Cp4.1LG01g10250 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g10250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG01 : 6849889 .. 6853201 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGAAAACCCAGCTTCCTTTTACTTTTGAAAGCAAGTGAAGAACAAAAACTATGAATTTGGATCAGCTAAGTGTTCGTCCTTTCAATTGTGTCACAGTTAAGCGTTTTTTTTATAGAACTCATCACTTATTTGTTGATTTGAATCAACCATCTTCAAGAACAACTCAATAGGGTTGATTATAAATTGAATTTGACATCAATGTCATGAAAGCCTCAGCATTAGGAAGTGGCTTAGTTCTCTTAGCTAACAGAGCCCTTAACTTCCATCCATTGTTTCAACGCTTCTTATCTTTTTCTTATGATTTCCCAGTTGGTAGAAACAACCCTCAAACCATTGCCGCTGCTCTTTCTCTGTCTGAAAATGTAAAATCATTCATTTTTGGTGCTCAAATACATGGTCATATCTGTAAGCTGGGGTTCACTTATGATACTTTTTCCATGAATAATCTGGTTAAGATGTACTGCAAATGCGGGTTTCTGTGTGAAGGACTCAAGGTGTTTGAAGAAATGCCACTGAGAAATGTAGTATCTTGGAGTTTGATCATTTCGGGTGCGGCTGAGAATGGAGAGTTTGAAGTTTGCTTGGAGACTTTTTTGGACATGATGAGGGTTGGGTTGGTGCCTAATGAGTTCACTCTTGGTAGTGTGATGAAGGCGTGTGCGGATATCGGAGCCTGTCGATTTGGTTCGAGTGTTCATTGTCTTTCTTGGAAACTTGGGATAGAGCAGAATGTCTTTGTTGGTGGTTCAACTTTGAGCATGTATGCAAGGCTTGGGGATATTACTTCAGCTAAGTTGGTTTTTGAATGGATGGATAAAGTAGATGTTGGTTGCTGGAATGCCATGATTGGAGGCTATACTAACTGTGGCCATGGCTTGGAAGCTCTGAGTGCTGTATCTTTGTTGGTTAGCAAGGGTATAAAGATGGACAAGTTCACCATTGTTAGTGCTATCAAAGCATGCTCAATAATTCAGGATTTGGATTCTGGAAAAGAACTTCATGGATTCATCCTTCGACATCGATTAACATCCACCGAGCCAATGAACGCTCTCATGGATATGTACTTCATAAATGGCAGGAAGAACTCTGCTTTGAAAACCTTTAACAGTATGCAAAGCAGAGACATTATATCATGGAATACAGTATTTGGAGGCTTCTCCGACGAAAACGATGCGAAAGAAATCGTGAACTTGTTTGGCAAGTTCATGCTAGAGGGCATGAAGCCTAACCATATCACTTTCTCGAGCTTATTTCGGGTATGTGGAGTACTACTTGATTGTAAACTTGGGTTTCAGTTCTTTTCTCTTGCAGTTCATTTGGGTTTTCTTTATGAATCTAGTGTTGTGAGCTCAATGCTTAGTATGTTTGCTCAATGTGGGTTAATGGAGATGGTACTCTCAGTATTTGACTCTCTAGTTTTCAAGCCTATATCTGCTTGGAATCAGCTAATCCTGGCATACAGTTTGAACTCTTTTGACATGGAAGCCTTGAGGACCTTTTCCAGTCTAGGTGTCGAAGCCAACGAATATACGTACTCCATCATTATAGAGACTGCCTGCAAATCTGAGAACCCATGGCTATGCAGACAGCTTCACTGTGCTTCATTGAAGGCTGGTTTTGGTTCTAACAGGTATGTTTCATGTTCATTGATGAAATGTTATATCATTATAGGATTCCTCGAAAGTTCATTTGAGATCTTTAATGAACTTGAGAGTGTAGATATGGCGACCTGGGGAGCTGTGATATCTGCCTTGGTGCACCAAAATCATACATATGAAGCCTTTATGTTTCTGAATGTTCTAATGGAATCTGATGAGAAGCCTGATGAGTTTATTCTCAGCAGCATACTGAATGGCTGTTCTAGCAGTGCAGCTTATCACCAAACGAAGGCTATCCATTCACTTGCAGAAAAGATGGGATTTGGGCTCCATGTGCATGTCGCTAGTGCCATTATAGATGCCTATGCAAAATGTGGCGACATAGGAAGTGCACAGCGAGCATTTGAGAAGTCAGGTGAGTCCAATGACATTATTGTTTATAACTCTATGATCATGGCTTATGCTCATCATGGTCTTGCTTGGCAAGCGATCCAAGTTTTTGAGAAAATAAGGAATGCTAATCTACAGCCTAGTCAAGCCACATTTGTCTCAGTTATTTCAGCCTGTGCTCACGTTGGTCTTATAGAACAAGGTCGTTCTCTGTTTCGAACTATGAAGTCGGAGTATAATATCACACCGTCTCGTGATAACTATGGTTGCTTAGTCGATATGCTGTCGAGGAATGGATTCCTTTACGACGCTCGATATGTAATTGAGTCGATGCCGTTTTCACCTTGGCCTGCCATATTGAGATCTTTGCTTAGTGGATGTAGGATCTATGGGAATAGAGAATTGGGGCGATGGACTGCTGAAAAGTTGCTTTCATTGGCTCCCCAGAATGATGCAGCCTTTGTGTTATTGTCAAAGGTGTATACTGAAGGGAATAGTTGGGAAGATGCTGCAAAGATAAGAAAGGGGATGACAGATAGAGAGGTTCTGAAAGACCCAGGCTATAGCAGGGTTGAGACATAAGAAAAAGGAAATGGAATCGTCTTTTCTACGTTTGAATCCCGAACTATATGTGAGATCCCACATCAGTTAGAGATAGAAACGAAACATTCTTTATAAGAGTGCGAAAACCTCTCTCTAGCAAACGCGTTTTAAAACTTTTAGAGGAAGCCCATATGGGAAAGCTCGAAGAGTTGCCATGGTGGGCTTGGGAGATTTTGAAACTTATTGTTCCAACGTGGAAAAAAACTCACTTAAAATTCTCATGTGAAACCTCGAGGTGCTTTTCACTTGCATTCGTGGCAAAAATCTCTTTCCGAGAGTTGCCGTGGTCTACACGTATCACCGAGGTTTTTCAGCGTACTAAATTCAGGTACATTACTTGCAAGTTGCAATACGGAATCTCTCTTCTCTTACGGTGTTTTTAAGCCCTTAGAAAGTCGTTTCAAACGAACCCTTAAATTAAGGTGATATTTCTGAAGTCGTTACATGGATTTTTTTATATAGGAAGAGCTCTGGTTGGGTGACAGAGGAAGCTACCCAAAGTATGGTGACAAACACTGTGAGGCTGTGAGCTGCAGCTTACCAAATGACTTCAGCTAACCAGCAAGCAAAGTTGGGTTTTTTGGTTGGTTTATGGGTTGGGCCTATTGGACCTAATCCAATGAGACTAAAATTGTTTCGGCCCGTTAGATTGGGCCTGATATGGGCCAAAACAAATCGGCCCGTGGGTCAACCCGAACTACTAAATGTTGATTTT

mRNA sequence

ATGGCCTCAGCATTAGGAAGTGGCTTAGTTCTCTTAGCTAACAGAGCCCTTAACTTCCATCCATTGTTTCAACGCTTCTTATCTTTTTCTTATGATTTCCCAGTTGGTAGAAACAACCCTCAAACCATTGCCGCTGCTCTTTCTCTGTCTGAAAATGATTTGGATTCTGGAAAAGAACTTCATGGATTCATCCTTCGACATCGATTAACATCCACCGAGCCAATGAACGCTCTCATGGATATGTACTTCATAAATGGCAGGAAGAACTCTGCTTTGAAAACCTTTAACAGTATGCAAAGCAGAGACATTATATCATGGAATACAGTATTTGGAGGCTTCTCCGACGAAAACGATGCGAAAGAAATCGTGAACTTGTTTGGCAAGTTCATGCTAGAGGGCATGAAGCCTAACCATATCACTTTCTCGAGCTTATTTCGGGTATGTGGAGTACTACTTGATTGTAAACTTGGGTTTCAGTTCTTTTCTCTTGCAGTTCATTTGGGTTTTCTTTATGAATCTAGTGTTGTGAGCTCAATGCTTAGTATGTTTGCTCAATGTGGGTTAATGGAGATGGTACTCTCAGTATTTGACTCTCTAGTTTTCAAGCCTATATCTGCTTGGAATCAGCTAATCCTGGCATACAGTTTGAACTCTTTTGACATGGAAGCCTTGAGGACCTTTTCCAGTCTAGGTGTCGAAGCCAACGAATATACGTATGTTTCATGTTCATTGATGAAATGTTATATCATTATAGGATTCCTCGAAAGTTCATTTGAGATCTTTAATGAACTTGAGAGTGTAGATATGGCGACCTGGGGAGCTGTGATATCTGCCTTGGTGCACCAAAATCATACATATGAAGCCTTTATGTTTCTGAATGTTCTAATGGAATCTGATGAGAAGCCTGATGAGTTTATTCTCAGCAGCATACTGAATGGCTGTTCTAGCAGTGCAGCTTATCACCAAACGAAGGCTATCCATTCACTTGCAGAAAAGATGGGATTTGGGCTCCATGTGCATGTCGCTAGTGCCATTATAGATGCCTATGCAAAATGTGGCGACATAGGAAGTGCACAGCGAGCATTTGAGAAGTCAGGTGAGTCCAATGACATTATTGTTTATAACTCTATGATCATGGCTTATGCTCATCATGGTCTTGCTTGGCAAGCGATCCAAGTTTTTGAGAAAATAAGGAATGCTAATCTACAGCCTAGTCAAGCCACATTTGTCTCAGTTATTTCAGCCTGTGCTCACGTTGGTCTTATAGAACAAGGTCGTTCTCTGTTTCGAACTATGAAGTCGGAGTATAATATCACACCGTCTCGTGATAACTATGGTTGCTTAGTCGATATGCTGTCGAGGAATGGATTCCTTTACGACGCTCGATATGTAATTGAGTCGATGCCGTTTTCACCTTGGCCTGCCATATTGAGATCTTTGCTTAGTGGATGTAGGATCTATGGGAATAGAGAATTGGGGCGATGGACTGCTGAAAAGTTGCTTTCATTGGCTCCCCAGAATGATGCAGCCTTTGTGTTATTGTCAAAGGTGTATACTGAAGGGAATAGTTGGGAAGATGCTGCAAAGATAAGAAAGGGGATGACAGATAGAGAGGTTCTGAAAGACCCAGGCTATAGCAGGGAAGAGCTCTGGTTGGGTGACAGAGGAAGCTACCCAAAGTATGGTGACAAACACTGTGAGGCTGTGAGCTGCAGCTTACCAAATGACTTCAGCTAACCAGCAAGCAAAGTTGGGTTTTTTGGTTGGTTTATGGGTTGGGCCTATTGGACCTAATCCAATGAGACTAAAATTGTTTCGGCCCGTTAGATTGGGCCTGATATGGGCCAAAACAAATCGGCCCGTGGGTCAACCCGAACTACTAAATGTTGATTTT

Coding sequence (CDS)

ATGGCCTCAGCATTAGGAAGTGGCTTAGTTCTCTTAGCTAACAGAGCCCTTAACTTCCATCCATTGTTTCAACGCTTCTTATCTTTTTCTTATGATTTCCCAGTTGGTAGAAACAACCCTCAAACCATTGCCGCTGCTCTTTCTCTGTCTGAAAATGATTTGGATTCTGGAAAAGAACTTCATGGATTCATCCTTCGACATCGATTAACATCCACCGAGCCAATGAACGCTCTCATGGATATGTACTTCATAAATGGCAGGAAGAACTCTGCTTTGAAAACCTTTAACAGTATGCAAAGCAGAGACATTATATCATGGAATACAGTATTTGGAGGCTTCTCCGACGAAAACGATGCGAAAGAAATCGTGAACTTGTTTGGCAAGTTCATGCTAGAGGGCATGAAGCCTAACCATATCACTTTCTCGAGCTTATTTCGGGTATGTGGAGTACTACTTGATTGTAAACTTGGGTTTCAGTTCTTTTCTCTTGCAGTTCATTTGGGTTTTCTTTATGAATCTAGTGTTGTGAGCTCAATGCTTAGTATGTTTGCTCAATGTGGGTTAATGGAGATGGTACTCTCAGTATTTGACTCTCTAGTTTTCAAGCCTATATCTGCTTGGAATCAGCTAATCCTGGCATACAGTTTGAACTCTTTTGACATGGAAGCCTTGAGGACCTTTTCCAGTCTAGGTGTCGAAGCCAACGAATATACGTATGTTTCATGTTCATTGATGAAATGTTATATCATTATAGGATTCCTCGAAAGTTCATTTGAGATCTTTAATGAACTTGAGAGTGTAGATATGGCGACCTGGGGAGCTGTGATATCTGCCTTGGTGCACCAAAATCATACATATGAAGCCTTTATGTTTCTGAATGTTCTAATGGAATCTGATGAGAAGCCTGATGAGTTTATTCTCAGCAGCATACTGAATGGCTGTTCTAGCAGTGCAGCTTATCACCAAACGAAGGCTATCCATTCACTTGCAGAAAAGATGGGATTTGGGCTCCATGTGCATGTCGCTAGTGCCATTATAGATGCCTATGCAAAATGTGGCGACATAGGAAGTGCACAGCGAGCATTTGAGAAGTCAGGTGAGTCCAATGACATTATTGTTTATAACTCTATGATCATGGCTTATGCTCATCATGGTCTTGCTTGGCAAGCGATCCAAGTTTTTGAGAAAATAAGGAATGCTAATCTACAGCCTAGTCAAGCCACATTTGTCTCAGTTATTTCAGCCTGTGCTCACGTTGGTCTTATAGAACAAGGTCGTTCTCTGTTTCGAACTATGAAGTCGGAGTATAATATCACACCGTCTCGTGATAACTATGGTTGCTTAGTCGATATGCTGTCGAGGAATGGATTCCTTTACGACGCTCGATATGTAATTGAGTCGATGCCGTTTTCACCTTGGCCTGCCATATTGAGATCTTTGCTTAGTGGATGTAGGATCTATGGGAATAGAGAATTGGGGCGATGGACTGCTGAAAAGTTGCTTTCATTGGCTCCCCAGAATGATGCAGCCTTTGTGTTATTGTCAAAGGTGTATACTGAAGGGAATAGTTGGGAAGATGCTGCAAAGATAAGAAAGGGGATGACAGATAGAGAGGTTCTGAAAGACCCAGGCTATAGCAGGGAAGAGCTCTGGTTGGGTGACAGAGGAAGCTACCCAAAGTATGGTGACAAACACTGTGAGGCTGTGAGCTGCAGCTTACCAAATGACTTCAGCTAA

Protein sequence

MASALGSGLVLLANRALNFHPLFQRFLSFSYDFPVGRNNPQTIAAALSLSENDLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSLGVEANEYTYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREELWLGDRGSYPKYGDKHCEAVSCSLPNDFS
BLAST of Cp4.1LG01g10250 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-75
Identity = 165/545 (30.28%), Postives = 290/545 (53.21%), Query Frame = 1

Query: 39  NPQTIAAALS-LSENDLDS-GKELHGFILRHRLTSTEPM-NALMDMYFINGRKNSALKTF 98
           N  T AAAL  L+E  +   G ++H  ++++ L  T P+ N+L+++Y   G    A   F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252

Query: 99  NSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 158
           +  + + +++WN++  G++      E + +F    L  ++ +  +F+S+ ++C  L + +
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312

Query: 159 LGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSL-VFKPISAWNQLILAY 218
              Q     V  GFL++ ++ ++++  +++C  M   L +F  +     + +W  +I  +
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372

Query: 219 SLNSFDMEALRTFSSL---GVEANEYTY-----------------------------VSC 278
             N    EA+  FS +   GV  NE+TY                             V  
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT 432

Query: 279 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 338
           +L+  Y+ +G +E + ++F+ ++  D+  W A+++       T  A      L +   KP
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492

Query: 339 DEFILSSILNGCSSS-AAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRA 398
           +EF  SSILN C+++ A+  Q K  H  A K      + V+SA++  YAK G+I SA+  
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552

Query: 399 FEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGL 458
           F++  E  D++ +NSMI  YA HG A +A+ VF++++   ++    TF+ V +AC H GL
Sbjct: 553 FKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 612

Query: 459 IEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLL 518
           +E+G   F  M  +  I P++++  C+VD+ SR G L  A  VIE+MP      I R++L
Sbjct: 613 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 672

Query: 519 SGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLK 547
           + CR++   ELGR  AEK++++ P++ AA+VLLS +Y E   W++ AK+RK M +R V K
Sbjct: 673 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 732

BLAST of Cp4.1LG01g10250 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-70
Identity = 160/530 (30.19%), Postives = 268/530 (50.57%), Query Frame = 1

Query: 23  FQRFLSFSYDFPVGRNNPQTIAAALSLSENDLDSGKELHGFILRHRLTSTEPM-NALMDM 82
           F   +S S  +P     P  I AA  +S   L  G+ LHG  ++  + S   + N+L+  
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSS--LSLGQSLHGMAVKSAVGSDVFVANSLIHC 177

Query: 83  YFINGRKNSALKTFNSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITF 142
           YF  G  +SA K F +++ +D++SWN++  GF  +    + + LF K   E +K +H+T 
Sbjct: 178 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 237

Query: 143 SSLFRVCGVLLDCKLGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVF 202
             +   C  + + + G Q  S           ++ ++ML M+ +CG +E    +FD++  
Sbjct: 238 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME- 297

Query: 203 KPISAWNQLILAYSLNSFDMEALRTFSSLGVEANEYTYVSCSLMKCYIIIGFLESSFEIF 262
                                          E +  T+ +  ++  Y I    E++ E+ 
Sbjct: 298 -------------------------------EKDNVTWTT--MLDGYAISEDYEAAREVL 357

Query: 263 NELESVDMATWGAVISALVHQNHTYEAFMFLNVL-MESDEKPDEFILSSILNGCSSSAAY 322
           N +   D+  W A+ISA        EA +  + L ++ + K ++  L S L+ C+   A 
Sbjct: 358 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 417

Query: 323 HQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMA 382
              + IHS  +K G  ++ HV SA+I  Y+KCGD+  ++  F  S E  D+ V+++MI  
Sbjct: 418 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN-SVEKRDVFVWSAMIGG 477

Query: 383 YAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEYNITP 442
            A HG   +A+ +F K++ AN++P+  TF +V  AC+H GL+++  SLF  M+S Y I P
Sbjct: 478 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 537

Query: 443 SRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWTAEKL 502
              +Y C+VD+L R+G+L  A   IE+MP  P  ++  +LL  C+I+ N  L      +L
Sbjct: 538 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 597

Query: 503 LSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
           L L P+ND A VLLS +Y +   WE+ +++RK M    + K+PG S  E+
Sbjct: 598 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610

BLAST of Cp4.1LG01g10250 vs. Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.1e-68
Identity = 152/511 (29.75%), Postives = 255/511 (49.90%), Query Frame = 1

Query: 54  LDSGKELHGFILRHRLTSTEPM--NALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFG 113
           L  G ELHG   +   T  +P      MDMY   GR N A   F+ M  RD+++WNT+  
Sbjct: 127 LFEGMELHGVAFKIA-TLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 186

Query: 114 GFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLY 173
            +       E   LF +     + P+ +   ++   CG   + +     +   +      
Sbjct: 187 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 246

Query: 174 ESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSLG 233
           ++ +++++++M+A  G M+M         F+ +S  N                       
Sbjct: 247 DTHLLTALVTMYAGAGCMDMARE-----FFRKMSVRN----------------------- 306

Query: 234 VEANEYTYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMF 293
                  +VS +++  Y   G L+ +  IF++ E  D+  W  +ISA V  ++  EA   
Sbjct: 307 ------LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 366

Query: 294 LNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAK 353
              +  S  KPD   + S+++ C++     + K +HS     G    + + +A+I+ YAK
Sbjct: 367 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 426

Query: 354 CGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVS 413
           CG + + +  FEK    N ++ ++SMI A + HG A  A+ +F +++  N++P++ TFV 
Sbjct: 427 CGGLDATRDVFEKMPRRN-VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 486

Query: 414 VISACAHVGLIEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFS 473
           V+  C+H GL+E+G+ +F +M  EYNITP  ++YGC+VD+  R   L +A  VIESMP +
Sbjct: 487 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 546

Query: 474 PWPAILRSLLSGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIR 533
               I  SL+S CRI+G  ELG++ A+++L L P +D A VL+S +Y     WED   IR
Sbjct: 547 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 601

Query: 534 KGMTDREVLKDPGYSR-------EELWLGDR 556
           + M ++ V K+ G SR        E  +GD+
Sbjct: 607 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601

BLAST of Cp4.1LG01g10250 vs. Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-67
Identity = 149/540 (27.59%), Postives = 269/540 (49.81%), Query Frame = 1

Query: 50  SENDLDSGKELHGFILRHRLTS-TEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNT 109
           S +D+  GK+LH  +++   +S     NAL+ MY    + + A + F  +  +D+ISW++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 110 VFGGFSDENDAKEIVNLFGKFMLEGM-KPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHL 169
           +  GFS      E ++   + +  G+  PN   F S  + C  LL    G Q   L +  
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299

Query: 170 GFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTF 229
                +    S+  M+A+CG +     VFD +     ++WN +I   + N +  EA+  F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359

Query: 230 SSL---------------------------GVEANEYTY---------VSCSLMKCYIII 289
           S +                           G++ + Y           V  SL+  Y   
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC 419

Query: 290 GFLESSFEIFNELES-VDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSI 349
             L   F +F +  +  D  +W  +++A +      E      +++ S+ +PD   + ++
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479

Query: 350 LNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESND 409
           L GC   ++      +H  + K G      + + +ID YAKCG +G A+R F+ S ++ D
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD-SMDNRD 539

Query: 410 IIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFR 469
           ++ ++++I+ YA  G   +A+ +F+++++A ++P+  TFV V++AC+HVGL+E+G  L+ 
Sbjct: 540 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 599

Query: 470 TMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNR 529
           TM++E+ I+P++++  C+VD+L+R G L +A   I+ M   P   + ++LLS C+  GN 
Sbjct: 600 TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV 659

Query: 530 ELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
            L +  AE +L + P N  A VLL  ++    +WE+AA +R  M   +V K PG S  E+
Sbjct: 660 HLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEI 718

BLAST of Cp4.1LG01g10250 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-66
Identity = 146/534 (27.34%), Postives = 262/534 (49.06%), Query Frame = 1

Query: 50  SENDLDSGKELHGFILRHRLTSTEPMN-ALMDMYFINGRKNSALKTFNSMQSRDIISWNT 109
           ++  L  G++LH +  +    S   +  AL+++Y       +AL  F   +  +++ WN 
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460

Query: 110 VFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLG 169
           +   +   +D +    +F +  +E + PN  T+ S+ + C  L D +LG Q  S  +   
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520

Query: 170 FLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFS 229
           F   + V S ++ M+A+ G ++    +      K + +W  +I  Y+  +FD +AL TF 
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580

Query: 230 SL---GVEANEYTYVSC---------------------------------SLMKCYIIIG 289
            +   G+ ++E    +                                  +L+  Y   G
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640

Query: 290 FLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILN 349
            +E S+  F + E+ D   W A++S      +  EA      +       + F   S + 
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700

Query: 350 GCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDII 409
             S +A   Q K +H++  K G+     V +A+I  YAKCG I  A++ F +    N++ 
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760

Query: 410 VYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTM 469
            +N++I AY+ HG   +A+  F+++ ++N++P+  T V V+SAC+H+GL+++G + F +M
Sbjct: 761 -WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 820

Query: 470 KSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNREL 529
            SEY ++P  ++Y C+VDML+R G L  A+  I+ MP  P   + R+LLS C ++ N E+
Sbjct: 821 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 880

Query: 530 GRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYS 547
           G + A  LL L P++ A +VLLS +Y     W+     R+ M ++ V K+PG S
Sbjct: 881 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933

BLAST of Cp4.1LG01g10250 vs. TrEMBL
Match: A0A0A0KV18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577950 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 2.3e-226
Identity = 410/534 (76.78%), Postives = 447/534 (83.71%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGG 112
           DLDSGKELHGFILR  L ST  MNALMDMY I+ RKNS LK FNSMQ+RDIISWNTVFGG
Sbjct: 257 DLDSGKELHGFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGG 316

Query: 113 FSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYE 172
            S+E   KEIV+LFGKF++EGMKPNHITFS LFR CGVLLD +LGFQFFSLAVHLG L E
Sbjct: 317 SSNE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGCLDE 376

Query: 173 SSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSL-- 232
           + V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQ ILAYSLNSF+MEA RTFSSL  
Sbjct: 377 TRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLR 436

Query: 233 -GVEANEYT---------------------------------YVSCSLMKCYIIIGFLES 292
            GV ANEYT                                 YVSCSL+KCYI+IG LES
Sbjct: 437 YGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLES 496

Query: 293 SFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSS 352
           SFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES +KPDEF   SILNGCSS
Sbjct: 497 SFEIFNQLEIVDMATYGAVISTLVHQNHMYEAIMFLNILMESGKKPDEFTFGSILNGCSS 556

Query: 353 SAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNS 412
            AAYHQTKAIHSL EKMGFG HVHVASAIIDAYAKCGDIGSAQ AFE+S +SND+IVYNS
Sbjct: 557 RAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNS 616

Query: 413 MIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEY 472
           M+MAYAHHGLA +AIQ FEK+R A +QPSQA+FVSVISAC H+GL+EQGRSLF+TMKS+Y
Sbjct: 617 MMMAYAHHGLACEAIQTFEKMRIAKVQPSQASFVSVISACRHMGLVEQGRSLFQTMKSDY 676

Query: 473 NITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWT 532
           N+TPSRDNYGCLVDMLSRNGFLYDARY+IESMPFSPWPAILRSLLSGCRIYGN ELG+WT
Sbjct: 677 NMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNVELGQWT 736

Query: 533 AEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
           AEKLLSLAPQN A  VLLSKVY+EGNSWEDAA IRK MTDR VLKDPGYSR E+
Sbjct: 737 AEKLLSLAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDPGYSRVEI 787

BLAST of Cp4.1LG01g10250 vs. TrEMBL
Match: A0A0A0KRW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174670 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 1.7e-218
Identity = 392/503 (77.93%), Postives = 432/503 (85.88%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGG 112
           DLDSGKELHGFILR  L ST  MNALMDMY I+ RKNS LK FNSMQ+RDIISWNTVFGG
Sbjct: 180 DLDSGKELHGFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGG 239

Query: 113 FSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYE 172
            S+E   KEIV+LFGKF++EGMKPNHITFS LFR CGVLLD +LGFQFFSLAVHLG L E
Sbjct: 240 SSNE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGCLDE 299

Query: 173 SSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSL-----NSFDMEALRTF 232
           + V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQ ILAY       N +    L   
Sbjct: 300 TRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYKTACKFENPWMCRQLHC- 359

Query: 233 SSLGVEANEYTYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYE 292
           +S+      + YVSCSL+KCYI+IG LESSFEIFN+LE VDMAT+GAVIS LVHQN+ YE
Sbjct: 360 ASMKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYE 419

Query: 293 AFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIID 352
           A MFLN LMES +KPDEF   SILNGCSS AAYHQTKAIHSL EKMGFG HVHVASAIID
Sbjct: 420 AIMFLNFLMESGKKPDEFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGFHVHVASAIID 479

Query: 353 AYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQA 412
           AYAKCGDIGSAQ AFE+S +SND+IVYNSM+MAYAHHGLA +AIQ FEK+R A +QPSQA
Sbjct: 480 AYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLACEAIQTFEKMRIAKVQPSQA 539

Query: 413 TFVSVISACAHVGLIEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIES 472
           +FVSVISAC H+GL+EQGRSLF+TMKS+YN+TPSRDNYGCLVDMLSRNGFLYDARY+IES
Sbjct: 540 SFVSVISACRHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIES 599

Query: 473 MPFSPWPAILRSLLSGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDA 532
           MPFSPWPAILRSLLSGCRIYGN ELG+WTAEKLLSLAPQNDA  VLLSKVY+EGNSWEDA
Sbjct: 600 MPFSPWPAILRSLLSGCRIYGNVELGQWTAEKLLSLAPQNDATHVLLSKVYSEGNSWEDA 659

Query: 533 AKIRKGMTDREVLKDPGYSREEL 551
           A IRK MTDR VLKDPGYSR E+
Sbjct: 660 ANIRKEMTDRGVLKDPGYSRVEI 678

BLAST of Cp4.1LG01g10250 vs. TrEMBL
Match: F6HIN1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00130 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.5e-150
Identity = 279/535 (52.15%), Postives = 362/535 (67.66%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLT-STEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFG 112
           +L+ G+++HG I++  +  ST  MN+LMDMYF NG    ALK F+ +Q +DIISWNTVF 
Sbjct: 276 NLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFA 335

Query: 113 GFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLY 172
           G S  +DA+EI   F K ML G+KPN +TFS LFR CG  LD   G QF  LA   G   
Sbjct: 336 GLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISD 395

Query: 173 ESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLN-------------- 232
           E+SV SS+++MF++CG M M   VFDS  FK I   N++I  Y+LN              
Sbjct: 396 EASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLN 455

Query: 233 SFDMEALRTFSSLGVEANEYT----------------------YVSCSLMKCYIIIGFLE 292
              +EA     S  +EA   T                      YV  SL+KCY+  G L+
Sbjct: 456 GLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLD 515

Query: 293 SSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCS 352
            SFE FN +E +D+ +WGA+ISALVH+ ++ EA   LN L E+  KPDEFI  SI N C+
Sbjct: 516 DSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCA 575

Query: 353 SSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYN 412
             AAY QTK++HSL  KMG+  HV VASA+IDAYAKCGDI +A+R F+++    D+I++N
Sbjct: 576 GIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFN 635

Query: 413 SMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSE 472
           +M+MAYAHHGL  +A++ FEK++ A L+PSQATFVSVISAC+H+GL+EQG   F++M  +
Sbjct: 636 TMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLD 695

Query: 473 YNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRW 532
           Y + PS DNYGCLVD+ SRNGFL DA+++IE+MPF PWPAI RSLL+GCRI+GN+ELG W
Sbjct: 696 YGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEW 755

Query: 533 TAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
            A+KLL L P+NDAA+VLLSKVY+E  SW DAAK+RKGM +R + KDPG S  E+
Sbjct: 756 AAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 810

BLAST of Cp4.1LG01g10250 vs. TrEMBL
Match: V4TM25_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030859mg PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.1e-145
Identity = 270/536 (50.37%), Postives = 362/536 (67.54%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLT-STEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFG 112
           D D G+++HG I+R  +  S   +NAL+DMY  +   + A K F  M  +D+ISWNT+FG
Sbjct: 157 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 216

Query: 113 GFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLY 172
           GFS+  +  +  +LF KF+L G +PNH+TFS L R CG LLD  LG Q   LA+H GFL 
Sbjct: 217 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 276

Query: 173 ESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSL- 232
             +V SS++ MF +CG +EM  SVFD++ +K I+ WN+L+  Y  N  D + L+TF ++ 
Sbjct: 277 GENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 336

Query: 233 --GVEANEYTY--------------VSCSLMKCYIIIGF---------LESSFEIFNELE 292
             GVE N  T+              +   +    I  GF         L  S+  F +L+
Sbjct: 337 ESGVEVNGCTFFYVVETCCRSENQQMVVQIHGAIIKTGFSSCGYICSTLIKSYVNFGQLD 396

Query: 293 S----------VDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCS 352
           +          +DMA+WGA++SALVHQ H +EA      L+E+ EKPDE+IL +ILN C+
Sbjct: 397 NSFEFFNGAERLDMASWGAMMSALVHQGHNHEAVTIFYSLVEAGEKPDEYILGTILNSCA 456

Query: 353 SSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYN 412
           +  AY +TK+IH    K+GF   V+VASA+IDAYAKCGDI  A  AF++S  SND+IVYN
Sbjct: 457 AIGAYQRTKSIHPFVIKLGFDTEVYVASAVIDAYAKCGDIKGAGMAFDQSFNSNDVIVYN 516

Query: 413 SMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSE 472
           + IMAYAHHGL  +A+++F+K++ ANLQPSQATFVSV+SAC+H GL+++G  LF++M S+
Sbjct: 517 TFIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 576

Query: 473 YNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRW 532
           Y + PS D YGCLVDMLSRNG+L DA++VIE MPF P P + RSLLSGCRI+GN+ELG W
Sbjct: 577 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 636

Query: 533 TAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREELW 552
            +EKLL L P+NDAA VLLSKVY+E   WE AA +R+GMT+++VLKDPGYS  E W
Sbjct: 637 ASEKLLLLLPKNDAAHVLLSKVYSEDGCWESAAIVRRGMTEKQVLKDPGYSWIETW 692

BLAST of Cp4.1LG01g10250 vs. TrEMBL
Match: B9HPK8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s03250g PE=4 SV=2)

HSP 1 Score: 503.4 bits (1295), Expect = 3.6e-139
Identity = 265/531 (49.91%), Postives = 350/531 (65.91%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEP-MNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFG 112
           DL+ G+++HG I+R  L  + P MNALMDMYF NG   S L  F  M  RD+++WNTVFG
Sbjct: 225 DLNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFG 284

Query: 113 GFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLY 172
            FS   D K+I +LF  F+L  M+PNHITFS LFR CG LL+  LG QF  LA+H G   
Sbjct: 285 SFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFD 344

Query: 173 ESSVVSSMLSMFAQCGLMEM-----------------------VLSVFDSLVFKPISAWN 232
           E+++ S++++MF++CG MEM                        L+  D+   K      
Sbjct: 345 EANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLL 404

Query: 233 QL-----------ILAYSLNSFDMEALRTFSSLGVEAN--EYTYVSCSLMKCYIIIGFLE 292
           QL           +L     S +    R    +  ++    + YV  SL+K YI  G L+
Sbjct: 405 QLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLD 464

Query: 293 SSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCS 352
            S ++FN L+  DMA WG +ISA VHQ    EA   LN+L+E+ EKPDEFIL SIL+ C+
Sbjct: 465 DSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSCA 524

Query: 353 SSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYN 412
           S+ AY QTK++HSL  K+GF  HV VASA++DAYAKCGDI SA+ AF +S +S+D+++YN
Sbjct: 525 STVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYN 584

Query: 413 SMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSE 472
           +MI+AYAHHG   +A+  ++K++ ANLQPSQATFVSVI+AC H+G +E+G  LF++M   
Sbjct: 585 AMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGHVEKGCRLFKSM-DL 644

Query: 473 YNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRW 532
           Y + PS D YGCLVDM SRNG+L DA+ +IES+P+  WPAILRSLLSGCR+YGNRELG W
Sbjct: 645 YGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSLLSGCRMYGNRELGEW 704

Query: 533 TAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYS 547
            A+KLL L P NDAA  LL KVY+E  +WEDAAK+R+ M +R + KDPG+S
Sbjct: 705 AAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAERGLRKDPGHS 754

BLAST of Cp4.1LG01g10250 vs. TAIR10
Match: AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-76
Identity = 165/545 (30.28%), Postives = 290/545 (53.21%), Query Frame = 1

Query: 39  NPQTIAAALS-LSENDLDS-GKELHGFILRHRLTSTEPM-NALMDMYFINGRKNSALKTF 98
           N  T AAAL  L+E  +   G ++H  ++++ L  T P+ N+L+++Y   G    A   F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252

Query: 99  NSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCK 158
           +  + + +++WN++  G++      E + +F    L  ++ +  +F+S+ ++C  L + +
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312

Query: 159 LGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSL-VFKPISAWNQLILAY 218
              Q     V  GFL++ ++ ++++  +++C  M   L +F  +     + +W  +I  +
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372

Query: 219 SLNSFDMEALRTFSSL---GVEANEYTY-----------------------------VSC 278
             N    EA+  FS +   GV  NE+TY                             V  
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT 432

Query: 279 SLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKP 338
           +L+  Y+ +G +E + ++F+ ++  D+  W A+++       T  A      L +   KP
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492

Query: 339 DEFILSSILNGCSSS-AAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRA 398
           +EF  SSILN C+++ A+  Q K  H  A K      + V+SA++  YAK G+I SA+  
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552

Query: 399 FEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGL 458
           F++  E  D++ +NSMI  YA HG A +A+ VF++++   ++    TF+ V +AC H GL
Sbjct: 553 FKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 612

Query: 459 IEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLL 518
           +E+G   F  M  +  I P++++  C+VD+ SR G L  A  VIE+MP      I R++L
Sbjct: 613 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 672

Query: 519 SGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLK 547
           + CR++   ELGR  AEK++++ P++ AA+VLLS +Y E   W++ AK+RK M +R V K
Sbjct: 673 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 732

BLAST of Cp4.1LG01g10250 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-71
Identity = 160/530 (30.19%), Postives = 268/530 (50.57%), Query Frame = 1

Query: 23  FQRFLSFSYDFPVGRNNPQTIAAALSLSENDLDSGKELHGFILRHRLTSTEPM-NALMDM 82
           F   +S S  +P     P  I AA  +S   L  G+ LHG  ++  + S   + N+L+  
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSS--LSLGQSLHGMAVKSAVGSDVFVANSLIHC 177

Query: 83  YFINGRKNSALKTFNSMQSRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITF 142
           YF  G  +SA K F +++ +D++SWN++  GF  +    + + LF K   E +K +H+T 
Sbjct: 178 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 237

Query: 143 SSLFRVCGVLLDCKLGFQFFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVF 202
             +   C  + + + G Q  S           ++ ++ML M+ +CG +E    +FD++  
Sbjct: 238 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME- 297

Query: 203 KPISAWNQLILAYSLNSFDMEALRTFSSLGVEANEYTYVSCSLMKCYIIIGFLESSFEIF 262
                                          E +  T+ +  ++  Y I    E++ E+ 
Sbjct: 298 -------------------------------EKDNVTWTT--MLDGYAISEDYEAAREVL 357

Query: 263 NELESVDMATWGAVISALVHQNHTYEAFMFLNVL-MESDEKPDEFILSSILNGCSSSAAY 322
           N +   D+  W A+ISA        EA +  + L ++ + K ++  L S L+ C+   A 
Sbjct: 358 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 417

Query: 323 HQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMA 382
              + IHS  +K G  ++ HV SA+I  Y+KCGD+  ++  F  S E  D+ V+++MI  
Sbjct: 418 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN-SVEKRDVFVWSAMIGG 477

Query: 383 YAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEYNITP 442
            A HG   +A+ +F K++ AN++P+  TF +V  AC+H GL+++  SLF  M+S Y I P
Sbjct: 478 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 537

Query: 443 SRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWTAEKL 502
              +Y C+VD+L R+G+L  A   IE+MP  P  ++  +LL  C+I+ N  L      +L
Sbjct: 538 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 597

Query: 503 LSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
           L L P+ND A VLLS +Y +   WE+ +++RK M    + K+PG S  E+
Sbjct: 598 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610

BLAST of Cp4.1LG01g10250 vs. TAIR10
Match: AT4G14820.1 (AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 259.6 bits (662), Expect = 4.5e-69
Identity = 152/511 (29.75%), Postives = 255/511 (49.90%), Query Frame = 1

Query: 54  LDSGKELHGFILRHRLTSTEPM--NALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFG 113
           L  G ELHG   +   T  +P      MDMY   GR N A   F+ M  RD+++WNT+  
Sbjct: 127 LFEGMELHGVAFKIA-TLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 186

Query: 114 GFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLY 173
            +       E   LF +     + P+ +   ++   CG   + +     +   +      
Sbjct: 187 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 246

Query: 174 ESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSLG 233
           ++ +++++++M+A  G M+M         F+ +S  N                       
Sbjct: 247 DTHLLTALVTMYAGAGCMDMARE-----FFRKMSVRN----------------------- 306

Query: 234 VEANEYTYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMF 293
                  +VS +++  Y   G L+ +  IF++ E  D+  W  +ISA V  ++  EA   
Sbjct: 307 ------LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 366

Query: 294 LNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAK 353
              +  S  KPD   + S+++ C++     + K +HS     G    + + +A+I+ YAK
Sbjct: 367 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 426

Query: 354 CGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVS 413
           CG + + +  FEK    N ++ ++SMI A + HG A  A+ +F +++  N++P++ TFV 
Sbjct: 427 CGGLDATRDVFEKMPRRN-VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 486

Query: 414 VISACAHVGLIEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFS 473
           V+  C+H GL+E+G+ +F +M  EYNITP  ++YGC+VD+  R   L +A  VIESMP +
Sbjct: 487 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 546

Query: 474 PWPAILRSLLSGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIR 533
               I  SL+S CRI+G  ELG++ A+++L L P +D A VL+S +Y     WED   IR
Sbjct: 547 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 601

Query: 534 KGMTDREVLKDPGYSR-------EELWLGDR 556
           + M ++ V K+ G SR        E  +GD+
Sbjct: 607 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601

BLAST of Cp4.1LG01g10250 vs. TAIR10
Match: AT3G53360.1 (AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 258.8 bits (660), Expect = 7.7e-69
Identity = 149/540 (27.59%), Postives = 269/540 (49.81%), Query Frame = 1

Query: 50  SENDLDSGKELHGFILRHRLTS-TEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNT 109
           S +D+  GK+LH  +++   +S     NAL+ MY    + + A + F  +  +D+ISW++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 110 VFGGFSDENDAKEIVNLFGKFMLEGM-KPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHL 169
           +  GFS      E ++   + +  G+  PN   F S  + C  LL    G Q   L +  
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299

Query: 170 GFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTF 229
                +    S+  M+A+CG +     VFD +     ++WN +I   + N +  EA+  F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359

Query: 230 SSL---------------------------GVEANEYTY---------VSCSLMKCYIII 289
           S +                           G++ + Y           V  SL+  Y   
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC 419

Query: 290 GFLESSFEIFNELES-VDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSI 349
             L   F +F +  +  D  +W  +++A +      E      +++ S+ +PD   + ++
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479

Query: 350 LNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESND 409
           L GC   ++      +H  + K G      + + +ID YAKCG +G A+R F+ S ++ D
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD-SMDNRD 539

Query: 410 IIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFR 469
           ++ ++++I+ YA  G   +A+ +F+++++A ++P+  TFV V++AC+HVGL+E+G  L+ 
Sbjct: 540 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 599

Query: 470 TMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNR 529
           TM++E+ I+P++++  C+VD+L+R G L +A   I+ M   P   + ++LLS C+  GN 
Sbjct: 600 TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV 659

Query: 530 ELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
            L +  AE +L + P N  A VLL  ++    +WE+AA +R  M   +V K PG S  E+
Sbjct: 660 HLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEI 718

BLAST of Cp4.1LG01g10250 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 255.8 bits (652), Expect = 6.6e-68
Identity = 146/534 (27.34%), Postives = 262/534 (49.06%), Query Frame = 1

Query: 50  SENDLDSGKELHGFILRHRLTSTEPMN-ALMDMYFINGRKNSALKTFNSMQSRDIISWNT 109
           ++  L  G++LH +  +    S   +  AL+++Y       +AL  F   +  +++ WN 
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460

Query: 110 VFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLG 169
           +   +   +D +    +F +  +E + PN  T+ S+ + C  L D +LG Q  S  +   
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520

Query: 170 FLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFS 229
           F   + V S ++ M+A+ G ++    +      K + +W  +I  Y+  +FD +AL TF 
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580

Query: 230 SL---GVEANEYTYVSC---------------------------------SLMKCYIIIG 289
            +   G+ ++E    +                                  +L+  Y   G
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640

Query: 290 FLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILN 349
            +E S+  F + E+ D   W A++S      +  EA      +       + F   S + 
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700

Query: 350 GCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDII 409
             S +A   Q K +H++  K G+     V +A+I  YAKCG I  A++ F +    N++ 
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760

Query: 410 VYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTM 469
            +N++I AY+ HG   +A+  F+++ ++N++P+  T V V+SAC+H+GL+++G + F +M
Sbjct: 761 -WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 820

Query: 470 KSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNREL 529
            SEY ++P  ++Y C+VDML+R G L  A+  I+ MP  P   + R+LLS C ++ N E+
Sbjct: 821 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 880

Query: 530 GRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYS 547
           G + A  LL L P++ A +VLLS +Y     W+     R+ M ++ V K+PG S
Sbjct: 881 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933

BLAST of Cp4.1LG01g10250 vs. NCBI nr
Match: gi|659090199|ref|XP_008445887.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X1 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 3.0e-232
Identity = 418/546 (76.56%), Postives = 460/546 (84.25%), Query Frame = 1

Query: 42  TIAAALSLSE--NDLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQ 101
           TI +A+       DLDSGKELHGFILR  L ST  MNALMDMYFI+ RKNSALKTFNSMQ
Sbjct: 244 TIVSAIKACSLIQDLDSGKELHGFILRRGLISTAVMNALMDMYFISDRKNSALKTFNSMQ 303

Query: 102 SRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQ 161
           +RDIISWNTVF G S+EN   EIV+LFGKFM+EGMKPNHITFS LFR CGVLLD +LGFQ
Sbjct: 304 TRDIISWNTVFVGSSNEN---EIVDLFGKFMIEGMKPNHITFSVLFRQCGVLLDSRLGFQ 363

Query: 162 FFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSF 221
           FFSLAVHLGFL E+ V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQLILAYSLNSF
Sbjct: 364 FFSLAVHLGFLDETRVLSSIISMFSQIGLMEMVHSVFDSLVFKPVSAWNQLILAYSLNSF 423

Query: 222 DMEALRTFSSL---GVEANEYTY---------------------------------VSCS 281
           +MEA RTFSSL   GV ANEYTY                                 VSCS
Sbjct: 424 EMEAFRTFSSLLRYGVVANEYTYSIIVETACKSENPRICRQLHCASLKAGFGSHKYVSCS 483

Query: 282 LMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPD 341
           L+KCYI+IG LESSFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES +KPD
Sbjct: 484 LIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNHIYEAIMFLNILMESGKKPD 543

Query: 342 EFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFE 401
           EF   SILNGCSS AAYHQTKAIHSL EKMGFG+HVHVASAIIDAYAKCGDIGSAQ AFE
Sbjct: 544 EFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGVHVHVASAIIDAYAKCGDIGSAQGAFE 603

Query: 402 KSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIE 461
           +S +SND+IVYNSM+MAYAHHGLAW+AIQ FEK+R A +QPSQA+FVSVISAC H+GL+E
Sbjct: 604 QSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACGHIGLVE 663

Query: 462 QGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSG 521
           QGRSLF+TMKS+Y++TPSRDNYGCLVDML+RNGFLYDARY+IESMPFSPWPAILRSLLSG
Sbjct: 664 QGRSLFQTMKSDYSMTPSRDNYGCLVDMLARNGFLYDARYIIESMPFSPWPAILRSLLSG 723

Query: 522 CRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDP 550
           CRIYGNRELG+WTAEKLLS+APQNDA +VLLSKVY+EGNSWEDAA IRK MTDR VLKDP
Sbjct: 724 CRIYGNRELGQWTAEKLLSMAPQNDATYVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDP 783

BLAST of Cp4.1LG01g10250 vs. NCBI nr
Match: gi|659090201|ref|XP_008445888.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 813.1 bits (2099), Expect = 3.0e-232
Identity = 418/546 (76.56%), Postives = 460/546 (84.25%), Query Frame = 1

Query: 42  TIAAALSLSE--NDLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQ 101
           TI +A+       DLDSGKELHGFILR  L ST  MNALMDMYFI+ RKNSALKTFNSMQ
Sbjct: 97  TIVSAIKACSLIQDLDSGKELHGFILRRGLISTAVMNALMDMYFISDRKNSALKTFNSMQ 156

Query: 102 SRDIISWNTVFGGFSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQ 161
           +RDIISWNTVF G S+EN   EIV+LFGKFM+EGMKPNHITFS LFR CGVLLD +LGFQ
Sbjct: 157 TRDIISWNTVFVGSSNEN---EIVDLFGKFMIEGMKPNHITFSVLFRQCGVLLDSRLGFQ 216

Query: 162 FFSLAVHLGFLYESSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSF 221
           FFSLAVHLGFL E+ V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQLILAYSLNSF
Sbjct: 217 FFSLAVHLGFLDETRVLSSIISMFSQIGLMEMVHSVFDSLVFKPVSAWNQLILAYSLNSF 276

Query: 222 DMEALRTFSSL---GVEANEYTY---------------------------------VSCS 281
           +MEA RTFSSL   GV ANEYTY                                 VSCS
Sbjct: 277 EMEAFRTFSSLLRYGVVANEYTYSIIVETACKSENPRICRQLHCASLKAGFGSHKYVSCS 336

Query: 282 LMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPD 341
           L+KCYI+IG LESSFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES +KPD
Sbjct: 337 LIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNHIYEAIMFLNILMESGKKPD 396

Query: 342 EFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFE 401
           EF   SILNGCSS AAYHQTKAIHSL EKMGFG+HVHVASAIIDAYAKCGDIGSAQ AFE
Sbjct: 397 EFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGVHVHVASAIIDAYAKCGDIGSAQGAFE 456

Query: 402 KSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIE 461
           +S +SND+IVYNSM+MAYAHHGLAW+AIQ FEK+R A +QPSQA+FVSVISAC H+GL+E
Sbjct: 457 QSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACGHIGLVE 516

Query: 462 QGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSG 521
           QGRSLF+TMKS+Y++TPSRDNYGCLVDML+RNGFLYDARY+IESMPFSPWPAILRSLLSG
Sbjct: 517 QGRSLFQTMKSDYSMTPSRDNYGCLVDMLARNGFLYDARYIIESMPFSPWPAILRSLLSG 576

Query: 522 CRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDP 550
           CRIYGNRELG+WTAEKLLS+APQNDA +VLLSKVY+EGNSWEDAA IRK MTDR VLKDP
Sbjct: 577 CRIYGNRELGQWTAEKLLSMAPQNDATYVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDP 636

BLAST of Cp4.1LG01g10250 vs. NCBI nr
Match: gi|778704206|ref|XP_011655494.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 793.1 bits (2047), Expect = 3.2e-226
Identity = 410/534 (76.78%), Postives = 447/534 (83.71%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGG 112
           DLDSGKELHGFILR  L ST  MNALMDMY I+ RKNS LK FNSMQ+RDIISWNTVFGG
Sbjct: 110 DLDSGKELHGFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGG 169

Query: 113 FSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYE 172
            S+E   KEIV+LFGKF++EGMKPNHITFS LFR CGVLLD +LGFQFFSLAVHLG L E
Sbjct: 170 SSNE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGCLDE 229

Query: 173 SSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSL-- 232
           + V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQ ILAYSLNSF+MEA RTFSSL  
Sbjct: 230 TRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLR 289

Query: 233 -GVEANEYT---------------------------------YVSCSLMKCYIIIGFLES 292
            GV ANEYT                                 YVSCSL+KCYI+IG LES
Sbjct: 290 YGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLES 349

Query: 293 SFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSS 352
           SFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES +KPDEF   SILNGCSS
Sbjct: 350 SFEIFNQLEIVDMATYGAVISTLVHQNHMYEAIMFLNILMESGKKPDEFTFGSILNGCSS 409

Query: 353 SAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNS 412
            AAYHQTKAIHSL EKMGFG HVHVASAIIDAYAKCGDIGSAQ AFE+S +SND+IVYNS
Sbjct: 410 RAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNS 469

Query: 413 MIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEY 472
           M+MAYAHHGLA +AIQ FEK+R A +QPSQA+FVSVISAC H+GL+EQGRSLF+TMKS+Y
Sbjct: 470 MMMAYAHHGLACEAIQTFEKMRIAKVQPSQASFVSVISACRHMGLVEQGRSLFQTMKSDY 529

Query: 473 NITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWT 532
           N+TPSRDNYGCLVDMLSRNGFLYDARY+IESMPFSPWPAILRSLLSGCRIYGN ELG+WT
Sbjct: 530 NMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNVELGQWT 589

Query: 533 AEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
           AEKLLSLAPQN A  VLLSKVY+EGNSWEDAA IRK MTDR VLKDPGYSR E+
Sbjct: 590 AEKLLSLAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDPGYSRVEI 640

BLAST of Cp4.1LG01g10250 vs. NCBI nr
Match: gi|778704196|ref|XP_011655491.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X1 [Cucumis sativus])

HSP 1 Score: 793.1 bits (2047), Expect = 3.2e-226
Identity = 410/534 (76.78%), Postives = 447/534 (83.71%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGG 112
           DLDSGKELHGFILR  L ST  MNALMDMY I+ RKNS LK FNSMQ+RDIISWNTVFGG
Sbjct: 257 DLDSGKELHGFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGG 316

Query: 113 FSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYE 172
            S+E   KEIV+LFGKF++EGMKPNHITFS LFR CGVLLD +LGFQFFSLAVHLG L E
Sbjct: 317 SSNE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGCLDE 376

Query: 173 SSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSLNSFDMEALRTFSSL-- 232
           + V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQ ILAYSLNSF+MEA RTFSSL  
Sbjct: 377 TRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLR 436

Query: 233 -GVEANEYT---------------------------------YVSCSLMKCYIIIGFLES 292
            GV ANEYT                                 YVSCSL+KCYI+IG LES
Sbjct: 437 YGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLES 496

Query: 293 SFEIFNELESVDMATWGAVISALVHQNHTYEAFMFLNVLMESDEKPDEFILSSILNGCSS 352
           SFEIFN+LE VDMAT+GAVIS LVHQNH YEA MFLN+LMES +KPDEF   SILNGCSS
Sbjct: 497 SFEIFNQLEIVDMATYGAVISTLVHQNHMYEAIMFLNILMESGKKPDEFTFGSILNGCSS 556

Query: 353 SAAYHQTKAIHSLAEKMGFGLHVHVASAIIDAYAKCGDIGSAQRAFEKSGESNDIIVYNS 412
            AAYHQTKAIHSL EKMGFG HVHVASAIIDAYAKCGDIGSAQ AFE+S +SND+IVYNS
Sbjct: 557 RAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNS 616

Query: 413 MIMAYAHHGLAWQAIQVFEKIRNANLQPSQATFVSVISACAHVGLIEQGRSLFRTMKSEY 472
           M+MAYAHHGLA +AIQ FEK+R A +QPSQA+FVSVISAC H+GL+EQGRSLF+TMKS+Y
Sbjct: 617 MMMAYAHHGLACEAIQTFEKMRIAKVQPSQASFVSVISACRHMGLVEQGRSLFQTMKSDY 676

Query: 473 NITPSRDNYGCLVDMLSRNGFLYDARYVIESMPFSPWPAILRSLLSGCRIYGNRELGRWT 532
           N+TPSRDNYGCLVDMLSRNGFLYDARY+IESMPFSPWPAILRSLLSGCRIYGN ELG+WT
Sbjct: 677 NMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNVELGQWT 736

Query: 533 AEKLLSLAPQNDAAFVLLSKVYTEGNSWEDAAKIRKGMTDREVLKDPGYSREEL 551
           AEKLLSLAPQN A  VLLSKVY+EGNSWEDAA IRK MTDR VLKDPGYSR E+
Sbjct: 737 AEKLLSLAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDPGYSRVEI 787

BLAST of Cp4.1LG01g10250 vs. NCBI nr
Match: gi|700195264|gb|KGN50441.1| (hypothetical protein Csa_5G174670 [Cucumis sativus])

HSP 1 Score: 766.9 bits (1979), Expect = 2.5e-218
Identity = 392/503 (77.93%), Postives = 432/503 (85.88%), Query Frame = 1

Query: 53  DLDSGKELHGFILRHRLTSTEPMNALMDMYFINGRKNSALKTFNSMQSRDIISWNTVFGG 112
           DLDSGKELHGFILR  L ST  MNALMDMY I+ RKNS LK FNSMQ+RDIISWNTVFGG
Sbjct: 180 DLDSGKELHGFILRRGLISTAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGG 239

Query: 113 FSDENDAKEIVNLFGKFMLEGMKPNHITFSSLFRVCGVLLDCKLGFQFFSLAVHLGFLYE 172
            S+E   KEIV+LFGKF++EGMKPNHITFS LFR CGVLLD +LGFQFFSLAVHLG L E
Sbjct: 240 SSNE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGCLDE 299

Query: 173 SSVVSSMLSMFAQCGLMEMVLSVFDSLVFKPISAWNQLILAYSL-----NSFDMEALRTF 232
           + V+SS++SMF+Q GLMEMV SVFDSLVFKP+SAWNQ ILAY       N +    L   
Sbjct: 300 TRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYKTACKFENPWMCRQLHC- 359

Query: 233 SSLGVEANEYTYVSCSLMKCYIIIGFLESSFEIFNELESVDMATWGAVISALVHQNHTYE 292
           +S+      + YVSCSL+KCYI+IG LESSFEIFN+LE VDMAT+GAVIS LVHQN+ YE
Sbjct: 360 ASMKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYE 419

Query: 293 AFMFLNVLMESDEKPDEFILSSILNGCSSSAAYHQTKAIHSLAEKMGFGLHVHVASAIID 352
           A MFLN LMES +KPDEF   SILNGCSS AAYHQTKAIHSL EKMGFG HVHVASAIID
Sbjct: 420 AIMFLNFLMESGKKPDEFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGFHVHVASAIID 479

Query: 353 AYAKCGDIGSAQRAFEKSGESNDIIVYNSMIMAYAHHGLAWQAIQVFEKIRNANLQPSQA 412
           AYAKCGDIGSAQ AFE+S +SND+IVYNSM+MAYAHHGLA +AIQ FEK+R A +QPSQA
Sbjct: 480 AYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLACEAIQTFEKMRIAKVQPSQA 539

Query: 413 TFVSVISACAHVGLIEQGRSLFRTMKSEYNITPSRDNYGCLVDMLSRNGFLYDARYVIES 472
           +FVSVISAC H+GL+EQGRSLF+TMKS+YN+TPSRDNYGCLVDMLSRNGFLYDARY+IES
Sbjct: 540 SFVSVISACRHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIES 599

Query: 473 MPFSPWPAILRSLLSGCRIYGNRELGRWTAEKLLSLAPQNDAAFVLLSKVYTEGNSWEDA 532
           MPFSPWPAILRSLLSGCRIYGN ELG+WTAEKLLSLAPQNDA  VLLSKVY+EGNSWEDA
Sbjct: 600 MPFSPWPAILRSLLSGCRIYGNVELGQWTAEKLLSLAPQNDATHVLLSKVYSEGNSWEDA 659

Query: 533 AKIRKGMTDREVLKDPGYSREEL 551
           A IRK MTDR VLKDPGYSR E+
Sbjct: 660 ANIRKEMTDRGVLKDPGYSRVEI 678

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP172_ARATH2.3e-7530.28Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH3.0e-7030.19Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP311_ARATH8.1e-6829.75Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN... [more]
PP280_ARATH1.4e-6727.59Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
PP307_ARATH1.2e-6627.34Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KV18_CUCSA2.3e-22676.78Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577950 PE=4 SV=1[more]
A0A0A0KRW0_CUCSA1.7e-21877.93Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174670 PE=4 SV=1[more]
F6HIN1_VITVI1.5e-15052.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00130 PE=4 SV=... [more]
V4TM25_9ROSI1.1e-14550.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030859mg PE=4 SV=1[more]
B9HPK8_POPTR3.6e-13949.91Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s03250g P... [more]
Match NameE-valueIdentityDescription
AT2G27610.11.3e-7630.28 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.11.7e-7130.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G14820.14.5e-6929.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53360.17.7e-6927.59 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G13650.16.6e-6827.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659090199|ref|XP_008445887.1|3.0e-23276.56PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X1... [more]
gi|659090201|ref|XP_008445888.1|3.0e-23276.56PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-... [more]
gi|778704206|ref|XP_011655494.1|3.2e-22676.78PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial-... [more]
gi|778704196|ref|XP_011655491.1|3.2e-22676.78PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X1... [more]
gi|700195264|gb|KGN50441.1|2.5e-21877.93hypothetical protein Csa_5G174670 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g10250.1Cp4.1LG01g10250.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 176..199
score: 0.034coord: 343..364
score: 1.1coord: 76..103
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 370..417
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 408..441
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 268..302
score: 7.925coord: 303..337
score: 5.974coord: 102..136
score: 8.999coord: 405..435
score: 8.002coord: 338..368
score: 6.27coord: 71..101
score: 7.026coord: 441..475
score: 6.39coord: 370..404
score: 10.797coord: 172..206
score: 6.84coord: 507..541
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 337..397
score: 1.2E-5coord: 205..248
score: 1.2E-5coord: 501..529
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 238..548
score: 4.4E-198coord: 53..137
score: 4.4E
NoneNo IPR availablePANTHERPTHR24015:SF715SUBFAMILY NOT NAMEDcoord: 238..548
score: 4.4E-198coord: 53..137
score: 4.4E

The following gene(s) are paralogous to this gene:

None