Cp4.1LG01g10270 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGAATCTCCAAGAAATCCAATCCAACAAATCCCCTTTCCATCCCATCTCAATTGGTTTTACTCCTCTCCCTGCAGAAACCTCTCCAATTGGTTGCGCTCCATTCCCGCCACCGCCGAACGCCGCAAGTCCTCTCCATTTCCCGCAGCCGGACCTTCCCAACCGCCGCCTCCGGTTGCGCTTGGATGCGGAGAGAGAAATGCAGTGACTTATGGGGGTGGAGGAGGTGGAGTTGGACGGTGGACGTTAGGACCACGCGCTCGACTCTTGTACGATAAGGGGCCTTCTAAAAATTTAGGGTTTTTGTAGTGGATATAAATGTTTTTCGATGGGGTCTAAAAGGTCTTATACCAATTCGACCGCAAAAAGAGGAGGGGTTTTCGGGTCAGGGTCAGGGTCAGGTTCTGATTCTGCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGCTACGGAGAGAAAGGACCATAACCATGGCTGGTTCCAAGATGACTTGCACATCGAGACTCCATCGCCATTAATGCACCAACACGAACCACAACATTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCTCGAGTAGCCGCTGTCCCGATATTTGTCTGCAGTATGTTTTAAATTTCTGCCTCTTGTTAATCGCAATTATGTCTGTTTTAATCATCTGATTGAAATGAATCGATACGCCACGAACCGATCTCTAAATGTTGTGCGTTGCGTGTTACGATGTGTATTTGGCCTGACATTGGCTCCGATCAAAGGCGTAGGGCATCTGGATTGTTATCTCTGGATTTGTTTTGGAAATCGGTGTTACCAGTTCCTGTTTGTGTTTGTTCTAACGATTGTTTAAGGCGTTTCATCCATAAATGCGTTGCGTTACGTTACGTTTTATTCCAAGGAAAATTTATAGCTATTCTTTTTGCTTTCTTTTGTGTAAATATGGGTTAATTTCACTCTTTGATTTAGTTCTCTTATCATTGGACTAATTGCTCTACTGCAACTGCTTATGAACTAATTGCCTGTAACTAATGATTCTAGAGCTTCTTATTATGCAAAATCTTCCAATGATTGTGGATTTCAAGGATTTATGGTGGCAGCATGTTATTAAAATTAGGCTGCTGTATCAAGTCTAATGCATTTGGTTGTAAAAAAACACCCATTTTAGTGATTGGTTGTTTGTTCATAAAAAAGGAAATCACACGTTTCTGATTCTAACCTTCTATGTTGGTGATTGGTTTGTTCATCTCATAACCGGTTTCCTCTAGATTGTAGAAATCAAAGTGAAAGTTAATTTTAGTGTTCTAATCATAACACTATATGCTTCTGTTATTAGCCTTCTATGTTGATAACTGGTGGGGAACAACTGCAACAACTAGTATATTCATTGCTGCTGCAGTTACCGACTGGCTCGATGGTTATATTGCTCGGAAGGTATGGTCTTCGTATGTTTGTAGTCAATATCTAATATGGTGGGAGAAGCCTGTGTTGGCTGTCCATTTATAGCTGTCTCAATCAGTTTGGTCTTAATCTTTAAATTCATTTATCAGATGAGGTTGGGTTCGGCTTTCGGTGCGTTTCTTGATCCAGTAGCTGATAAGGTTGGTTCTTCTTCTCTGTTTAGGTTCTCAATCATGAGTTTGATCTTGTTAAGTTCAGATATGGTTCAAACATTATTAATCAACCATCGTTCCTTCACTACAGCTTATGGTTGCTGCTACACTGATCCTACTATGCACACAACCCTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATAGCAATTATTGGCAGGGAGGTAATTAGACTCCCTTGGTAGCCACTTACCATCTTGTTTGCCTGATATCAACCATTTTGATTCAATACTTATAGATTTTATGTTTTTTTGTTAAACCTTCAAATTGAGAATGCTTACTTTAATTGTTAGTTTGCTCCTTATGTACATGAGGTATGGCACACTGCTTTTCTTTTTCTTTGATTCATTTATGAATTTATAACGGATATCGTATCGATCGATTTGAATATGTAGATAACCATGTCGGCCGTACGAGAATGGGCTGCTTCCCAAAATGGTAAACTTTTAGAGGTTTGTATATACCAAAATAAAACCAATTCAGTTTGTTTGAATTGACAAAGCTTTTAACTTGGGGAGCTTAAAATTTGAGAAACACAGGCTGTGGCCGTAAACAACTTGGGGAAGTGGAAAACAGCGACACAGATGATTGCACTAACCACACTTCTGGCTAGCCGAGACAGCAGGTAAGGTTCATTTTCTTTAGTTCTTCGTTAACCATCTTTCACAGCTTAGACGACACAAGAAACTCTCTTGAATATATTTCATTTTTCTTTTCCGTTAGTCTTGGAGGATCTGGAGTTGTAGTAGCAACTGGTGTGGTGTTGTTGTACATATCAGCTTGGCTTGCTTTGTGGTCACTATTTGTTTATTCCAGAAAGATCTCGAAAGTTTTGTTTCGCTAGCACATCCCGACCCGACATTTCAATTCTCTTCATTTTTGTTGGACGACACCTGCAAAAGCTAAAACGAACCGATTGCTTAATCCGTAAGTGGTGATGCCCAAAATTTAGAGATTGTTGAAGCCATTTTCACAAGTAAGTTGCAATCTATGGAGGGTTTCTAAGAAGACAGCAGCCATAGTTACTGACCTGCAGAAGCTGGAAGTTTGGAATGAGGTCTGGATGTAACTATAAGTTTACTAACTACTTAAAAGAGTAATTATAAAGTGGCATTTTATCTCATCATGCTCATTGATATTCAAATTCAATCTCTTTGACTCTTCTTGTCAATGCTGAGATAGACCTGATATTTTTCAGGGGTGCTAAGTTTTCAAGTTTTGTAGATATAAATACATATATTTATATTTATATTTTGTCGTTTACATTTTTAGATTGAATTTATTGGAACTTCTTTGATATATATATTTCTATTTGTTTGGAAGATACACTATCTAATTG ATGAAAAGAATCTCCAAGAAATCCAATCCAACAAATCCCCTTTCCATCCCATCTCAATTGGTTTTACTCCTCTCCCTGCAGAAACCTCTCCAATTGGTTGCGCTCCATTCCCGCCACCGCCGAACGCCGCAAGTCCTCTCCATTTCCCGCAGCCGGACCTTCCCAACCGCCGCCTCCGGTTGCGCTTGGATGCGGAGAGAGAAATGCAGTGACTTATGGGGGTGGAGGAGGTCTTATACCAATTCGACCGCAAAAAGAGGAGGGGTTTTCGGGTCAGGGTCAGGGTCAGGTTCTGATTCTGCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGCTACGGAGAGAAAGGACCATAACCATGGCTGGTTCCAAGATGACTTGCACATCGAGACTCCATCGCCATTAATGCACCAACACGAACCACAACATTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCTCGAGTAGCCGCTGTCCCGATATTTGTCTGCACCTTCTATGTTGATAACTGGTGGGGAACAACTGCAACAACTAGTATATTCATTGCTGCTGCAGTTACCGACTGGCTCGATGGTTATATTGCTCGGAAGATGAGGTTGGGTTCGGCTTTCGGTGCGTTTCTTGATCCAGTAGCTGATAAGCTTATGGTTGCTGCTACACTGATCCTACTATGCACACAACCCTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATAGCAATTATTGGCAGGGAGATAACCATGTCGGCCGTACGAGAATGGGCTGCTTCCCAAAATGGTAAACTTTTAGAGGCTGTGGCCGTAAACAACTTGGGGAAGTGGAAAACAGCGACACAGATGATTGCACTAACCACACTTCTGGCTAGCCGAGACAGCAGTCTTGGAGGATCTGGAGTTGTAGTAGCAACTGGTGTGGTGTTGTTGTACATATCAGCTTGGCTTGCTTTGTGGTCACTATTTGTTTATTCCAGAAAGATCTCGAAAGTTTTGTTTCGCTAGCACATCCCGACCCGACATTTCAATTCTCTTCATTTTTGTTGGACGACACCTGCAAAAGCTAAAACGAACCGATTGCTTAATCCGTAAGTGGTGATGCCCAAAATTTAGAGATTGTTGAAGCCATTTTCACAAGTAAGTTGCAATCTATGGAGGGTTTCTAAGAAGACAGCAGCCATAGTTACTGACCTGCAGAAGCTGGAAGTTTGGAATGAGGTCTGGATGTAACTATAAGTTTACTAACTACTTAAAAGAGTAATTATAAAGTGGCATTTTATCTCATCATGCTCATTGATATTCAAATTCAATCTCTTTGACTCTTCTTGTCAATGCTGAGATAGACCTGATATTTTTCAGGGGTGCTAAGTTTTCAAGTTTTGTAGATATAAATACATATATTTATATTTATATTTTGTCGTTTACATTTTTAGATTGAATTTATTGGAACTTCTTTGATATATATATTTCTATTTGTTTGGAAGATACACTATCTAATTG ATGAAAAGAATCTCCAAGAAATCCAATCCAACAAATCCCCTTTCCATCCCATCTCAATTGGTTTTACTCCTCTCCCTGCAGAAACCTCTCCAATTGGTTGCGCTCCATTCCCGCCACCGCCGAACGCCGCAAGTCCTCTCCATTTCCCGCAGCCGGACCTTCCCAACCGCCGCCTCCGGTTGCGCTTGGATGCGGAGAGAGAAATGCAGTGACTTATGGGGGTGGAGGAGGTCTTATACCAATTCGACCGCAAAAAGAGGAGGGGTTTTCGGGTCAGGGTCAGGGTCAGGTTCTGATTCTGCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGCTACGGAGAGAAAGGACCATAACCATGGCTGGTTCCAAGATGACTTGCACATCGAGACTCCATCGCCATTAATGCACCAACACGAACCACAACATTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCTCGAGTAGCCGCTGTCCCGATATTTGTCTGCACCTTCTATGTTGATAACTGGTGGGGAACAACTGCAACAACTAGTATATTCATTGCTGCTGCAGTTACCGACTGGCTCGATGGTTATATTGCTCGGAAGATGAGGTTGGGTTCGGCTTTCGGTGCGTTTCTTGATCCAGTAGCTGATAAGCTTATGGTTGCTGCTACACTGATCCTACTATGCACACAACCCTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATAGCAATTATTGGCAGGGAGATAACCATGTCGGCCGTACGAGAATGGGCTGCTTCCCAAAATGGTAAACTTTTAGAGGCTGTGGCCGTAAACAACTTGGGGAAGTGGAAAACAGCGACACAGATGATTGCACTAACCACACTTCTGGCTAGCCGAGACAGCAGTCTTGGAGGATCTGGAGTTGTAGTAGCAACTGGTGTGGTGTTGTTGTACATATCAGCTTGGCTTGCTTTGTGGTCACTATTTGTTTATTCCAGAAAGATCTCGAAAGTTTTGTTTCGCTAG MKRISKKSNPTNPLSIPSQLVLLLSLQKPLQLVALHSRHRRTPQVLSISRSRTFPTAASGCAWMRREKCSDLWGWRRSYTNSTAKRGGVFGSGSGSGSDSAASPPSAGSEFVADMATERKDHNHGWFQDDLHIETPSPLMHQHEPQHSKLLTLPTILTLARVAAVPIFVCTFYVDNWWGTTATTSIFIAAAVTDWLDGYIARKMRLGSAFGAFLDPVADKLMVAATLILLCTQPLEVSVFGHVPWLLTLPSIAIIGREITMSAVREWAASQNGKLLEAVAVNNLGKWKTATQMIALTTLLASRDSSLGGSGVVVATGVVLLYISAWLALWSLFVYSRKISKVLFR
BLAST of Cp4.1LG01g10270 vs. Swiss-Prot
Match: PGPS1_ARATH (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=PGPS1 PE=1 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 4.2e-80 Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. Swiss-Prot
Match: PGPS2_ARATH (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 OS=Arabidopsis thaliana GN=PGPS2 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.5e-77 Identity = 154/198 (77.78%), Postives = 172/198 (86.87%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. Swiss-Prot
Match: CLS_ORYSJ (Cardiolipin synthase (CMP-forming), mitochondrial OS=Oryza sativa subsp. japonica GN=Os03g0283600 PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 3.1e-75 Identity = 145/202 (71.78%), Postives = 170/202 (84.16%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. Swiss-Prot
Match: PGSA_SODGM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Sodalis glossinidius (strain morsitans) GN=pgsA PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30 Identity = 83/185 (44.86%), Postives = 110/185 (59.46%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. Swiss-Prot
Match: PGSA_PECAS (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=pgsA PE=3 SV=3) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-30 Identity = 85/183 (46.45%), Postives = 113/183 (61.75%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TrEMBL
Match: A0A0A0KNN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G177040 PE=3 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 6.9e-130 Identity = 248/278 (89.21%), Postives = 259/278 (93.17%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TrEMBL
Match: V4TCV5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031930mg PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 4.5e-89 Identity = 189/270 (70.00%), Postives = 214/270 (79.26%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TrEMBL
Match: A0A067FXD6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018312mg PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 4.5e-89 Identity = 189/270 (70.00%), Postives = 214/270 (79.26%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TrEMBL
Match: B9SGD6_RICCO (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative OS=Ricinus communis GN=RCOM_0744550 PE=3 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 3.2e-87 Identity = 191/271 (70.48%), Postives = 218/271 (80.44%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TrEMBL
Match: A0A067LCC3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06647 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 3.6e-86 Identity = 187/275 (68.00%), Postives = 217/275 (78.91%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TAIR10
Match: AT2G39290.1 (AT2G39290.1 phosphatidylglycerolphosphate synthase 1) HSP 1 Score: 299.7 bits (766), Expect = 2.4e-81 Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TAIR10
Match: AT3G55030.1 (AT3G55030.1 phosphatidylglycerolphosphate synthase 2) HSP 1 Score: 290.4 bits (742), Expect = 1.4e-78 Identity = 154/198 (77.78%), Postives = 172/198 (86.87%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. TAIR10
Match: AT4G04870.1 (AT4G04870.1 cardiolipin synthase) HSP 1 Score: 58.5 bits (140), Expect = 9.2e-09 Identity = 33/123 (26.83%), Postives = 69/123 (56.10%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. NCBI nr
Match: gi|449451699|ref|XP_004143599.1| (PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Cucumis sativus]) HSP 1 Score: 471.9 bits (1213), Expect = 9.8e-130 Identity = 248/278 (89.21%), Postives = 259/278 (93.17%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. NCBI nr
Match: gi|659090084|ref|XP_008445828.1| (PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 4.1e-128 Identity = 246/278 (88.49%), Postives = 257/278 (92.45%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. NCBI nr
Match: gi|1009120797|ref|XP_015877118.1| (PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [Ziziphus jujuba]) HSP 1 Score: 351.3 bits (900), Expect = 1.9e-93 Identity = 195/262 (74.43%), Postives = 215/262 (82.06%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. NCBI nr
Match: gi|567887306|ref|XP_006436175.1| (hypothetical protein CICLE_v10031930mg [Citrus clementina]) HSP 1 Score: 336.3 bits (861), Expect = 6.5e-89 Identity = 189/270 (70.00%), Postives = 214/270 (79.26%), Query Frame = 1
BLAST of Cp4.1LG01g10270 vs. NCBI nr
Match: gi|255568159|ref|XP_002525055.1| (PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [Ricinus communis]) HSP 1 Score: 330.1 bits (845), Expect = 4.6e-87 Identity = 191/271 (70.48%), Postives = 218/271 (80.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |