Cp4.1LG01g08550 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionExpansin
LocationCp4.1LG01 : 4910298 .. 4911472 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGTGAGTCTTTGAATGAAATAATTATTAAATGAGATTTAAAATATATATATATATATATATATTTTGAATTAAAAAATTAACTTTTAAAAATATTTCTAAAAGGTACTCTAAAATTAAGAAAATTGTTAGTACACATGTTTCCAATAATTTAAGAAAATGCACAATTTATTAATCATACATATCTGGCAATCAACTTTAATATTTGAACATTATGCCATTTAATCATTTTCTTGATATATATATATATATATATAAAAGAAAATAATATTATTAATATTGTAATAAAGTTATGTGATTATTTATTAATCAGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGTATAACATGATACAATATTTAGTAAGTTGGTAGAAATTTAAATAAAACGTTCAATTTTTTTTAATATATAGTTTTAAATGTTGTATTTTTAAAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

mRNA sequence

CCATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

Coding sequence (CDS)

ATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

Protein sequence

MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSSMIQFS
Homology
[Close]
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.3e-94
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 1 

Query: 32  WLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNY 91
           W+ AHAT+YG + +P SLGGACGYDN +HAGFG +TAA+SG LFR GE+CG C+ V C++
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDF 86

Query: 92  NVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLY 151
             DPKWCLR  AV +TATNFCP+NNN GWC+ PR HFDMSSPAF  IAR+GNEGIVPV Y
Sbjct: 87  PADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFY 146

Query: 152 KRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQ 211
           +RV C+R+GGVRFT+RGQ NFNMVMISNVGG G V++  V+GS+ +TW+ M RNWGANWQ
Sbjct: 147 RRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206

Query: 212 ANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 252
           ++ DLR QR+SFKVTL D +T  F+NVVPSSW FGQTFSS
Sbjct: 207 SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSS 246

[Close]
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-74
Identity = 126/250 (50.40%), Postives = 170/250 (68.00%), Query Frame = 1 

Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           +L A+ F  +    +      WL AHATFYG      ++GGACGY N +  G+  NTAA+
Sbjct: 7   LLVAMIFSTMFFMKISSVSAGWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAAL 66

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSN-----NNGGWCDPPR 130
           S ALF  G++CG C+ ++C+    P+WCL+ +++ ITATNFCP N     +NGGWC+PPR
Sbjct: 67  STALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPR 126

Query: 131 AHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGD 190
            HFDM+ PAFLTIA+    GIVP+LYK+V CRR GG+RFT+ G++ F +V+ISNV G G+
Sbjct: 127 PHFDMAQPAFLTIAKY-KAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGE 186

Query: 191 VKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRF 250
           +   W+KGS++  W  M RNWGAN+Q+N  L  Q +SFKV L DG     +NVVPS+WRF
Sbjct: 187 ISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRF 246

Query: 251 GQTFSSMIQF 256
           GQ+F S + F
Sbjct: 247 GQSFKSNVNF 255

[Close]
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-72
Identity = 127/229 (55.46%), Postives = 163/229 (71.18%), Query Frame = 1 

Query: 26  HGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACF 85
           HGD G W   HATFYG +    ++GGACGY N +  G+G NTAA+S ALF  G  CGAC+
Sbjct: 24  HGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACY 83

Query: 86  LVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFDMSSPAFLTIAR 145
            + CN   DP+WCL    + +TATNFCP     SN+NGGWC+PP  HFD++ PAFL IA 
Sbjct: 84  EMKCND--DPRWCLGS-TITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIA- 143

Query: 146 QGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWM 205
           Q   GIVPV ++RV C +KGG+RFT+ G S FN+V+ISNVGG+GDV A  +KGS+T++W 
Sbjct: 144 QYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQ 203

Query: 206 PMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 250
            M RNWG NWQ+N  + +Q +SF+VT  DGRTL   +V PS+W+FGQT+
Sbjct: 204 AMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248

[Close]
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.5e-70
Identity = 130/243 (53.50%), Postives = 166/243 (68.31%), Query Frame = 1 

Query: 15  LFFMVVG--GSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSG 74
           L  ++VG   S V G GG W++AHATFYG      ++GGACGY N +  G+G +TAA+S 
Sbjct: 7   LVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALST 66

Query: 75  ALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAH 134
           ALF  G +CG+CF + C    D KWCL   ++ +TATNFCP     +NNNGGWC+PP  H
Sbjct: 67  ALFNNGLSCGSCFEIRCEN--DGKWCL-PGSIVVTATNFCPPNNALANNNGGWCNPPLEH 126

Query: 135 FDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVK 194
           FD++ P F  IA Q   GIVPV Y+RV CRR+GG+RFT+ G S FN+V+I+NVGG+GDV 
Sbjct: 127 FDLAQPVFQRIA-QYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVH 186

Query: 195 AAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQ 251
           +A +KGSRT  W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+   N  P+ W +GQ
Sbjct: 187 SAAIKGSRT-VWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQ 244

[Close]
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 5.5e-69
Identity = 122/247 (49.39%), Postives = 165/247 (66.80%), Query Frame = 1 

Query: 15  LFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGAL 74
           L  ++   S +      W    ATFYG      ++GGACGY N + +G+G NTAA+S AL
Sbjct: 15  LVVVIAAASLIAPTTAGWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSAL 74

Query: 75  FRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFD 134
           F  G +CG C+ + C++  +P+WCL+ R V IT TN CP     S+N+GGWC+PPR HFD
Sbjct: 75  FNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFD 134

Query: 135 MSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAA 194
           M+ PA+L I      GIVPVLY+RV C ++GGVRFT+ G + F +V+ISNV GSG +++ 
Sbjct: 135 MAEPAWLQIGIY-KAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSV 194

Query: 195 WVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 254
           WVKG  T   MP+ RNWGANWQ++  L  Q ++F VT   G+TL F N+VP+ W+FGQ+F
Sbjct: 195 WVKGPNTDR-MPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSF 254

Query: 255 SSMIQFS 257
           SS +QFS
Sbjct: 255 SSNLQFS 259

[Close]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match: A0A0A0L6M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104900 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-130
Identity = 225/259 (86.87%), Postives = 236/259 (91.12%), Query Frame = 1 

Query: 1   MVY-GNGGFVWVLYALFFMVVGGS--FVHGDGGAWLHAHATFYGADQNPTSLGGACGYDN 60
           M+Y  N GFVW +    FMV+G    FVHGD  +W  AHATFYGADQNPTSLGGACGYDN
Sbjct: 1   MIYENNNGFVWFI----FMVIGLGEFFVHGDN-SWFDAHATFYGADQNPTSLGGACGYDN 60

Query: 61  TFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNN 120
           TFHAGFGINTAAVSG LFR GEACGACFLVICNYN DPKWCLRRRAV +TATNFCPSNNN
Sbjct: 61  TFHAGFGINTAAVSGVLFRRGEACGACFLVICNYNADPKWCLRRRAVTVTATNFCPSNNN 120

Query: 121 GGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMI 180
           GGWCDPPR+HFDMSSPAFLTIARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVMI
Sbjct: 121 GGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVMI 180

Query: 181 SNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVN 240
           SNVGGSGDVKAAWVKGS+ R W PMHRNWGANWQANVDLRNQRMSFK+TL+DGRTLEFVN
Sbjct: 181 SNVGGSGDVKAAWVKGSKMRMWTPMHRNWGANWQANVDLRNQRMSFKLTLLDGRTLEFVN 240

Query: 241 VVPSSWRFGQTFSSMIQFS 257
           VVPSSWRFGQTFSSM+QFS
Sbjct: 241 VVPSSWRFGQTFSSMVQFS 254

[Close]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match: U5GTG3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41210g PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-113
Identity = 186/246 (75.61%), Postives = 213/246 (86.59%), Query Frame = 1 

Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           VL   F   V    + G  G WL+AHATFYGA+Q+P +LGGACGYDNTFHAGFG+NTAAV
Sbjct: 9   VLVCQFLFFVCLLSLKGINGGWLNAHATFYGANQSPATLGGACGYDNTFHAGFGVNTAAV 68

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDM 130
           SGALFRGGEACGAC+ ++CNY  DPKWCLRR  + +TATNFCP NNNGGWCDPPR HFDM
Sbjct: 69  SGALFRGGEACGACYQLMCNYRADPKWCLRRAVITVTATNFCPPNNNGGWCDPPRQHFDM 128

Query: 131 SSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAW 190
           S PAF  IARQGNEGIVPVLY+RVSC R+GGVRFTLRGQSNFN+VMISNVGGSGD+KAAW
Sbjct: 129 SMPAFFRIARQGNEGIVPVLYRRVSCTRRGGVRFTLRGQSNFNLVMISNVGGSGDIKAAW 188

Query: 191 VKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFS 250
           V+GSR R+W+P+HRNWGANWQ++ DLRNQ++SFK+TL+DG+TLEF NVVPS+W FGQTFS
Sbjct: 189 VRGSRARSWVPLHRNWGANWQSSFDLRNQKLSFKLTLVDGKTLEFFNVVPSTWMFGQTFS 248

Query: 251 SMIQFS 257
           S  QFS
Sbjct: 249 SRSQFS 254

[Close]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match: B9SNN6_RICCO (Alpha-expansin 12, putative OS=Ricinus communis GN=RCOM_1010380 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.6e-112
Identity = 184/245 (75.10%), Postives = 216/245 (88.16%), Query Frame = 1 

Query: 15  LFFMVVGGSF---VHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVS 74
           L+FM V G+F   + G G  W +AHATFYGA+QNP++LGGACGYDNTFHAGFG++T A+S
Sbjct: 14  LYFMYVLGTFPEGIAGQGNGWTNAHATFYGANQNPSTLGGACGYDNTFHAGFGVHTTALS 73

Query: 75  GALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMS 134
           GALFR GEACGAC+ V+C+Y  DPKWCLR   V ITATNFCP NNNGGWCDPPR HFDMS
Sbjct: 74  GALFRNGEACGACYQVMCDYKADPKWCLRCGVVTITATNFCPPNNNGGWCDPPRHHFDMS 133

Query: 135 SPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWV 194
            PAFL IARQGNEGIVPVLY+RV+C+R+GGV FTLRGQSNFN+VM++NVGGSGD++AAWV
Sbjct: 134 MPAFLRIARQGNEGIVPVLYRRVACKRRGGVHFTLRGQSNFNLVMVTNVGGSGDIRAAWV 193

Query: 195 KGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 254
           +GSRTRTW+ MHRNWGANWQ+NVDLR+Q +SFK+TL+DG+TL+F NVVPS+WRFGQTFSS
Sbjct: 194 RGSRTRTWVAMHRNWGANWQSNVDLRSQTLSFKLTLVDGKTLQFFNVVPSTWRFGQTFSS 253

Query: 255 MIQFS 257
             QFS
Sbjct: 254 RNQFS 258

[Close]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match: E0CSM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02910 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.4e-110
Identity = 183/255 (71.76%), Postives = 218/255 (85.49%), Query Frame = 1 

Query: 2   VYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHA 61
           ++ +  F+W  + +  +V+ G   HG    W  AHATFYGA+Q+P++LGGACGYDNT HA
Sbjct: 4   IHFSSHFLWRFFFVVGVVLEG-IGHGLADGWFDAHATFYGANQSPSTLGGACGYDNTVHA 63

Query: 62  GFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWC 121
           GFG+NTAAVSGALFR GEACGAC+LV+CNY +DPKWCL R  V ITATNFCP NNNGGWC
Sbjct: 64  GFGVNTAAVSGALFRQGEACGACYLVMCNYWLDPKWCLHRATVTITATNFCPPNNNGGWC 123

Query: 122 DPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVG 181
           DPPR HFDMS PAFL +ARQGNEGIVPVLYKR+SC+R+GGV FTL+GQSNFNMVMISNVG
Sbjct: 124 DPPRQHFDMSMPAFLRMARQGNEGIVPVLYKRISCKRRGGVHFTLKGQSNFNMVMISNVG 183

Query: 182 GSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPS 241
           GSGDV+AAW++GSRT TW+ MHRNWGANWQ++VDLR+Q +SFK+TL+DG+TLEF NVVPS
Sbjct: 184 GSGDVRAAWIRGSRTGTWVAMHRNWGANWQSSVDLRSQNLSFKLTLVDGKTLEFYNVVPS 243

Query: 242 SWRFGQTFSSMIQFS 257
           +W FGQTF+S  QF+
Sbjct: 244 TWSFGQTFASENQFT 257

[Close]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match: M5WWD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015148mg PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.5e-110
Identity = 182/249 (73.09%), Postives = 214/249 (85.94%), Query Frame = 1 

Query: 10  WVLYALFFMVVGGSF-VHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTA 69
           W ++ L  MV+ G   V+ +   WL  HATFYG +Q+P +LGGACGYDNTFHAGFG+NTA
Sbjct: 17  WHIFLLVSMVLEGMIIVNVEASGWLSGHATFYGTNQDPATLGGACGYDNTFHAGFGVNTA 76

Query: 70  AVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHF 129
           AVS  LFRGGEACGAC+ V CNY +DPKWCL+RRAV +TATNFCP NNNGGWC+ P  HF
Sbjct: 77  AVSSTLFRGGEACGACYQVTCNYRIDPKWCLQRRAVTVTATNFCPPNNNGGWCNAPHQHF 136

Query: 130 DMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKA 189
           DMS+PAFL IARQGNEGIVPV+Y+RVSC+R+GGVRFTL+GQSNFNMVMISNVGGSGDVKA
Sbjct: 137 DMSTPAFLRIARQGNEGIVPVIYRRVSCQRRGGVRFTLKGQSNFNMVMISNVGGSGDVKA 196

Query: 190 AWVKGSRTR--TWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFG 249
           AW++GSR R  TW+PMHRNWGANWQ+++DLRNQ++SFK+TL+DGR+L F NVVPS+W FG
Sbjct: 197 AWIRGSRMRRGTWLPMHRNWGANWQSSIDLRNQKLSFKLTLVDGRSLVFSNVVPSTWSFG 256

Query: 250 QTFSSMIQF 256
           QTFSS  QF
Sbjct: 257 QTFSSRNQF 265

[Close]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match: AT3G15370.1 (AT3G15370.1 expansin 12)

HSP 1 Score: 347.4 bits (890), Expect = 7.3e-96
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 1 

Query: 32  WLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNY 91
           W+ AHAT+YG + +P SLGGACGYDN +HAGFG +TAA+SG LFR GE+CG C+ V C++
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDF 86

Query: 92  NVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLY 151
             DPKWCLR  AV +TATNFCP+NNN GWC+ PR HFDMSSPAF  IAR+GNEGIVPV Y
Sbjct: 87  PADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFY 146

Query: 152 KRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQ 211
           +RV C+R+GGVRFT+RGQ NFNMVMISNVGG G V++  V+GS+ +TW+ M RNWGANWQ
Sbjct: 147 RRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206

Query: 212 ANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 252
           ++ DLR QR+SFKVTL D +T  F+NVVPSSW FGQTFSS
Sbjct: 207 SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSS 246

[Close]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match: AT4G01630.1 (AT4G01630.1 expansin A17)

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-75
Identity = 126/250 (50.40%), Postives = 170/250 (68.00%), Query Frame = 1 

Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           +L A+ F  +    +      WL AHATFYG      ++GGACGY N +  G+  NTAA+
Sbjct: 7   LLVAMIFSTMFFMKISSVSAGWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAAL 66

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSN-----NNGGWCDPPR 130
           S ALF  G++CG C+ ++C+    P+WCL+ +++ ITATNFCP N     +NGGWC+PPR
Sbjct: 67  STALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPR 126

Query: 131 AHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGD 190
            HFDM+ PAFLTIA+    GIVP+LYK+V CRR GG+RFT+ G++ F +V+ISNV G G+
Sbjct: 127 PHFDMAQPAFLTIAKY-KAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGE 186

Query: 191 VKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRF 250
           +   W+KGS++  W  M RNWGAN+Q+N  L  Q +SFKV L DG     +NVVPS+WRF
Sbjct: 187 ISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRF 246

Query: 251 GQTFSSMIQF 256
           GQ+F S + F
Sbjct: 247 GQSFKSNVNF 255

[Close]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match: AT2G40610.1 (AT2G40610.1 expansin A8)

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-73
Identity = 127/229 (55.46%), Postives = 163/229 (71.18%), Query Frame = 1 

Query: 26  HGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACF 85
           HGD G W   HATFYG +    ++GGACGY N +  G+G NTAA+S ALF  G  CGAC+
Sbjct: 24  HGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACY 83

Query: 86  LVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFDMSSPAFLTIAR 145
            + CN   DP+WCL    + +TATNFCP     SN+NGGWC+PP  HFD++ PAFL IA 
Sbjct: 84  EMKCND--DPRWCLGS-TITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIA- 143

Query: 146 QGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWM 205
           Q   GIVPV ++RV C +KGG+RFT+ G S FN+V+ISNVGG+GDV A  +KGS+T++W 
Sbjct: 144 QYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQ 203

Query: 206 PMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 250
            M RNWG NWQ+N  + +Q +SF+VT  DGRTL   +V PS+W+FGQT+
Sbjct: 204 AMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248

[Close]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match: AT1G26770.2 (AT1G26770.2 expansin A10)

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-71
Identity = 130/243 (53.50%), Postives = 166/243 (68.31%), Query Frame = 1 

Query: 15  LFFMVVG--GSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSG 74
           L  ++VG   S V G GG W++AHATFYG      ++GGACGY N +  G+G +TAA+S 
Sbjct: 17  LVMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALST 76

Query: 75  ALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAH 134
           ALF  G +CG+CF + C    D KWCL   ++ +TATNFCP     +NNNGGWC+PP  H
Sbjct: 77  ALFNNGLSCGSCFEIRCEN--DGKWCL-PGSIVVTATNFCPPNNALANNNGGWCNPPLEH 136

Query: 135 FDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVK 194
           FD++ P F  IA Q   GIVPV Y+RV CRR+GG+RFT+ G S FN+V+I+NVGG+GDV 
Sbjct: 137 FDLAQPVFQRIA-QYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVH 196

Query: 195 AAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQ 251
           +A +KGSRT  W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+   N  P+ W +GQ
Sbjct: 197 SAAIKGSRT-VWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQ 254

[Close]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match: AT2G03090.1 (AT2G03090.1 expansin A15)

HSP 1 Score: 261.2 bits (666), Expect = 6.9e-70
Identity = 133/255 (52.16%), Postives = 165/255 (64.71%), Query Frame = 1 

Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M  G  G + +  ALF        VHG    W++AHATFYG      ++GGACGY N + 
Sbjct: 1   MFMGKMGLLGI--ALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SN 120
            G+G NTAA+S ALF  G +CGACF + C    D  WCL   A+ +TATNFCP      N
Sbjct: 61  QGYGTNTAALSTALFNNGLSCGACFEIKC--QSDGAWCL-PGAIIVTATNFCPPNNALPN 120

Query: 121 NNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMV 180
           N GGWC+PP  HFD+S P F  IA Q   G+VPV Y+RV C R+GG+RFT+ G S FN+V
Sbjct: 121 NAGGWCNPPLHHFDLSQPVFQRIA-QYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLV 180

Query: 181 MISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEF 240
           +++NVGG+GDV +  VKGSRTR W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+  
Sbjct: 181 LVTNVGGAGDVHSVAVKGSRTR-WQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVS 240

Query: 241 VNVVPSSWRFGQTFS 251
            N+ P+SW FGQTF+
Sbjct: 241 NNIAPASWSFGQTFT 248

[Close]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: gi|449431836|ref|XP_004133706.1| (PREDICTED: expansin-A12 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 1.9e-130
Identity = 225/259 (86.87%), Postives = 236/259 (91.12%), Query Frame = 1 

Query: 1   MVY-GNGGFVWVLYALFFMVVGGS--FVHGDGGAWLHAHATFYGADQNPTSLGGACGYDN 60
           M+Y  N GFVW +    FMV+G    FVHGD  +W  AHATFYGADQNPTSLGGACGYDN
Sbjct: 1   MIYENNNGFVWFI----FMVIGLGEFFVHGDN-SWFDAHATFYGADQNPTSLGGACGYDN 60

Query: 61  TFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNN 120
           TFHAGFGINTAAVSG LFR GEACGACFLVICNYN DPKWCLRRRAV +TATNFCPSNNN
Sbjct: 61  TFHAGFGINTAAVSGVLFRRGEACGACFLVICNYNADPKWCLRRRAVTVTATNFCPSNNN 120

Query: 121 GGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMI 180
           GGWCDPPR+HFDMSSPAFLTIARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVMI
Sbjct: 121 GGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVMI 180

Query: 181 SNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVN 240
           SNVGGSGDVKAAWVKGS+ R W PMHRNWGANWQANVDLRNQRMSFK+TL+DGRTLEFVN
Sbjct: 181 SNVGGSGDVKAAWVKGSKMRMWTPMHRNWGANWQANVDLRNQRMSFKLTLLDGRTLEFVN 240

Query: 241 VVPSSWRFGQTFSSMIQFS 257
           VVPSSWRFGQTFSSM+QFS
Sbjct: 241 VVPSSWRFGQTFSSMVQFS 254

[Close]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: gi|659102687|ref|XP_008452262.1| (PREDICTED: expansin-A12 [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 1.4e-128
Identity = 223/260 (85.77%), Postives = 237/260 (91.15%), Query Frame = 1 

Query: 1   MVYGNG--GFVWVLYALFFMVVG-GSF-VHGDGGAWLHAHATFYGADQNPTSLGGACGYD 60
           M+Y N   GFVW +    FMV+G G F VHGD  +W  AHATFYGADQNPTSLGGACGYD
Sbjct: 1   MIYENNSNGFVWFI----FMVIGLGKFLVHGDN-SWFDAHATFYGADQNPTSLGGACGYD 60

Query: 61  NTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNN 120
           NTFHAGFGINTAAVSG LFR GEACGACFLV+CNYN DPKWCLRRRAV +TATNFCPSNN
Sbjct: 61  NTFHAGFGINTAAVSGVLFRRGEACGACFLVMCNYNADPKWCLRRRAVTVTATNFCPSNN 120

Query: 121 NGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVM 180
           NGGWCDPPR+HFDMSSPAFLTIARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVM
Sbjct: 121 NGGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVM 180

Query: 181 ISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFV 240
           ISNVGGSGDVKAAWVKGS+ RTW PMHRNWGANWQANVDLRNQRMSFK++L DGR+LEFV
Sbjct: 181 ISNVGGSGDVKAAWVKGSKMRTWTPMHRNWGANWQANVDLRNQRMSFKLSLHDGRSLEFV 240

Query: 241 NVVPSSWRFGQTFSSMIQFS 257
           NV+PSSWRFGQTFSSM+QFS
Sbjct: 241 NVIPSSWRFGQTFSSMLQFS 255

[Close]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: gi|743898354|ref|XP_011042466.1| (PREDICTED: expansin-A12 [Populus euphratica])

HSP 1 Score: 419.1 bits (1076), Expect = 5.6e-114
Identity = 187/246 (76.02%), Postives = 213/246 (86.59%), Query Frame = 1 

Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           VL   F   V    + G  G WLHAHATFYGA+Q+P +LGGACGYDNTFHAGFG+NTAAV
Sbjct: 9   VLVCQFLFFVCLLSLKGINGGWLHAHATFYGANQSPATLGGACGYDNTFHAGFGVNTAAV 68

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDM 130
           SGALFRGGEACGAC+ ++CNY  DPKWCLRR  + +TATNFCP NNNGGWCDPPR HFDM
Sbjct: 69  SGALFRGGEACGACYQLMCNYRADPKWCLRRAVITVTATNFCPPNNNGGWCDPPRQHFDM 128

Query: 131 SSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAW 190
           S PAF  IARQGNEGIVPVLY+RVSC R+GGVRFTLRGQSNFN+VMISNVGGSGD+KAAW
Sbjct: 129 SMPAFFRIARQGNEGIVPVLYRRVSCTRRGGVRFTLRGQSNFNLVMISNVGGSGDIKAAW 188

Query: 191 VKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFS 250
           V+GS  R+W+P+HRNWGANWQ++ DLRNQ++SFK+TL+DG+TLEF NVVPS+WRFGQTFS
Sbjct: 189 VRGSGGRSWVPLHRNWGANWQSSFDLRNQKLSFKLTLVDGKTLEFFNVVPSTWRFGQTFS 248

Query: 251 SMIQFS 257
           S  QFS
Sbjct: 249 SRSQFS 254

[Close]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: gi|566154042|ref|XP_006370276.1| (hypothetical protein POPTR_0001s41210g [Populus trichocarpa])

HSP 1 Score: 417.5 bits (1072), Expect = 1.6e-113
Identity = 186/246 (75.61%), Postives = 213/246 (86.59%), Query Frame = 1 

Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           VL   F   V    + G  G WL+AHATFYGA+Q+P +LGGACGYDNTFHAGFG+NTAAV
Sbjct: 9   VLVCQFLFFVCLLSLKGINGGWLNAHATFYGANQSPATLGGACGYDNTFHAGFGVNTAAV 68

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDM 130
           SGALFRGGEACGAC+ ++CNY  DPKWCLRR  + +TATNFCP NNNGGWCDPPR HFDM
Sbjct: 69  SGALFRGGEACGACYQLMCNYRADPKWCLRRAVITVTATNFCPPNNNGGWCDPPRQHFDM 128

Query: 131 SSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAW 190
           S PAF  IARQGNEGIVPVLY+RVSC R+GGVRFTLRGQSNFN+VMISNVGGSGD+KAAW
Sbjct: 129 SMPAFFRIARQGNEGIVPVLYRRVSCTRRGGVRFTLRGQSNFNLVMISNVGGSGDIKAAW 188

Query: 191 VKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFS 250
           V+GSR R+W+P+HRNWGANWQ++ DLRNQ++SFK+TL+DG+TLEF NVVPS+W FGQTFS
Sbjct: 189 VRGSRARSWVPLHRNWGANWQSSFDLRNQKLSFKLTLVDGKTLEFFNVVPSTWMFGQTFS 248

Query: 251 SMIQFS 257
           S  QFS
Sbjct: 249 SRSQFS 254

[Close]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: gi|223533017|gb|EEF34781.1| (Alpha-expansin 12 precursor, putative [Ricinus communis])

HSP 1 Score: 413.7 bits (1062), Expect = 2.4e-112
Identity = 184/245 (75.10%), Postives = 216/245 (88.16%), Query Frame = 1 

Query: 15  LFFMVVGGSF---VHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVS 74
           L+FM V G+F   + G G  W +AHATFYGA+QNP++LGGACGYDNTFHAGFG++T A+S
Sbjct: 14  LYFMYVLGTFPEGIAGQGNGWTNAHATFYGANQNPSTLGGACGYDNTFHAGFGVHTTALS 73

Query: 75  GALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMS 134
           GALFR GEACGAC+ V+C+Y  DPKWCLR   V ITATNFCP NNNGGWCDPPR HFDMS
Sbjct: 74  GALFRNGEACGACYQVMCDYKADPKWCLRCGVVTITATNFCPPNNNGGWCDPPRHHFDMS 133

Query: 135 SPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWV 194
            PAFL IARQGNEGIVPVLY+RV+C+R+GGV FTLRGQSNFN+VM++NVGGSGD++AAWV
Sbjct: 134 MPAFLRIARQGNEGIVPVLYRRVACKRRGGVHFTLRGQSNFNLVMVTNVGGSGDIRAAWV 193

Query: 195 KGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 254
           +GSRTRTW+ MHRNWGANWQ+NVDLR+Q +SFK+TL+DG+TL+F NVVPS+WRFGQTFSS
Sbjct: 194 RGSRTRTWVAMHRNWGANWQSNVDLRSQTLSFKLTLVDGKTLQFFNVVPSTWRFGQTFSS 253

Query: 255 MIQFS 257
             QFS
Sbjct: 254 RNQFS 258

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXP12_ARATH1.3e-9469.09Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1[more]
EXP17_ARATH2.6e-7450.40Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1[more]
EXPA8_ARATH1.8e-7255.46Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1[more]
EXP10_ARATH6.5e-7053.50Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1[more]
EXP15_ORYSJ5.5e-6949.39Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2[more]
BLAST of Cp4.1LG01g08550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6M1_CUCSA1.3e-13086.87Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104900 PE=4 SV=1[more]
U5GTG3_POPTR1.1e-11375.61Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41210g PE=4 SV=1[more]
B9SNN6_RICCO1.6e-11275.10Alpha-expansin 12, putative OS=Ricinus communis GN=RCOM_1010380 PE=4 SV=1[more]
E0CSM2_VITVI3.4e-11071.76Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02910 PE=4 SV=... [more]
M5WWD9_PRUPE4.5e-11073.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015148mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g08550 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15370.17.3e-9669.09 expansin 12[more]
AT4G01630.11.4e-7550.40 expansin A17[more]
AT2G40610.11.0e-7355.46 expansin A8[more]
AT1G26770.23.7e-7153.50 expansin A10[more]
AT2G03090.16.9e-7052.16 expansin A15[more]
BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431836|ref|XP_004133706.1|1.9e-13086.87PREDICTED: expansin-A12 [Cucumis sativus][more]
gi|659102687|ref|XP_008452262.1|1.4e-12885.77PREDICTED: expansin-A12 [Cucumis melo][more]
gi|743898354|ref|XP_011042466.1|5.6e-11476.02PREDICTED: expansin-A12 [Populus euphratica][more]
gi|566154042|ref|XP_006370276.1|1.6e-11375.61hypothetical protein POPTR_0001s41210g [Populus trichocarpa][more]
gi|223533017|gb|EEF34781.1|2.4e-11275.10Alpha-expansin 12 precursor, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR007118Expan_Lol_pI
IPR007117Expansin_CBD
IPR007112Expansin/allergen_DPBB_dom
IPR002963Expansin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08550.1Cp4.1LG01g08550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 91..102
score: 1.9E-52coord: 160..172
score: 1.9E-52coord: 172..193
score: 1.9E-52coord: 104..114
score: 1.9E-52coord: 208..229
score: 1.9E-52coord: 62..76
score: 1.9E-52coord: 118..135
score: 1.9E-52coord: 237..253
score: 1.9
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 67..151
score: 3.6
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 50..161
score: 2
IPR007117Expansin, cellulose-binding-like domainGENE3DG3DSA:2.60.40.760coord: 156..255
score: 8.6
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 162..240
score: 8.8
IPR007117Expansin, cellulose-binding-like domainPROFILEPS50843EXPANSIN_CBDcoord: 171..251
score: 21
IPR007117Expansin, cellulose-binding-like domainunknownSSF49590PHL pollen allergencoord: 158..251
score: 6.41
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 31..46
score: 3.5E-37coord: 144..160
score: 3.5E-37coord: 71..89
score: 3.5E-37coord: 49..67
score: 3.5E-37coord: 237..251
score: 3.5E-37coord: 199..213
score: 3.5
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 17..155
score: 1.2
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 67..151
score: 1.7
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 11..179
score: 2.06
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 1..256
score: 2.0E
NoneNo IPR availablePANTHERPTHR31867:SF24EXPANSIN-A12coord: 1..256
score: 2.0E