Cp4.1LG01g12060 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCCTCCCTCTCTCCCTGTACATCGTCTTCTGCCACCAATGCCCAGCTCTTCATGATGATATCGATGCTTCTACTCGTCTTTGTCAACTCATCCGCCACCAGACTCTCCGGTTATCCACCTTCCACCGGCTTGCCAGACGCTTCTCCGACCCCCTCTAGCCACCAACTGCCTCACCGTGAACTGCAGCAGCTTCATCCTTGTGATGCTCTAACCCATGAAAACTCACGTTCTTTGTGTATTCACCTTTATAGAGTTTACCAACACCACCTACCTGTTCATGTCCCGCCGATGCTGACACACAATGAGATTGACGCCCGATATGGCGTCGAGAAGAGACTCGTGCCCTCGGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCCCTCTCTCCCTGTACATCGTCTTCTGCCACCAATGCCCAGCTCTTCATGATGATATCGATGCTTCTACTCGTCTTTGTCAACTCATCCGCCACCAGACTCTCCGGTTATCCACCTTCCACCGGCTTGCCAGACGCTTCTCCGACCCCCTCTAGCCACCAACTGCCTCACCGTGAACTGCAGCAGCTTCATCCTTGTGATGCTCTAACCCATGAAAACTCACGTTCTTTGTGTATTCACCTTTATAGAGTTTACCAACACCACCTACCTGTTCATGTCCCGCCGATGCTGACACACAATGAGATTGACGCCCGATATGGCGTCGAGAAGAGACTCGTGCCCTCGGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCCCTCTCTCCCTGTACATCGTCTTCTGCCACCAATGCCCAGCTCTTCATGATGATATCGATGCTTCTACTCGTCTTTGTCAACTCATCCGCCACCAGACTCTCCGGTTATCCACCTTCCACCGGCTTGCCAGACGCTTCTCCGACCCCCTCTAGCCACCAACTGCCTCACCGTGAACTGCAGCAGCTTCATCCTTGTGATGCTCTAACCCATGAAAACTCACGTTCTTTGTGTATTCACCTTTATAGAGTTTACCAACACCACCTACCTGTTCATGTCCCGCCGATGCTGACACACAATGAGATTGACGCCCGATATGGCGTCGAGAAGAGACTCGTGCCCTCGGGGCCAAACCCTCTTCACAACTGA MKASLSPCTSSSATNAQLFMMISMLLLVFVNSSATRLSGYPPSTGLPDASPTPSSHQLPHRELQQLHPCDALTHENSRSLCIHLYRVYQHHLPVHVPPMLTHNEIDARYGVEKRLVPSGPNPLHN
BLAST of Cp4.1LG01g12060 vs. Swiss-Prot
Match: CLE9_ARATH (CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana GN=CLE9 PE=2 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. Swiss-Prot
Match: CLE10_ARATH (CLAVATA3/ESR (CLE)-related protein 10 OS=Arabidopsis thaliana GN=CLE10 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TrEMBL
Match: A0A0A0KU71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606580 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-30 Identity = 83/129 (64.34%), Postives = 95/129 (73.64%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TrEMBL
Match: A0A151TFD4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012033 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TrEMBL
Match: A0A067L254_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15685 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.8e-11 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TrEMBL
Match: U5G569_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0008s09310g PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TrEMBL
Match: E9L565_SOYBN (CLE19 protein OS=Glycine max GN=GLYMA_01G056400 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.6e-10 Identity = 50/125 (40.00%), Postives = 65/125 (52.00%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TAIR10
Match: AT1G26600.1 (AT1G26600.1 CLAVATA3/ESR-RELATED 9) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10 Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TAIR10
Match: AT1G69320.1 (AT1G69320.1 CLAVATA3/ESR-RELATED 10) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. TAIR10
Match: AT1G73965.1 (AT1G73965.1 CLAVATA3/ESR-RELATED 13) HSP 1 Score: 48.1 bits (113), Expect = 4.5e-06 Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. NCBI nr
Match: gi|659091196|ref|XP_008446421.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 9-like [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 5.9e-32 Identity = 86/129 (66.67%), Postives = 96/129 (74.42%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. NCBI nr
Match: gi|700196790|gb|KGN51967.1| (hypothetical protein Csa_5G606580 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-30 Identity = 83/129 (64.34%), Postives = 95/129 (73.64%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. NCBI nr
Match: gi|1009154080|ref|XP_015894976.1| (PREDICTED: inactive protein FON2 SPARE1-like [Ziziphus jujuba]) HSP 1 Score: 79.0 bits (193), Expect = 6.7e-12 Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. NCBI nr
Match: gi|1009154078|ref|XP_015894975.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 9-like [Ziziphus jujuba]) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11 Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = 1
BLAST of Cp4.1LG01g12060 vs. NCBI nr
Match: gi|1012354582|gb|KYP65769.1| (hypothetical protein KK1_012033 [Cajanus cajan]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |