Cp4.1LG01g09990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g09990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG01 : 6963757 .. 6968082 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCTTTGGTGGTCTAAAAGATTGCCGTCTGCTTGGCCTGGTTGCCGCCTCAACCCATCCCCATTCCATCCCCAGCGGAAACTTGGTTCTTCACTTCCAAAATTTTTATCTGCGAATTTTTCTCTGAAATTAGGGTTTCAGTTTGTTAAATCCCTAATCATATCGTCTATGCTCGTGTTAATGATTCCGAAAATCACTTCCATGTTCCTTTCGAAGTACCGCTGCAACTACTGCAAGTTGAATTTCTGTTATCGGAGCTGAGTTCGGGAGGGATTTTCTTCCGCTTTTCTGCATTTTTCTCGATCAATCGGGCCCGTCATTGAGCCTTCAGTATTTCATCGTTCTTCTGAGGCCTCTGCCATTTTGGCGCCTTCAACTTTTGAGTGCCTTGGCTGCTTCATCTCGTCATCTCCGCATGGTTCAGGTATGTTAGTGTTATGAACGCATATAGTGTATTTCAAATTCTGAGAGCAGCTTGAATGTTGTAACTTGCATTCTTTAGTCGAAGTTTCCGATTTTTGTGATGAATGTACTGGGGATGTTTTGCAATGAACAGATAAGAGAAATATGGTGATGAAAATTAAATATTGAGTCAACATTGTTGTGTCTGCTTTCAAAGGGGATTAGGATTTCATGCCATCGCCATTCAATTTATATACCAGCTTTGAAATTTTGATGGCTATGTTCTTCATAAAGAGCTTTGTAATCAGAAGAATCATGATGGGTCGTATGATATATGGCTACTTTTCTTATTTAGCTCATTTGTTTCTAGTTTCTGATTCTTCATGAAGAGTGCATTTTCAATAATAAATTTCTGCTCCAAGCTCAACTTTGGAAGAAAAAGACCATGCAGATATTTTGCAACTGCCAATTCTGCGTTGTCTTCTTTCAACTATGCGGACGAGGACTGCTTTACTTCTGAACTTCCTGCTGCTACTAACTCTGATGTTGACTCTGACGAACAAAATTATTTTGGCAATGACGTTCAAGTTTCGAAACGCCTGAAAGCTGATGATCATGAAATGAAACTGATAAAATTGATACTTGGGAACCATGGGTTTAATCTTGGTTCGCATCCAAAACAATTGGAGATCGTAAGGATTTTGGATATTCTATTTGAGGAGAGTTCAGATGCACGACTTTGTCTTTACTACTTCAAATGGTCAGGATGTTTATCTGGATCTAATCGGTCGCTGGAGTCAATCTGTAGGATGATGCATATTTTGGTTGCTGGGAATATGAATCATAGGGCAGTTGATTTAATGTCACATCTTGTTAAAAATTATGGTAGTAAAGAGGGCTTTTCAACTATATTGCTGAAACTTTTCTATGAAACACACCATGAAAGGAAGACTTTAGAAACCACATGTAGCATGCTGGTTGACTGTTACATCAAGGAAAGAATGGTAACGGCTGCTCTTATATTGATGGGTCAAATGAAGAGCTTCGACATATTTCCTTCTATATGGGTATACAAGGCGGTGATACAAGCTTTATTACAAACGAATCAGTCGGAGTCAGCCTGGGATCTTCTAGAAGAAATGCATAGGCAAGGTATAAGTTTAAATTATTCGATTAATCTATTTATTTATCATTATTGTGCAAAAGGTAATCTGAGCAGGGGGTGGAAAGTGCTTTTGGAGTTGAGGAAATTCGGATCGAAGCCTGATGCAGTTGATTACACAATTGTGATCAACTCACTATGCAAAATCTCTCTTTTAAAAGAAGCCACTGCCTTGTTGTTTAAAATGACTGCTTTTGGTGTTTCCCCTGATTCCGTTACGATGAGTTCTGTTATCGATGGTTATTGTAAACTAGGAAAGTTGGATATAGCTTGTAAAATATTGAAGTATTTTAGGCGTCCCTTAAATATTTTTATATACAATAGCTTTATAACGAAGTTATGTAGGGAAGGAAACACGGTAAAAGCTTCTGAAGTTTTTCTTGAAATGTCTGAGGTGGGCTTAGTTCCTGACTGTGTTAGTTACACAACCATGATAGGAGGCTATTGTAAAGTGGGAAACGTAAACAGAGCATTTTCTTTCCTGGGGAAGATGTTAAAAAGTGGAATACGACCTTCCGTTATCACGTATACTTTGTTCATTGATTACTTTTGCAAGTGTCGAGATGTGGAAATGGCTGAAGTTATGCTCCAAAAGATGATTATTGAGGGTTTAAAACCCGATGTTGTCACGTATAATATTTTGATGGATGGATATGGAAAGAAGGGCTACTTGCATAAGGCTTTTGAACTTCTCGATACGATGAGATCTACAAATCTTACGCCTGATGTTGTGACGTATAACACTCTCATTAATGGTCTCGTTACGCGAGGGTTTCTTCAAGAGGCAAAGGATATGTTAGATGAGCTCAACAGGAGGGGTTTCAATATAGATGTTGTCACATACACTAATATCATACATGGATATTCGAAAAGGGGAAACTTTGAGGAAGCTTTTCTTGTTTGGTTTCATATGACTGACAACTGTGTAAAGCCTGATGTTGTTACTTGCAGTGCTCTTCTTAGTGGGTATTGTCGAGAACGGCGTATAGACGAAGCAAATGCTCTATTTTGTAAAATGCTGGACATTGGGTTAAATCCAGACTTGATATTGTACAATACTCTAATTCATGGATTTTGCAGTGTTGGTAATGTGGATGAAGGTTGCAATTTGGTAAAGAAGATGATCGAAAACAGTATCCTTCCGAACAATGTTACTCATCGTGCACTTGTCCTCGGATTTCAGAAAAGGAAGGTTATCGATCCAATAGAGAGTGCCACTTCTAAGCTTCAAGAAATCCTGCTTGCATATGATCTGCAGATTGATGCCAATGGATATATCTAATGTTGGAGAAACAAGATGATCGCAGCATTTTGCATGTGGTAAGCTTCTCTTATACATATGCATTCTTTCTCCTATCCAATAAGTCATTAACTTAATCATAAGCACTAGCAGAATCTTCATTTCAGTTGAAGCCATACAGTTTCTAATTTATGTAGCTTTATGGTACTCATTTTCCAGGCCAGTCCCCTAAATCATATTATTCAAATATTTTGAATCAAGGATTTCTCGAGCATATCGAATGCTCCCGGTCCGAGTTTCTTGGGAAATTGGGGCGGAGAAGCAGCCCAAGGAGGCTGAATTTGGCAAGGTTTTCCGAGATTGAACCAGGTAACCTTGAAGAGTGTCTATGATACTACTTTGAGCTTACATGCTATAACTCATAAGCGAAATATCTAGTTTCAATGTGGCATGTTCCTTACCAGGTGTTGAAATTTTTTCTTATGGATGAGCTTAGAGTGTGCCAAGATGCAAGGAAGTCATGCCTACTCCATCTTTTGAATCGGAAATTCAGGTAAGCTTTCGACTCCGTTTATCTGTAATTCCTATACAACTTTCGTACTTTAGGCTCTGCCTGATAACCATTTAGTTTTTTTATTTTTGAGAAGTAAGCTTATAAACACTAATTCTACCCCTTTTTTTACGAGTGTTGTCAAAATTAAAGTCGCGTTTTGAAAACAAAAAGGATTAGTTTTTCTAAAACTTATTTTGTTTTTAGAATTTGGTTAATGATTAAGAAATTGTGAGAAAATAAGCACAATTTTTTTGGGAATTTAGTTCACATTATTTTGCATAAACAAACAATGATTTAACGTGTTGGACACGGGCAATCCTACCGACGAGGGCAGACGAAAATGACCATTGTGCCCCTCTTACCATGTAAAGTCTAGATGCTGGTTCTGGGTTTGATTTGGTAATGTTTCTTTCAATCCACACACATTGCGTTTCTTATGTTTTGTTTTTGTAATTAAAGAAATGAAAGTGTTCACTTGACCACAGAATATAATGTATGTATCTTCCTATGTTTGTTCTGTTCTCAGGAGGATCAGCATCGAGGGTTTCAAATTAAAAGTTCATTCTATTTCTAACCATCATCGTGATGAGTTGACCTACTGATGAACGAGAGTTATGCAAATAAATAATAAATGGCTTAGAGAGAATAGGTTCAAGTCATGACAATCGGATCATGGCCTTACCACTCGGTCCCCGATGGGCAGAGGGTTAAAAGTTATTCCAACCCAAGTTTATGGTAGGTTGTCGAATTCTTACACCAAGAATAGTTCAAGGAGAGCTGTCGAGTTGCATTATCTTTATCGTCTTATATGGTGAGATGATTTGCACAACTTACGTTTCTTTCTTTCTTTATAGGTTGAAATCAGTATTTGGGCTAGTTTACGTGAGTTATCTCTTAAAACAATGACGTGACCTTCCAATATTGTGAGCTTGTGAAATTTGAAGTATATTCAATATCATAATCGCTTCT

mRNA sequence

TGCCTTTGGTGGTCTAAAAGATTGCCGTCTGCTTGGCCTGGTTGCCGCCTCAACCCATCCCCATTCCATCCCCAGCGGAAACTTGGTTCTTCACTTCCAAAATTTTTATCTGCGAATTTTTCTCTGAAATTAGGGTTTCAGTTTGTTAAATCCCTAATCATATCGTCTATGCTCGTGTTAATGATTCCGAAAATCACTTCCATGTTCCTTTCGAAGTACCGCTGCAACTACTGCAAGTTGAATTTCTGTTATCGGAGCTGAGTTCGGGAGGGATTTTCTTCCGCTTTTCTGCATTTTTCTCGATCAATCGGGCCCGTCATTGAGCCTTCAGTATTTCATCGTTCTTCTGAGGCCTCTGCCATTTTGGCGCCTTCAACTTTTGAGTGCCTTGGCTGCTTCATCTCGTCATCTCCGCATGGTTCAGAGTGCATTTTCAATAATAAATTTCTGCTCCAAGCTCAACTTTGGAAGAAAAAGACCATGCAGATATTTTGCAACTGCCAATTCTGCGTTGTCTTCTTTCAACTATGCGGACGAGGACTGCTTTACTTCTGAACTTCCTGCTGCTACTAACTCTGATGTTGACTCTGACGAACAAAATTATTTTGGCAATGACGTTCAAGTTTCGAAACGCCTGAAAGCTGATGATCATGAAATGAAACTGATAAAATTGATACTTGGGAACCATGGGTTTAATCTTGGTTCGCATCCAAAACAATTGGAGATCGTAAGGATTTTGGATATTCTATTTGAGGAGAGTTCAGATGCACGACTTTGTCTTTACTACTTCAAATGGTCAGGATGTTTATCTGGATCTAATCGGTCGCTGGAGTCAATCTGTAGGATGATGCATATTTTGGTTGCTGGGAATATGAATCATAGGGCAGTTGATTTAATGTCACATCTTGTTAAAAATTATGGTAGTAAAGAGGGCTTTTCAACTATATTGCTGAAACTTTTCTATGAAACACACCATGAAAGGAAGACTTTAGAAACCACATGTAGCATGCTGGTTGACTGTTACATCAAGGAAAGAATGGTAACGGCTGCTCTTATATTGATGGGTCAAATGAAGAGCTTCGACATATTTCCTTCTATATGGGTATACAAGGCGGTGATACAAGCTTTATTACAAACGAATCAGTCGGAGTCAGCCTGGGATCTTCTAGAAGAAATGCATAGGCAAGGTATAAGTTTAAATTATTCGATTAATCTATTTATTTATCATTATTGTGCAAAAGGTAATCTGAGCAGGGGGTGGAAAGTGCTTTTGGAGTTGAGGAAATTCGGATCGAAGCCTGATGCAGTTGATTACACAATTGTGATCAACTCACTATGCAAAATCTCTCTTTTAAAAGAAGCCACTGCCTTGTTGTTTAAAATGACTGCTTTTGGTGTTTCCCCTGATTCCGTTACGATGAGTTCTGTTATCGATGGTTATTGTAAACTAGGAAAGTTGGATATAGCTTGTAAAATATTGAAGTATTTTAGGCGTCCCTTAAATATTTTTATATACAATAGCTTTATAACGAAGTTATGTAGGGAAGGAAACACGGTAAAAGCTTCTGAAGTTTTTCTTGAAATGTCTGAGGTGGGCTTAGTTCCTGACTGTGTTAGTTACACAACCATGATAGGAGGCTATTGTAAAGTGGGAAACGTAAACAGAGCATTTTCTTTCCTGGGGAAGATGTTAAAAAGTGGAATACGACCTTCCGTTATCACGTATACTTTGTTCATTGATTACTTTTGCAAGTGTCGAGATGTGGAAATGGCTGAAGTTATGCTCCAAAAGATGATTATTGAGGGTTTAAAACCCGATGTTGTCACGTATAATATTTTGATGGATGGATATGGAAAGAAGGGCTACTTGCATAAGGCTTTTGAACTTCTCGATACGATGAGATCTACAAATCTTACGCCTGATGTTGTGACGTATAACACTCTCATTAATGGTCTCGTTACGCGAGGGTTTCTTCAAGAGGCAAAGGATATGTTAGATGAGCTCAACAGGAGGGGTTTCAATATAGATGTTGTCACATACACTAATATCATACATGGATATTCGAAAAGGGGAAACTTTGAGGAAGCTTTTCTTGTTTGGTTTCATATGACTGACAACTGTGTAAAGCCTGATGTTGTTACTTGCAGTGCTCTTCTTAGTGGGTATTGTCGAGAACGGCGTATAGACGAAGCAAATGCTCTATTTTGTAAAATGCTGGACATTGGGTTAAATCCAGACTTGATATTGTACAATACTCTAATTCATGGATTTTGCAGTGTTGGTAATGTGGATGAAGGTTGCAATTTGGTAAAGAAGATGATCGAAAACAGTATCCTTCCGAACAATGTTACTCATCGTGCACTTGTCCTCGGATTTCAGAAAAGGAAGGTTATCGATCCAATAGAGAGTGCCACTTCTAAGCTTCAAGAAATCCTGCTTGCATATGATCTGCAGATTGATGCCAATGGATATATCTAATGTTGGAGAAACAAGATGATCGCAGCATTTTGCATGTGGCCAGTCCCCTAAATCATATTATTCAAATATTTTGAATCAAGGATTTCTCGAGCATATCGAATGCTCCCGGTCCGAGTTTCTTGGGAAATTGGGGCGGAGAAGCAGCCCAAGGAGGCTGAATTTGGCAAGGTTTTCCGAGATTGAACCAGAGTGTGCCAAGATGCAAGGAAGTCATGCCTACTCCATCTTTTGAATCGGAAATTCAGGAGGATCAGCATCGAGGGTTTCAAATTAAAAGTTCATTCTATTTCTAACCATCATCGTGATGAGTTGACCTACTGATGAACGAGAGTTATGCAAATAAATAATAAATGGCTTAGAGAGAATAGGTTCAAGTCATGACAATCGGATCATGGCCTTACCACTCGGTCCCCGATGGGCAGAGGGTTAAAAGTTATTCCAACCCAAGTTTATGGTAGGTTGTCGAATTCTTACACCAAGAATAGTTCAAGGAGAGCTGTCGAGTTGCATTATCTTTATCGTCTTATATGGTGAGATGATTTGCACAACTTACGTTTCTTTCTTTCTTTATAGGTTGAAATCAGTATTTGGGCTAGTTTACGTGAGTTATCTCTTAAAACAATGACGTGACCTTCCAATATTGTGAGCTTGTGAAATTTGAAGTATATTCAATATCATAATCGCTTCT

Coding sequence (CDS)

ATGGTTCAGAGTGCATTTTCAATAATAAATTTCTGCTCCAAGCTCAACTTTGGAAGAAAAAGACCATGCAGATATTTTGCAACTGCCAATTCTGCGTTGTCTTCTTTCAACTATGCGGACGAGGACTGCTTTACTTCTGAACTTCCTGCTGCTACTAACTCTGATGTTGACTCTGACGAACAAAATTATTTTGGCAATGACGTTCAAGTTTCGAAACGCCTGAAAGCTGATGATCATGAAATGAAACTGATAAAATTGATACTTGGGAACCATGGGTTTAATCTTGGTTCGCATCCAAAACAATTGGAGATCGTAAGGATTTTGGATATTCTATTTGAGGAGAGTTCAGATGCACGACTTTGTCTTTACTACTTCAAATGGTCAGGATGTTTATCTGGATCTAATCGGTCGCTGGAGTCAATCTGTAGGATGATGCATATTTTGGTTGCTGGGAATATGAATCATAGGGCAGTTGATTTAATGTCACATCTTGTTAAAAATTATGGTAGTAAAGAGGGCTTTTCAACTATATTGCTGAAACTTTTCTATGAAACACACCATGAAAGGAAGACTTTAGAAACCACATGTAGCATGCTGGTTGACTGTTACATCAAGGAAAGAATGGTAACGGCTGCTCTTATATTGATGGGTCAAATGAAGAGCTTCGACATATTTCCTTCTATATGGGTATACAAGGCGGTGATACAAGCTTTATTACAAACGAATCAGTCGGAGTCAGCCTGGGATCTTCTAGAAGAAATGCATAGGCAAGGTATAAGTTTAAATTATTCGATTAATCTATTTATTTATCATTATTGTGCAAAAGGTAATCTGAGCAGGGGGTGGAAAGTGCTTTTGGAGTTGAGGAAATTCGGATCGAAGCCTGATGCAGTTGATTACACAATTGTGATCAACTCACTATGCAAAATCTCTCTTTTAAAAGAAGCCACTGCCTTGTTGTTTAAAATGACTGCTTTTGGTGTTTCCCCTGATTCCGTTACGATGAGTTCTGTTATCGATGGTTATTGTAAACTAGGAAAGTTGGATATAGCTTGTAAAATATTGAAGTATTTTAGGCGTCCCTTAAATATTTTTATATACAATAGCTTTATAACGAAGTTATGTAGGGAAGGAAACACGGTAAAAGCTTCTGAAGTTTTTCTTGAAATGTCTGAGGTGGGCTTAGTTCCTGACTGTGTTAGTTACACAACCATGATAGGAGGCTATTGTAAAGTGGGAAACGTAAACAGAGCATTTTCTTTCCTGGGGAAGATGTTAAAAAGTGGAATACGACCTTCCGTTATCACGTATACTTTGTTCATTGATTACTTTTGCAAGTGTCGAGATGTGGAAATGGCTGAAGTTATGCTCCAAAAGATGATTATTGAGGGTTTAAAACCCGATGTTGTCACGTATAATATTTTGATGGATGGATATGGAAAGAAGGGCTACTTGCATAAGGCTTTTGAACTTCTCGATACGATGAGATCTACAAATCTTACGCCTGATGTTGTGACGTATAACACTCTCATTAATGGTCTCGTTACGCGAGGGTTTCTTCAAGAGGCAAAGGATATGTTAGATGAGCTCAACAGGAGGGGTTTCAATATAGATGTTGTCACATACACTAATATCATACATGGATATTCGAAAAGGGGAAACTTTGAGGAAGCTTTTCTTGTTTGGTTTCATATGACTGACAACTGTGTAAAGCCTGATGTTGTTACTTGCAGTGCTCTTCTTAGTGGGTATTGTCGAGAACGGCGTATAGACGAAGCAAATGCTCTATTTTGTAAAATGCTGGACATTGGGTTAAATCCAGACTTGATATTGTACAATACTCTAATTCATGGATTTTGCAGTGTTGGTAATGTGGATGAAGGTTGCAATTTGGTAAAGAAGATGATCGAAAACAGTATCCTTCCGAACAATGTTACTCATCGTGCACTTGTCCTCGGATTTCAGAAAAGGAAGGTTATCGATCCAATAGAGAGTGCCACTTCTAAGCTTCAAGAAATCCTGCTTGCATATGATCTGCAGATTGATGCCAATGGATATATCTAA

Protein sequence

MVQSAFSIINFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQNYFGNDVQVSKRLKADDHEMKLIKLILGNHGFNLGSHPKQLEIVRILDILFEESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLNYSINLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQEILLAYDLQIDANGYI
Homology
[Close]
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2)

HSP 1 Score: 570.1 bits (1468), Expect = 3.3e-161
Identity = 289/674 (42.88%), Postives = 444/674 (65.88%), Query Frame = 1 

Query: 10  NFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQNYFGNDVQ 69
           +FC++    R   CR F+ A+ + ++  +  +   +S LP + +    S  +++  + V 
Sbjct: 15  HFCTRTKAFRYFWCRTFSLASLSENNSRFQTD---SSRLPYSGSRYYHSSSKHFGEDFVS 74

Query: 70  VSKRLKADDHEMKLIKLILGNHGF------NLGSHPKQLEIVRILDILFEESSDARLCLY 129
           + K +      ++ I+ +L  H +         +   Q  ++RILD LFEE+ DA + LY
Sbjct: 75  ILKNIDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLY 134

Query: 130 YFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKLFY 189
           +F+WS    G   S  SI RM+HILV+GNMN+RAVD++  LVK    +E    +++K  +
Sbjct: 135 FFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLF 194

Query: 190 ETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQTNQ 249
           ET  +R+ LET  S+L+DC I+ER V  AL L  ++  F IFPS  V  ++++ +L+ + 
Sbjct: 195 ETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG 254

Query: 250 SESAWDLLEEMHRQGISLNYSI-NLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTI 309
            E A + +E M  +G  LN ++ +LFI  YC+ G   +GW++L+ ++ +G +PD V +T+
Sbjct: 255 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 314

Query: 310 VINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRPL 369
            I+ LCK   LKEAT++LFK+  FG+S DSV++SSVIDG+CK+GK + A K++  FR   
Sbjct: 315 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP 374

Query: 370 NIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFL 429
           NIF+Y+SF++ +C  G+ ++AS +F E+ E+GL+PDCV YTTMI GYC +G  ++AF + 
Sbjct: 375 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 434

Query: 430 GKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKK 489
           G +LKSG  PS+ T T+ I    +   +  AE + + M  EGLK DVVTYN LM GYGK 
Sbjct: 435 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 494

Query: 490 GYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTY 549
             L+K FEL+D MRS  ++PDV TYN LI+ +V RG++ EA +++ EL RRGF    + +
Sbjct: 495 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 554

Query: 550 TNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLD 609
           T++I G+SKRG+F+EAF++WF+M D  +KPDVVTCSALL GYC+ +R+++A  LF K+LD
Sbjct: 555 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 614

Query: 610 IGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDP 669
            GL PD++LYNTLIHG+CSVG++++ C L+  M++  +LPN  TH ALVLG + ++ ++ 
Sbjct: 615 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 674

Query: 670 IESATSKLQEILLA 677
              A+  L+EI++A
Sbjct: 675 ETHASMLLEEIIVA 685

[Close]
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.8e-72
Identity = 156/474 (32.91%), Postives = 257/474 (54.22%), Query Frame = 1 

Query: 211 AALILMGQMKSFDI-FPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQG-----ISLNYS 270
           A+L+     +++D+ + +  V+  V+++  + +  + A  ++      G     +S N  
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175

Query: 271 INLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMT 330
           ++  I    +K N+S    V  E+ +    P+   Y I+I   C    +  A  L  KM 
Sbjct: 176 LDATIR---SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 235

Query: 331 AFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRP---LNIFIYNSFITKLCREGNTV 390
             G  P+ VT +++IDGYCKL K+D   K+L+         N+  YN  I  LCREG   
Sbjct: 236 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 295

Query: 391 KASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFI 450
           + S V  EM+  G   D V+Y T+I GYCK GN ++A     +ML+ G+ PSVITYT  I
Sbjct: 296 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 355

Query: 451 DYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLT 510
              CK  ++  A   L +M + GL P+  TY  L+DG+ +KGY+++A+ +L  M     +
Sbjct: 356 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 415

Query: 511 PDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLV 570
           P VVTYN LING    G +++A  +L+++  +G + DVV+Y+ ++ G+ +  + +EA  V
Sbjct: 416 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 475

Query: 571 WFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCS 630
              M +  +KPD +T S+L+ G+C +RR  EA  L+ +ML +GL PD   Y  LI+ +C 
Sbjct: 476 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 535

Query: 631 VGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQEILL 676
            G++++   L  +M+E  +LP+ VT+  L+ G  K       +S T + + +LL
Sbjct: 536 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK-------QSRTREAKRLLL 579

[Close]
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.8e-67
Identity = 147/429 (34.27%), Postives = 231/429 (53.85%), Query Frame = 1 

Query: 230 VYKAVIQALLQTNQSESAWDLLEEMHRQGISLNY-SINLFIYHY---CAKGNLSRGWKVL 289
           V+    Q L+       A  + E+M   G+ L+  S N+++      C K   +    V 
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TATAIIVF 236

Query: 290 LELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKL 349
            E  + G   +   Y IVI+ +C++  +KEA  LL  M   G +PD ++ S+V++GYC+ 
Sbjct: 237 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 296

Query: 350 GKLDIACKILKYFRRP---LNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSY 409
           G+LD   K+++  +R     N +IY S I  LCR     +A E F EM   G++PD V Y
Sbjct: 297 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 356

Query: 410 TTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMII 469
           TT+I G+CK G++  A  F  +M    I P V+TYT  I  FC+  D+  A  +  +M  
Sbjct: 357 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 416

Query: 470 EGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQE 529
           +GL+PD VT+  L++GY K G++  AF + + M     +P+VVTY TLI+GL   G L  
Sbjct: 417 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 476

Query: 530 AKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLS 589
           A ++L E+ + G   ++ TY +I++G  K GN EEA  +        +  D VT + L+ 
Sbjct: 477 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 536

Query: 590 GYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILP 649
            YC+   +D+A  +  +ML  GL P ++ +N L++GFC  G +++G  L+  M+   I P
Sbjct: 537 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 596

Query: 650 NNVTHRALV 652
           N  T  +LV
Sbjct: 597 NATTFNSLV 603

[Close]
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-63
Identity = 146/585 (24.96%), Postives = 295/585 (50.43%), Query Frame = 1 

Query: 94  NLGSHPKQLEIVRILDILFEESSDARLCLYYFKWSGC-LSGSNRSLESICRMMHILVAGN 153
           N+ +H  +L  + ++++L+   +D  L   +    G        +  S+  M+HILV   
Sbjct: 68  NVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSG 127

Query: 154 MNHRAVDLMSHLVKNYGSKEGFSTI-LLKLFYETHHERKTLETTCSMLVDCYIKERMVTA 213
               A   +  +++    + G S + ++     T     + ++   +L+  Y++ R +  
Sbjct: 128 RLSDAQSCLLRMIR----RSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 187

Query: 214 ALILMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLN-YSINLFIY 273
           A      ++S     SI    A+I +L++    E AW + +E+ R G+ +N Y++N+ + 
Sbjct: 188 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 247

Query: 274 HYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSP 333
             C  G + +    L ++++ G  PD V Y  +I++     L++EA  L+  M   G SP
Sbjct: 248 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 307

Query: 334 DSVTMSSVIDGYCKLGKLDIACKILKYFRR---PLNIFIYNSFITKLCREGNTVKASEVF 393
              T ++VI+G CK GK + A ++     R     +   Y S + + C++G+ V+  +VF
Sbjct: 308 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 367

Query: 394 LEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKC 453
            +M    +VPD V +++M+  + + GN+++A  +   + ++G+ P  + YT+ I  +C+ 
Sbjct: 368 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 427

Query: 454 RDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTY 513
             + +A  +  +M+ +G   DVVTYN ++ G  K+  L +A +L + M    L PD  T 
Sbjct: 428 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 487

Query: 514 NTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTD 573
             LI+G    G LQ A ++  ++  +   +DVVTY  ++ G+ K G+ + A  +W  M  
Sbjct: 488 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 547

Query: 574 NCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDE 633
             + P  ++ S L++  C +  + EA  ++ +M+   + P +++ N++I G+C  GN  +
Sbjct: 548 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 607

Query: 634 GCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQE 673
           G + ++KMI    +P+ +++  L+ GF + + +        K++E
Sbjct: 608 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648

[Close]
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-62
Identity = 170/692 (24.57%), Postives = 330/692 (47.69%), Query Frame = 1 

Query: 11  FCSKLNF---GRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQNYFGND 70
           FCS  NF    R+ P R+ + ++S+LS        CF    P+ + S   S    +F + 
Sbjct: 2   FCSLRNFLHVNRRFP-RHVSPSSSSLSQIQ--SPLCFPLSSPSPSQSSFISCPFVWFTSF 61

Query: 71  VQVSK---------RLKADDHEMKLIKLILGNHGFNLGSHPKQLEI----VRILDILFEE 130
           + + +            ++D +   I+ ++ N  ++     K  ++    + +  +L E 
Sbjct: 62  LCIIRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVEL 121

Query: 131 SSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGF 190
             D +L   +FKWS   +G   S+ES C + HIL    M + A  ++  +V +    + F
Sbjct: 122 KEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF 181

Query: 191 STILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAV 250
             +     + T +           L    I   M+  A+    +MK F +FP       +
Sbjct: 182 DVL-----WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL 241

Query: 251 IQALLQTNQSESAWDLLEEMHRQGISLN-YSINLFIYHYCAKGNLSRGWKVLLELRKFGS 310
           +    +  +++      ++M   G     ++ N+ I   C +G++     +  E++  G 
Sbjct: 242 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 301

Query: 311 KPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACK 370
            PD V Y  +I+   K+  L +      +M      PD +T +++I+ +CK GKL I  +
Sbjct: 302 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 361

Query: 371 ILKYFR----RPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGY 430
             +  +    +P N+  Y++ +   C+EG   +A + +++M  VGLVP+  +YT++I   
Sbjct: 362 FYREMKGNGLKP-NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 421

Query: 431 CKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDV 490
           CK+GN++ AF    +ML+ G+  +V+TYT  ID  C    ++ AE +  KM   G+ P++
Sbjct: 422 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 481

Query: 491 VTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDE 550
            +YN L+ G+ K   + +A ELL+ ++   + PD++ Y T I GL +   ++ AK +++E
Sbjct: 482 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 541

Query: 551 LNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERR 610
           +   G   + + YT ++  Y K GN  E   +   M +  ++  VVT   L+ G C+ + 
Sbjct: 542 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 601

Query: 611 IDEANALFCKML-DIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHR 670
           + +A   F ++  D GL  +  ++  +I G C    V+    L ++M++  ++P+   + 
Sbjct: 602 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 661

Query: 671 ALVLG-FQKRKVIDPIESATSKLQEILLAYDL 680
           +L+ G F++  V++ + +   K+ EI +  DL
Sbjct: 662 SLMDGNFKQGNVLEAL-ALRDKMAEIGMKLDL 683

[Close]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match: A0A0A0KV38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G581700 PE=4 SV=1)

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 563/686 (82.07%), Postives = 626/686 (91.25%), Query Frame = 1 

Query: 2   VQSAFSIINFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQ 61
           ++SAFSII+FCSKLNF RK PCRY ATANS LSSFN+ DEDC        TN DV+SDE+
Sbjct: 1   MRSAFSIISFCSKLNFRRKTPCRYSATANSELSSFNHMDEDC--------TNYDVNSDER 60

Query: 62  NYFGNDVQVSKRLKADDHEMKLIKLILGNHGFNLGSHPKQLEIVRILDILFEESSDARLC 121
           +Y GN+V+VSK  K D+ EM+ IKLILGN GFNLGS PKQLEI+RILD+LFE+SSDA LC
Sbjct: 61  SYVGNEVEVSKGQKTDEDEMETIKLILGNRGFNLGSCPKQLEIIRILDVLFEDSSDAGLC 120

Query: 122 LYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKL 181
           LYYFKWSGCLSGSN+SLESICRM HILVAGNMNHRAVDL+SHLVKNYG  EG S+ILLK+
Sbjct: 121 LYYFKWSGCLSGSNQSLESICRMAHILVAGNMNHRAVDLISHLVKNYGCTEGSSSILLKV 180

Query: 182 FYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQT 241
           F ETH+ RKTLETTCSM+V+CYIKERMVT+ALIL+ QMK  +IFPSIWVYK+VI+ALLQT
Sbjct: 181 FCETHNGRKTLETTCSMMVNCYIKERMVTSALILIDQMKHLNIFPSIWVYKSVIKALLQT 240

Query: 242 NQSESAWDLLEEMHRQGISLNYSINLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYT 301
           NQS  AWDLLEEMHRQG+SLNYSINLFI+HYC++GNL +GWKVLLELR FGSKPD VDYT
Sbjct: 241 NQSGMAWDLLEEMHRQGVSLNYSINLFIHHYCSEGNLGKGWKVLLELRNFGSKPDVVDYT 300

Query: 302 IVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRP 361
            VINSLCK+SLLKEATALLFKM  FGVSPD VTMSS+IDG+CK+GK DIACKILKYFR P
Sbjct: 301 TVINSLCKVSLLKEATALLFKMITFGVSPDLVTMSSIIDGHCKVGKSDIACKILKYFRLP 360

Query: 362 LNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSF 421
           LNIFIYNSFITKL  EG+ VKAS+VFLEM+EVGLVPDC+SYTTMIGGYCKVGN+N AFS+
Sbjct: 361 LNIFIYNSFITKLSTEGDMVKASKVFLEMTEVGLVPDCISYTTMIGGYCKVGNINIAFSY 420

Query: 422 LGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGK 481
           L KMLKSGI+PSVITYTLF+DYFC+CRDVEMAEVM +KMI+EGLKPDVV YNILMD YGK
Sbjct: 421 LSKMLKSGIQPSVITYTLFLDYFCECRDVEMAEVMFEKMIVEGLKPDVVVYNILMDAYGK 480

Query: 482 KGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVT 541
           KGY+HKAF+LLD MRSTN+TPDVVTYNTLINGLV RGFLQEAKD+LDEL RRGF++DVVT
Sbjct: 481 KGYMHKAFKLLDMMRSTNVTPDVVTYNTLINGLVMRGFLQEAKDILDELIRRGFSVDVVT 540

Query: 542 YTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKML 601
           YTNIIHGYS RGNFEEAFL+W+HM +NCV PDVVTCSALLSGYCRE+R+DEANALFCKML
Sbjct: 541 YTNIIHGYSTRGNFEEAFLLWYHMAENCVTPDVVTCSALLSGYCREKRMDEANALFCKML 600

Query: 602 DIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVID 661
           DIGL PDLILYNTLIHGFCSVGNVDEGCNLVKKMIE+SI+PNNVTHRALVLGFQK++V D
Sbjct: 601 DIGLKPDLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHRALVLGFQKKRVTD 660

Query: 662 PIESATSKLQEILLAYDLQIDANGYI 688
           PI+SATSKLQEIL+AYDLQIDA GYI
Sbjct: 661 PIQSATSKLQEILIAYDLQIDAIGYI 678

[Close]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match: A0A061FRZ6_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_044567 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 7.6e-205
Identity = 359/636 (56.45%), Postives = 465/636 (73.11%), Query Frame = 1 

Query: 66  NDVQVSKRLKADDH----------EMKLIKLILGNHGFNLGSHP------KQLEIVRILD 125
           N V VS  L    H           + LIK IL   G+N+           +  ++ IL 
Sbjct: 26  NSVSVSSSLLESQHVITQHSQVCNPLSLIKSILWKRGWNINPDNLCPIDFNESSVIGILT 85

Query: 126 ILFEESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYG 185
            LFEES DA L LY+FK S    GS  S++S+C+M+HILV+GNMNHRAVD +  LV+   
Sbjct: 86  HLFEESLDAELALYFFKLSERCVGSLHSVKSVCKMIHILVSGNMNHRAVDFILRLVRISC 145

Query: 186 SKEGFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIW 245
           SK+    +LLKLFYETH +R  LET CSMLVDCYIKE  V  AL L  +MKSF++ PSI 
Sbjct: 146 SKDVSEDLLLKLFYETHSDRMVLETVCSMLVDCYIKENEVGLALELACKMKSFNMIPSIG 205

Query: 246 VYKAVIQALLQTNQSESAWDLLEEMHRQGISLNYSI-NLFIYHYCAKGNLSRGWKVLLEL 305
           V  ++++ALL+ N+ + AWD L++M RQG  LN +I +LFI  YC KG L   W  L+E+
Sbjct: 206 VCNSLLKALLELNELDLAWDFLDQMLRQGSGLNVAIVSLFIDKYCRKGQLLSAWTFLMEM 265

Query: 306 RKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKL 365
           + +G KPD V YTI+I+SLCK+S L EAT+LLFK+T  G+SPDSV +SSV++G+CK GK 
Sbjct: 266 KNYGIKPDVVAYTIIIDSLCKVSCLGEATSLLFKITRLGISPDSVLVSSVVEGHCKAGKP 325

Query: 366 DIACKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGG 425
             A  ++ +F    NIF+YNSFI+KLC +G+ V+AS +F +M E+GL+PDCVSYTT+IGG
Sbjct: 326 KEAINVINFFNLKPNIFVYNSFISKLCADGDMVEASLIFQDMFELGLLPDCVSYTTIIGG 385

Query: 426 YCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPD 485
           YCK  ++NRAF + GKMLK GI+PSV TYT+ ID  CK  D+EMAE + QKMI+ GL PD
Sbjct: 386 YCKDQDMNRAFQYFGKMLKCGIKPSVTTYTVLIDACCKSEDLEMAECLFQKMIMAGLVPD 445

Query: 486 VVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLD 545
           +VT+N ++DGYGKKG+LHKAF LLD MRS  ++PDV TYN +I+ L+ RGF  EAK +LD
Sbjct: 446 IVTFNTVIDGYGKKGHLHKAFMLLDMMRSAGISPDVTTYNIIIHSLIERGFTNEAKVILD 505

Query: 546 ELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRER 605
           EL +RG + D+VT+TNII G SK+G+FEEAFL+WF+M++  VKPDVVTCSALL+GYCR R
Sbjct: 506 ELVQRGISPDMVTFTNIIDGLSKKGDFEEAFLIWFYMSERHVKPDVVTCSALLNGYCRAR 565

Query: 606 RIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHR 665
           R++EAN LF +MLD+GLNPDL+LYNTLIHGFC  GN+DE CNLV  M+ N ILPNNVTH+
Sbjct: 566 RMEEANTLFLRMLDVGLNPDLVLYNTLIHGFCRTGNMDEACNLVTMMVRNGILPNNVTHQ 625

Query: 666 ALVLGFQKRKVIDPIESATSKLQEILLAYDLQIDAN 685
           A VLGF+K+ V +P ESA  KLQ++LL +D+ +D +
Sbjct: 626 AFVLGFEKKWVKNPEESAALKLQQLLLRHDIHVDVD 661

[Close]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match: W9R9T4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012212 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 1.3e-204
Identity = 369/711 (51.90%), Postives = 502/711 (70.60%), Query Frame = 1 

Query: 2   VQSAFSIIN-FCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSE---------LPAA 61
           ++S  SIIN + +      +R  RY+++ N AL+S +  ++ C  SE          P A
Sbjct: 1   MKSLSSIINIYATGAKLVVRRAFRYYSSRNFALTSTSQLEDSCLVSEDSDSAKDTKSPKA 60

Query: 62  TNSDVDSDEQNYFGNDV----QVSKR-------LKADDHEMKLIKLILGNHGFNLGSHP- 121
             +  +  E++    D     +V++R        KA   E+  I  +L N G++L S   
Sbjct: 61  NCNSCERRERDELSFDKKDGDEVAERDFLFLTNQKAKVREVGRITRVLKNRGWDLTSPNG 120

Query: 122 -----KQLEIVRILDILFEESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMN 181
                 ++ I+RI+D LFEESSDA L LY+F WS    GS  ++ S+CRM+HIL +GNM 
Sbjct: 121 YRVKLSEVNIIRIMDDLFEESSDAELALYFFTWSESRIGSKHTVRSVCRMIHILASGNMK 180

Query: 182 HRAVDLMSHLVKNYGSKEGFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALI 241
           HRA+DL+ HLV+ Y  +E +S  LL++ YETH ER   E  CSMLV+CYIKE+ + AAL 
Sbjct: 181 HRAMDLILHLVRRYKEEESYS-FLLEVLYETHTERMIFEIVCSMLVNCYIKEKCLNAALK 240

Query: 242 LMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLNYS-INLFIYHYC 301
           L  Q+K  +IFPS  V  A+++ L+ + Q E AWD LE +  +G+ LN S I+LFI++YC
Sbjct: 241 LTCQLKQHNIFPSDRVSNAMLRELIGSKQLELAWDWLEIIQSRGMGLNASTISLFIHYYC 300

Query: 302 AKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSV 361
            +GN   GWK+L  +R +G KPD + YTI+I++LCK+S   EAT+L+FKMT  G+SPD+V
Sbjct: 301 KEGNFESGWKLLCRMRDYGVKPDVISYTIIIDALCKMSCPIEATSLVFKMTQLGISPDAV 360

Query: 362 TMSSVIDGYCKLGKLDIACKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEV 421
            +SS++DGY K+G++D A KILK F  P NI+ YNSFI+KLC + N VKAS +F +M E+
Sbjct: 361 CVSSIVDGYSKVGRIDQALKILKIFNFPQNIYTYNSFISKLCLDCNMVKASSLFHQMIEL 420

Query: 422 GLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMA 481
           GL+PDC SYTT+IGGYCKVG+  RAF +LG+MLK G++PSV TYT+ ID  CKC ++EMA
Sbjct: 421 GLLPDCFSYTTIIGGYCKVGDSQRAFQYLGRMLKVGVKPSVATYTVLIDTCCKCGNMEMA 480

Query: 482 EVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLING 541
           E +  K+I + L PDVV YN LMDGYG+KG+L K FEL D M+S+N+ PDVVTYNTLI+ 
Sbjct: 481 ECLFWKLIADDLMPDVVVYNSLMDGYGEKGHLQKVFELFDMMKSSNVCPDVVTYNTLIHS 540

Query: 542 LVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPD 601
           LV RGF+ EA+D+ DEL  RGF  DVVT+T +I G+SK+GNFEEAFLVWF+M+++ V+PD
Sbjct: 541 LVMRGFVNEAEDVFDELTERGFCPDVVTFTTLIDGFSKKGNFEEAFLVWFYMSEHRVEPD 600

Query: 602 VVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVK 661
           VVTCSA+L+GYCR  R++EA ALF KML+IGL PDL LYN LI+GFCSVGN+D+ C+L+ 
Sbjct: 601 VVTCSAILNGYCRRHRMEEAKALFQKMLNIGLKPDLRLYNNLIYGFCSVGNMDDACDLIS 660

Query: 662 KMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQEILLAYDLQIDAN 685
           +M+E+  LPN +THRALVLGF+K++  +P+ESA  KLQEILL Y + +  N
Sbjct: 661 RMVEHDNLPNKLTHRALVLGFEKKRAKNPVESADFKLQEILLRYGVHVVVN 710

[Close]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match: M5XNQ0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021440mg PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 7.8e-202
Identity = 370/681 (54.33%), Postives = 485/681 (71.22%), Query Frame = 1 

Query: 7   SIINFCS---KLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNS--------- 66
           SIIN  +   KL F R+   RY+++ NSALSS   ++++  T E   A ++         
Sbjct: 6   SIINVYASQLKLIFRRRSTLRYYSSVNSALSSIILSEDETSTLEDTVAADNGIFLSAKSY 65

Query: 67  --DVDSDEQNYFGND---------VQVSKRLKADDHEMKLIKLILGNHGFNLGS------ 126
             D     + Y G D            S   + D+ EMK + LIL   G+NLG       
Sbjct: 66  PTDFRGINELYCGEDGVCEPVDTGFLFSINERPDEDEMKRLMLILAKRGWNLGCQNGYNI 125

Query: 127 HPKQLEIVRILDILFEESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRA 186
           +  QL  + +L+ LFEES DA+L LY+FKWS C SGS  +L++ICRM+HILV+GN+NHRA
Sbjct: 126 YLNQLNTIELLNDLFEESFDAKLVLYFFKWSECCSGSKHTLQTICRMIHILVSGNLNHRA 185

Query: 187 VDLMSHLVKNYGSKEGFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMG 246
           VDL+  LV+N+G +E  ++ LL++  ETH E + LETTCSMLV+ YI+E MV  AL +  
Sbjct: 186 VDLILRLVRNHGDEESCNS-LLEVLDETHSEIRVLETTCSMLVNGYIQEGMVNMALKIAC 245

Query: 247 QMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLNYSI-NLFIYHYCAKG 306
           QMK  +IFPS              + SE AWD LE M  +G+ LN ++ +LFI  YC++G
Sbjct: 246 QMKHLNIFPSNG----------DQSSSELAWDFLEVMRTRGMGLNAAMMSLFINKYCSEG 305

Query: 307 NLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMS 366
           +L  GWK+LLE++ +G +PD V +TIVINSLCK+S L EATALLFKMT  G+SPD V +S
Sbjct: 306 DLESGWKLLLEMKNYGIQPDVVSFTIVINSLCKMSYLNEATALLFKMTQLGISPDPVLLS 365

Query: 367 SVIDGYCKLGKLDIACKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLV 426
           S+IDG+CKLG+ ++A  ILK F  PLNIFIYNSFI+KLC +GN  +AS +F EMS +GL+
Sbjct: 366 SIIDGHCKLGQTEVALSILKIFNTPLNIFIYNSFISKLCTDGNMAEASSLFHEMSMLGLL 425

Query: 427 PDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVM 486
           PDC  Y+T+I GYCKV +++RAF + GKMLK+GI P V TYT  ID + K  ++EMAE  
Sbjct: 426 PDCFCYSTIIDGYCKVRDIDRAFQYFGKMLKNGITPCVTTYTSLIDAYLKSGNMEMAEYS 485

Query: 487 LQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVT 546
             KMI EGL PD+VT+N LMDG+G+KG+L K F LLD M S+N++PD+VTYNTLI+ LVT
Sbjct: 486 FHKMISEGLAPDIVTFNTLMDGFGRKGHLQKVFGLLDMMNSSNVSPDIVTYNTLIHSLVT 545

Query: 547 RGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVT 606
           RGF+ EAK++L EL +RGF++DVVT+TN+I G+SK+GNFEEAF VWF+M+++ VKPDVVT
Sbjct: 546 RGFVIEAKEILFELIKRGFSLDVVTFTNLIDGFSKKGNFEEAFFVWFYMSEHDVKPDVVT 605

Query: 607 CSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMI 658
           CSALL+GYCRERRI+EAN LF KML+IGL PDLILYNTLIHG CS G++D+ C L+  MI
Sbjct: 606 CSALLNGYCRERRIEEANVLFHKMLNIGLRPDLILYNTLIHGHCSFGSMDDACTLISMMI 665

[Close]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match: A0A0B0MK88_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_18322 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 1.7e-201
Identity = 351/613 (57.26%), Postives = 460/613 (75.04%), Query Frame = 1 

Query: 81  MKLIKLILGNHGFNLGSHPKQLE--------IVRILDILFEESSDARLCLYYFKWSGCLS 140
           M +IK IL   GFN+  +P+ L         ++RIL+ LF+ESS++ L L++FK S    
Sbjct: 53  MSMIKSILSKRGFNI--NPENLHAVDLNESNLIRILNDLFDESSNSELALHFFKLSEYCI 112

Query: 141 GSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKLFYETHHERKTL 200
           GS  S +S+C+M+HILV+GNMNH AVD + +LV+    K+     LLKLFYETH ++  L
Sbjct: 113 GSLHSNKSVCKMIHILVSGNMNHIAVDFILYLVRVSVKKDVPEDELLKLFYETHTDKTVL 172

Query: 201 ETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLE 260
            T  SMLVDCYI+E+    A  L  QMK FD+FPS+ V  ++++ALL+ NQ + AWD L+
Sbjct: 173 RTVYSMLVDCYIREKKADLAFELTCQMKHFDMFPSVGVCNSLLKALLRLNQLDLAWDFLD 232

Query: 261 EMHRQGISLNYSI-NLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKIS 320
           +M RQGI LN SI  LFI  YC KG+L   WK+L++++ +G KPD V YTI+IN+LCK+S
Sbjct: 233 QMMRQGIRLNVSIFTLFINMYCNKGHLLSAWKLLMDMKNYGIKPDVVAYTIIINTLCKMS 292

Query: 321 LLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRPLNIFIYNSFI 380
            L EAT++LFK+T FGV PDSV +SSV++GYCK+G+   A  ++K+F    NIF+YNSFI
Sbjct: 293 CLGEATSMLFKITRFGVFPDSVLVSSVVEGYCKVGRPMEAMNVIKFFNLKPNIFVYNSFI 352

Query: 381 TKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIR 440
           TK C EGN VKAS +F EM E+GL+PDCVSYTT+IGGYC+  ++ RAF + GKMLK GI 
Sbjct: 353 TKFCAEGNMVKASLIFQEMFELGLLPDCVSYTTIIGGYCRDRDMGRAFQYFGKMLKCGIN 412

Query: 441 PSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFEL 500
           P+V T+TL ID  CK +D+EMA+ +  KMI+EGL PDVVT+N ++DGYGK G LHKAF L
Sbjct: 413 PTVTTFTLLIDACCKSKDLEMADYLFHKMIMEGLVPDVVTFNTVIDGYGKMGLLHKAFML 472

Query: 501 LDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSK 560
           +D MRS  ++PDV TYN +I+ L+ RGF  EAKD+LDEL RRG + D VT+TNII G SK
Sbjct: 473 VDMMRSAGISPDVTTYNIIIDSLIKRGFTNEAKDILDELVRRGVSPDTVTFTNIIDGLSK 532

Query: 561 RGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLIL 620
           +G+FEEAFLVWF+M++  VKPDV+TCSALL+GYCRERR+ EANALF +MLDIGL+PDL+L
Sbjct: 533 KGDFEEAFLVWFYMSECNVKPDVLTCSALLNGYCRERRMTEANALFVRMLDIGLSPDLVL 592

Query: 621 YNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQ 680
           YNTLIHGFC +G++D+ CNLV+ MI + ILPN  THRA +LGF K+ V +P E+A  KLQ
Sbjct: 593 YNTLIHGFCGIGDMDKACNLVEMMIRDGILPNKGTHRAFILGFGKKWVKNPEETAALKLQ 652

Query: 681 EILLAYDLQIDAN 685
           ++LL YD+ +D N
Sbjct: 653 QLLLQYDIHVDVN 663

[Close]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match: AT2G19280.1 (AT2G19280.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 570.1 bits (1468), Expect = 1.9e-162
Identity = 289/674 (42.88%), Postives = 444/674 (65.88%), Query Frame = 1 

Query: 10  NFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQNYFGNDVQ 69
           +FC++    R   CR F+ A+ + ++  +  +   +S LP + +    S  +++  + V 
Sbjct: 15  HFCTRTKAFRYFWCRTFSLASLSENNSRFQTD---SSRLPYSGSRYYHSSSKHFGEDFVS 74

Query: 70  VSKRLKADDHEMKLIKLILGNHGF------NLGSHPKQLEIVRILDILFEESSDARLCLY 129
           + K +      ++ I+ +L  H +         +   Q  ++RILD LFEE+ DA + LY
Sbjct: 75  ILKNIDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLY 134

Query: 130 YFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKLFY 189
           +F+WS    G   S  SI RM+HILV+GNMN+RAVD++  LVK    +E    +++K  +
Sbjct: 135 FFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLF 194

Query: 190 ETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQTNQ 249
           ET  +R+ LET  S+L+DC I+ER V  AL L  ++  F IFPS  V  ++++ +L+ + 
Sbjct: 195 ETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG 254

Query: 250 SESAWDLLEEMHRQGISLNYSI-NLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTI 309
            E A + +E M  +G  LN ++ +LFI  YC+ G   +GW++L+ ++ +G +PD V +T+
Sbjct: 255 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 314

Query: 310 VINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRPL 369
            I+ LCK   LKEAT++LFK+  FG+S DSV++SSVIDG+CK+GK + A K++  FR   
Sbjct: 315 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP 374

Query: 370 NIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFL 429
           NIF+Y+SF++ +C  G+ ++AS +F E+ E+GL+PDCV YTTMI GYC +G  ++AF + 
Sbjct: 375 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 434

Query: 430 GKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKK 489
           G +LKSG  PS+ T T+ I    +   +  AE + + M  EGLK DVVTYN LM GYGK 
Sbjct: 435 GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKT 494

Query: 490 GYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTY 549
             L+K FEL+D MRS  ++PDV TYN LI+ +V RG++ EA +++ EL RRGF    + +
Sbjct: 495 HQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAF 554

Query: 550 TNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLD 609
           T++I G+SKRG+F+EAF++WF+M D  +KPDVVTCSALL GYC+ +R+++A  LF K+LD
Sbjct: 555 TDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD 614

Query: 610 IGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDP 669
            GL PD++LYNTLIHG+CSVG++++ C L+  M++  +LPN  TH ALVLG + ++ ++ 
Sbjct: 615 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 674

Query: 670 IESATSKLQEILLA 677
              A+  L+EI++A
Sbjct: 675 ETHASMLLEEIIVA 685

[Close]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 274.2 bits (700), Expect = 2.1e-73
Identity = 156/474 (32.91%), Postives = 257/474 (54.22%), Query Frame = 1 

Query: 211 AALILMGQMKSFDI-FPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQG-----ISLNYS 270
           A+L+     +++D+ + +  V+  V+++  + +  + A  ++      G     +S N  
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175

Query: 271 INLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMT 330
           ++  I    +K N+S    V  E+ +    P+   Y I+I   C    +  A  L  KM 
Sbjct: 176 LDATIR---SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 235

Query: 331 AFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRP---LNIFIYNSFITKLCREGNTV 390
             G  P+ VT +++IDGYCKL K+D   K+L+         N+  YN  I  LCREG   
Sbjct: 236 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 295

Query: 391 KASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFI 450
           + S V  EM+  G   D V+Y T+I GYCK GN ++A     +ML+ G+ PSVITYT  I
Sbjct: 296 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 355

Query: 451 DYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLT 510
              CK  ++  A   L +M + GL P+  TY  L+DG+ +KGY+++A+ +L  M     +
Sbjct: 356 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 415

Query: 511 PDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLV 570
           P VVTYN LING    G +++A  +L+++  +G + DVV+Y+ ++ G+ +  + +EA  V
Sbjct: 416 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 475

Query: 571 WFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCS 630
              M +  +KPD +T S+L+ G+C +RR  EA  L+ +ML +GL PD   Y  LI+ +C 
Sbjct: 476 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 535

Query: 631 VGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQEILL 676
            G++++   L  +M+E  +LP+ VT+  L+ G  K       +S T + + +LL
Sbjct: 536 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK-------QSRTREAKRLLL 579

[Close]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-68
Identity = 147/429 (34.27%), Postives = 231/429 (53.85%), Query Frame = 1 

Query: 230 VYKAVIQALLQTNQSESAWDLLEEMHRQGISLNY-SINLFIYHY---CAKGNLSRGWKVL 289
           V+    Q L+       A  + E+M   G+ L+  S N+++      C K   +    V 
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK--TATAIIVF 236

Query: 290 LELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKL 349
            E  + G   +   Y IVI+ +C++  +KEA  LL  M   G +PD ++ S+V++GYC+ 
Sbjct: 237 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 296

Query: 350 GKLDIACKILKYFRRP---LNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSY 409
           G+LD   K+++  +R     N +IY S I  LCR     +A E F EM   G++PD V Y
Sbjct: 297 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 356

Query: 410 TTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMII 469
           TT+I G+CK G++  A  F  +M    I P V+TYT  I  FC+  D+  A  +  +M  
Sbjct: 357 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 416

Query: 470 EGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQE 529
           +GL+PD VT+  L++GY K G++  AF + + M     +P+VVTY TLI+GL   G L  
Sbjct: 417 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 476

Query: 530 AKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLS 589
           A ++L E+ + G   ++ TY +I++G  K GN EEA  +        +  D VT + L+ 
Sbjct: 477 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 536

Query: 590 GYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILP 649
            YC+   +D+A  +  +ML  GL P ++ +N L++GFC  G +++G  L+  M+   I P
Sbjct: 537 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 596

Query: 650 NNVTHRALV 652
           N  T  +LV
Sbjct: 597 NATTFNSLV 603

[Close]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 8.1e-65
Identity = 146/585 (24.96%), Postives = 295/585 (50.43%), Query Frame = 1 

Query: 94  NLGSHPKQLEIVRILDILFEESSDARLCLYYFKWSGC-LSGSNRSLESICRMMHILVAGN 153
           N+ +H  +L  + ++++L+   +D  L   +    G        +  S+  M+HILV   
Sbjct: 68  NVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSG 127

Query: 154 MNHRAVDLMSHLVKNYGSKEGFSTI-LLKLFYETHHERKTLETTCSMLVDCYIKERMVTA 213
               A   +  +++    + G S + ++     T     + ++   +L+  Y++ R +  
Sbjct: 128 RLSDAQSCLLRMIR----RSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 187

Query: 214 ALILMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLN-YSINLFIY 273
           A      ++S     SI    A+I +L++    E AW + +E+ R G+ +N Y++N+ + 
Sbjct: 188 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 247

Query: 274 HYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSP 333
             C  G + +    L ++++ G  PD V Y  +I++     L++EA  L+  M   G SP
Sbjct: 248 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 307

Query: 334 DSVTMSSVIDGYCKLGKLDIACKILKYFRR---PLNIFIYNSFITKLCREGNTVKASEVF 393
              T ++VI+G CK GK + A ++     R     +   Y S + + C++G+ V+  +VF
Sbjct: 308 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 367

Query: 394 LEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKC 453
            +M    +VPD V +++M+  + + GN+++A  +   + ++G+ P  + YT+ I  +C+ 
Sbjct: 368 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 427

Query: 454 RDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTY 513
             + +A  +  +M+ +G   DVVTYN ++ G  K+  L +A +L + M    L PD  T 
Sbjct: 428 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 487

Query: 514 NTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTD 573
             LI+G    G LQ A ++  ++  +   +DVVTY  ++ G+ K G+ + A  +W  M  
Sbjct: 488 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 547

Query: 574 NCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDE 633
             + P  ++ S L++  C +  + EA  ++ +M+   + P +++ N++I G+C  GN  +
Sbjct: 548 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 607

Query: 634 GCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQE 673
           G + ++KMI    +P+ +++  L+ GF + + +        K++E
Sbjct: 608 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648

[Close]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match: AT2G02150.1 (AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-63
Identity = 170/692 (24.57%), Postives = 330/692 (47.69%), Query Frame = 1 

Query: 11  FCSKLNF---GRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQNYFGND 70
           FCS  NF    R+ P R+ + ++S+LS        CF    P+ + S   S    +F + 
Sbjct: 2   FCSLRNFLHVNRRFP-RHVSPSSSSLSQIQ--SPLCFPLSSPSPSQSSFISCPFVWFTSF 61

Query: 71  VQVSK---------RLKADDHEMKLIKLILGNHGFNLGSHPKQLEI----VRILDILFEE 130
           + + +            ++D +   I+ ++ N  ++     K  ++    + +  +L E 
Sbjct: 62  LCIIRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVEL 121

Query: 131 SSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGF 190
             D +L   +FKWS   +G   S+ES C + HIL    M + A  ++  +V +    + F
Sbjct: 122 KEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF 181

Query: 191 STILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAV 250
             +     + T +           L    I   M+  A+    +MK F +FP       +
Sbjct: 182 DVL-----WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGL 241

Query: 251 IQALLQTNQSESAWDLLEEMHRQGISLN-YSINLFIYHYCAKGNLSRGWKVLLELRKFGS 310
           +    +  +++      ++M   G     ++ N+ I   C +G++     +  E++  G 
Sbjct: 242 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 301

Query: 311 KPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACK 370
            PD V Y  +I+   K+  L +      +M      PD +T +++I+ +CK GKL I  +
Sbjct: 302 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 361

Query: 371 ILKYFR----RPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGY 430
             +  +    +P N+  Y++ +   C+EG   +A + +++M  VGLVP+  +YT++I   
Sbjct: 362 FYREMKGNGLKP-NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 421

Query: 431 CKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDV 490
           CK+GN++ AF    +ML+ G+  +V+TYT  ID  C    ++ AE +  KM   G+ P++
Sbjct: 422 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 481

Query: 491 VTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDE 550
            +YN L+ G+ K   + +A ELL+ ++   + PD++ Y T I GL +   ++ AK +++E
Sbjct: 482 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 541

Query: 551 LNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERR 610
           +   G   + + YT ++  Y K GN  E   +   M +  ++  VVT   L+ G C+ + 
Sbjct: 542 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 601

Query: 611 IDEANALFCKML-DIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHR 670
           + +A   F ++  D GL  +  ++  +I G C    V+    L ++M++  ++P+   + 
Sbjct: 602 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 661

Query: 671 ALVLG-FQKRKVIDPIESATSKLQEILLAYDL 680
           +L+ G F++  V++ + +   K+ EI +  DL
Sbjct: 662 SLMDGNFKQGNVLEAL-ALRDKMAEIGMKLDL 683

[Close]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match: gi|778704309|ref|XP_011655513.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Cucumis sativus])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 563/686 (82.07%), Postives = 626/686 (91.25%), Query Frame = 1 

Query: 2   VQSAFSIINFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQ 61
           ++SAFSII+FCSKLNF RK PCRY ATANS LSSFN+ DEDC        TN DV+SDE+
Sbjct: 1   MRSAFSIISFCSKLNFRRKTPCRYSATANSELSSFNHMDEDC--------TNYDVNSDER 60

Query: 62  NYFGNDVQVSKRLKADDHEMKLIKLILGNHGFNLGSHPKQLEIVRILDILFEESSDARLC 121
           +Y GN+V+VSK  K D+ EM+ IKLILGN GFNLGS PKQLEI+RILD+LFE+SSDA LC
Sbjct: 61  SYVGNEVEVSKGQKTDEDEMETIKLILGNRGFNLGSCPKQLEIIRILDVLFEDSSDAGLC 120

Query: 122 LYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKL 181
           LYYFKWSGCLSGSN+SLESICRM HILVAGNMNHRAVDL+SHLVKNYG  EG S+ILLK+
Sbjct: 121 LYYFKWSGCLSGSNQSLESICRMAHILVAGNMNHRAVDLISHLVKNYGCTEGSSSILLKV 180

Query: 182 FYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQT 241
           F ETH+ RKTLETTCSM+V+CYIKERMVT+ALIL+ QMK  +IFPSIWVYK+VI+ALLQT
Sbjct: 181 FCETHNGRKTLETTCSMMVNCYIKERMVTSALILIDQMKHLNIFPSIWVYKSVIKALLQT 240

Query: 242 NQSESAWDLLEEMHRQGISLNYSINLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYT 301
           NQS  AWDLLEEMHRQG+SLNYSINLFI+HYC++GNL +GWKVLLELR FGSKPD VDYT
Sbjct: 241 NQSGMAWDLLEEMHRQGVSLNYSINLFIHHYCSEGNLGKGWKVLLELRNFGSKPDVVDYT 300

Query: 302 IVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRP 361
            VINSLCK+SLLKEATALLFKM  FGVSPD VTMSS+IDG+CK+GK DIACKILKYFR P
Sbjct: 301 TVINSLCKVSLLKEATALLFKMITFGVSPDLVTMSSIIDGHCKVGKSDIACKILKYFRLP 360

Query: 362 LNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSF 421
           LNIFIYNSFITKL  EG+ VKAS+VFLEM+EVGLVPDC+SYTTMIGGYCKVGN+N AFS+
Sbjct: 361 LNIFIYNSFITKLSTEGDMVKASKVFLEMTEVGLVPDCISYTTMIGGYCKVGNINIAFSY 420

Query: 422 LGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGK 481
           L KMLKSGI+PSVITYTLF+DYFC+CRDVEMAEVM +KMI+EGLKPDVV YNILMD YGK
Sbjct: 421 LSKMLKSGIQPSVITYTLFLDYFCECRDVEMAEVMFEKMIVEGLKPDVVVYNILMDAYGK 480

Query: 482 KGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVT 541
           KGY+HKAF+LLD MRSTN+TPDVVTYNTLINGLV RGFLQEAKD+LDEL RRGF++DVVT
Sbjct: 481 KGYMHKAFKLLDMMRSTNVTPDVVTYNTLINGLVMRGFLQEAKDILDELIRRGFSVDVVT 540

Query: 542 YTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKML 601
           YTNIIHGYS RGNFEEAFL+W+HM +NCV PDVVTCSALLSGYCRE+R+DEANALFCKML
Sbjct: 541 YTNIIHGYSTRGNFEEAFLLWYHMAENCVTPDVVTCSALLSGYCREKRMDEANALFCKML 600

Query: 602 DIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVID 661
           DIGL PDLILYNTLIHGFCSVGNVDEGCNLVKKMIE+SI+PNNVTHRALVLGFQK++V D
Sbjct: 601 DIGLKPDLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHRALVLGFQKKRVTD 660

Query: 662 PIESATSKLQEILLAYDLQIDANGYI 688
           PI+SATSKLQEIL+AYDLQIDA GYI
Sbjct: 661 PIQSATSKLQEILIAYDLQIDAIGYI 678

[Close]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match: gi|659090263|ref|XP_008445921.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Cucumis melo])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 548/686 (79.88%), Postives = 621/686 (90.52%), Query Frame = 1 

Query: 2   VQSAFSIINFCSKLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDSDEQ 61
           ++SAFSII+FCSKLNF RK PCRYFATAN  LSSFN+ DEDC        TN DVDSDE+
Sbjct: 1   MKSAFSIISFCSKLNFRRKTPCRYFATANYELSSFNHMDEDC--------TNYDVDSDER 60

Query: 62  NYFGNDVQVSKRLKADDHEMKLIKLILGNHGFNLGSHPKQLEIVRILDILFEESSDARLC 121
           +YFGN+V+VSK  K D+ +M+ IKLILGN GF LGS PKQLE VRILDILFE+SSD  LC
Sbjct: 61  SYFGNEVEVSKGKKTDEDKMEKIKLILGNRGFKLGSRPKQLETVRILDILFEDSSDPELC 120

Query: 122 LYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKL 181
           LYYFKWSGCLSGSN+SLESICRM HILVAGN NH AVDL+SHLVKNYG KEG S+ILL++
Sbjct: 121 LYYFKWSGCLSGSNQSLESICRMAHILVAGNKNHGAVDLISHLVKNYGCKEGSSSILLEV 180

Query: 182 FYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQT 241
           FY+TH++RKTLETTC M+++CYIKE MVT+A+IL+ QM+  ++FPSIWVYK+VI+ALLQT
Sbjct: 181 FYDTHNKRKTLETTCGMMINCYIKEGMVTSAVILIDQMRRLNVFPSIWVYKSVIKALLQT 240

Query: 242 NQSESAWDLLEEMHRQGISLNYSINLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYT 301
           N+ + AWDLLEEM RQGISL+YSINLFI+HYC++GNL +GWKVLLELR FGSKPD VDYT
Sbjct: 241 NRFDMAWDLLEEMQRQGISLHYSINLFIHHYCSEGNLGKGWKVLLELRNFGSKPDVVDYT 300

Query: 302 IVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRP 361
            VINSLCKISLLKEATALLFKM  FGVSPD VTMSS+IDG+CK+GK DIACKILKYF+ P
Sbjct: 301 TVINSLCKISLLKEATALLFKMITFGVSPDLVTMSSIIDGHCKVGKSDIACKILKYFKIP 360

Query: 362 LNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSF 421
           LNIFIYNSFIT+L  EG+TVKAS+VFLEMSEVGLVPDCVSYTTMIGGYCKVGN+N AFS+
Sbjct: 361 LNIFIYNSFITELFMEGDTVKASKVFLEMSEVGLVPDCVSYTTMIGGYCKVGNINIAFSY 420

Query: 422 LGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGK 481
           L KMLKSGI+PSVITYTLF+DYFC+C DVEMAEVM +KMI+E LKPDVV YNILMD YGK
Sbjct: 421 LSKMLKSGIQPSVITYTLFVDYFCECGDVEMAEVMFEKMIVEDLKPDVVMYNILMDAYGK 480

Query: 482 KGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVT 541
           KGY+HKAF+LLD MRSTN+TPDVVTYN+LI+GLV RGFLQEAKD+LDEL RRGF+IDVVT
Sbjct: 481 KGYMHKAFQLLDMMRSTNVTPDVVTYNSLIHGLVMRGFLQEAKDILDELIRRGFSIDVVT 540

Query: 542 YTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKML 601
           YTNI+HGYSKRGNFEEAFL+W+HM DNCV PDVVTCSALLSGYCR + +DEANALFC+ML
Sbjct: 541 YTNIMHGYSKRGNFEEAFLLWYHMADNCVTPDVVTCSALLSGYCRAKHMDEANALFCRML 600

Query: 602 DIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVID 661
           DIGL PDLILYNTLIHGFCSVGNVDEGCNLVKKMIE+SI+PNNVTHRALVLGFQK++V+D
Sbjct: 601 DIGLKPDLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHRALVLGFQKKRVMD 660

Query: 662 PIESATSKLQEILLAYDLQIDANGYI 688
           PI+SATSKLQEIL+AYDLQIDA G+I
Sbjct: 661 PIQSATSKLQEILIAYDLQIDAIGHI 678

[Close]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match: gi|1009118967|ref|XP_015876129.1| (PREDICTED: uncharacterized protein LOC107412823 [Ziziphus jujuba])

HSP 1 Score: 745.3 bits (1923), Expect = 9.2e-212
Identity = 375/706 (53.12%), Postives = 507/706 (71.81%), Query Frame = 1 

Query: 8   IINFCS-KLNFGRKRPCRYFATANSALSSFNYADEDCFTSELPAATNSDVDS-------- 67
           I+N CS +L    +R  RY++   SALSS +  D    + +L +  +  + S        
Sbjct: 7   IVNICSTRLKLALRRTFRYYSFGKSALSSISQKDVCLISEDLVSDDDGMMLSAQSSLARY 66

Query: 68  ---DEQNYFGNDVQ--VSKR------LKADDHEMKLIKLILGNHGFNLGSHP-----KQL 127
              DE ++   DV   V K       LKA+DH+MK I  IL + G+N+ S        ++
Sbjct: 67  NEYDEFSFSRKDVAEVVDKNSLFFNNLKAEDHDMKRIMTILTHRGWNITSFMCRIDLNEI 126

Query: 128 EIVRILDILFEESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMS 187
           +I+RI++ L+EES DA L LY+F W  C SGS  ++ ++CRM+HILV+GN+NHRA+D + 
Sbjct: 127 KIIRIINDLYEESLDATLALYFFNWLECCSGSKHAIRTVCRMIHILVSGNINHRAMDKIL 186

Query: 188 HLVKNYGSKEGFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSF 247
           HLV+NYG  E    +LLK+  ETH ER+ LET CSMLV+CY+ E MV  AL L   M++ 
Sbjct: 187 HLVRNYGEAESCD-LLLKILCETHTERRVLETACSMLVNCYVMENMVNIALKLTCAMENL 246

Query: 248 DIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGISLN-YSINLFIYHYCAKGNLSRG 307
           +IFPS+ V   ++  L+++ Q E AW  LE M  +G+ LN +  +LFI+  C++ N+  G
Sbjct: 247 NIFPSVQVCNKLLNELVRSKQLELAWKFLEIMQSRGMGLNAFIFSLFIHKCCSEYNIESG 306

Query: 308 WKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDG 367
           WK+LLE++ +G +PD V YTI+I+SLCK+S L EAT+LLFKM   G+SPD V +SSVIDG
Sbjct: 307 WKLLLEMKNYGIQPDVVSYTIIIDSLCKLSCLLEATSLLFKMMQLGISPDPVLISSVIDG 366

Query: 368 YCKLGKLDIACKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVS 427
           +CK+G+++ A  ILK F  PLNIF+YNSFI+K C +GN  KAS +F EMS +G +PDC S
Sbjct: 367 HCKVGEMEKAIDILKVFNLPLNIFVYNSFISKSCSDGNMEKASRLFHEMSVLGFLPDCFS 426

Query: 428 YTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMI 487
           YTT++GGYCK G++ +AF + GKM+K G +PSV TYTL ID  CK  ++EMAE +L KM+
Sbjct: 427 YTTIVGGYCKAGDMKKAFQYFGKMIKGGTKPSVTTYTLLIDTCCKSGNMEMAESLLHKMM 486

Query: 488 IEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQ 547
            EGL+PDVV YN LMDGYGKKG+L K FELL  M+S+N+  DVVTYNTLI+ L+ RGF++
Sbjct: 487 TEGLQPDVVAYNTLMDGYGKKGHLQKVFELLGKMKSSNVCLDVVTYNTLIHSLIKRGFIK 546

Query: 548 EAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALL 607
           EA ++LDEL  RGF+ DVVT+TN+I G+SK+GNFEEAFLVW+ M+++ VKPDVVTCSA+L
Sbjct: 547 EAGEILDELIERGFSPDVVTFTNVIDGFSKQGNFEEAFLVWYSMSEHRVKPDVVTCSAIL 606

Query: 608 SGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSIL 667
           +GYCRERR++EA  LF  M+DIGLNPDL LYN LIHGFCSVGN+DE CNLV  M+E+ IL
Sbjct: 607 NGYCRERRMEEARRLFQDMIDIGLNPDLRLYNILIHGFCSVGNMDEACNLVSTMVEHGIL 666

Query: 668 PNNVTHRALVLGFQKRKVIDPIESATSKLQEILLAYDLQIDANGYI 688
           PNN++H+AL+LGF+K+ V +P+E+A  KLQEILL Y +  D + Y+
Sbjct: 667 PNNISHKALILGFEKKWVKNPVENAAFKLQEILLRYGIDFDTDEYL 711

[Close]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match: gi|645251570|ref|XP_008231739.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Prunus mume])

HSP 1 Score: 743.8 bits (1919), Expect = 2.7e-211
Identity = 362/609 (59.44%), Postives = 476/609 (78.16%), Query Frame = 1 

Query: 86  LILGNHGFNLGS------HPKQLEIVRILDILFEESSDARLCLYYFKWSGCLSGSNRSLE 145
           LIL   G+NLG       +  QL I+ +L+ LFEES DA+L LY+FKWS C SGS  +++
Sbjct: 2   LILAKRGWNLGCQNGYNIYLNQLNIIELLNDLFEESLDAKLVLYFFKWSECCSGSKHTIQ 61

Query: 146 SICRMMHILVAGNMNHRAVDLMSHLVKNYGSKEGFSTILLKLFYETHHERKTLETTCSML 205
           +ICRM+HILV+GN+NHRAVDL+ HLV+N+G +E  ++ LL++ YETH E + LETTCSML
Sbjct: 62  TICRMIHILVSGNLNHRAVDLILHLVRNHGDEESCNS-LLEVLYETHSEIRVLETTCSML 121

Query: 206 VDCYIKERMVTAALILMGQMKSFDIFPSIWVYKAVIQALLQTNQSESAWDLLEEMHRQGI 265
           V+ YI+E MV  AL +  QMK  +IFPS  V  +++QALL + Q E AWD LE M  +G+
Sbjct: 122 VNGYIQEGMVNMALKIACQMKHLNIFPSNGVCNSLLQALLGSKQLELAWDFLEVMRTRGM 181

Query: 266 SLNYSI-NLFIYHYCAKGNLSRGWKVLLELRKFGSKPDAVDYTIVINSLCKISLLKEATA 325
            LN ++ +LFI  YC++G+L  GWK+LLE++ +G +PD V +TIVINSLCK+S L EATA
Sbjct: 182 GLNAAMMSLFINKYCSEGDLESGWKLLLEMKNYGIQPDVVSFTIVINSLCKMSYLNEATA 241

Query: 326 LLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIACKILKYFRRPLNIFIYNSFITKLCREG 385
           LLFKMT  G+SPD V +SS+IDG+CKLG+ ++A  ILK F   LNIFIYNSFI+KLC +G
Sbjct: 242 LLFKMTQLGISPDPVLLSSIIDGHCKLGQTEVAISILKIFNTSLNIFIYNSFISKLCTDG 301

Query: 386 NTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCKVGNVNRAFSFLGKMLKSGIRPSVITYT 445
           N V+AS +F EMS +GL+PDC  Y+T+I GYCKV +++RAF + GKMLK+GI P V TYT
Sbjct: 302 NMVEASRLFHEMSLLGLLPDCFCYSTIIDGYCKVRDIDRAFQYFGKMLKNGITPCVTTYT 361

Query: 446 LFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVTYNILMDGYGKKGYLHKAFELLDTMRST 505
             ID +CK  ++E AE    KMI  GL PDVVT+N LMDG+G+KG+L K F LLD M S+
Sbjct: 362 SLIDAYCKSGNMETAEYSFHKMISAGLAPDVVTFNTLMDGFGRKGHLQKVFGLLDMMNSS 421

Query: 506 NLTPDVVTYNTLINGLVTRGFLQEAKDMLDELNRRGFNIDVVTYTNIIHGYSKRGNFEEA 565
           N++PD+VTYNTLI+ LVTRGF+ EAK++L EL +RGF++DVVT+TN+I G+SK+GNFEEA
Sbjct: 422 NVSPDIVTYNTLIHSLVTRGFVIEAKEILFELIKRGFSLDVVTFTNLIDGFSKKGNFEEA 481

Query: 566 FLVWFHMTDNCVKPDVVTCSALLSGYCRERRIDEANALFCKMLDIGLNPDLILYNTLIHG 625
           F VWF+M+++ VKPDVVTCSALL+GY RERRI+EAN LF KML+IGL PDLILYNTLIHG
Sbjct: 482 FFVWFYMSEHDVKPDVVTCSALLNGYYRERRIEEANVLFHKMLNIGLRPDLILYNTLIHG 541

Query: 626 FCSVGNVDEGCNLVKKMIENSILPNNVTHRALVLGFQKRKVIDPIESATSKLQEILLAYD 685
            CS G++D+ C L+  MIE+ ILPNN+TH+ALVLGF+K++V++P+E+A  KLQ+ILL Y 
Sbjct: 542 HCSFGSMDDACTLISMMIEHGILPNNITHQALVLGFRKKRVMNPVETANLKLQQILLKYG 601

Query: 686 LQIDANGYI 688
           + +D + Y+
Sbjct: 602 IHVDVDEYL 609

[Close]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match: gi|731415259|ref|XP_002272339.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Vitis vinifera])

HSP 1 Score: 733.0 bits (1891), Expect = 4.7e-208
Identity = 374/691 (54.12%), Postives = 503/691 (72.79%), Query Frame = 1 

Query: 19  RKRPCRYFATANSALSS--------FNYADEDCFTSEL-PAATNSDVDSDEQN------- 78
           R R  + F++AN ALSS        FN+ +  C   +L P      V+  E N       
Sbjct: 21  RNRIPKKFSSANLALSSPTLMVDEVFNHNNSCCVDDDLLPNIKCIPVEYMEWNGLSSGEN 80

Query: 79  ----YFGNDVQVSKRLKADDHEMKLIKLILGNHGFNLGSHP------KQLEIVRILDILF 138
               Y   D  +S+  KA D EM++IK+IL N G+NLGS         Q  +++IL+ LF
Sbjct: 81  DIFAYVDKDSLISENEKAVDDEMEIIKVILTNRGWNLGSQNGYRIDLSQFNVMKILNDLF 140

Query: 139 EESSDARLCLYYFKWSGCLSGSNRSLESICRMMHILVAGNMNHRAVDLMSHLVKNYGSKE 198
           EES+DA L LY+F+WS    GS  ++ES+C M+HILV+GNMNH+A+DL+ HL+     +E
Sbjct: 141 EESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEE 200

Query: 199 GFSTILLKLFYETHHERKTLETTCSMLVDCYIKERMVTAALILMGQMKSFDIFPSIWVYK 258
           G+  I LK+ +ETH +R+ LET   MLV+CY+KE M   AL L+ +M+  +IFP I V  
Sbjct: 201 GWHNIFLKI-HETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCN 260

Query: 259 AVIQALLQTNQSESAWDLLEEMHRQGISLNYSI-NLFIYHYCAKGNLSRGWKVLLELRKF 318
           ++++ALL++ Q   AWD L+EM  QG+ LN SI +LFI  YC++GN+  GWK+L+E++  
Sbjct: 261 SLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYL 320

Query: 319 GSKPDAVDYTIVINSLCKISLLKEATALLFKMTAFGVSPDSVTMSSVIDGYCKLGKLDIA 378
           G KPD V YTIVI+SLCK+SLLKEAT++LFKMT  GV  DSV++SSV+DGYCK+GK + A
Sbjct: 321 GIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEA 380

Query: 379 CKILKYFRRPLNIFIYNSFITKLCREGNTVKASEVFLEMSEVGLVPDCVSYTTMIGGYCK 438
             +L+ F    NIF++NSFI+KLC +GN +KA++VF +M E+GL+PDC SYTTM+ GYCK
Sbjct: 381 MDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCK 440

Query: 439 VGNVNRAFSFLGKMLKSGIRPSVITYTLFIDYFCKCRDVEMAEVMLQKMIIEGLKPDVVT 498
           V +++ A  +LGKMLK GIRPSV TYTL ID  CK  ++EMAE + Q+MI EGL PDVV+
Sbjct: 441 VKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVS 500

Query: 499 YNILMDGYGKKGYLHKAFELLDTMRSTNLTPDVVTYNTLINGLVTRGFLQEAKDMLDELN 558
           YN LM+GYGKKG+L KAFELL  MRS  ++PD+VTYN LI+GL+ RG + EAKD+LDEL 
Sbjct: 501 YNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELT 560

Query: 559 RRGFNIDVVTYTNIIHGYSKRGNFEEAFLVWFHMTDNCVKPDVVTCSALLSGYCRERRID 618
           RRGF+ DVVT+TNII G+S +GNFEEAFL++F+M+++ ++PDVVTCSALL+GYCR R + 
Sbjct: 561 RRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMA 620

Query: 619 EANALFCKMLDIGLNPDLILYNTLIHGFCSVGNVDEGCNLVKKMIENSILPNNVTHRALV 678
           EAN LF KMLD GL  D+ILYN+LIHGFCS+GN+D+ C+LV  MIE+ I+PNN+TH ALV
Sbjct: 621 EANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 680

Query: 679 LGFQKRKVIDPIESATSKLQEILLAYDLQID 683
           LG++K+ V +P+E A  KLQ++LL Y +Q +
Sbjct: 681 LGYEKKCVENPVERAAFKLQQLLLKYGIQAE 710

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g09990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP164_ARATH3.3e-16142.88Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH3.8e-7232.91Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR12_ARATH2.8e-6734.27Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP360_ARATH1.4e-6324.96Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
PP143_ARATH2.1e-6224.57Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
BLAST of Cp4.1LG01g09990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV38_CUCSA0.0e+0082.07Uncharacterized protein OS=Cucumis sativus GN=Csa_5G581700 PE=4 SV=1[more]
A0A061FRZ6_THECC7.6e-20556.45Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
W9R9T4_9ROSA1.3e-20451.90Uncharacterized protein OS=Morus notabilis GN=L484_012212 PE=4 SV=1[more]
M5XNQ0_PRUPE7.8e-20254.33Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021440mg PE=4 S... [more]
A0A0B0MK88_GOSAR1.7e-20157.26Uncharacterized protein OS=Gossypium arboreum GN=F383_18322 PE=4 SV=1[more]
BLAST of Cp4.1LG01g09990 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19280.11.9e-16242.88 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.12.1e-7332.91 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G05670.11.6e-6834.27 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G01110.18.1e-6524.96 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02150.11.2e-6324.57 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG01g09990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778704309|ref|XP_011655513.1|0.0e+0082.07PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Cucumis sativu... [more]
gi|659090263|ref|XP_008445921.1|0.0e+0079.88PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Cucumis melo][more]
gi|1009118967|ref|XP_015876129.1|9.2e-21253.12PREDICTED: uncharacterized protein LOC107412823 [Ziziphus jujuba][more]
gi|645251570|ref|XP_008231739.1|2.7e-21159.44PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Prunus mume][more]
gi|731415259|ref|XP_002272339.2|4.7e-20854.12PREDICTED: pentatricopeptide repeat-containing protein At2g19280 [Vitis vinifera... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g09990.1Cp4.1LG01g09990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 195..223
score: 0.18coord: 230..259
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 363..390
score: 1.7E-5coord: 604..635
score: 1.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 538..586
score: 1.1E-13coord: 397..446
score: 2.5E-15coord: 297..344
score: 3.2E-9coord: 467..514
score: 1.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 505..538
score: 3.4E-6coord: 230..262
score: 5.0E-5coord: 300..332
score: 1.6E-4coord: 540..574
score: 1.0E-7coord: 400..434
score: 1.8E-9coord: 470..504
score: 4.9E-9coord: 575..608
score: 5.5E-7coord: 611..643
score: 1.9E-8coord: 263..297
score: 0.0024coord: 435..469
score: 6.2E-7coord: 195..227
score: 0.0013coord: 366..399
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 331..361
score: 8.725coord: 227..261
score: 9.504coord: 296..330
score: 10.041coord: 608..642
score: 11.992coord: 192..226
score: 7.903coord: 573..607
score: 12.781coord: 363..397
score: 11.411coord: 468..502
score: 12.858coord: 398..432
score: 13.022coord: 538..572
score: 11.553coord: 503..537
score: 11.356coord: 433..467
score: 10.764coord: 263..295
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 195..650
score: 2.4E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 375..613
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g09990Cucsa.281160Cucumber (Gy14) v1cgycpeB0736
Cp4.1LG01g09990CmaCh04G012860Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g09990Csa5G581700Cucumber (Chinese Long) v2cpecuB418
Cp4.1LG01g09990MELO3C011779Melon (DHL92) v3.5.1cpemeB376
Cp4.1LG01g09990CSPI05G20530Wild cucumber (PI 183967)cpecpiB417
Cp4.1LG01g09990MELO3C011779.2Melon (DHL92) v3.6.1cpemedB436
Cp4.1LG01g09990CsaV3_5G029290Cucumber (Chinese Long) v3cpecucB0520
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g09990Wax gourdcpewgoB0556
Cp4.1LG01g09990Cucurbita pepo (Zucchini)cpecpeB036
Cp4.1LG01g09990Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g09990Cucurbita maxima (Rimu)cmacpeB434
Cp4.1LG01g09990Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g09990Cucurbita moschata (Rifu)cmocpeB399
Cp4.1LG01g09990Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g09990Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g09990Bottle gourd (USVL1VR-Ls)cpelsiB358
Cp4.1LG01g09990Watermelon (Charleston Gray)cpewcgB357
Cp4.1LG01g09990Watermelon (97103) v1cpewmB456
Cp4.1LG01g09990Cucumber (Gy14) v2cgybcpeB628
Cp4.1LG01g09990Silver-seed gourdcarcpeB1020
Cp4.1LG01g09990Silver-seed gourdcarcpeB1021
Cp4.1LG01g09990Silver-seed gourdcarcpeB1177