Cp4.1LG01g11870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g11870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane protein, putative
LocationCp4.1LG01 : 5818048 .. 5819055 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCAGTGGCGCCGCAGCAGAAGCCGCTATGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTGGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCATTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCATGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGCTAAATGTTTAGTACGCCCAAGAAATTGGGAGTGTAGTTCGATTCATTGACTGATTCATGTTTAAAACTGCGGTTTGTTGTTACAGGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTGTTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATTTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCACTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAAGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCCATCAACGTATTTTTCTTCTGCTCCTCCTCCTCCTCCTCCTCCTCTGTTCCTACATTATTAATTACAATGGGTTTATTTAGTTTTATAAAAATGGCAGGACATAGCATGGTTCTGGTTCGGAAGGACATTGGCGGTGGCTAATTTTGCGTACTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCGAAAGGTATTTTAAGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

mRNA sequence

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCAGTGGCGCCGCAGCAGAAGCCGCTATGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTGGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCATTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCATGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGCTAAATGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTGTTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATTTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCACTGGTGCCGGTTCTGTACACGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Coding sequence (CDS)

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCAGTGGCGCCGCAGCAGAAGCCGCTATGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTGGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCATTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCATGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGCTAAATGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTGTTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATTTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCACTGGTGCCGGTTCTGTACACGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Protein sequence

MSGVTLAVAPRTDPNDAVAPQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Homology
[Close]
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match: A0A0A0KAF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094170 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 158/190 (83.16%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAP------QQKPLWRQQ--QEQNSVVGGVMGSLRVIELQLVA 60
           MSGVTLA+ P TD NDA  P      Q KP  RQQ  QEQN+VVGGVMGSLRVIELQLVA
Sbjct: 1   MSGVTLAMGPGTDSNDAAMPELKRAQQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVA 60

Query: 61  FIMVFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRM 120
           FIMVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQA    S LFRM
Sbjct: 61  FIMVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTRSPEIFQA----STLFRM 120

Query: 121 YVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180
           YVVVGTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR
Sbjct: 121 YVVVGTTIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180

Query: 181 ALVPVLYTDR 183
           ALVP+LYT R
Sbjct: 181 ALVPLLYTVR 186

[Close]
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match: A0A061E567_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008613 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 143/186 (76.88%), Postives = 160/186 (86.02%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAP----QQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMV 60
           MSGVTLAVAPR++P+  +AP    + KPL  +QQ+Q SV GG+MGSLRVIELQLVAFIMV
Sbjct: 1   MSGVTLAVAPRSEPDKTIAPGEKLEHKPL--RQQQQQSVSGGLMGSLRVIELQLVAFIMV 60

Query: 61  FSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVV 120
           FS SGLVP+LDL+FPAF S Y++ L+ FAFPSHG  S  SQEIFQ    GSKLFR+YV++
Sbjct: 61  FSISGLVPLLDLVFPAFASTYIIALSLFAFPSHGRISTGSQEIFQ----GSKLFRLYVIL 120

Query: 121 GTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180
           GTTIGLFLPLAYVLGGFAR D+HAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP
Sbjct: 121 GTTIGLFLPLAYVLGGFARGDKHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180

Query: 181 VLYTDR 183
           VLYT R
Sbjct: 181 VLYTVR 180

[Close]
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match: A5BC59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014982 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.9e-67
Identity = 145/188 (77.13%), Postives = 159/188 (84.57%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVA-----PQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIM 60
           MSGV+LAVAPRT+P+         PQQ+P      +Q SVVGGVMGSLRVIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHQQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 61  VFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHA-SGASQEIFQAMLNGSKLFRMYV 120
           VFSASGLVP+LDLIFPAF SAYLL L+RFAFP+HG + S  SQEIFQ    GS+LFR+YV
Sbjct: 61  VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSSTSTGSQEIFQ----GSRLFRLYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           +VGT IGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTEN+ISGLSLFSPPVRAL
Sbjct: 121 IVGTAIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRAL 180

Query: 181 VPVLYTDR 183
           VP+LYT R
Sbjct: 181 VPLLYTVR 184

[Close]
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match: B9RMB3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079240 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 140/183 (76.50%), Postives = 156/183 (85.25%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAPQQKPL-WRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSA 60
           MSGV+LA  PR +P+DA     KPL  R  ++Q S++GGVMGSLRVIELQLVAFIMVFSA
Sbjct: 1   MSGVSLATVPRNEPSDATNDPMKPLPARLDKQQQSMMGGVMGSLRVIELQLVAFIMVFSA 60

Query: 61  SGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTT 120
           SGLVP+ DL+FPAF SAYLL+LARF FPSHG    + QEIFQ    GSKLFR+YVVVGTT
Sbjct: 61  SGLVPLFDLVFPAFASAYLLVLARFVFPSHGGTRTSPQEIFQ----GSKLFRLYVVVGTT 120

Query: 121 IGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLY 180
           +GLFLPLAYVLGGFAR D+HAVRSATPHLFLLSFQILTEN+ISGLSLFSPPVRALVP+LY
Sbjct: 121 MGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPMLY 179

Query: 181 TDR 183
           T R
Sbjct: 181 TVR 179

[Close]
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match: D7TB12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03990 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.9e-66
Identity = 144/188 (76.60%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVA-----PQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIM 60
           MSGV+LAVAPRT+P+         PQQ+P       Q SVVGGVMGSLRVIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHHQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 61  VFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHA-SGASQEIFQAMLNGSKLFRMYV 120
           VFSASGLVP+LDLIFPAF SAYLL L+RFAFP+HG   S  S+EIFQ    GS+LFR+YV
Sbjct: 61  VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSTTSTGSREIFQ----GSRLFRLYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           +VGT IGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTEN+ISGLSLFSPPVRAL
Sbjct: 121 IVGTAIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRAL 180

Query: 181 VPVLYTDR 183
           VP+LYT R
Sbjct: 181 VPLLYTVR 184

[Close]
BLAST of Cp4.1LG01g11870 vs. TAIR10
Match: AT1G27990.1 (AT1G27990.1 unknown protein)

HSP 1 Score: 237.3 bits (604), Expect = 8.8e-63
Identity = 129/180 (71.67%), Postives = 146/180 (81.11%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAPQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGV+LAV PRTD +   +  +K  W          GG+MGSLRVIELQLVAFI+VFSAS
Sbjct: 1   MSGVSLAVGPRTDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60

Query: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVPILD++FPAF S Y++ L+R AFPSHG  S AS E+F+    GSKLFR+YV+ GTTI
Sbjct: 61  GLVPILDMLFPAFASIYIIALSRLAFPSHG-VSTASPEVFR----GSKLFRLYVISGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFAR D+HAVRSATPHLFLLS QILTENVISGLSLFSPPVRALVP+LYT
Sbjct: 121 GLFLPLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALVPLLYT 175

[Close]
BLAST of Cp4.1LG01g11870 vs. TAIR10
Match: AT5G52420.1 (AT5G52420.1 unknown protein)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-20
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 1 

Query: 15  NDAVAPQQKPLWRQQQEQNSV--VGGVMGSLRVIELQLVAFIMVFSASGLVPILDLIFPA 74
           ND   P+++    Q Q  ++V   G   G     +L ++A I+V SASGLV I D IF  
Sbjct: 10  NDITLPKEEEEEHQTQSTSTVSSTGKPAGFFSFRQLNILAIIIVLSASGLVTIQDFIFTI 69

Query: 75  FTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGS--KLFRMYVVVGTTIGLFLPLAYVL 134
            T  Y   L++  FP H + +        A L  S  K+FR+YV     +GL +P+ Y+ 
Sbjct: 70  LTLIYFFFLSKLIFPPHNNPNR------DAPLTSSTNKIFRIYVTAAGIVGLIIPICYIF 129

Query: 135 GGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTDR 183
            G    D++ V +A PH+FLL+ QI  E + +    FS P R LVP++Y  R
Sbjct: 130 EGIVEDDKNGVSAAAPHVFLLASQIFMEGLATMFG-FSAPARILVPIVYNAR 174

[Close]
BLAST of Cp4.1LG01g11870 vs. TAIR10
Match: AT5G23920.1 (AT5G23920.1 unknown protein)

HSP 1 Score: 67.8 bits (164), Expect = 9.2e-12
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 1 

Query: 47  ELQLVAFIMVFSASGLVPILDLIFPAFTSAYLL-LLARFAFPSHGHASGASQEIFQAMLN 106
           +L  ++F+++ +A GLV I ++ F      YL   L+RFAFP        +++  +    
Sbjct: 32  QLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFPRK-----QTEQKKRLSNP 91

Query: 107 GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLS 166
            +KLF+ Y +    IGL  PL Y+  G  R D H   +A PHLFLLS Q  TE +  G S
Sbjct: 92  KNKLFQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPI--GFS 151

Query: 167 -LFSPPVRALVPVLYTDR 183
             +S P+  L PV Y  R
Sbjct: 152 DKYSMPIGILGPVFYNAR 162

[Close]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match: gi|778711828|ref|XP_004140642.2| (PREDICTED: uncharacterized protein LOC101203000 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72
Identity = 158/190 (83.16%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAP------QQKPLWRQQ--QEQNSVVGGVMGSLRVIELQLVA 60
           MSGVTLA+ P TD NDA  P      Q KP  RQQ  QEQN+VVGGVMGSLRVIELQLVA
Sbjct: 1   MSGVTLAMGPGTDSNDAAMPELKRAQQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVA 60

Query: 61  FIMVFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRM 120
           FIMVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQ    GS LFRM
Sbjct: 61  FIMVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTRSPEIFQ----GSTLFRM 120

Query: 121 YVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180
           YVVVGTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR
Sbjct: 121 YVVVGTTIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180

Query: 181 ALVPVLYTDR 183
           ALVP+LYT R
Sbjct: 181 ALVPLLYTVR 186

[Close]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match: gi|659119836|ref|XP_008459868.1| (PREDICTED: uncharacterized protein LOC103498861 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72
Identity = 157/188 (83.51%), Postives = 163/188 (86.70%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAV----APQQKPLWRQQ--QEQNSVVGGVMGSLRVIELQLVAFI 60
           MSGV+LAV PRT+ NDA     A Q KP  R+Q  QEQNSVVGGVMGSLRVIELQLVAFI
Sbjct: 1   MSGVSLAVGPRTESNDAAELKRAQQLKPPLRRQHQQEQNSVVGGVMGSLRVIELQLVAFI 60

Query: 61  MVFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYV 120
           MVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQ    GS LFRMYV
Sbjct: 61  MVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTGSPEIFQ----GSTLFRMYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           VVGTT+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL
Sbjct: 121 VVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180

Query: 181 VPVLYTDR 183
           VP+LYT R
Sbjct: 181 VPLLYTVR 184

[Close]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match: gi|700191244|gb|KGN46448.1| (hypothetical protein Csa_6G094170 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 5.7e-72
Identity = 158/190 (83.16%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAP------QQKPLWRQQ--QEQNSVVGGVMGSLRVIELQLVA 60
           MSGVTLA+ P TD NDA  P      Q KP  RQQ  QEQN+VVGGVMGSLRVIELQLVA
Sbjct: 1   MSGVTLAMGPGTDSNDAAMPELKRAQQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVA 60

Query: 61  FIMVFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRM 120
           FIMVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQA    S LFRM
Sbjct: 61  FIMVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTRSPEIFQA----STLFRM 120

Query: 121 YVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180
           YVVVGTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR
Sbjct: 121 YVVVGTTIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180

Query: 181 ALVPVLYTDR 183
           ALVP+LYT R
Sbjct: 181 ALVPLLYTVR 186

[Close]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match: gi|590691913|ref|XP_007043916.1| (Uncharacterized protein TCM_008613 [Theobroma cacao])

HSP 1 Score: 263.5 bits (672), Expect = 3.2e-67
Identity = 143/186 (76.88%), Postives = 160/186 (86.02%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVAP----QQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMV 60
           MSGVTLAVAPR++P+  +AP    + KPL  +QQ+Q SV GG+MGSLRVIELQLVAFIMV
Sbjct: 1   MSGVTLAVAPRSEPDKTIAPGEKLEHKPL--RQQQQQSVSGGLMGSLRVIELQLVAFIMV 60

Query: 61  FSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVV 120
           FS SGLVP+LDL+FPAF S Y++ L+ FAFPSHG  S  SQEIFQ    GSKLFR+YV++
Sbjct: 61  FSISGLVPLLDLVFPAFASTYIIALSLFAFPSHGRISTGSQEIFQ----GSKLFRLYVIL 120

Query: 121 GTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180
           GTTIGLFLPLAYVLGGFAR D+HAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP
Sbjct: 121 GTTIGLFLPLAYVLGGFARGDKHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180

Query: 181 VLYTDR 183
           VLYT R
Sbjct: 181 VLYTVR 180

[Close]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match: gi|147806249|emb|CAN72198.1| (hypothetical protein VITISV_014982 [Vitis vinifera])

HSP 1 Score: 263.1 bits (671), Expect = 4.2e-67
Identity = 145/188 (77.13%), Postives = 159/188 (84.57%), Query Frame = 1 

Query: 1   MSGVTLAVAPRTDPNDAVA-----PQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIM 60
           MSGV+LAVAPRT+P+         PQQ+P      +Q SVVGGVMGSLRVIELQLVAFIM
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHQQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 61  VFSASGLVPILDLIFPAFTSAYLLLLARFAFPSHGHA-SGASQEIFQAMLNGSKLFRMYV 120
           VFSASGLVP+LDLIFPAF SAYLL L+RFAFP+HG + S  SQEIFQ    GS+LFR+YV
Sbjct: 61  VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSSTSTGSQEIFQ----GSRLFRLYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           +VGT IGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTEN+ISGLSLFSPPVRAL
Sbjct: 121 IVGTAIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRAL 180

Query: 181 VPVLYTDR 183
           VP+LYT R
Sbjct: 181 VPLLYTVR 184

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g11870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g11870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAF1_CUCSA4.0e-7283.16Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094170 PE=4 SV=1[more]
A0A061E567_THECC2.3e-6776.88Uncharacterized protein OS=Theobroma cacao GN=TCM_008613 PE=4 SV=1[more]
A5BC59_VITVI2.9e-6777.13Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014982 PE=4 SV=1[more]
B9RMB3_RICCO1.5e-6676.50Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079240 PE=4 SV=1[more]
D7TB12_VITVI1.9e-6676.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03990 PE=4 SV=... [more]
BLAST of Cp4.1LG01g11870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27990.18.8e-6371.67 unknown protein[more]
AT5G52420.19.2e-2035.47 unknown protein[more]
AT5G23920.19.2e-1236.23 unknown protein[more]
BLAST of Cp4.1LG01g11870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711828|ref|XP_004140642.2|2.6e-7283.16PREDICTED: uncharacterized protein LOC101203000 [Cucumis sativus][more]
gi|659119836|ref|XP_008459868.1|2.6e-7283.51PREDICTED: uncharacterized protein LOC103498861 [Cucumis melo][more]
gi|700191244|gb|KGN46448.1|5.7e-7283.16hypothetical protein Csa_6G094170 [Cucumis sativus][more]
gi|590691913|ref|XP_007043916.1|3.2e-6776.88Uncharacterized protein TCM_008613 [Theobroma cacao][more]
gi|147806249|emb|CAN72198.1|4.2e-6777.13hypothetical protein VITISV_014982 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g11870.1Cp4.1LG01g11870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33829FAMILY NOT NAMEDcoord: 2..182
score: 5.6E
NoneNo IPR availablePANTHERPTHR33829:SF2SUBFAMILY NOT NAMEDcoord: 2..182
score: 5.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g11870Cucsa.349520Cucumber (Gy14) v1cgycpeB0913
Cp4.1LG01g11870CmaCh17G014310Cucurbita maxima (Rimu)cmacpeB398
Cp4.1LG01g11870CmoCh17G013730Cucurbita moschata (Rifu)cmocpeB360
Cp4.1LG01g11870Cla001510Watermelon (97103) v1cpewmB471
Cp4.1LG01g11870Csa6G094170Cucumber (Chinese Long) v2cpecuB464
Cp4.1LG01g11870MELO3C022327Melon (DHL92) v3.5.1cpemeB389
Cp4.1LG01g11870ClCG06G002030Watermelon (Charleston Gray)cpewcgB402
Cp4.1LG01g11870CSPI06G07700Wild cucumber (PI 183967)cpecpiB465
Cp4.1LG01g11870Lsi09G017390Bottle gourd (USVL1VR-Ls)cpelsiB312
Cp4.1LG01g11870MELO3C022327.2Melon (DHL92) v3.6.1cpemedB449
Cp4.1LG01g11870CsaV3_6G008080Cucumber (Chinese Long) v3cpecucB0573
Cp4.1LG01g11870Bhi12G002161Wax gourdcpewgoB0495
Cp4.1LG01g11870CsGy6G007750Cucumber (Gy14) v2cgybcpeB802
Cp4.1LG01g11870Carg11587Silver-seed gourdcarcpeB0024
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g11870Cucurbita pepo (Zucchini)cpecpeB330
Cp4.1LG01g11870Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g11870Cucumber (Gy14) v1cgycpeB0387
Cp4.1LG01g11870Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g11870Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g11870Cucurbita maxima (Rimu)cmacpeB919
Cp4.1LG01g11870Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g11870Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g11870Wild cucumber (PI 183967)cpecpiB437
Cp4.1LG01g11870Cucumber (Chinese Long) v2cpecuB437
Cp4.1LG01g11870Bottle gourd (USVL1VR-Ls)cpelsiB354
Cp4.1LG01g11870Watermelon (Charleston Gray)cpewcgB409
Cp4.1LG01g11870Watermelon (97103) v1cpewmB417
Cp4.1LG01g11870Melon (DHL92) v3.5.1cpemeB365
Cp4.1LG01g11870Cucumber (Gy14) v2cgybcpeB646
Cp4.1LG01g11870Melon (DHL92) v3.6.1cpemedB441
Cp4.1LG01g11870Silver-seed gourdcarcpeB0938
Cp4.1LG01g11870Silver-seed gourdcarcpeB1259
Cp4.1LG01g11870Silver-seed gourdcarcpeB1360
Cp4.1LG01g11870Cucumber (Chinese Long) v3cpecucB0541
Cp4.1LG01g11870Wax gourdcpewgoB0553