Cp4.1LG01g12560 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTACCTCCGAAAATCCTGATTGTGGGAGCTCTACTTTCTCATATTGAGAGAGTAGCAAAACAGAACCCACAGCCAAGTTATGCTCATCCTCTAATTGGAACTGCACGAGTTGTTGTTCTTTCATGCCCAAACCCATTCATCCTGAACATTCCTATGCAAACTTCCTCTGGAGAGAAGCTTTTGAATCTACTAATTTGGTGCACACAGTTTGATTCTCCTACTCTCCAAAGAGACACCCAACAATGGTGCAGTGCAAGTAGCAGCATTGATTTTGCTGATGTGTCTGAGCCACTCAAATCAGTATCATGCATCGTGCAACAGCTCAAACCCACCTGTAGCAGATATTATCTTCTTTGGATTTTTCCCTTCGAACTTTTCTTCAAAAGGAGAGGGTTTTATACTCTTATAAAGAATGTTTATGTGGAATCTTCTCGCAGATGAATTCAAATATGGGTTATGTGAAAGATATCTTTCACAGAGATCACTATGGAATCGACTCAGAATTGTGAGAAGTACTGATGTACGCGTCATTGTTTTTCATGCTGAATGCTTGAATCAGACTACTCAAAAGACACGTACGAGTGACCTATCGTTCCCGATTTGTCCAAAACGTGAGGATAACCATTCTCCTTAGCAACGAGCAAATTTGAGATGGAGGCATGTGAATTCCCTCCCAAGGCCTAGACCCTGGACCAGCAAGGACGGACCACCAAGGCCATGGGGTTGTGCTTGAAGGGGCCTTACATGCACCTCCACAAAATATAATCCTTTATGTAACCCAAAATTGTGTGAACCTTTGTTTCAAGGGAAATTCCAGCAAAGAATTCCCATCAAAGTTAACAAAAAGTGGCTCAAATTCTTCAAAATTGTTGAGTGCAAGGCGACTTGACAAAGAATTTGTGGCTGTTCATGAACTTCAGCCGGAC GTACCTCCGAAAATCCTGATTGTGGGAGCTCTACTTTCTCATATTGAGAGAGTAGCAAAACAGAACCCACAGCCAAGTTATGCTCATCCTCTAATTGGAACTGCACGAGTTGTTGTTCTTTCATGCCCAAACCCATTCATCCTGAACATTCCTATGCAAACTTCCTCTGGAGAGAAGCTTTTGAATCTACTAATTTGGTGCACACAAATTGTGAGAAGTACTGATGTACGCGTCATTGTTTTTCATGCTGAATGCTTGAATCAGACTACTCAAAAGACACGTACGAGTGACCTATCGTTCCCGATTTGTCCAAAACGCCTAGACCCTGGACCAGCAAGGACGGACCACCAAGGCCATGGGGTTGTGCTTGAAGGGGCCTTACATGCACCTCCACAAAATATAATCCTTTATGTAACCCAAAATTGTGTGAACCTTTGTTTCAAGGGAAATTCCAGCAAAGAATTCCCATCAAAGTTAACAAAAAGTGGCTCAAATTCTTCAAAATTGTTGAGTGCAAGGCGACTTGACAAAGAATTTGTGGCTGTTCATGAACTTCAGCCGGAC GTACCTCCGAAAATCCTGATTGTGGGAGCTCTACTTTCTCATATTGAGAGAGTAGCAAAACAGAACCCACAGCCAAGTTATGCTCATCCTCTAATTGGAACTGCACGAGTTGTTGTTCTTTCATGCCCAAACCCATTCATCCTGAACATTCCTATGCAAACTTCCTCTGGAGAGAAGCTTTTGAATCTACTAATTTGGTGCACACAAATTGTGAGAAGTACTGATGTACGCGTCATTGTTTTTCATGCTGAATGCTTGAATCAGACTACTCAAAAGACACGTACGAGTGACCTATCGTTCCCGATTTGTCCAAAACGCCTAGACCCTGGACCAGCAAGGACGGACCACCAAGGCCATGGGGTTGTGCTTGAAGGGGCCTTACATGCACCTCCACAAAATATAATCCTTTATGTAACCCAAAATTGTGTGAACCTTTGTTTCAAGGGAAATTCCAGCAAAGAATTCCCATCAAAGTTAACAAAAAGTGGCTCAAATTCTTCAAAATTGTTGAGTGCAAGGCGACTTGACAAAGAATTTGTGGCTGTTCATGAACTTCAGCCGGAC VPPKILIVGALLSHIERVAKQNPQPSYAHPLIGTARVVVLSCPNPFILNIPMQTSSGEKLLNLLIWCTQIVRSTDVRVIVFHAECLNQTTQKTRTSDLSFPICPKRLDPGPARTDHQGHGVVLEGALHAPPQNIILYVTQNCVNLCFKGNSSKEFPSKLTKSGSNSSKLLSARRLDKEFVAVHELQPD
BLAST of Cp4.1LG01g12560 vs. TrEMBL
Match: A0A0A0KSR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606260 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.8e-19 Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. TrEMBL
Match: A0A061EA54_THECC (RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_011682 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.5e-14 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. TrEMBL
Match: A0A061EAB9_THECC (RING/U-box superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_011682 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.5e-14 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. TrEMBL
Match: A0A061EBW4_THECC (Mandelonitrile lyase, related, putative isoform 3 OS=Theobroma cacao GN=TCM_011682 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.5e-14 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. TrEMBL
Match: W9S0B6_9ROSA (Methyltransferase-like protein 7B OS=Morus notabilis GN=L484_015674 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12 Identity = 58/143 (40.56%), Postives = 75/143 (52.45%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. TAIR10
Match: AT1G14180.1 (AT1G14180.1 RING/U-box superfamily protein) HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08 Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. NCBI nr
Match: gi|659091111|ref|XP_008446375.1| (PREDICTED: uncharacterized protein LOC103489136 [Cucumis melo]) HSP 1 Score: 102.4 bits (254), Expect = 8.6e-19 Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. NCBI nr
Match: gi|449435334|ref|XP_004135450.1| (PREDICTED: uncharacterized protein LOC101203618 [Cucumis sativus]) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18 Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. NCBI nr
Match: gi|590700032|ref|XP_007046059.1| (RING/U-box superfamily protein, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. NCBI nr
Match: gi|590700036|ref|XP_007046060.1| (Mandelonitrile lyase, related, putative isoform 3 [Theobroma cacao]) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
BLAST of Cp4.1LG01g12560 vs. NCBI nr
Match: gi|590700028|ref|XP_007046058.1| (RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |