Cp4.1LG01g08900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAP2-like ethylene-responsive transcription factor
LocationCp4.1LG01 : 4588880 .. 4590573 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGGTCGGATTTGTGTTTTGGGTTTTTGTATAATGGGCGTGTTGCTCTCAAATCTAGTTTGTCTTGGGGGAATGTTCTTGTTGTATTAGGAAAGCATTTAGAATGTTATGAACAAATTTGGAAAGTGTTCATGAGCCTAAACTGATATCACATGCTACTCACGTGCTTTTACTATTTGTTTATTTGTTTGTTTGACTATTACTAAGAGTTGGAATTGTCTTTTTTTTGCATAATATCTGCGCTGCTGATTTCAACCTTTGTTCTTCAGTTTATTTAGGTATCAAATTTCTTCCCTTTTTTTTTTTTGGCTATGTCTTCTTTTTCCACATTTATATAGATATTATTTATTGAGTTTATGAATCATATTTTTGCAGGTGGGTATGATAAGGAAGATAAGGCAGCTAGGGCTTATGATTTGGCGGCTTTGAAGTACTGGGGTCCCACTGCAACCACCAATTTTCCTGTAATATATATATACATAACACTCTTTCCATAGAATTGTAATATGGTAACTATATACACTTCTATGTCATACGTAGTGTTTTTCTAACTTTTTGTTCACTCATTTTTTTGTCCCTTTCCGGGTTTCGTCTCTTAGGTTTCGAATTACGCCAAAGAATTGGAAGAGATGAAACATGTCACTAAGCAAGAGTTTATTGCATCTTTGCGAAGGTAAGTTTCGGGTTGTTTTGTTTTTGTTTTTGTTTTGTTTTCCTTTGTTTGTTTGCTGAAAATTCTTGTTTGGGCTTCAGAAAAAGCAGTGGTTTTTCGAGGGGTGCGTCTATTTACAGAGGTGTGACGAGGCATCATCAGCAAGGTCGATGGCAGGCGAGGATTGGGCGTGTTGCAGGGAATAAGGATTTGTATCTCGGGACATTTGGTAGGTTTATTTGCGTGATGTTAATGTGGGAAATATGTTTTGATTACTTATGTTTATGTTTAATGCTAACTAGCTTGACTCTTCTCTTGTAGCTACTGAGGAGGAAGCTGCTGAGGCTTATGATATAGCAGCGATCAAGTTTAGGGGTTTGAATGCCGTGACGAACTTCGAGATGAATCGATACGATGTGGAGGCTATTGCGAAGAGTGCATTGCCAATTGGGGGAGCTGCAAAAAGGCTGAAGCTTTGCCTTGAATCGGATCAGAAGCAGATATCAAATCATGATCAAGCAGCCCAATGCAGCAGTGGAAGCAACAGCATCAACTTCGGCGCCCCTATTCAGTCTATGCCACCCATCCCCTGTGGAATTCCATATGATACTGCAGCCATGCTGTATCACCATAACTACTTCCATCATCTCCAACCAAACCCTCTCGGCTCGTCGGAGTCGACCACCCCAGCCATTGGAGCATCTACCATGGCACCTCAAGCAGCCGAGTTTTTTGTTTGGCCTCACCAGTATTAGAATTTTGGCATTTACTGATATGATGATCGTAGTAAAATGTAGCTAACACATGACCCGATTAGTTCGTCGATGCTGTCTGGGTAACCTGGATCTTTATCCAAAATGACTGTAGTTCAACTCTTAACCCCTTTGAAGTAGGTACAAGGAAAGAGGTAGGGTGGTGGGTTTTTGGTATGGAAAAACTAAACTTGTTATTTGTAGGAAGTTGATGAATTTTGTAATGTTAACACCCCATGAATATCCTTGAGATTTTGACGTGTTTGAATGTGGAACAACAGATGTGATAT

mRNA sequence

AACGGTCGGATTTGTGTTTTGGGTTTTTGTATAATGGGCGTGTTGCTCTCAAATCTAGTTTGTCTTGGGGGAATGTTCTTGTTGTATTAGGAAAGCATTTAGAATGTTATGAACAAATTTGGAAAGTGTTCATGAGCCTAAACTGATATCACATGCTACTCACGTGCTTTTACTATTTGTTTATTTGTTTGTTTGACTATTACTAAGAGTTGGAATTGTCTTTTTTTTGCATAATATCTGCGCTGCTGATTTCAACCTTTGTTCTTCAGTTTATTTAGGTGGGTATGATAAGGAAGATAAGGCAGCTAGGGCTTATGATTTGGCGGCTTTGAAGTACTGGGGTCCCACTGCAACCACCAATTTTCCTGTTTCGAATTACGCCAAAGAATTGGAAGAGATGAAACATGTCACTAAGCAAGAGTTTATTGCATCTTTGCGAAGAAAAAGCAGTGGTTTTTCGAGGGGTGCGTCTATTTACAGAGGTGTGACGAGGCATCATCAGCAAGGTCGATGGCAGGCGAGGATTGGGCGTGTTGCAGGGAATAAGGATTTGTATCTCGGGACATTTGCTACTGAGGAGGAAGCTGCTGAGGCTTATGATATAGCAGCGATCAAGTTTAGGGGTTTGAATGCCGTGACGAACTTCGAGATGAATCGATACGATGTGGAGGCTATTGCGAAGAGTGCATTGCCAATTGGGGGAGCTGCAAAAAGGCTGAAGCTTTGCCTTGAATCGGATCAGAAGCAGATATCAAATCATGATCAAGCAGCCCAATGCAGCAGTGGAAGCAACAGCATCAACTTCGGCGCCCCTATTCAGTCTATGCCACCCATCCCCTGTGGAATTCCATATGATACTGCAGCCATGCTGTATCACCATAACTACTTCCATCATCTCCAACCAAACCCTCTCGGCTCGTCGGAGTCGACCACCCCAGCCATTGGAGCATCTACCATGGCACCTCAAGCAGCCGAGTTTTTTGTTTGGCCTCACCAGTATTAGAATTTTGGCATTTACTGATATGATGATCGTAGTAAAATGTAGCTAACACATGACCCGATTAGTTCGTCGATGCTGTCTGGGTAACCTGGATCTTTATCCAAAATGACTGTAGTTCAACTCTTAACCCCTTTGAAGTAGGTACAAGGAAAGAGGTAGGGTGGTGGGTTTTTGGTATGGAAAAACTAAACTTGTTATTTGTAGGAAGTTGATGAATTTTGTAATGTTAACACCCCATGAATATCCTTGAGATTTTGACGTGTTTGAATGTGGAACAACAGATGTGATAT

Coding sequence (CDS)

ATGAAACATGTCACTAAGCAAGAGTTTATTGCATCTTTGCGAAGAAAAAGCAGTGGTTTTTCGAGGGGTGCGTCTATTTACAGAGGTGTGACGAGGCATCATCAGCAAGGTCGATGGCAGGCGAGGATTGGGCGTGTTGCAGGGAATAAGGATTTGTATCTCGGGACATTTGCTACTGAGGAGGAAGCTGCTGAGGCTTATGATATAGCAGCGATCAAGTTTAGGGGTTTGAATGCCGTGACGAACTTCGAGATGAATCGATACGATGTGGAGGCTATTGCGAAGAGTGCATTGCCAATTGGGGGAGCTGCAAAAAGGCTGAAGCTTTGCCTTGAATCGGATCAGAAGCAGATATCAAATCATGATCAAGCAGCCCAATGCAGCAGTGGAAGCAACAGCATCAACTTCGGCGCCCCTATTCAGTCTATGCCACCCATCCCCTGTGGAATTCCATATGATACTGCAGCCATGCTGTATCACCATAACTACTTCCATCATCTCCAACCAAACCCTCTCGGCTCGTCGGAGTCGACCACCCCAGCCATTGGAGCATCTACCATGGCACCTCAAGCAGCCGAGTTTTTTGTTTGGCCTCACCAGTATTAG

Protein sequence

MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISNHDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTTPAIGASTMAPQAAEFFVWPHQY
Homology
[Close]
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.6e-69
Identity = 148/238 (62.18%), Postives = 164/238 (68.91%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+TKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 342 MKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 401

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLE----SDQK 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAI KSALPIGGAAKRLKL LE    S+QK
Sbjct: 402 EEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKSALPIGGAAKRLKLSLEAAASSEQK 461

Query: 121 QISNHDQ-------------AAQCSSGSNSINF----GAPIQSMPPIPCGIPYDTAAMLY 180
            I  H Q               Q S   +SINF     + +QS   IPCGIP++ AA+ +
Sbjct: 462 PILGHHQLHHFQQQQQQQQLQLQSSPNHSSINFALCPNSAVQSQQIIPCGIPFEAAALYH 521

Query: 181 HH-------------NYFHHLQPN----PLGSSESTTPAIGASTMAPQAAEFFVWPHQ 201
           HH             N+F H   N      GS+ ++        MAP  AEFF+WP+Q
Sbjct: 522 HHQQQQQHQQQQQQQNFFQHFPANAASDSTGSNNNSNVQGTMGLMAPNPAEFFLWPNQ 579

[Close]
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 6.7e-62
Identity = 130/205 (63.41%), Postives = 150/205 (73.17%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           M H+TKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 308 MNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 367

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAA---KRLKLCLESDQKQ 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYD+EA+  S+LP+GGAA    +LKL LES    
Sbjct: 368 EEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNSSLPVGGAAAKRHKLKLALESPSSS 427

Query: 121 ISNHDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES 180
            S+H+   Q    S+S       Q+   IPCGIP++ + + YH N+F H           
Sbjct: 428 SSDHNLQQQQLLPSSS----PSDQNPNSIPCGIPFEPSVLYYHQNFFQHY---------- 487

Query: 181 TTPAIGASTM-AP-QAAEFFVWPHQ 201
             P +  ST+ AP   AEFF+WP+Q
Sbjct: 488 --PLVSDSTIQAPMNQAEFFLWPNQ 496

[Close]
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.0e-49
Identity = 113/180 (62.78%), Postives = 137/180 (76.11%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK++T+QEF+AS+RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TE
Sbjct: 267 MKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTE 326

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKS-ALPI-GGAAKRLK--LCLESDQK 120
           EEAAEAYDIAAIKFRGLNAVTNFE+NRYDV+AI +S  LPI GGAAKRLK    LES +K
Sbjct: 327 EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRK 386

Query: 121 Q-----ISNHDQAAQCSSGSNSINFGAPIQSMP-PIPCGIPYDTAAMLYHHNYFHHLQPN 171
           +     + ++      +SGS+S+   + +Q  P P+    P++    L+HH     LQ N
Sbjct: 387 REEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFE---HLHHHQPLLTLQNN 443

[Close]
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.5e-48
Identity = 114/188 (60.64%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+T+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TE
Sbjct: 258 MKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTE 317

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSA-LPI-GGAAKRLK--LCLESDQK 120
           EEAAEAYDIAAIKFRGLNAVTNFE+NRYDV+AI +S+ LPI GGAAKRLK    LES +K
Sbjct: 318 EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRK 377

Query: 121 QI-------SNHDQAAQCSSGSNSINFGAPIQSMPPIPCGI--PYDTAAMLYHHNYFHHL 176
           +        S+       S+GS S +    +Q   P P  I  P +    L +++  H+ 
Sbjct: 378 REAEMIALGSSFQYGGGSSTGSGSTSSRLQLQ---PYPLSIQQPLEPFLSLQNNDISHYN 437

[Close]
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus GN=BBM1 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46
Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+T+QE++ASLRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLYLGTF T+
Sbjct: 287 MKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQ 346

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKS-ALPIGGAAKRLK 109
           EEAAEAYDIAAIKFRGL AVTNF+MNRY+V+AI +S +LPIG AAKRLK
Sbjct: 347 EEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPIGSAAKRLK 395

[Close]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match: A0A0A0L6U3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G114470 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-96
Identity = 178/202 (88.12%), Postives = 188/202 (93.07%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK VT+QEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 80  MKQVTRQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 139

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRGLNAVTNFEM+RYDVEAIAKSALPIGGAAKRLKLCLESDQK I N
Sbjct: 140 EEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPN 199

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTTP 180
           HDQA QCSSGSN+INFG  +Q++PPIPCGIPYDTAA+LYHHNYFHHLQPN +GSSEST+P
Sbjct: 200 HDQATQCSSGSNNINFGTAMQAVPPIPCGIPYDTAAVLYHHNYFHHLQPNAIGSSESTSP 259

Query: 181 AIGA-STMAP-QAAEFFVWPHQ 201
            I    T+ P QAAEFFVWPHQ
Sbjct: 260 GIAVPGTVGPHQAAEFFVWPHQ 281

[Close]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match: F6HRZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1291g00010 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.3e-79
Identity = 158/204 (77.45%), Postives = 169/204 (82.84%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 309 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 368

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAIA SALPIGGAAKRLKL LESDQK   N
Sbjct: 369 EEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQKPCLN 428

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES--T 180
            DQ  Q S+ S+ I FGA IQ +P IPCGIP DTA   YHHN F+HL  + +G+S S  T
Sbjct: 429 LDQQTQSSASSSGITFGA-IQPIPAIPCGIPLDTATAFYHHNLFNHLHSSNMGASNSPGT 488

Query: 181 TPAIGASTMA--PQAAEFFVWPHQ 201
           T +   + MA  P  AEFF+WPHQ
Sbjct: 489 TSSSMPTPMALLPPPAEFFIWPHQ 511

[Close]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match: F6GZD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0772g00020 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.3e-79
Identity = 158/204 (77.45%), Postives = 169/204 (82.84%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 254 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 313

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAIA SALPIGGAAKRLKL LESDQK   N
Sbjct: 314 EEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQKPCLN 373

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES--T 180
            DQ  Q S+ S+ I FGA IQ +P IPCGIP DTA   YHHN F+HL  + +G+S S  T
Sbjct: 374 LDQQTQSSASSSGITFGA-IQPIPAIPCGIPLDTATAFYHHNLFNHLHSSNMGASNSPGT 433

Query: 181 TPAIGASTMA--PQAAEFFVWPHQ 201
           T +   + MA  P  AEFF+WPHQ
Sbjct: 434 TSSSMPTPMALLPPPAEFFIWPHQ 456

[Close]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match: A0A061DHK6_THECC (AP2-like ethylene-responsive transcription factor AIL6 OS=Theobroma cacao GN=TCM_000974 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-77
Identity = 154/205 (75.12%), Postives = 170/205 (82.93%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 315 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 374

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAIAKS+LPIGGAAKRLKL LES+QK I N
Sbjct: 375 EEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIAKSSLPIGGAAKRLKLSLESEQKPIVN 434

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDT--AAMLYHHNYFHHLQPNPLGSSEST 180
           H+Q  QCSS SN+I+F AP+Q +  IPCGIP+DT  AA  Y  N +H LQ   +G S+  
Sbjct: 435 HEQQPQCSSNSNNISF-APMQPISAIPCGIPFDTAAAAAFYQQNLYHQLQAANIGISDPP 494

Query: 181 TPAIGAST---MAPQAAEFFVWPHQ 201
             +   +T   +  Q AEFF+WPHQ
Sbjct: 495 GSSSAMATQLNVMQQPAEFFLWPHQ 518

[Close]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match: V7CM70_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G146400g PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-76
Identity = 149/207 (71.98%), Postives = 168/207 (81.16%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 295 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 354

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQK-QIS 120
           EEAAEAYDIAAIKFRG NAVTNFEMNRYDV+AI KS+LP+GGAAKRLKL LES+QK  +S
Sbjct: 355 EEAAEAYDIAAIKFRGANAVTNFEMNRYDVDAIMKSSLPVGGAAKRLKLSLESEQKVAVS 414

Query: 121 NHDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTT 180
           ++ Q  QC +GS SINF A  Q +  IPCGIP+D++   YHHN F H  P+  G++ ST 
Sbjct: 415 SNQQNPQCGNGSGSINFSAIHQPIASIPCGIPFDSSTAYYHHNLFQHFHPSNAGTAVSTV 474

Query: 181 PAIGASTM------APQAAEFFVWPHQ 201
            +  A+ +      A  AAEFF+WPHQ
Sbjct: 475 TSANATGLNALPPPATTAAEFFIWPHQ 501

[Close]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match: AT5G10510.3 (AT5G10510.3 AINTEGUMENTA-like 6)

HSP 1 Score: 261.9 bits (668), Expect = 3.2e-70
Identity = 148/238 (62.18%), Postives = 164/238 (68.91%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+TKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 365 MKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 424

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLE----SDQK 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAI KSALPIGGAAKRLKL LE    S+QK
Sbjct: 425 EEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKSALPIGGAAKRLKLSLEAAASSEQK 484

Query: 121 QISNHDQ-------------AAQCSSGSNSINF----GAPIQSMPPIPCGIPYDTAAMLY 180
            I  H Q               Q S   +SINF     + +QS   IPCGIP++ AA+ +
Sbjct: 485 PILGHHQLHHFQQQQQQQQLQLQSSPNHSSINFALCPNSAVQSQQIIPCGIPFEAAALYH 544

Query: 181 HH-------------NYFHHLQPN----PLGSSESTTPAIGASTMAPQAAEFFVWPHQ 201
           HH             N+F H   N      GS+ ++        MAP  AEFF+WP+Q
Sbjct: 545 HHQQQQQHQQQQQQQNFFQHFPANAASDSTGSNNNSNVQGTMGLMAPNPAEFFLWPNQ 602

[Close]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match: AT5G65510.1 (AT5G65510.1 AINTEGUMENTA-like 7)

HSP 1 Score: 238.4 bits (607), Expect = 3.8e-63
Identity = 130/205 (63.41%), Postives = 150/205 (73.17%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           M H+TKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 308 MNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 367

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAA---KRLKLCLESDQKQ 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYD+EA+  S+LP+GGAA    +LKL LES    
Sbjct: 368 EEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNSSLPVGGAAAKRHKLKLALESPSSS 427

Query: 121 ISNHDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES 180
            S+H+   Q    S+S       Q+   IPCGIP++ + + YH N+F H           
Sbjct: 428 SSDHNLQQQQLLPSSS----PSDQNPNSIPCGIPFEPSVLYYHQNFFQHY---------- 487

Query: 181 TTPAIGASTM-AP-QAAEFFVWPHQ 201
             P +  ST+ AP   AEFF+WP+Q
Sbjct: 488 --PLVSDSTIQAPMNQAEFFLWPNQ 496

[Close]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match: AT1G51190.1 (AT1G51190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-50
Identity = 113/180 (62.78%), Postives = 137/180 (76.11%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK++T+QEF+AS+RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TE
Sbjct: 267 MKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTE 326

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKS-ALPI-GGAAKRLK--LCLESDQK 120
           EEAAEAYDIAAIKFRGLNAVTNFE+NRYDV+AI +S  LPI GGAAKRLK    LES +K
Sbjct: 327 EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRK 386

Query: 121 Q-----ISNHDQAAQCSSGSNSINFGAPIQSMP-PIPCGIPYDTAAMLYHHNYFHHLQPN 171
           +     + ++      +SGS+S+   + +Q  P P+    P++    L+HH     LQ N
Sbjct: 387 REEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFE---HLHHHQPLLTLQNN 443

[Close]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match: AT3G20840.1 (AT3G20840.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-49
Identity = 114/188 (60.64%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+T+QEF+A++RRKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+TE
Sbjct: 258 MKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTE 317

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSA-LPI-GGAAKRLK--LCLESDQK 120
           EEAAEAYDIAAIKFRGLNAVTNFE+NRYDV+AI +S+ LPI GGAAKRLK    LES +K
Sbjct: 318 EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRK 377

Query: 121 QI-------SNHDQAAQCSSGSNSINFGAPIQSMPPIPCGI--PYDTAAMLYHHNYFHHL 176
           +        S+       S+GS S +    +Q   P P  I  P +    L +++  H+ 
Sbjct: 378 REAEMIALGSSFQYGGGSSTGSGSTSSRLQLQ---PYPLSIQQPLEPFLSLQNNDISHYN 437

[Close]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match: AT5G17430.1 (AT5G17430.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-47
Identity = 92/109 (84.40%), Postives = 104/109 (95.41%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKH+T+QE++ASLRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLYLGTF T+
Sbjct: 287 MKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQ 346

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKS-ALPIGGAAKRLK 109
           EEAAEAYDIAAIKFRGL+AVTNF+MNRY+V+AI +S +LPIG +AKRLK
Sbjct: 347 EEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLK 395

[Close]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match: gi|659102498|ref|XP_008452164.1| (PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 4.4e-98
Identity = 180/201 (89.55%), Postives = 187/201 (93.03%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK VTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 310 MKLVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 369

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQK I N
Sbjct: 370 EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPN 429

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTTP 180
           HDQA QCSSGSN+INFG  +Q++PPIPCGIPYDTAA+LYHHNYFHHLQPN +GSSEST+P
Sbjct: 430 HDQAIQCSSGSNNINFGTAMQAVPPIPCGIPYDTAAVLYHHNYFHHLQPNAIGSSESTSP 489

Query: 181 AIGA-STMAPQAAEFFVWPHQ 201
            I    TM PQA EFFVWPHQ
Sbjct: 490 GIAVPGTMGPQATEFFVWPHQ 510

[Close]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match: gi|778676521|ref|XP_004134266.2| (PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 3.2e-96
Identity = 178/202 (88.12%), Postives = 188/202 (93.07%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK VT+QEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 314 MKQVTRQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 373

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRGLNAVTNFEM+RYDVEAIAKSALPIGGAAKRLKLCLESDQK I N
Sbjct: 374 EEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPN 433

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTTP 180
           HDQA QCSSGSN+INFG  +Q++PPIPCGIPYDTAA+LYHHNYFHHLQPN +GSSEST+P
Sbjct: 434 HDQATQCSSGSNNINFGTAMQAVPPIPCGIPYDTAAVLYHHNYFHHLQPNAIGSSESTSP 493

Query: 181 AIGA-STMAP-QAAEFFVWPHQ 201
            I    T+ P QAAEFFVWPHQ
Sbjct: 494 GIAVPGTVGPHQAAEFFVWPHQ 515

[Close]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match: gi|700201174|gb|KGN56307.1| (hypothetical protein Csa_3G114470 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 3.2e-96
Identity = 178/202 (88.12%), Postives = 188/202 (93.07%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MK VT+QEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 80  MKQVTRQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 139

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRGLNAVTNFEM+RYDVEAIAKSALPIGGAAKRLKLCLESDQK I N
Sbjct: 140 EEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPN 199

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSESTTP 180
           HDQA QCSSGSN+INFG  +Q++PPIPCGIPYDTAA+LYHHNYFHHLQPN +GSSEST+P
Sbjct: 200 HDQATQCSSGSNNINFGTAMQAVPPIPCGIPYDTAAVLYHHNYFHHLQPNAIGSSESTSP 259

Query: 181 AIGA-STMAP-QAAEFFVWPHQ 201
            I    T+ P QAAEFFVWPHQ
Sbjct: 260 GIAVPGTVGPHQAAEFFVWPHQ 281

[Close]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match: gi|359497499|ref|XP_003635541.1| (PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Vitis vinifera])

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-78
Identity = 158/204 (77.45%), Postives = 169/204 (82.84%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 312 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 371

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAIA SALPIGGAAKRLKL LESDQK   N
Sbjct: 372 EEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQKPCLN 431

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES--T 180
            DQ  Q S+ S+ I FGA IQ +P IPCGIP DTA   YHHN F+HL  + +G+S S  T
Sbjct: 432 LDQQTQSSASSSGITFGA-IQPIPAIPCGIPLDTATAFYHHNLFNHLHSSNMGASNSPGT 491

Query: 181 TPAIGASTMA--PQAAEFFVWPHQ 201
           T +   + MA  P  AEFF+WPHQ
Sbjct: 492 TSSSMPTPMALLPPPAEFFIWPHQ 514

[Close]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match: gi|731436968|ref|XP_010647330.1| (PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Vitis vinifera])

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-78
Identity = 158/204 (77.45%), Postives = 169/204 (82.84%), Query Frame = 1 

Query: 1   MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 60
           MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE
Sbjct: 276 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATE 335

Query: 61  EEAAEAYDIAAIKFRGLNAVTNFEMNRYDVEAIAKSALPIGGAAKRLKLCLESDQKQISN 120
           EEAAEAYDIAAIKFRG+NAVTNFEMNRYDVEAIA SALPIGGAAKRLKL LESDQK   N
Sbjct: 336 EEAAEAYDIAAIKFRGVNAVTNFEMNRYDVEAIANSALPIGGAAKRLKLSLESDQKPCLN 395

Query: 121 HDQAAQCSSGSNSINFGAPIQSMPPIPCGIPYDTAAMLYHHNYFHHLQPNPLGSSES--T 180
            DQ  Q S+ S+ I FGA IQ +P IPCGIP DTA   YHHN F+HL  + +G+S S  T
Sbjct: 396 LDQQTQSSASSSGITFGA-IQPIPAIPCGIPLDTATAFYHHNLFNHLHSSNMGASNSPGT 455

Query: 181 TPAIGASTMA--PQAAEFFVWPHQ 201
           T +   + MA  P  AEFF+WPHQ
Sbjct: 456 TSSSMPTPMALLPPPAEFFIWPHQ 478

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AIL6_ARATH5.6e-6962.18AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana G... [more]
AIL7_ARATH6.7e-6263.41AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana G... [more]
PLET2_ARATH5.0e-4962.78AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana G... [more]
PLET1_ARATH5.5e-4860.64AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana G... [more]
BBM1_BRANA1.0e-4685.32AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus GN=BBM1... [more]
BLAST of Cp4.1LG01g08900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6U3_CUCSA2.2e-9688.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G114470 PE=4 SV=1[more]
F6HRZ0_VITVI9.3e-7977.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1291g00010 PE=4 SV=... [more]
F6GZD5_VITVI9.3e-7977.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0772g00020 PE=4 SV=... [more]
A0A061DHK6_THECC5.1e-7775.12AP2-like ethylene-responsive transcription factor AIL6 OS=Theobroma cacao GN=TCM... [more]
V7CM70_PHAVU1.5e-7671.98Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G146400g PE=4 SV=1[more]
BLAST of Cp4.1LG01g08900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10510.33.2e-7062.18 AINTEGUMENTA-like 6[more]
AT5G65510.13.8e-6363.41 AINTEGUMENTA-like 7[more]
AT1G51190.12.8e-5062.78 Integrase-type DNA-binding superfamily protein[more]
AT3G20840.13.1e-4960.64 Integrase-type DNA-binding superfamily protein[more]
AT5G17430.11.0e-4784.40 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cp4.1LG01g08900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102498|ref|XP_008452164.1|4.4e-9889.55PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Cucumis melo][more]
gi|778676521|ref|XP_004134266.2|3.2e-9688.12PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Cucumis sativ... [more]
gi|700201174|gb|KGN56307.1|3.2e-9688.12hypothetical protein Csa_3G114470 [Cucumis sativus][more]
gi|359497499|ref|XP_003635541.1|1.3e-7877.45PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Vitis vinifer... [more]
gi|731436968|ref|XP_010647330.1|1.3e-7877.45PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Vitis vinifer... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08900.1Cp4.1LG01g08900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 27..38
score: 6.4E-5coord: 66..86
score: 6.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 26..84
score: 9.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 25..76
score: 6.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 26..90
score: 7.3
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 26..84
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 25..85
score: 1.5
NoneNo IPR availablePANTHERPTHR32467:SF33AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6-RELATEDcoord: 1..168
score: 3.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g08900CmaCh16G007430Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g08900CmoCh16G008040Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g08900CmoCh04G009220Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g08900Bhi11G000786Wax gourdcpewgoB0486
Cp4.1LG01g08900Carg14256Silver-seed gourdcarcpeB1302
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g08900Melon (DHL92) v3.6.1cpemedB482
Cp4.1LG01g08900Melon (DHL92) v3.6.1cpemedB485
Cp4.1LG01g08900Silver-seed gourdcarcpeB1417
Cp4.1LG01g08900Cucumber (Chinese Long) v3cpecucB0491
Cp4.1LG01g08900Wax gourdcpewgoB0478
Cp4.1LG01g08900Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g08900Cucumber (Gy14) v1cgycpeB0680
Cp4.1LG01g08900Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g08900Wild cucumber (PI 183967)cpecpiB392
Cp4.1LG01g08900Cucumber (Chinese Long) v2cpecuB393
Cp4.1LG01g08900Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g08900Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g08900Watermelon (97103) v1cpewmB387
Cp4.1LG01g08900Melon (DHL92) v3.5.1cpemeB409
Cp4.1LG01g08900Cucumber (Gy14) v2cgybcpeB369