + D GYASDDVVH S R R RKRG PWTEEEHRLFL GL KVGKG
Sbjct: 63  NNLSQFDQTPDPNPTD-DGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKG 122

Query: 125 DWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVF 184
           DWRGISRNFVKTRTPTQVASHAQKYFLRR N NRRRRRSSLFDIT D+F  SS E++ + 
Sbjct: 123 DWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEENQLQ 182

Query: 185 SGHEALPP-----PLPPSQPLKD 195
           +  E + P     P+PPS+ + D
Sbjct: 183 TPLELIRPVPIPIPIPPSRKMAD 201

[Close]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match: AT1G74840.1 (AT1G74840.1 Homeodomain-like superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-43
Identity = 113/244 (46.31%), Postives = 137/244 (56.15%), Query Frame = 1 

Query: 35  MLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPLS-----------QDSNNADAGYASDDVV 94
           MLFGVR+         RK VS+NNLS ++Q              QD N   AGYAS D  
Sbjct: 25  MLFGVRVVL----DPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEA 84

Query: 95  HPSDRCRS---RKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQK 154
            P         RKRG+PWTEEEH+LFLLGLQ+VGKGDW+GISRNFVKTRT TQVASHAQK
Sbjct: 85  LPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQK 144

Query: 155 YFLRRNNFNRRRRRSSLFDITTDT-FPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGN 214
           YFLRR+N NRRRRRSSLFD+TTDT  P       L+         P+P        +  N
Sbjct: 145 YFLRRSNLNRRRRRSSLFDMTTDTVIPMEEDHQVLIQENTSQSSSPVP--------EINN 204

Query: 215 FLLKIHPVKPL-----PPAGDDNNAENTISSKILRPIPM------LPLSPYPKFAQLNIN 253
           F   IHPV  +      P G+ +  + T SS ++  +P+       PLS     A  N+N
Sbjct: 205 F--SIHPVMQVFPEFPVPTGNQSYGQLT-SSNLINLVPLTFQSSPAPLSLNLSLASSNLN 253

[Close]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-43
Identity = 109/229 (47.60%), Postives = 127/229 (55.46%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCPE-------GDGGGASGAGG--------FMLFGVRLTTTEGSSS 64
           R CS C NNGHNSRTCP        G GGG  G GG          LFGVRLT     S 
Sbjct: 3   RRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTD---GSI 62

Query: 65  FRKSVSMNNLSQF------------------------DQPLSQDSNNADA----GYASDD 124
            +KS SM NLS                          D PLS  +  ++     GY SDD
Sbjct: 63  IKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDD 122

Query: 125 VVH---PSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHA 184
             H    S R   RKRG+PWTEEEHRLFL+GLQK+GKGDWRGISRN+V +RTPTQVASHA
Sbjct: 123 PAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHA 182

Query: 185 QKYFLRRNNFNRRRRRSSLFDITTDTF--PSSSMEDDLVFSGHEALPPP 186
           QKYF+R  + +RR+RRSSLFD+ TD     SS  +++   +G      P
Sbjct: 183 QKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEP 228

[Close]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match: AT1G19000.1 (AT1G19000.1 Homeodomain-like superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 116/304 (38.16%), Postives = 151/304 (49.67%), Query Frame = 1 

Query: 17  SRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPL---------- 76
           S +   GD G        MLFGVR+         RK VS+NNLS +++            
Sbjct: 5   SSSSETGDCGVTGKRDEIMLFGVRVVV----DPMRKCVSLNNLSDYEKSSPEDEIPKIVT 64

Query: 77  -----SQDSNNADA------GYAS-DDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVG 136
                 +D N  DA      GYAS +D V  S     RKRG+PWTE EH+ FL+GLQKVG
Sbjct: 65  AGAGDGEDKNETDATVIVADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVG 124

Query: 137 KGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDL 196
           KGDW+GISRNFVK+RTPTQVASHAQKYFLRR N NRRRRRSSLFDITT+T    +ME D 
Sbjct: 125 KGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQD- 184

Query: 197 VFSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPML 256
                     P   + PL +    +    +     +P   ++      ++   L P+   
Sbjct: 185 ----------PTQENSPLPETNISSGQQAMQVFTDVPTKTENAPETFHLNDPYLVPVTFQ 244

Query: 257 PLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDI 299
                   A+   N  T   PL L L L++S    + P +   + +   + S G  +  I
Sbjct: 245 --------AKPTFNLNTDAAPLSLNLCLASSFNLNEQPNSRHSAFTMMPSFSDGDSNSSI 285

[Close]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36
Identity = 88/171 (51.46%), Postives = 104/171 (60.82%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCP------------EGDGGGASGAGGFMLFGVRLTTTEGSSSFRK 64
           R CS C +NGHNSRTCP            EG    ++  G        L+   GS S   
Sbjct: 3   RRCSHCNHNGHNSRTCPNRGVKLFGVRLTEGSIRKSASMGN-------LSHYTGSGSGGH 62

Query: 65  SVSMNNLSQFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQK 124
               N       P     + A  GYAS+D V  S   R RK+G PWTEEEHR+FLLGLQK
Sbjct: 63  GTGSNTPGS---PGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLLGLQK 122

Query: 125 VGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTD 164
           +GKGDWRGISRN+V TRTPTQVASHAQKYF+R++N +RR+RRSSLFD+  D
Sbjct: 123 LGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPD 163

[Close]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: gi|449434861|ref|XP_004135214.1| (PREDICTED: transcription factor MYB1R1 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.2e-125
Identity = 246/318 (77.36%), Postives = 259/318 (81.45%), Query Frame = 1 

Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTT-EGSSSFRKSVSMNNL 60
           MN  RTCSLCGNNGHNSRTCPE DG       GFMLFGVRLTTT +GS+SFRKS SMNNL
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TTGFMLFGVRLTTTSDGSNSFRKSFSMNNL 60

Query: 61  SQF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDW 120
           SQ+ D P SQDSN+ADAGYASDDVVHPSDR   RKRGIPWTEEEHRLFLLGLQKVGKGDW
Sbjct: 61  SQYADHPPSQDSNHADAGYASDDVVHPSDRSGGRKRGIPWTEEEHRLFLLGLQKVGKGDW 120

Query: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSG 180
           RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS EDDL+FSG
Sbjct: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKEDDLIFSG 180

Query: 181 HEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG------DDNNAENTI--------- 240
           HEA  PPLPPS P KDN PGNF +KIH  KP PPA       D    E+T+         
Sbjct: 181 HEATQPPLPPSTPQKDNTPGNFSVKIHQAKP-PPAAVASGVVDSKAVESTLTLNSSNYPA 240

Query: 241 ---SSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSS 299
              +SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTS  E QSP AASQSS 
Sbjct: 241 KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSQSEGQSPAAASQSSG 300

[Close]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: gi|659090931|ref|XP_008446280.1| (PREDICTED: transcription factor MYB1R1 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 240/317 (75.71%), Postives = 252/317 (79.50%), Query Frame = 1 

Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MN  RTCSLCGNNGHNSRTCPE DG      GGFMLFGVRLTT+EGS+SFRKSVSMNNLS
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TGGFMLFGVRLTTSEGSNSFRKSVSMNNLS 60

Query: 61  QF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120
           Q+ + P  QDSN+ADAGYASDDVVHPSDRC  RKRGIPWTEEEHRLFLLGLQKVGKGDWR
Sbjct: 61  QYAEHPPIQDSNHADAGYASDDVVHPSDRCGGRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120

Query: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGH 180
           GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS ED       
Sbjct: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKED------- 180

Query: 181 EALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPA------------------GDDNNAEN 240
           EA+ PPLPPS P KDN PGNF +KIH  KP PPA                     N    
Sbjct: 181 EAMQPPLPPSPPQKDNTPGNFSVKIHAAKP-PPASVVSGVVDSKAVVSTLTLNSSNYRGK 240

Query: 241 TISSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSN 299
             +SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTSH E QSP AASQSS +
Sbjct: 241 PCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSHSEGQSPAAASQSSGS 300

[Close]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: gi|590693842|ref|XP_007044445.1| (Myb-like transcription factor family protein [Theobroma cacao])

HSP 1 Score: 336.3 bits (861), Expect = 5.6e-89
Identity = 198/307 (64.50%), Postives = 224/307 (72.96%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQ 64
           R+CS CGNNGHNSRTC E  GGG  G  G MLFGVR+T  EGS  FRKSVSMNNLSQFDQ
Sbjct: 3   RSCSQCGNNGHNSRTCGEVAGGGGGGENGIMLFGVRVT--EGS--FRKSVSMNNLSQFDQ 62

Query: 65  PLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRN 124
           P  QDS NADAGYASDDVVH S R R RKRG+PWTEEEHRLFLLGLQKVGKGDWRGISRN
Sbjct: 63  P--QDS-NADAGYASDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRN 122

Query: 125 FVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSS-MEDDLVFSGHEALP 184
           FVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+F +S+ +E+D V   + +LP
Sbjct: 123 FVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDSFMNSTILEEDQVHQENVSLP 182

Query: 185 PPLPPSQ---PLKDNKPGNFLLKIHPVKPLPPAGDDNNAEN---------TISSKILRPI 244
            PLP SQ    +       F + + PV  LP AG++N+ EN           S K++RPI
Sbjct: 183 LPLPQSQAQAQMSRFPMSTFPVTLSPV-VLPVAGENNSMENLTLGTSPNANTSPKLIRPI 242

Query: 245 PMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDS 299
           P+LP+ P  K A LN+  + P DPLPL+LKLST   + QS  AA+  SS FQ MS  GDS
Sbjct: 243 PILPVPPSSKMADLNLKQKIPVDPLPLSLKLSTPSADEQSTAAAAAHSSTFQAMS-SGDS 300

[Close]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: gi|641863979|gb|KDO82665.1| (hypothetical protein CISIN_1g021351mg [Citrus sinensis])

HSP 1 Score: 310.1 bits (793), Expect = 4.3e-81
Identity = 191/317 (60.25%), Postives = 221/317 (69.72%), Query Frame = 1 

Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAG----GFMLFGVRLTTTEGSSSFRKSVSMNNLS 64
           R+CS CGNNGHNSRTC E  GGG+SGAG    G MLFGVR+T  EGSSSFRKS+SM+NLS
Sbjct: 3   RSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENGIMLFGVRVT--EGSSSFRKSISMDNLS 62

Query: 65  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 124
           QFDQP  QDS NADAGYASDD+VH S R R RKRG+PWTE+EHRLFLLGLQKVGKGDWRG
Sbjct: 63  QFDQP--QDS-NADAGYASDDIVHASGRSRERKRGVPWTEDEHRLFLLGLQKVGKGDWRG 122

Query: 125 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDIT---TDTFPSSSMEDDLVFS 184
           ISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT   TDTF  S+ME++    
Sbjct: 123 ISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTFMGSTMEEEQA-R 182

Query: 185 GHEALPPPLPPSQPLKDNKPGNFLLKIHPVK----PLPPAGDDNNAENTI--------SS 244
             E +  PLP  QP  +  PG F +  +PVK     LP  G+ +    TI        S 
Sbjct: 183 HQETITVPLP--QPQLNRHPGGFPVSAYPVKHSAVVLPFTGEKSMGNLTIGPSNKPRTSP 242

Query: 245 KILRPIPMLPLSPYPKFAQLNINDRTPE---DPLPLTLKLSTSHPEAQSPTAAS-QSSSN 299
           K++RPIP+ P+ P  K   LN+N +      D LPL+LKLST    +   +A +  SS+ 
Sbjct: 243 KLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAA 302

[Close]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: gi|118487153|gb|ABK95405.1| (unknown [Populus trichocarpa])

HSP 1 Score: 308.9 bits (790), Expect = 9.5e-81
Identity = 186/317 (58.68%), Postives = 215/317 (67.82%), Query Frame = 1 

Query: 4   PRTCSLCGNNGHNSRTCPEGDGGG-ASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQF 63
           PR+CS CGNNGHNSRTC E   GG  S + G MLFGVR+T  E ++SFRKS SMNNLSQ+
Sbjct: 3   PRSCSQCGNNGHNSRTCGESPAGGDQSSSTGIMLFGVRVT--EVAASFRKSYSMNNLSQY 62

Query: 64  D-QPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGI 123
           D QP  + + +  AGY SDDVVH S R R RKRG+PWTEEEH+LFLLGLQK+GKGDWRGI
Sbjct: 63  DEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKIGKGDWRGI 122

Query: 124 SRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEA 183
           SRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTDTF  SSME+D V    E 
Sbjct: 123 SRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDTFMGSSMEEDQVH--QET 182

Query: 184 LPPPLP-----PSQPLKDNKPGNFLLKIHPVKPL----PPAGDDNNAE---------NTI 243
             P LP     P   L +N+PG F +   PV  +     P   DN  E         N  
Sbjct: 183 ATPALPQLQLQPRPCLNNNRPGGFPMSTFPVTAISPVTSPVSGDNPLEKLTSGQTNVNKK 242

Query: 244 SSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLP-LTLKLST-SHPEAQSPTAASQSSSN 299
           SSK++RP+P++P+ P  K A LN+N ++PED  P L+LKLST S  E Q    AS  SS 
Sbjct: 243 SSKLVRPVPIVPIPPSSKMADLNLNQKSPEDQFPALSLKLSTPSSEEQQQSPPASTHSST 302

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g12870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MY1R1_SOLTU7.4e-4944.74Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
DIV_ANTMA2.2e-2457.14Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MYBJ_DICDI3.0e-1038.40Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1[more]
MYBI_DICDI9.1e-0746.88Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1[more]
BLAST of Cp4.1LG01g12870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQE3_CUCSA1.5e-12577.36Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604000 PE=4 SV=1[more]
A0A061E7E9_THECC3.9e-8964.50Myb-like transcription factor family protein OS=Theobroma cacao GN=TCM_010118 PE... [more]
A0A067GVG8_CITSI3.0e-8160.25Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1[more]
B9HLU9_POPTR6.6e-8158.99Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s19610g PE=4 SV=2[more]
A9PGA2_POPTR6.6e-8158.68Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
BLAST of Cp4.1LG01g12870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70000.11.1e-6165.52 myb-like transcription factor family protein[more]
AT1G74840.16.4e-4346.31 Homeodomain-like superfamily protein[more]
AT3G16350.18.4e-4347.60 Homeodomain-like superfamily protein[more]
AT1G19000.11.1e-3938.16 Homeodomain-like superfamily protein[more]
AT5G47390.12.6e-3651.46 myb-like transcription factor family protein[more]
BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434861|ref|XP_004135214.1|2.2e-12577.36PREDICTED: transcription factor MYB1R1 [Cucumis sativus][more]
gi|659090931|ref|XP_008446280.1|3.8e-12275.71PREDICTED: transcription factor MYB1R1 [Cucumis melo][more]
gi|590693842|ref|XP_007044445.1|5.6e-8964.50Myb-like transcription factor family protein [Theobroma cacao][more]
gi|641863979|gb|KDO82665.1|4.3e-8160.25hypothetical protein CISIN_1g021351mg [Citrus sinensis][more]
gi|118487153|gb|ABK95405.1|9.5e-8158.68unknown [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
IPR001878Znf_CCHC
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g12870.1Cp4.1LG01g12870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 97..141
score: 8.8
IPR001005SANT/Myb domainSMARTSM00717santcoord: 94..144
score: 1.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 7..22
score: 8
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 93..144
score: 4.5
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 97..141
score: 3.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 91..147
score: 2.39
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 90..146
score: 16
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 5..188
score: 6.4E
NoneNo IPR availablePANTHERPTHR12374:SF26F25A4.19 PROTEINcoord: 5..188
score: 6.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g12870Cucsa.285620Cucumber (Gy14) v1cgycpeB0754
Cp4.1LG01g12870CmaCh04G016080Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g12870CmoCh04G016860Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g12870Cla008320Watermelon (97103) v1cpewmB444
Cp4.1LG01g12870Cla010130Watermelon (97103) v1cpewmB432
Cp4.1LG01g12870Csa5G604000Cucumber (Chinese Long) v2cpecuB416
Cp4.1LG01g12870MELO3C012039Melon (DHL92) v3.5.1cpemeB377
Cp4.1LG01g12870ClCG05G024870Watermelon (Charleston Gray)cpewcgB393
Cp4.1LG01g12870CSPI05G23150Wild cucumber (PI 183967)cpecpiB415
Cp4.1LG01g12870Lsi04G004990Bottle gourd (USVL1VR-Ls)cpelsiB360
Cp4.1LG01g12870MELO3C017134.2Melon (DHL92) v3.6.1cpemedB459
Cp4.1LG01g12870MELO3C012039.2Melon (DHL92) v3.6.1cpemedB437
Cp4.1LG01g12870CsaV3_1G001910Cucumber (Chinese Long) v3cpecucB0470
Cp4.1LG01g12870CsaV3_5G032040Cucumber (Chinese Long) v3cpecucB0518
Cp4.1LG01g12870Bhi07G001338Wax gourdcpewgoB0568
Cp4.1LG01g12870Bhi08G001191Wax gourdcpewgoB0551
Cp4.1LG01g12870CsGy5G022630Cucumber (Gy14) v2cgybcpeB626
Cp4.1LG01g12870CsGy1G001900Cucumber (Gy14) v2cgybcpeB061
Cp4.1LG01g12870Carg01750Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g12870Cp4.1LG18g08280Cucurbita pepo (Zucchini)cpecpeB346
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g12870Cucurbita pepo (Zucchini)cpecpeB375
Cp4.1LG01g12870Cucurbita maxima (Rimu)cmacpeB726
Cp4.1LG01g12870Cucurbita moschata (Rifu)cmocpeB678
Cp4.1LG01g12870Silver-seed gourdcarcpeB0528