Cp4.1LG01g10340 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g10340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionElongator complex protein 6
LocationCp4.1LG01 : 6711393 .. 6715976 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCACATTAGGAACCAAACGAAAAATTACTATATATTTGGTTTCTCCTTTCTCGCTCTGCTCCGCCTGTCGCCGACCTAAAACCTCGAACCATCATGAGCCGAATGACTTCGAATTTGCTTGATGAAGCTATAGGTCTCGATGATTCTACGAGTCTCTCCCCTCTGGTCGGCCGTCTGTTGCTTGTTGAGGATTGTGTTGAAACCAGCGGCGCTTTTGTTCTTCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTTGTTCACTATGACCGCGTGCTCAGGAAACTGGTGCGATCTCGCTATTTATGCATGTGTGTGGATGTTTATAGCTTAGATTTTTTTGCTATTTGTTGGTTTGAGTTTGGCGACGGACTTTTTTCGATTTTGGTATGAGTTCCTATTGCTCACTTGAACTTGGTTGTTGATGAGAGGAACTGTGGTGGAAATTTATTACAAGATTATATAGCAGGACCAACGGAGAATTCTGAACTCCTCAAGGCTGCTATCAACATAATAAGTTTTAAGAATTACATATTTACGAGTTGCATAAAGAATTCGTTATTGGACGATTGACTGATATTCTTTTTAGTGGAATATAGTTTATGAAATTATTAAGCCTGATAACGATTTGATTATTGGCCTTTAGAAAATTAAGCTTATAATCACTAATCTTTCAATGGTAAAGAAATAAGCTCTTTTTTCAAGAACCAAATCGTTATTAAATGATGATTGATAAGCTTATAAAGAAACATTTGACTTATCTAGCTTTTAGTGATAAAAATTGACAATAATATCTTGATGTTGGATCTCTCTTCTCATTCATCTGTTATCTGTCGTGCTGAAATTCTGTTATTTAATTACTTTAATTTAGTGTTCAGAATGAGAGTATTCATCTGTAGACTATATTTTAATCAGGGGTGTAACTTAGCTGCTCAAAGGGACAGCCATAGGTTCTTTTTCTTAGACATGCTTACGGTGGGCTGTTCAGGTGAGAAAACCAGGTATAATATCATCATTTAAGCTTTTATCTTATTCCCCCTCCATTTTTTTTCGAACTTCTCATTCTTTTCTGCATCTGTTGCAGTAGCTTTATTTTCTACTTGTATAAATGATGATTTACTTACACTTAGAAGGGATTGGTTGCATATCCAGCTATTGATGAAGTAGGTTGCCCCCCACCCTTTCTACACTTGCAGCGAAGAATTTATTTTTCATAATTCATTGACCCTCCATTACTTCCTCATTACTGAGCTTGGATATCTGGATAACCATGAAATAAAGATAACTATTGGGTTTTTTTTTTCTTCTCAGTTTTGCTATAAAATAGAAAAATGTTTCCTCATCTTTTTAAATTTATCGTGTTTTTCATCTTTTCATTCTATTATTATTATTATTATTATTATTATTATTTTGGAGAAGAAACAAGAATTTTATTGATGAATGAAATGAACAAAAGAGGAAACAAAAACTTCCAAATATTCATAGTGGATAACAAAATATTCTTCTCGTAGCTAAAAGATTAGTGAGCCTAGTCCTTGAAGGATTTTGCACATTTACACTGACCGAAAGCATTAAAGAGAACCCAAGTCATTGAAAACGTGGCTGTTCCTCTCTTTCTAATGGGTCGATAAAAAGGTGTTGATAAGCTAGTTCCAAATGGTCCTCTTTTGAACCATGAAGTGTTGGCCCATGAGCATGTAGGAGAGGAATTCGCGAATGATGATAGGCCATGTAGCGTGCCTACCAAGGGCTTCTGAAACCAAGGACCAGAAGTGCCCAGCAAAGGAACAAGTGATAAAGAGGTGGCCTTGCAACTCTGTGTCCTTCCAGCAGAAAACACAGACTGATGAGGATAAGTTTTGATGCAGTAACTTCTTTTGTTGTTATTGGTGTTGATACTCTTGTGGGCTGAGTTTCCGAAAGAAAATCTTCGCTCTCCTACGGTATTTTCCATCACAAAGGCAATTGTAGAGGGGGTCTATGTCATGTTTTTGTTGTTTTGGCCATGTTGATTATAGGACTCCACCGAGAAAATGGTTGATGTTTCCATCAGCCAAACCCATCTATCCATAGCATTTGAAAGAATTACCGTTTCAAGCGATGCAGCAAGTAACATGGATAGCTGGAGATGAAAGAATTACCATTACTAATCTCATCTGATTCCATCTTTCTGAGATGAAAGCATATGGCTTATATGTTAAGTCTGTAAAGATTGAGGAACGATTGAGCCAATGAGCCATCACCAGTCCGTTGCTCATTCTAAAAGGATCTCTCTCTCCCATCACCAATTTTTGCTTTCCAAGGTCCTTAATACTGATGGATAGCTGGAGATATATGGCCAAGTGACTTTGGAAGAGAATTTCCTGGAAGGAGGATGCCGTTGATGGCAAGGGTCAGGTTAGTTATACTTAGACATAATAACCTGCCTCCAAAGGGTTTGTCTTTCATTAGTGAATCTCCAAATTCATTTGGCAAGTAGAGCTTCATTTTTTTCCTTTTACACTGCCAATGCCCAAGCCTCCAAGGTAAAGGGGCTTCTTGGTAATATCCCAACTAACATTGTGCATGCCTTTCTCCATCTTGGATTCTTGGGCCATTCCCAAAAGAAATTTGTGATGATCTTTTCATCTCGCCTGCCATTAAACAGAGACCAGTAATAAATGAGGAGATTGGAGAGTGTAGCATTTATAAGCATTTGATGGCCACCGTCATATATATATGTAGCATTTGTAATCCCTATTGTTGGGACATCATTCTGCATCATTTCATTCGATCAATGAAATCGTTTCCTGTCAAAGCAGAACCAAAAAAAAAAAAAAAAAGAACATTGGAGTATTTCCAATTATAGAGCTTTTTTGTCATGCGTTCCTTTTTGGTCCGAAAGGTGCTTGTTTTTTGGCTTTTCATTATGTATTTCATGGCACCAAATCTTTGATATGGCACAAGTTTTTTCTGCTACCAGATAGAAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGACTGTACTGTAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTCTGGAGGTTGCTGCCAATGGTTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGTAAGACCCTTTAAGCTTACTGAATTCTTCTCTTCTTCACATGTCCTTGTTATATTTAACCTCCAGTATTCATACTTTGCTCTTGCCACAGGGTTGTTCCATTATTGCACTTAGTCACGAAGATGTTTACCTGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGCCCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGGTGCCATTTCTTGCTTTTATAACTTTCATGTTAATCAGCTTGTTTTCTACGCCTAGTTATGTTTGAACTATTTCTCCTACATCTTCCTTGGTCAAGAATTGTGCAACAACTCTTCCCGATCTTAGGGCCTGTTTGGAGTGACTTTCTTAGTGCTAAAGTCACTCCAAACCATCATTCTAAACTGTTTTTAAGTATTAAAAAGTTGTTCCAAAGAGGCCCTTAGTTACCTATCATTTCCCCCAGATTTCTGGCACTATATGTGAGGGGTTGTTGATGACATGAACTCTTTCCCTGTAACAGTGCCTGTTTATACCAGGCTGTTTTAGGTGTAACCTCAGGTAGCATATGCTGTTGAGACTAAAGATACTATATATAATGCTAATAAATTTTTAAATATCAATTACATCATCAAGCTGCTTAGCATACTTTTTCCCGCTTTGTTGTTTGACCCGATTTTATTCACATTTGTTGCTGCCACTCATTGTTAGGGCGATCATGATCATAATCAGGTTTCGTTTTCCTCTCTGCAGCTGACAGTTTTGAACAAACCAGTCGGAGGCCTGCAAGAAAACTTAAGAAACAGAGTGCATAATTTTCAATTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGAGGAAAGTCTTGGGCAAGAAAAGTAGACAGATTTGATAATTATACCTTTTTGTGTAGTACCATTTTGGCTCTTAACCCGGTGAAGTTGCCCGACTTCGAGCATCTGTTGATACTGTTCGTGATGCAACTAGAAAGGCGCTCTATTGAGATCATCATGGACAGTATAGATTCCTTGCTCTACAGTCGATTTGTTCTGTGTGAAACCTACCTCTTTATTTGACATTATAACAAAGGGAAAAATTACTTACTATTTGCTATTTTCGTTTCCAAAGTCAGTATTGATAAATATGAACATTCAGTTATTGCAAATTGTCCAATAGCCGCTGATTTTTAGTTTTATCCTAACAGATAGTTTAAGAGTTTATAAGTTAAAATTTGGTTGTCTTTGGTATGCATTTTCAATTTGGTCCTAAATTTTTAGAATTTGATTTAAACCTTTAACATATGTCTTAATTGAACTGTGTTCAGGTTGGCTCGAGATCTAA

mRNA sequence

TACCACATTAGGAACCAAACGAAAAATTACTATATATTTGGTTTCTCCTTTCTCGCTCTGCTCCGCCTGTCGCCGACCTAAAACCTCGAACCATCATGAGCCGAATGACTTCGAATTTGCTTGATGAAGCTATAGGTCTCGATGATTCTACGAGTCTCTCCCCTCTGGTCGGCCGTCTGTTGCTTGTTGAGGATTGTGTTGAAACCAGCGGCGCTTTTGTTCTTCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTTGTTCACTATGACCGCGTGCTCAGGAAACTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCCATAGGTTCTTTTTCTTAGACATGCTTACGGTGGGCTGTTCAGATAGAAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGACTGTACTGTAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTCTGGAGGTTGCTGCCAATGGTTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATTATTGCACTTAGTCACGAAGATGTTTACCTGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGCCCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAACCAGTCGGAGGCCTGCAAGAAAACTTAAGAAACAGAGTGCATAATTTTCAATTTTACATCAAGGAAAATGGTTGGCTCGAGATCTAA

Coding sequence (CDS)

ATGAGCCGAATGACTTCGAATTTGCTTGATGAAGCTATAGGTCTCGATGATTCTACGAGTCTCTCCCCTCTGGTCGGCCGTCTGTTGCTTGTTGAGGATTGTGTTGAAACCAGCGGCGCTTTTGTTCTTCATCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTTGTTCACTATGACCGCGTGCTCAGGAAACTGGGGTGTAACTTAGCTGCTCAAAGGGACAGCCATAGGTTCTTTTTCTTAGACATGCTTACGGTGGGCTGTTCAGATAGAAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGACTGTACTGTAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTCTGGAGGTTGCTGCCAATGGTTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATTATTGCACTTAGTCACGAAGATGTTTACCTGGACATCGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGCCCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAACCAGTCGGAGGCCTGCAAGAAAACTTAAGAAACAGAGTGCATAATTTTCAATTTTACATCAAGGAAAATGGTTGGCTCGAGATCTAA

Protein sequence

MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYCKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENGWLEI
Homology
[Close]
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match: ELP6_ARATH (Elongator complex protein 6 OS=Arabidopsis thaliana GN=ELP6 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-69
Identity = 135/248 (54.44%), Postives = 181/248 (72.98%), Query Frame = 1 

Query: 7   NLLDEAIGLDDSTSL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAF 66
           NLLD A+G D+  ++ SPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A+IF+AF
Sbjct: 6   NLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDALIFLAF 65

Query: 67  SQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYCKIQRA 126
           ++ F HYDR+LRKLGCNLA  + ++R  F DML V CSD    E     +  L+ +IQ  
Sbjct: 66  ARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLFREIQET 125

Query: 127 VSALIQENKRHVTIVIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDV 186
           V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYCHTL+SE  CS++ L+HED+
Sbjct: 126 VRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVILNHEDI 185

Query: 187 YLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNF 246
           Y  +ERP  +LQM  LADV+IK  PLA+G+A DVHGQLTVLNK +    + + RN++ NF
Sbjct: 186 YASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSRNKLQNF 245

Query: 247 QFYIKENG 251
           QF IKENG
Sbjct: 246 QFRIKENG 252

[Close]
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match: ELP6_XENLA (Elongator complex protein 6 OS=Xenopus laevis GN=elp6 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 66/239 (27.62%), Postives = 124/239 (51.88%), Query Frame = 1 

Query: 25  VGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAFSQSFVHYDRVLRKLGCNLA 84
           +G+  L+ D   T G+F++HH L        +   V F+A  QSF HY+ V +KLG NL+
Sbjct: 18  LGKFTLLCDS-NTDGSFLVHHFLSYYL---RAGCRVCFVALVQSFSHYNIVAQKLGVNLS 77

Query: 85  AQRDSHRFFFLDML----TVGCSDRSGKETGEGV--------LVGLYCKIQRAVSALIQE 144
           + +D  +  FL+ L     +   D+S  E    +        L  LY  +  A++    +
Sbjct: 78  SAKDEGQLVFLEGLKSYTDLLFGDKSEAEETNPLCFLRAGSDLRPLYSFVSAALAPSAGQ 137

Query: 145 NKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH-EDVYLDIER 204
             +   +++DD+ +L ++   +S  VLDF+HYC  T+ ++   +++ L H  +   D E 
Sbjct: 138 PWKCPVLILDDLSVL-LSLGVTSLQVLDFMHYCRATVCTQYKGNVLCLVHGAEESGDEEN 197

Query: 205 PLILQ-MEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKE 249
            L+L+ + + + ++++   L+TG  KDVHGQL ++   V   +   +N+   +Q+ I++
Sbjct: 198 ELVLRSLSHQSHLILQAEGLSTGFCKDVHGQLKIIRGAVSSGKRG-KNQPEIYQYKIQD 250

[Close]
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match: ELP6_MOUSE (Elongator complex protein 6 OS=Mus musculus GN=Elp6 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15
Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 1 

Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAA 85
           G L L+ D  +T G+F++HH L     +   +  V F+A  QSF HY+ V +KLG +L A
Sbjct: 19  GTLTLLCDA-KTDGSFLVHHFLSFYLKA---NCKVCFVALVQSFSHYNIVGQKLGVSLTA 78

Query: 86  QRDSHRFFFLDMLTVGCSD-----------RSGKETGEGVLVGLYCKIQRAVSALIQENK 145
            RD  +  FL+ L                 +  +E G G L  LY  IQ  +     E  
Sbjct: 79  ARDRGQLVFLEGLKSSVEVLFHSQDEPHPLQFLREAGTGNLQSLYTFIQDTLKPADSEES 138

Query: 146 --RHVTIVIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSH--EDVYLDIE 205
             ++  +++D++ +L ++    +  VLDF+ YC  T+  E+  +++AL H  E    +  
Sbjct: 139 PWKYPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDTEGATDEGN 198

Query: 206 RPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVL 225
             L+  + + + ++++   LATG  KDVHGQL++L
Sbjct: 199 DTLLNGLSHQSHLILRAEGLATGFCKDVHGQLSIL 228

[Close]
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match: ELP6_RAT (Elongator complex protein 6 OS=Rattus norvegicus GN=Elp6 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.8e-14
Identity = 64/215 (29.77%), Postives = 109/215 (50.70%), Query Frame = 1 

Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAA 85
           G+L L+ D  +T G+F++HH L     +   +  V F+A  QSF HY+ V +KLG +L A
Sbjct: 19  GKLTLLCDA-KTDGSFLVHHFLSFYLKA---NCKVCFVALVQSFSHYNIVGQKLGVSLTA 78

Query: 86  QRDSHRFFFLDMLTVGCSD-----------RSGKETGEGVLVGLYCKIQRAVSALIQENK 145
            R+  +  FL+ L                 +  +E G G L  LY  IQ  +        
Sbjct: 79  ARERGQLVFLEGLKSSVEVLFHSQEEPHPLQFLREAGAGNLQSLYTFIQDTLKPADSGES 138

Query: 146 --RHVTIVIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERP 205
             +   +++D++ +L ++    +  VLDF+ YC  T+  E+  +++AL H+    + E  
Sbjct: 139 PWKCPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDTEGAEDEEN 198

Query: 206 LIL--QMEYLADVLIKVGPLATGIAKDVHGQLTVL 225
            IL   + + + ++++   LATG  KDVHGQL++L
Sbjct: 199 NILLNGLSHQSHLILRTQGLATGFCKDVHGQLSIL 228

[Close]
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match: ELP6_HUMAN (Elongator complex protein 6 OS=Homo sapiens GN=ELP6 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-13
Identity = 64/215 (29.77%), Postives = 109/215 (50.70%), Query Frame = 1 

Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAA 85
           G+L L+ D  +T G+F++HH L     +   +  V F+A  QSF HY  V +KLG +L  
Sbjct: 19  GKLTLLCDA-KTDGSFLVHHFLSFYLKA---NCKVCFVALIQSFSHYSIVGQKLGVSLTM 78

Query: 86  QRDSHRFFFLDML--TVGCSDRSGK---------ETGEGVLVGLYCKIQRAVSALIQENK 145
            R+  +  FL+ L   V    ++ K         E   G L  L+  ++ A+  +     
Sbjct: 79  ARERGQLVFLEGLKSAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEA 138

Query: 146 R--HVTIVIDDIPLLEVAANGSSNHVLDFLHYCH-TLTSEIGCSIIALSHEDVYLDIERP 205
           R  +  +++DD+ +L     G+   VLDF+HYC  T+  E+  +++ L H+    + E  
Sbjct: 139 RWTYPVLLVDDLSVLLSLGMGAV-AVLDFIHYCRATVCWELKGNMVVLVHDSGDAEDEEN 198

Query: 206 LIL--QMEYLADVLIKVGPLATGIAKDVHGQLTVL 225
            IL   + + + ++++   LATG  +DVHGQL +L
Sbjct: 199 DILLNGLSHQSHLILRAEGLATGFCRDVHGQLRIL 228

[Close]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match: A0A0A0KLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G176020 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-122
Identity = 222/250 (88.80%), Postives = 232/250 (92.80%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEAIG DD T   PL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSN V
Sbjct: 1   MDRMTSNLLDEAIGFDDPT---PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFSQSF+HYDR+LRKLGCNLAAQRDS RF F DMLT+GCSDRSGKETGEGVLVGLYC
Sbjct: 61  IFLAFSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYC 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQRAV ALIQENK+HVTIVIDDI LLEVAANGSSNHVLDFLHYCHTL SE+GCSIIAL 
Sbjct: 121 KIQRAVHALIQENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALD 180

Query: 181 HEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVH 240
           HEDVY+DIERPL LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPV GLQ+ LRNRV 
Sbjct: 181 HEDVYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENG 251
           NFQFYIKENG
Sbjct: 241 NFQFYIKENG 247

[Close]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match: B9HM10_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04620g PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.1e-79
Identity = 147/250 (58.80%), Postives = 186/250 (74.40%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M   + NLLDEA+GLD  T   PL G+++L+EDCVETSG FVLH LLKR  SS   +N V
Sbjct: 1   MENRSLNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFS    HYDR+LRKLGCNL AQR++ RFFF DML + C D    +TG+G    LY 
Sbjct: 61  IFLAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYW 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQ  + AL + NK H TI+IDD+ L+EVAA+GSS+HVL+F+HYCHTLTSE+GCS+I L+
Sbjct: 121 KIQNTICALPENNKNHATIMIDDMSLMEVAAHGSSDHVLNFMHYCHTLTSELGCSLITLN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y  +ERP  +LQ +YL DVLIK  PLATG+A DVHGQLTVLN+    ++ + +N++
Sbjct: 181 HEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKI 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 250

[Close]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match: A0A067LNT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06650 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.0e-78
Identity = 154/252 (61.11%), Postives = 192/252 (76.19%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDD-STSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60
           M   T NLLDEA+GL+  S    PL G+++L+ED VETSG+F+LHHL+KR    P+SSN 
Sbjct: 1   MEHRTLNLLDEALGLNQQSQPWLPLQGKVVLIEDSVETSGSFLLHHLIKRILY-PNSSNV 60

Query: 61  VIFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLY 120
           +IF+AFS  F HYDR+LRKLGCNL AQRDS RFFF DML + C D +  +T E     LY
Sbjct: 61  IIFLAFSYPFSHYDRILRKLGCNLGAQRDS-RFFFFDMLALQCPDGNQGKTIEDGFFALY 120

Query: 121 CKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIAL 180
            KIQ+ + AL +  K +VTI+IDD+ L+EVAA GSS+HVLDFLHYCHTLTS+ GCS++ L
Sbjct: 121 EKIQKIICALPENYKTNVTIMIDDVSLMEVAAYGSSDHVLDFLHYCHTLTSDFGCSLVTL 180

Query: 181 SHEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNR 240
           +HED+Y  +ERP LILQMEYLADVL+K  PLATG+A DVHGQLTV+N  +   Q NL+N+
Sbjct: 181 NHEDIYSSMERPTLILQMEYLADVLMKTEPLATGLAADVHGQLTVVNSGICSAQGNLKNK 240

Query: 241 VHNFQFYIKENG 251
           + NFQF +KENG
Sbjct: 241 ISNFQFVLKENG 250

[Close]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match: A0A061FP59_THECC (Elongator protein 6, putative isoform 1 OS=Theobroma cacao GN=TCM_043037 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-76
Identity = 149/250 (59.60%), Postives = 190/250 (76.00%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M++ +SNLLDEA+GLD S    PL GR++ +ED VETSG+FVLHH+LKR+ S P+SSN  
Sbjct: 1   MNQRSSNLLDEALGLDQSIEPWPLRGRIVAIEDQVETSGSFVLHHILKRSLS-PNSSNVS 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           I IAFSQ F HYDRVLRKLGCNL  QRD++RFFF DML + C       + E  L+ LY 
Sbjct: 61  ILIAFSQPFSHYDRVLRKLGCNLVTQRDNNRFFFFDMLMLQCPGGDEGISPECGLIALYG 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KI + + AL + + ++VTI+IDD+ L+EVAANGSS++VLDF+HYC TLT+E  CS+IAL+
Sbjct: 121 KIYKTIVALPEVSSKNVTIIIDDLSLMEVAANGSSDYVLDFMHYCRTLTTEFDCSLIALN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y   +RP  +LQMEYLAD+LIK  PLATG+A DVHGQLTVLNK +   Q + RN++
Sbjct: 181 HEDIYSSADRPTFLLQMEYLADILIKAEPLATGLASDVHGQLTVLNKGMNYRQGSSRNKI 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 249

[Close]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match: A0A0D2SWA3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G203600 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 151/250 (60.40%), Postives = 187/250 (74.80%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M++ +SNLLDEA+GLD      PL GR++ +ED VETSG+FVLHHLLKR+ S P+SSN  
Sbjct: 1   MNQRSSNLLDEALGLDQVIEPWPLRGRVVAIEDQVETSGSFVLHHLLKRSLS-PNSSNVT 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IFIAFSQ F HYDR+LRKLGCNL +QRD+ RFFF DML + C D     T EG L+ LY 
Sbjct: 61  IFIAFSQPFSHYDRILRKLGCNLVSQRDNSRFFFFDMLKLQCPDGDEGITPEGGLIALYG 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KI + +SAL + + ++V+I+IDD+ L+EVAANGSS++VLDFLHYC TLTSE  CS+I L+
Sbjct: 121 KIHKTISALPEISWKNVSIIIDDLSLMEVAANGSSDYVLDFLHYCRTLTSEFDCSLITLN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y   +RP   +QMEYLAD+LIK  PLATG+A DVHGQLTV NK         RN+V
Sbjct: 181 HEDIYSSEDRPTFFIQMEYLADILIKAEPLATGLATDVHGQLTVSNKG--------RNKV 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 241

[Close]
BLAST of Cp4.1LG01g10340 vs. TAIR10
Match: AT4G10090.1 (AT4G10090.1 elongator protein 6)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-70
Identity = 135/248 (54.44%), Postives = 181/248 (72.98%), Query Frame = 1 

Query: 7   NLLDEAIGLDDSTSL-SPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFIAF 66
           NLLD A+G D+  ++ SPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A+IF+AF
Sbjct: 6   NLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDALIFLAF 65

Query: 67  SQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYCKIQRA 126
           ++ F HYDR+LRKLGCNLA  + ++R  F DML V CSD    E     +  L+ +IQ  
Sbjct: 66  ARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLFREIQET 125

Query: 127 VSALIQENKRHVTIVIDDIPLLEVAANGS-SNHVLDFLHYCHTLTSEIGCSIIALSHEDV 186
           V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYCHTL+SE  CS++ L+HED+
Sbjct: 126 VRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLVILNHEDI 185

Query: 187 YLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGL-QENLRNRVHNF 246
           Y  +ERP  +LQM  LADV+IK  PLA+G+A DVHGQLTVLNK +    + + RN++ NF
Sbjct: 186 YASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSSRNKLQNF 245

Query: 247 QFYIKENG 251
           QF IKENG
Sbjct: 246 QFRIKENG 252

[Close]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match: gi|778700815|ref|XP_011654922.1| (PREDICTED: elongator complex protein 6 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 2.5e-122
Identity = 222/250 (88.80%), Postives = 232/250 (92.80%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEAIG DD T   PL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSN V
Sbjct: 1   MDRMTSNLLDEAIGFDDPT---PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFSQSF+HYDR+LRKLGCNLAAQRDS RF F DMLT+GCSDRSGKETGEGVLVGLYC
Sbjct: 61  IFLAFSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYC 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQRAV ALIQENK+HVTIVIDDI LLEVAANGSSNHVLDFLHYCHTL SE+GCSIIAL 
Sbjct: 121 KIQRAVHALIQENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIALD 180

Query: 181 HEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVH 240
           HEDVY+DIERPL LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPV GLQ+ LRNRV 
Sbjct: 181 HEDVYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENG 251
           NFQFYIKENG
Sbjct: 241 NFQFYIKENG 247

[Close]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match: gi|659090090|ref|XP_008445832.1| (PREDICTED: elongator complex protein 6 [Cucumis melo])

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119
Identity = 217/250 (86.80%), Postives = 231/250 (92.40%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RM SNLLD AIG DD T+ SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSNAV
Sbjct: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFSQSFVHYDR+LRKLGCNLAAQRD+ RF F DMLT+GCSDRSGKET EGVLVGLYC
Sbjct: 61  IFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLYC 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQRAV ALIQENK+HVTIVIDDI LLEVAANGSSN VLDFLHYCHTL SE+GCSII+L 
Sbjct: 121 KIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIISLD 180

Query: 181 HEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRVH 240
           HEDVY+DI+RPL LQ+EYLADVLIKVGPLATGIAKDVHGQLTVLNKPV GLQ+ LRNRV 
Sbjct: 181 HEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRVQ 240

Query: 241 NFQFYIKENG 251
           NFQFYIKENG
Sbjct: 241 NFQFYIKENG 250

[Close]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match: gi|743943173|ref|XP_011016085.1| (PREDICTED: elongator complex protein 6-like [Populus euphratica])

HSP 1 Score: 303.9 bits (777), Expect = 2.6e-79
Identity = 148/250 (59.20%), Postives = 185/250 (74.00%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M     NLLDEA+GLD  T   PL G+++L+EDCVETSG FVLH LLKR  SS   +N V
Sbjct: 1   MENRALNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFS    HYDR+LRKLGCNL AQR++ RFFF DML + C D    +TG+G    LY 
Sbjct: 61  IFLAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYW 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQ  + AL + NK H TI+IDD+ L+EVAA+GSS+HVLDF+HYCHTLTSE+GCS+I L+
Sbjct: 121 KIQNTICALPENNKNHATIMIDDMSLMEVAAHGSSDHVLDFMHYCHTLTSELGCSLIILN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y  +ERP  +LQ +YL DVLIK  PLATG+A DVHGQLTVLN+    ++ + +N++
Sbjct: 181 HEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKI 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 250

[Close]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match: gi|224100883|ref|XP_002312051.1| (hypothetical protein POPTR_0008s04620g [Populus trichocarpa])

HSP 1 Score: 302.8 bits (774), Expect = 5.8e-79
Identity = 147/250 (58.80%), Postives = 186/250 (74.40%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M   + NLLDEA+GLD  T   PL G+++L+EDCVETSG FVLH LLKR  SS   +N V
Sbjct: 1   MENRSLNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFS    HYDR+LRKLGCNL AQR++ RFFF DML + C D    +TG+G    LY 
Sbjct: 61  IFLAFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYW 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQ  + AL + NK H TI+IDD+ L+EVAA+GSS+HVL+F+HYCHTLTSE+GCS+I L+
Sbjct: 121 KIQNTICALPENNKNHATIMIDDMSLMEVAAHGSSDHVLNFMHYCHTLTSELGCSLITLN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y  +ERP  +LQ +YL DVLIK  PLATG+A DVHGQLTVLN+    ++ + +N++
Sbjct: 181 HEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKI 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 250

[Close]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match: gi|743779885|ref|XP_011008884.1| (PREDICTED: elongator complex protein 6-like [Populus euphratica])

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 147/250 (58.80%), Postives = 184/250 (73.60%), Query Frame = 1 

Query: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M     NLLDEA+GLD  T   PL G+++L+EDCVETSG  VLH LLKR  SS   +N V
Sbjct: 1   MENRALNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCLVLHQLLKRTLSSQSPNNTV 60

Query: 61  IFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLYC 120
           IF+AFS    HYDR+LRKLGCNL AQR++ RFFF DML + C D    +TG+G    LY 
Sbjct: 61  IFLAFSHPLSHYDRLLRKLGCNLVAQRENGRFFFFDMLKLPCPDEKEGKTGKGGFTALYW 120

Query: 121 KIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALS 180
           KIQ  + AL + NK H TI+IDD+ L+EVAA+GSS+HVLDF+HYCHTLTSE+GCS+I L+
Sbjct: 121 KIQNTICALPENNKNHATIMIDDMSLMEVAAHGSSDHVLDFMHYCHTLTSELGCSLIILN 180

Query: 181 HEDVYLDIERP-LILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240
           HED+Y  +ERP  +LQ +YL DVLIK  PLATG+A DVHGQLTVLN+    ++ + +N++
Sbjct: 181 HEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGSSKNKI 240

Query: 241 HNFQFYIKEN 250
            NF F +KEN
Sbjct: 241 SNFHFKVKEN 250

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g10340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ELP6_ARATH1.9e-6954.44Elongator complex protein 6 OS=Arabidopsis thaliana GN=ELP6 PE=1 SV=1[more]
ELP6_XENLA2.0e-1527.62Elongator complex protein 6 OS=Xenopus laevis GN=elp6 PE=2 SV=1[more]
ELP6_MOUSE5.9e-1530.23Elongator complex protein 6 OS=Mus musculus GN=Elp6 PE=2 SV=1[more]
ELP6_RAT3.8e-1429.77Elongator complex protein 6 OS=Rattus norvegicus GN=Elp6 PE=2 SV=1[more]
ELP6_HUMAN5.6e-1329.77Elongator complex protein 6 OS=Homo sapiens GN=ELP6 PE=1 SV=1[more]
BLAST of Cp4.1LG01g10340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLF1_CUCSA1.7e-12288.80Uncharacterized protein OS=Cucumis sativus GN=Csa_5G176020 PE=4 SV=1[more]
B9HM10_POPTR4.1e-7958.80Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04620g PE=4 SV=1[more]
A0A067LNT6_JATCU2.0e-7861.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06650 PE=4 SV=1[more]
A0A061FP59_THECC1.1e-7659.60Elongator protein 6, putative isoform 1 OS=Theobroma cacao GN=TCM_043037 PE=4 SV... [more]
A0A0D2SWA3_GOSRA1.2e-7560.40Uncharacterized protein OS=Gossypium raimondii GN=B456_010G203600 PE=4 SV=1[more]
BLAST of Cp4.1LG01g10340 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10090.11.1e-7054.44 elongator protein 6[more]
BLAST of Cp4.1LG01g10340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778700815|ref|XP_011654922.1|2.5e-12288.80PREDICTED: elongator complex protein 6 [Cucumis sativus][more]
gi|659090090|ref|XP_008445832.1|2.6e-11986.80PREDICTED: elongator complex protein 6 [Cucumis melo][more]
gi|743943173|ref|XP_011016085.1|2.6e-7959.20PREDICTED: elongator complex protein 6-like [Populus euphratica][more]
gi|224100883|ref|XP_002312051.1|5.8e-7958.80hypothetical protein POPTR_0008s04620g [Populus trichocarpa][more]
gi|743779885|ref|XP_011008884.1|1.3e-7858.80PREDICTED: elongator complex protein 6-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018627ELP6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050789 regulation of biological process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0033588 Elongator holoenzyme complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g10340.1Cp4.1LG01g10340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018627Elongation complex protein 6PFAMPF09807ELP6coord: 23..247
score: 3.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 58..205
score: 1.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 51..204
score: 4.4
NoneNo IPR availablePANTHERPTHR16184FAMILY NOT NAMEDcoord: 14..250
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g10340Cucsa.165890Cucumber (Gy14) v1cgycpeB0458
Cp4.1LG01g10340CmaCh04G012350Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g10340CmoCh04G013080Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g10340Cla020085Watermelon (97103) v1cpewmB451
Cp4.1LG01g10340Csa5G176020Cucumber (Chinese Long) v2cpecuB437
Cp4.1LG01g10340MELO3C011718Melon (DHL92) v3.5.1cpemeB376
Cp4.1LG01g10340ClCG02G013770Watermelon (Charleston Gray)cpewcgB376
Cp4.1LG01g10340CSPI05G08970Wild cucumber (PI 183967)cpecpiB437
Cp4.1LG01g10340Lsi04G008260Bottle gourd (USVL1VR-Ls)cpelsiB358
Cp4.1LG01g10340MELO3C011718.2Melon (DHL92) v3.6.1cpemedB436
Cp4.1LG01g10340CsaV3_5G006400Cucumber (Chinese Long) v3cpecucB0541
Cp4.1LG01g10340Bhi07G000864Wax gourdcpewgoB0556
Cp4.1LG01g10340CsGy5G006330Cucumber (Gy14) v2cgybcpeB646
Cp4.1LG01g10340Carg02073Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB212
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB289
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB388
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB402
Cp4.1LG01g10340Cucurbita pepo (Zucchini)cpecpeB410
Cp4.1LG01g10340Cucurbita maxima (Rimu)cmacpeB314
Cp4.1LG01g10340Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g10340Cucurbita moschata (Rifu)cmocpeB277
Cp4.1LG01g10340Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g10340Wild cucumber (PI 183967)cpecpiB450
Cp4.1LG01g10340Cucumber (Chinese Long) v2cpecuB451
Cp4.1LG01g10340Bottle gourd (USVL1VR-Ls)cpelsiB333
Cp4.1LG01g10340Watermelon (97103) v1cpewmB380
Cp4.1LG01g10340Melon (DHL92) v3.5.1cpemeB356
Cp4.1LG01g10340Cucumber (Gy14) v2cgybcpeB363
Cp4.1LG01g10340Cucumber (Gy14) v2cgybcpeB517
Cp4.1LG01g10340Cucumber (Gy14) v2cgybcpeB809
Cp4.1LG01g10340Melon (DHL92) v3.6.1cpemedB475
Cp4.1LG01g10340Silver-seed gourdcarcpeB1208
Cp4.1LG01g10340Cucumber (Chinese Long) v3cpecucB0486
Cp4.1LG01g10340Cucumber (Chinese Long) v3cpecucB0510
Cp4.1LG01g10340Cucumber (Chinese Long) v3cpecucB0551
Cp4.1LG01g10340Cucumber (Chinese Long) v3cpecucB0578
Cp4.1LG01g10340Wax gourdcpewgoB0488
Cp4.1LG01g10340Wax gourdcpewgoB0542