Cp4.1LG01g11010 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATATTCATTATTGTTAAACCTTTAATCTCGAAAGAAAGAGTATATGTATTTGTAACAATTACATGTCAATTATCACAAGCATTATTATTACACTAGTGTCTCCTCATTAATCAAAGTAAGAGGTGGATAGAAGTACTAATATCACGTTTAAAAAAAGAGATGGGAAAACAGAGAAATGGCAGATAAGTTTGATGAAAAGACAAATATTTGAGGTTAGGAGCGTTGAATGATTCGAGTTGTTTGGAATTGGAATTGGAATTGGAATTGGAATTGGAGAGTGGAAATCCTGTGTTCTCTTCATTTCTCTCTCATGGTTTGAACTGTCTCAAAGTAACCCTGAAACCTTAAACAAAAAGCAAACACTGTTATCAACATTCTCTTTCCCTCTCTTCTTTTGTTGGGTCCCTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTCCTTCAAATCCCAATTATTAAATCCCCCCCCTCCCCTTCTTCTTCACTCCAAAATTCCCAATTCCCCGTTTCTCCCTTTCTCTCTCCAACCATGGCCTCTGCTTCCAACTTCTCCCTCCCTCCCCACTTTTTATCCGACCACCATAACCTCCCCACCGACTTCCCTTATCACTTCAACTCCTCCCCTGTTCATTCCCCCCTCGGATCTGTTCTTGGCGATGACGACAACGACGACGACGGCGACTTTCTTGCGGCGTTGACACACCGCCTTACTCACACCACTCTTCGTGATTCCCTGAAACCTGCTTCTGTCCACAAACCCCAAGTACCCATCTTTTGATTTTTCTTTAATTCACTCGATTTTTGACTCTTCAATGGGTTTTTCATTTACCGGCGACTCTGTTTTTTTTTTTTTTNCGGCCATGGCTAGTTCTCCTCAGTCTACTCTTAGTGGGTTTGGGAGTTGGTCGGCTTGGAGCTCGGTGTCGAGCGACGGAAGCCCAAACGGGCCGTCTCAGGCGCCGTCTCCTCCGACCACTCCCTTCGGCGGCGATGAAGACACTTGGGATCTTATCTATGCTGCTGCAGGGCAAGTTGCGAGACTCAAAATGAACACTCAAAGAGATGGGATTATTGGTCCTTCTCAAAGTTCTTCAAAGCTTGCTTCTTCCATGAGAAACGCTGGATTTTACTCCCACCCTTCACAGGTGAAGTTAAATTAGCCTCGTTTTTTCACTCCCTCGTTCTCTGTTTTTGATCTGTAATCGTTTAACTCTGTTTTCTTCTCTGTTTTCAGTTCGGAACAGAGTCTCCGATTAATAAACAGGAAAGCTGTTTAAACTGGGGGAGACAAGTGACGGTTGAAAATCAACAGATCTATTGCGGAAGGGGAGATGTTCACCATGAACATGGGAATTTTGTTCGTGCTGTGGATTTTCCTCAATCCGCTTGGCCTTCTCTGCATCCCCATCACCGGAGAAACCCTTCTCAGCCTAGTACTCCCGCTGTATCTGCCGCCTACCACGGCAGCGGATCGGCCCCCAAAAAGGAGTGCACAGGTACTGGCGTCTTCTTGCCTCGCCGATACGACAACAACCCACCACAATCTCGCAAAAGAGCAGGTACTTTTGTTTCTTCTTTTACCAAATTGGAAATCTCGGATTCTCGAATTTGAACTTGATTCTTAACTTTTGCTCTGTTTCTTCAGACTGTGGCTCGATTGCTCTGCTTCCAGGGAAGAACGTTCAGGACTTCAACCGATCTGTTCCCCAGATGACGTCAAATCGCCGCCTTCCACCGAGCTACGGTGAGTATGTTGAAACAATTCAAACATCTTGAGATCTGTTAAATAGTAATATGCTAATGAGCTTTTTTTATTTTTATTTTTATTTTCTTCAGAAGCTTTAATGGCTCAAAGAAACGCCATTTTCGCGCAGCAGAGGCTGAGTTATTCCCGGCCGGCAGAAAGAGGCCAAAGCCATGAGTTTCTTCTTCCTCAGGAGTGGACATACTAAAGCAAACAAAACTACTGGAAGTTGAAAAAAAAAAGTGCTTTTTCATTGGGAAGATTGAAGTGTTCTTTCTTTTAGAATAGGGAACAATAAAGATATGAATTAAGGGTTGTAACTTAAAGATGGAAAAAGGATTTGTTTGCAGGTTTGTAGTTACCAGTTAGGTTTCATTAGATGGAGAACAGAGTAAAAATGCAGCGTTCATTCATCAGAAAGGGGGGAAACAGAGAAAAAGAGAGTAATTTATAGGAAAGTGGGGACTTAGGGACAGAGAGATATTGTAATAATTTTTGTGGGTTTCTTAATTGAAACATATAGCTATAGTATATAGCTATAGACCCTTCTAATATAAATAAACTATTTGTTGATTTATGTGTAGAAGCAAGAGCTTCTTATTTGTTGATAAACATTGGTTAGTATTAAAGTTTGAATCTTTAACTTTGTGATTTAATATATGTTCTTTTTTCCTCCAAAAAAATAGACAATCTTATTGGGAGCATGGCCATTCCCATGCCATGCGACCACGCCGACCGTACGTTTCTATGAATAGTTTTATGTTGGAGCAATGGGGCTGTCCTCTGTACTCGACATGAATGGCATCCACTTCAATCTGGATCTTGGATTTTGTTTCAACTTTGTTAGCATAAATCTAAATTAATCAATAACTAACATTCATTATAATAATGGCTTCAGATTATTCAACAAACATCAAATCCACATTATAGAAACAAGACATTATCACATGTTAGCATTATATTATCTTATCTTCTGCTGCTGCTGCTCTTGATAGAGGCTCCACTCTAACTGGTGCAGCAACTCAACCAAAAGTGTGAAATTCTTGCATTTCATGTTCAAATCCATCTTATCTAACTACAGTCCACTTTTCTTTATGCATAATTCTAGCAGTGATTTGATCAAAAGCTTGTCCAGTCTTTATGCTTCAGAATGAAGATTTCAAGCTTGTTGTGAAATTTACTCAACCTTCACTCTACCTTTTCTACTGTTTTCATATAAGTAGGCAAAAGCAAAAGATGTGCAAATTTTATGTGATTTGATAAACGGGTCGTTTAAGTATAAAAGAGAAATCTTACTCATATCTTACAGTGTTTGTGTTATGTCTGTTTGTAGTGTTCTAAGATCTTCAAAGAGAGCAGAGGAGGAAAAATTAGACTGCGATGCCACGGAGAACTCTTCTGATGCTATCTTCATCTGGGTTTGCGCCTATTGTGTTATGACCCTTGCTTACCATCCACTTTGCCACCCTCGTCAAGCCAAGCCACTACAATTCATGAAAGTGATATCAATAGGTGAAAGAAAAGGCCTCAAGCTATCAGTTTTCTTGTGGATGGAAAAAAAGGCAACTATCCATTATTGTATACAGAAACGATCATAAGCATTCATAATCCCAAGCCTCACAACTGAAAAGGAAGGACTTGAAGCAATTGACTTTGATCTAACTTTTCTT GAAAATATTCATTATTGTTAAACCTTTAATCTCGAAAGAAAGAGTATATGTATTTGTAACAATTACATGTCAATTATCACAAGCATTATTATTACACTAGTGTCTCCTCATTAATCAAAGTAAGAGGTGGATAGAAGTACTAATATCACGTTTAAAAAAAGAGATGGGAAAACAGAGAAATGGCAGATAAGTTTGATGAAAAGACAAATATTTGAGGTTAGGAGCGTTGAATGATTCGAGTTGTTTGGAATTGGAATTGGAATTGGAATTGGAATTGGAGAGTGGAAATCCTGTGTTCTCTTCATTTCTCTCTCATGGTTTGAACTGTCTCAAAGTAACCCTGAAACCTTAAACAAAAAGCAAACACTGTTATCAACATTCTCTTTCCCTCTCTTCTTTTGTTGGGTCCCTCTTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTCCTCCTTCAAATCCCAATTATTAAATCCCCCCCCTCCCCTTCTTCTTCACTCCAAAATTCCCAATTCCCCGTTTCTCCCTTTCTCTCTCCAACCATGGCCTCTGCTTCCAACTTCTCCCTCCCTCCCCACTTTTTATCCGACCACCATAACCTCCCCACCGACTTCCCTTATCACTTCAACTCCTCCCCTGTTCATTCCCCCCTCGGATCTGTTCTTGGCGATGACGACAACGACGACGACGGCGACTTTCTTGCGGCGTTGACACACCGCCTTACTCACACCACTCTTCGTGATTCCCTGAAACCTGCTTCTGTCCACAAACCCCAAGTACCCATCTTTTGATTTTTCTTTAATTCACTCGATTTTTGACTCTTCAATGGGTTTTTCATTTACCGGCGACTCTGTTTTTTTTTTTTTTNCGGCCATGGCTAGTTCTCCTCAGTCTACTCTTAGTGGGTTTGGGAGTTGGTCGGCTTGGAGCTCGGTGTCGAGCGACGGAAGCCCAAACGGGCCGTCTCAGGCGCCGTCTCCTCCGACCACTCCCTTCGGCGGCGATGAAGACACTTGGGATCTTATCTATGCTGCTGCAGGGCAAGTTGCGAGACTCAAAATGAACACTCAAAGAGATGGGATTATTGGTCCTTCTCAAAGTTCTTCAAAGCTTGCTTCTTCCATGAGAAACGCTGGATTTTACTCCCACCCTTCACAGTTCGGAACAGAGTCTCCGATTAATAAACAGGAAAGCTGTTTAAACTGGGGGAGACAAGTGACGGTTGAAAATCAACAGATCTATTGCGGAAGGGGAGATGTTCACCATGAACATGGGAATTTTGTTCGTGCTGTGGATTTTCCTCAATCCGCTTGGCCTTCTCTGCATCCCCATCACCGGAGAAACCCTTCTCAGCCTAGTACTCCCGCTGTATCTGCCGCCTACCACGGCAGCGGATCGGCCCCCAAAAAGGAGTGCACAGGTACTGGCGTCTTCTTGCCTCGCCGATACGACAACAACCCACCACAATCTCGCAAAAGAGCAGACTGTGGCTCGATTGCTCTGCTTCCAGGGAAGAACGTTCAGGACTTCAACCGATCTGTTCCCCAGATGACGTCAAATCGCCGCCTTCCACCGAGCTACGAAGCTTTAATGGCTCAAAGAAACGCCATTTTCGCGCAGCAGAGGCTGAGTTATTCCCGGCCGGCAGAAAGAGGCCAAAGCCATGAGTTTCTTCTTCCTCAGGAGTGGACATACTAAAGCAAACAAAACTACTGGAAGTTGAAAAAAAAAAGTGCTTTTTCATTGGGAAGATTGAAGTGTTCTTTCTTTTAGAATAGGGAACAATAAAGATATGAATTAAGGGTTGTAACTTAAAGATGGAAAAAGGATTTGTTTGCAGGTTTGTAGTTACCAGTTAGGTTTCATTAGATGGAGAACAGAGTAAAAATGCAGCGTTCATTCATCAGAAAGGGGGGAAACAGAGAAAAAGAGAGTAATTTATAGGAAAGTGGGGACTTAGGGACAGAGAGATATTGTAATAATTTTTGTGGGTTTCTTAATTGAAACATATAGCTATAGTATATAGCTATAGACCCTTCTAATATAAATAAACTATTTGTTGATTTATGTGTAGAAGCAAGAGCTTCTTATTTGTTGATAAACATTGGTTAGTATTAAAGTTTGAATCTTTAACTTTGTGATTTAATATATGTTCTTTTTTCCTCCAAAAAAATAGACAATCTTATTGGGAGCATGGCCATTCCCATGCCATGCGACCACGCCGACCGTACGTTTCTATGAATAGTTTTATGTTGGAGCAATGGGGCTGTCCTCTGTACTCGACATGAATGGCATCCACTTCAATCTGGATCTTGGATTTTGTTTCAACTTTGTTAGCATAAATCTAAATTAATCAATAACTAACATTCATTATAATAATGGCTTCAGATTATTCAACAAACATCAAATCCACATTATAGAAACAAGACATTATCACATGTTAGCATTATATTATCTTATCTTCTGCTGCTGCTGCTCTTGATAGAGGCTCCACTCTAACTGGTGCAGCAACTCAACCAAAAGTGTGAAATTCTTGCATTTCATGTTCAAATCCATCTTATCTAACTACAGTCCACTTTTCTTTATGCATAATTCTAGCAGTGATTTGATCAAAAGCTTGTCCAGTCTTTATGCTTCAGAATGAAGATTTCAAGCTTGTTGTGAAATTTACTCAACCTTCACTCTACCTTTTCTACTGTTTTCATATAAGTAGGCAAAAGCAAAAGATGTGCAAATTTTATGTGATTTGATAAACGGGTCGTTTAAGTATAAAAGAGAAATCTTACTCATATCTTACAGTGTTTGTGTTATGTCTGTTTGTAGTGTTCTAAGATCTTCAAAGAGAGCAGAGGAGGAAAAATTAGACTGCGATGCCACGGAGAACTCTTCTGATGCTATCTTCATCTGGGTTTGCGCCTATTGTGTTATGACCCTTGCTTACCATCCACTTTGCCACCCTCGTCAAGCCAAGCCACTACAATTCATGAAAGTGATATCAATAGGTGAAAGAAAAGGCCTCAAGCTATCAGTTTTCTTGTGGATGGAAAAAAAGGCAACTATCCATTATTGTATACAGAAACGATCATAAGCATTCATAATCCCAAGCCTCACAACTGAAAAGGAAGGACTTGAAGCAATTGACTTTGATCTAACTTTTCTT ATGGGTTTTTCATTTACCGGCGACTCTGTTTTTTTTTTTTTTNCGGCCATGGCTAGTTCTCCTCAGTCTACTCTTAGTGGGTTTGGGAGTTGGTCGGCTTGGAGCTCGGTGTCGAGCGACGGAAGCCCAAACGGGCCGTCTCAGGCGCCGTCTCCTCCGACCACTCCCTTCGGCGGCGATGAAGACACTTGGGATCTTATCTATGCTGCTGCAGGGCAAGTTGCGAGACTCAAAATGAACACTCAAAGAGATGGGATTATTGGTCCTTCTCAAAGTTCTTCAAAGCTTGCTTCTTCCATGAGAAACGCTGGATTTTACTCCCACCCTTCACAGTTCGGAACAGAGTCTCCGATTAATAAACAGGAAAGCTGTTTAAACTGGGGGAGACAAGTGACGGTTGAAAATCAACAGATCTATTGCGGAAGGGGAGATGTTCACCATGAACATGGGAATTTTGTTCGTGCTGTGGATTTTCCTCAATCCGCTTGGCCTTCTCTGCATCCCCATCACCGGAGAAACCCTTCTCAGCCTAGTACTCCCGCTGTATCTGCCGCCTACCACGGCAGCGGATCGGCCCCCAAAAAGGAGTGCACAGGTACTGGCGTCTTCTTGCCTCGCCGATACGACAACAACCCACCACAATCTCGCAAAAGAGCAGACTGTGGCTCGATTGCTCTGCTTCCAGGGAAGAACGTTCAGGACTTCAACCGATCTGTTCCCCAGATGACGTCAAATCGCCGCCTTCCACCGAGCTACGAAGCTTTAATGGCTCAAAGAAACGCCATTTTCGCGCAGCAGAGGCTGAGTTATTCCCGGCCGGCAGAAAGAGGCCAAAGCCATGAGTTTCTTCTTCCTCAGGAGTGGACATACTAA MGFSFTGDSVFFFFXAMASSPQSTLSGFGSWSAWSSVSSDGSPNGPSQAPSPPTTPFGGDEDTWDLIYAAAGQVARLKMNTQRDGIIGPSQSSSKLASSMRNAGFYSHPSQFGTESPINKQESCLNWGRQVTVENQQIYCGRGDVHHEHGNFVRAVDFPQSAWPSLHPHHRRNPSQPSTPAVSAAYHGSGSAPKKECTGTGVFLPRRYDNNPPQSRKRADCGSIALLPGKNVQDFNRSVPQMTSNRRLPPSYEALMAQRNAIFAQQRLSYSRPAERGQSHEFLLPQEWTY
BLAST of Cp4.1LG01g11010 vs. TrEMBL
Match: A0A0A0KQD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G189920 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-110 Identity = 207/276 (75.00%), Postives = 229/276 (82.97%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. TrEMBL
Match: W9S3V8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005867 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.7e-50 Identity = 143/314 (45.54%), Postives = 172/314 (54.78%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. TrEMBL
Match: M5XJR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006379mg PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.3e-46 Identity = 133/307 (43.32%), Postives = 162/307 (52.77%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. TrEMBL
Match: B9HHJ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06250g PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.7e-44 Identity = 138/327 (42.20%), Postives = 180/327 (55.05%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. TrEMBL
Match: A0A061FLH8_THECC (WAS/WASL-interacting protein family member 2, putative isoform 1 OS=Theobroma cacao GN=TCM_042642 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.2e-44 Identity = 130/307 (42.35%), Postives = 165/307 (53.75%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. TAIR10
Match: AT2G39870.1 (AT2G39870.1 unknown protein) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09 Identity = 88/277 (31.77%), Postives = 124/277 (44.77%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. NCBI nr
Match: gi|659129883|ref|XP_008464895.1| (PREDICTED: uncharacterized protein LOC103502654 [Cucumis melo]) HSP 1 Score: 416.8 bits (1070), Expect = 3.2e-113 Identity = 210/276 (76.09%), Postives = 230/276 (83.33%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. NCBI nr
Match: gi|449464456|ref|XP_004149945.1| (PREDICTED: uncharacterized protein LOC101215147 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 1.9e-110 Identity = 207/276 (75.00%), Postives = 229/276 (82.97%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. NCBI nr
Match: gi|703136256|ref|XP_010106106.1| (hypothetical protein L484_005867 [Morus notabilis]) HSP 1 Score: 207.2 bits (526), Expect = 3.8e-50 Identity = 143/314 (45.54%), Postives = 172/314 (54.78%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. NCBI nr
Match: gi|596000548|ref|XP_007218081.1| (hypothetical protein PRUPE_ppa006379mg [Prunus persica]) HSP 1 Score: 194.1 bits (492), Expect = 3.3e-46 Identity = 133/307 (43.32%), Postives = 162/307 (52.77%), Query Frame = 1
BLAST of Cp4.1LG01g11010 vs. NCBI nr
Match: gi|645255846|ref|XP_008233686.1| (PREDICTED: uncharacterized protein LOC103332718 [Prunus mume]) HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44 Identity = 134/310 (43.23%), Postives = 163/310 (52.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |