Cp4.1LG01g10050 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g10050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane protein, putative
Location	Cp4.1LG01 : 6976481 .. 6980631 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTCTCTCTCTCTCAAATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGTGGCGGTAAAAGCTTCACTCGATTTTGAAATTTCTGCGACATTTTAGAATCTGAATGCGTAAACATTTTAATTTCTATTATCATCTTCCCGAATTGTTATTCTTCAGGGTTCGAATAAACTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGAATAACATTTTTGTTAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGTAAGTGTTTCTCAGTGAATTGGCAAAACAGCAATCTCCTTCACTTTCTGCAGTTTAATTCTTTCGTTCTATGGTGTTTTGTCCACTTGCTTCAGAATCTACGCCCTAATTTTTGGGGGTGGTTTCTGTGTTGTTTTGCTTATTGATGTCTCTTTCCAATTGAATTGTTCGGTCCGCGGAGCGATAATAATGTTTCAAACTTCTAATTGCCCTGGTTTTGCACCCTCTGAGTACCATCATGTCTTTCTTTTGTCTAATTGGCAATGAATGCTATGGTATGCTTGGTTCTATGCATTCCATTTGGCCCCATCACTGTTTTCGTTTGAATTGGGTTATAATTTCTTATATTTCGGAACTGAAACTTCTATGAAGTCGCTGGAAGATTATTTCTATGAAGATTTTTTGCATGTTTAAGTGTTGGTTTACTTTCTATTGACTTCAGTTGTTTATATGAATAGAATGTGGCAGTAAGTGAAATTTTAGGCACGAATGTTCCTGCATTTGGACAAGCGTATGTATTACTGATTAGATACTGCCAATGTCCTGTTATAGGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTATGGCATAAAAAACCGAACCTATGAACTCATGGTTGAGTCTTGATGCATTCAGTGAACTTTAGATTTTCAAATGTCATATTCTTGATTAAGAACTTACGAATTCTCATCCCTTTCCTTCTCTCTCTTGTTAGGTTCGATGGAAAAGAATGAAAATCATAAAAAACATCCGCGAAAATCAATCGAGTACTACTACTACTTGCCTTGCATATATTTGGTGAATTCTAAGGCTACTGCTTTTTTCTGTTAATAATGCAATGGAGGTGGTGAGACCTTCCTTTTTCTGCTCAATCTCTCTCTACTCTTTAGTTTCTAATCAAAGTCATACTTGTACAACAAAGCTTAGCAACAAAAATAGTCTACTTCATGTTCCACTAATATTTGTACTGTTTTGTTGGTTATTGTCATTTTTAGTTTATATTGGTAGATTATTTTACATTTAAGAAAAAAGGGGGTCTCAGAATATATTTGATCCCCTAAGAATAAGTCATATCAAAGAGCAAGTCAAAGCCCTCAGACAGGCAATTTTTCATATTTATTTTTTATAATATCATTACTTATTGGTCAAGTCAAGTCAGCTTTGCGATTCTAGAATTTTGCAGTACATAAATGTTGGGTACAAAATACATAAAGTTATAAATTGAAAAGGAAACAAAGTTTCCATTTAGCAACCACATGAAATAAAACAGAGATCTTCTTGGCCTTATCAAAATGTTACAAAGATCTCCTTGGCTCTATTGAAAGGAAACGAAGAACTCTTCTTGCCTTTACCGAAATGAAACAAAATCTGCTTGACTTTATCGAAAGGAAACAAAGTTCTTCTTGGCCTTATTGAAATGAAACAAATATCTTATCGACTTTATCTTATTGGACGCATCAGTGCATACTTCATATTAGGCATACATCAGTCTTGGAGACATTACATTTCATTTTCGCTCATTTATTCTAGTATACGTTCATCTTGTAGGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGGTGAGTCCATTTCTATTTTTACTACTTAGTTACTACTATTATGAATTGTTACTACGTAGGAGAGACTTAAAGGCTTCATAAGTTTAGGAGGTTATTTGGTATGCGTGTTGGTGATTAGAATTGGATGTTCGGGGATGGCAATGATAGGAACCAGATGATTAGGCTTGGAAATTGTATATAGATAGGTAAGAATTAAGAAACTACAGTAAGATGTTTGAAAGCAATTCTTGGAAGTTGGATGCTTCCACCTCCCTCAACCCGATCAATTTAGTGGGACTCTGATTAAAAACACCTTTACCACCGATCAGTGGGCGATAATTTATTTTATGTTATTATTATTTAAAAATAATAATAATAGCACTCTCTATGTCATACTATTGTTTGTCTTCTGTTTATTTCTTCACTCTTCCATTAGCAGTGTACTCGGTCATGTTATCATATTATTTATTTGCATTTTAGGTTCTACATTGCACCACCACCTGCGAAAATGGGCTATGTTGCAGCTGCTGGAAGGTGAAAAACTTTATTGTAGGAGGCCCTTTCTATATGGCTAGTTGCTTTACTCCTTTTGTTGGGCTATCATTTTGGTCGTTTTCTTTCATTTTTCTCAATGAAAGCTTGGTTTTATATCGAAAAAAATATTTGTGTAGGATGGAGTTTTATAATAAGACATTGACACATAATAATCTTGTAGATTTCTCAAGATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTGGCAAGAGCGGCAGGGTGAGCTCTTATATTCCTGCTTTTTATCTATTACTATTCTGGTACGTGATTCTGCTCATCATTAAACAACCCAACTATATGAAGAGAACTGTAAGCCAAGTTAAATGCTTGCATTTTTTTTCCAACTTCCATAACTTAGAAAGGCCTACTTGATAACATCTTTGTTTTCAGTCTTCTATATTTATAATTACGCTCCTGTAACAACCCAAACCCACTACTAGTAGATATTGTTCTCTTTGGTTTTTTCCTTTCGGACTTCCCTTCAAGGTTCTAGGGAGAAGTTTCCACACCCTCATAAAAAATGTTTCGTTCTCCTCTTTAACTGATATGAGATCTCACAATCCATCCCCTTCGGGCCCAGCGTCCTCGTTGGCATTCATTCCCTTCTCCAATTGATGTGGGACTCCCCAATCCACCCCCTTCGGGGCCTAGTGTCCTTGCTGGCACACCGCCTCTTGTCCACCCCCCTTTGGAGCTCAACCTCCTCGTTGGCACATCGCCCGATGTCTGGCTCTGATACCATTTGTAACAGCCCAATTCCACCTTTAGCAGATATTGTCCTCTTTGAGTTTTCCCATTCGGGCTTCTCCTCAAGGTTTTTAAAACGCATCTGCTAGGGTTAGGTTTCACACTCTTATAAAGAATGTTTCGTTCTACTCCCCAACCGACGTGGGATCTCACAACTCATTTGCTCTTTTAAATCTATTTTCAAGATTGATTTTGTTAAAAAAAAAATATATTTAAAATCTGGTCAGTATTTTAAAAAATAGTAGTTCTACAAGTTTAATTCTCAAGAACAGAATCAAAAGTCGTCGGATATTAAATCTCACTCCCATTTCAATTCCTAAAACGAGGAAGCAACTTGTTAAAACCAAAGCTTCTCATTCATGCAGAGCTCTTGCTATGGCGCCGTTCGTCGACAGAGGATTGTCGTGGTTCACGGTCAAATACAACTTCAAGTCTCAGGGGAAGGTTACTAGAAACGAAACTTCAATACATCCATTGTGTTTTTTGTTTCATTTCATTGATATTATGCTCAAAATTAACCCATCTCCAGGCAGTTGTGGCGATTGTTGGATTCTGCTTAGGATTGTCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAAGACAGGTTCTTCCCTTGGAAAGTAAGTACTTTTTCTCTCACATCATTCATTACCCTATTCCCAATGAGTGTTTCCTTGTCCTCAATATTGAAGGCTATCACCTTTTTTTTCTTCCTTAAAAATTAAACTTTCCAATATTTTAAAACATAGGGTGGAGGTTTAACCAAAACGATATGTTTTATCAACGAGATTGTCGTTATTGTCGAGAATATGTTACACAATTCAAATTTAGGTTTGAATTTTCATATTTCAATCTTTACCCTTCGTTGTTGAAACGGT

mRNA sequence

TCCTCTCTCTCTCTCTCAAATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGTGGCGGGTTCGAATAAACTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGAATAACATTTTTGTTAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTTCGATGGAAAAGAATGAAAATCATAAAAAACATCCGCGAAAATCAATCGAGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGATTTCTCAAGATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTGGCAAGAGCGGCAGGAGCTCTTGCTATGGCGCCGTTCGTCGACAGAGGATTGTCGTGGTTCACGGTCAAATACAACTTCAAGTCTCAGGGGAAGGCAGTTGTGGCGATTGTTGGATTCTGCTTAGGATTGTCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAAGACAGGTTCTTCCCTTGGAAAGTAAGTACTTTTTCTCTCACATCATTCATTACCCTATTCCCAATGAGTGTTTCCTTGTCCTCAATATTGAAGGCTATCACCTTTTTTTTCTTCCTTAAAAATTAAACTTTCCAATATTTTAAAACATAGGGTGGAGGTTTAACCAAAACGATATGTTTTATCAACGAGATTGTCGTTATTGTCGAGAATATGTTACACAATTCAAATTTAGGTTTGAATTTTCATATTTCAATCTTTACCCTTCGTTGTTGAAACGGT

Coding sequence (CDS)

ATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGTGGCGGGTTCGAATAAACTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGAATAACATTTTTGTTAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTTCGATGGAAAAGAATGAAAATCATAAAAAACATCCGCGAAAATCAATCGAGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGA

Protein sequence

MPTPLKLTNGAIPCVVFPVAGSNKLQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVV

Homology

[Close]

BLAST of Cp4.1LG01g10050 vs. TrEMBL
Match: A0A0A0KRT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G582220 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.8e-30
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 1


Query: 47  VSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRY 106
           VSRNPS+R CL+NA+ISANDPLKSE+ FSNHE EGSMEKNEN +KHP+KS EVLDKLRRY
Sbjct: 38  VSRNPSVRFCLSNAKISANDPLKSEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRY 97

Query: 107 GVSGILSYGLLNTVYYLTTFLVV 130
           G+SGILSYGLLNTVYYLTTFLVV
Sbjct: 98  GLSGILSYGLLNTVYYLTTFLVV 120

[Close]

BLAST of Cp4.1LG01g10050 vs. TrEMBL
Match: V4T7M1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 58  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 117

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 118 LLNTAYYLTTFLLV 129

[Close]

BLAST of Cp4.1LG01g10050 vs. TrEMBL
Match: V4V1A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 58  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 117

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 118 LLNTAYYLTTFLLV 129

[Close]

BLAST of Cp4.1LG01g10050 vs. TrEMBL
Match: V4T2E7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 67  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 126

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 127 LLNTAYYLTTFLLV 138

[Close]

BLAST of Cp4.1LG01g10050 vs. TrEMBL
Match: V4SD90_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 58  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 117

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 118 LLNTAYYLTTFLLV 129

[Close]

BLAST of Cp4.1LG01g10050 vs. TAIR10
Match: AT2G38695.3 (AT2G38695.3 unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 5.8e-09
Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 1


Query: 62  ISANDPLKSENGFSNHETEGSM-EKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTV 121
           +S N   KS+        EG M +KN   KK+P  S E+L KL+RYG+SGILSYGLLNTV
Sbjct: 52  LSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTV 111

Query: 122 YYLTTFLVV 130
           YY T FL+V
Sbjct: 112 YYSTAFLLV 120

[Close]

BLAST of Cp4.1LG01g10050 vs. NCBI nr
Match: gi|659090269|ref|XP_008445925.1| (PREDICTED: uncharacterized protein LOC103488806 [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 3.3e-30
Identity = 75/97 (77.32%), Postives = 83/97 (85.57%), Query Frame = 1


Query: 36  PFRVSKPNN---IFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKH 95
           P R S P +     VSRNPS+R CL+NA+ISANDPLKSE+ FSNHETEGSMEKNEN +KH
Sbjct: 24  PRRFSPPQSRIRFSVSRNPSVRLCLSNAKISANDPLKSEDDFSNHETEGSMEKNENRQKH 83

Query: 96  PRKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVV 130
           P+KS EVLDKLRRYG+SGILSYGLLNT YYLTTFLVV
Sbjct: 84  PQKSNEVLDKLRRYGLSGILSYGLLNTAYYLTTFLVV 120

[Close]

BLAST of Cp4.1LG01g10050 vs. NCBI nr
Match: gi|700196412|gb|KGN51589.1| (hypothetical protein Csa_5G582220 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 1


Query: 47  VSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRY 106
           VSRNPS+R CL+NA+ISANDPLKSE+ FSNHE EGSMEKNEN +KHP+KS EVLDKLRRY
Sbjct: 38  VSRNPSVRFCLSNAKISANDPLKSEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRY 97

Query: 107 GVSGILSYGLLNTVYYLTTFLVV 130
           G+SGILSYGLLNTVYYLTTFLVV
Sbjct: 98  GLSGILSYGLLNTVYYLTTFLVV 120

[Close]

BLAST of Cp4.1LG01g10050 vs. NCBI nr
Match: gi|449458791|ref|XP_004147130.1| (PREDICTED: uncharacterized protein LOC101220699 isoform X5 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 1


Query: 47  VSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRY 106
           VSRNPS+R CL+NA+ISANDPLKSE+ FSNHE EGSMEKNEN +KHP+KS EVLDKLRRY
Sbjct: 38  VSRNPSVRFCLSNAKISANDPLKSEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRY 97

Query: 107 GVSGILSYGLLNTVYYLTTFLVV 130
           G+SGILSYGLLNTVYYLTTFLVV
Sbjct: 98  GLSGILSYGLLNTVYYLTTFLVV 120

[Close]

BLAST of Cp4.1LG01g10050 vs. NCBI nr
Match: gi|567879547|ref|XP_006432332.1| (hypothetical protein CICLE_v10002366mg [Citrus clementina])

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 58  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 117

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 118 LLNTAYYLTTFLLV 129

[Close]

BLAST of Cp4.1LG01g10050 vs. NCBI nr
Match: gi|567879545|ref|XP_006432331.1| (hypothetical protein CICLE_v10002366mg [Citrus clementina])

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 56  CLNNAEISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYG 115
           CL NA+ +A+    S+ G  +   EGSMEK+E+ +K    S EVL KLRRYG+SGILSYG
Sbjct: 58  CLINADSNADG--FSDAGNYSANDEGSMEKSESSQKESFSSKEVLKKLRRYGISGILSYG 117

Query: 116 LLNTVYYLTTFLVV 130
           LLNT YYLTTFL+V
Sbjct: 118 LLNTAYYLTTFLLV 129

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g10050 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g10050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRT8_CUCSA	8.8e-30	85.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G582220 PE=4 SV=1	[more]
V4T7M1_9ROSI	1.0e-09	59.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1	[more]
V4V1A7_9ROSI	1.0e-09	59.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1	[more]
V4T2E7_9ROSI	1.0e-09	59.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1	[more]
V4SD90_9ROSI	1.0e-09	59.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002366mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g10050 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38695.3	5.8e-09	55.07	unknown protein	[more]

BLAST of Cp4.1LG01g10050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090269\|ref\|XP_008445925.1\|	3.3e-30	77.32	PREDICTED: uncharacterized protein LOC103488806 [Cucumis melo]	[more]
gi\|700196412\|gb\|KGN51589.1\|	1.3e-29	85.54	hypothetical protein Csa_5G582220 [Cucumis sativus]	[more]
gi\|449458791\|ref\|XP_004147130.1\|	1.3e-29	85.54	PREDICTED: uncharacterized protein LOC101220699 isoform X5 [Cucumis sativus]	[more]
gi\|567879547\|ref\|XP_006432332.1\|	1.4e-09	59.46	hypothetical protein CICLE_v10002366mg [Citrus clementina]	[more]
gi\|567879545\|ref\|XP_006432331.1\|	1.4e-09	59.46	hypothetical protein CICLE_v10002366mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g10050.1	Cp4.1LG01g10050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34370	FAMILY NOT NAMED	coord: 78..129 score: 3.3
None	No IPR available	PANTHER	PTHR34370:SF2	SUBFAMILY NOT NAMED	coord: 78..129 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g10050	Cucsa.281190	Cucumber (Gy14) v1	cgycpeB0736
Cp4.1LG01g10050	CmaCh04G012870	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g10050	CmoCh04G013540	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g10050	Csa5G582220	Cucumber (Chinese Long) v2	cpecuB418
Cp4.1LG01g10050	MELO3C011782	Melon (DHL92) v3.5.1	cpemeB376
Cp4.1LG01g10050	CSPI05G20570	Wild cucumber (PI 183967)	cpecpiB417
Cp4.1LG01g10050	Lsi04G007580	Bottle gourd (USVL1VR-Ls)	cpelsiB358
Cp4.1LG01g10050	MELO3C034053.2	Melon (DHL92) v3.6.1	cpemedB436
Cp4.1LG01g10050	CsaV3_5G029340	Cucumber (Chinese Long) v3	cpecucB0520
Cp4.1LG01g10050	CsGy5G020080	Cucumber (Gy14) v2	cgybcpeB628
Cp4.1LG01g10050	Carg02031	Silver-seed gourd	carcpeB1177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g10050	Cucurbita pepo (Zucchini)	cpecpeB036
Cp4.1LG01g10050	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g10050	Cucurbita maxima (Rimu)	cmacpeB434
Cp4.1LG01g10050	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g10050	Cucurbita moschata (Rifu)	cmocpeB399
Cp4.1LG01g10050	Bottle gourd (USVL1VR-Ls)	cpelsiB352
Cp4.1LG01g10050	Watermelon (Charleston Gray)	cpewcgB357
Cp4.1LG01g10050	Watermelon (97103) v1	cpewmB456
Cp4.1LG01g10050	Silver-seed gourd	carcpeB1020
Cp4.1LG01g10050	Silver-seed gourd	carcpeB1021
Cp4.1LG01g10050	Wax gourd	cpewgoB0556