Cp4.1LG01g08400 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCalcium ion binding protein
LocationCp4.1LG01 : 4966261 .. 4967968 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGTTGTCTTTACGATCTCTCCGGAGATCCTCACTCTCCACTCTCCCACCCTGCTCCATCCGATGGCTCTCAGTTAATCAGTTATCGACTTCTTCGTCTTCGTCGGTTTCTGCTTCAATTTCGGCTGACGATCGGTTTCGGATCCCTTCTTTTATTGGTTCCTTTCTCAAATTGACCTCAGGAATTTTGCTAGGATCTGGATTAGGGTTTCTTTATGCGTCTGGTAGTTCTGCTACTTCAGCACTTGCTCTTGCGGAGTCAACTGCTGTGGATAGTGTTGAAGATGGCGTTGTTGAGCAGCCGTGTTCGAATTCGTTTTTTAGGAAATTTTCTCTACCGGAAATCTCCTCCAAGTTTCTGTTTAAAGGTAAGAAATCATTCTTTCATTTCTTGGTTTTCTTGTTCTTTCGTCCGATAGGGGAGTAGAAATCATGAAGAGAGATTAGTGAATGCGTAAATATATATGTGATCGTAGTTGGAAAAAACGGAAATAAAATCGTATTTGTGTTGTTGACTCTTTGCTCCTTTCTACTTGGTGGTTGCAGAGGAGTTTCGTCGAAAGGTATTCTTCAATTACGAGAAACGTATTCGATTGTACAGCCCTCCGGAGAAGGTAGACTAGTTATTTTGTGAATTGTATTATTTCTCTTTTTTATTTTTTCTTTGACAGTCTCAGTAACTAACAGTGTGAAGCATATTATGATTCTTCTTTTCCGAAGTGAAGTGGTTTTTCTTTGCAACTAGTCACGATAGGTTGGGAATAACCTGCCTGTGCTTTCTGAACAAAATCGATTTTATGTAAGAACCTTTGAAAAAATTAATAATTTAAAATGTGTTTAGTATACTTGTTGAGTGATTTTAGGTGATCAAAACCACTAGGAGGGTCCAAATATGATTTTTAAAGTAGTAACTGAAAATTCTCCAAATATGTACCAAAAAATTAAAATATATTTATAATTAATAGAATCGTTTTTTAATATACTGCAATCAAACAATTTGTACTTAAAAATACTTGTGAAAATCTCTTAAGATCAAATAACATTTTGTTGAAAGATTTTTTATTTTTTTTTAATTTTTTTTTACAAGAAGTGTTCAAACTATAAGGTATTCCAAACTGAATCCTGAGCTGATTTTATTTGAACCATTGACAAATTCGCTCTTGAATTTAGTAATTAAAATTGGCGCCTACCTCAGAAGTGTTAGGCGACTGAAATGTTTGAGTTTGGGGATTGGATTGCAGAAATCAGTACAATGAGAGATCAAATTGGTTTCCGGGCGTTCTGGAAACCTTTAATGTCACAACATATATCGTTGTCTGTTATCTTTAAGTTTTGATGCTTTTCAACAATGTAAATTTCACATGCTCCTTGAGTTTCAGTTGTTCTAAGTTCCTAACTTCTAATAATTTGATTCGTTAGGTTGTTTAAAAGTTTGCTATATTTGACATATTTTCTTGCCATCTCATTTCCTGAAGGTCTTTGAGTATTTTGCATCATTTCGTGCGCCAGATGGAGAATTACTCATGAGACCAATGGATCTAATGCGGGCTGTGATTCCTGTCTTTCCACCTTCCGAGTCGCATCTGGTAAGAGATGGATATTTAAGTGGGGAAAGGAACCCTGGGATGCTTCGTTGTGCCCCTTCGGATTTGCTCATGCTTTTTGATATAAACAATGATGGGCTTGTTTCTTTCAAAGAGTGA

mRNA sequence

ATGGCTATGTTGTCTTTACGATCTCTCCGGAGATCCTCACTCTCCACTCTCCCACCCTGCTCCATCCGATGGCTCTCAGTTAATCAGTTATCGACTTCTTCGTCTTCGTCGGTTTCTGCTTCAATTTCGGCTGACGATCGGTTTCGGATCCCTTCTTTTATTGGTTCCTTTCTCAAATTGACCTCAGGAATTTTGCTAGGATCTGGATTAGGGTTTCTTTATGCGTCTGGTAGTTCTGCTACTTCAGCACTTGCTCTTGCGGAGTCAACTGCTGTGGATAGTGTTGAAGATGGCGTTGTTGAGCAGCCGTGTTCGAATTCGTTTTTTAGGAAATTTTCTCTACCGGAAATCTCCTCCAAGTTTCTGTTTAAAGAGGAGTTTCGTCGAAAGGTATTCTTCAATTACGAGAAACGTATTCGATTGTACAGCCCTCCGGAGAAGGTCTTTGAGTATTTTGCATCATTTCGTGCGCCAGATGGAGAATTACTCATGAGACCAATGGATCTAATGCGGGCTGTGATTCCTGTCTTTCCACCTTCCGAGTCGCATCTGGTAAGAGATGGATATTTAAGTGGGGAAAGGAACCCTGGGATGCTTCGTTGTGCCCCTTCGGATTTGCTCATGCTTTTTGATATAAACAATGATGGGCTTGTTTCTTTCAAAGAGTGA

Coding sequence (CDS)

ATGGCTATGTTGTCTTTACGATCTCTCCGGAGATCCTCACTCTCCACTCTCCCACCCTGCTCCATCCGATGGCTCTCAGTTAATCAGTTATCGACTTCTTCGTCTTCGTCGGTTTCTGCTTCAATTTCGGCTGACGATCGGTTTCGGATCCCTTCTTTTATTGGTTCCTTTCTCAAATTGACCTCAGGAATTTTGCTAGGATCTGGATTAGGGTTTCTTTATGCGTCTGGTAGTTCTGCTACTTCAGCACTTGCTCTTGCGGAGTCAACTGCTGTGGATAGTGTTGAAGATGGCGTTGTTGAGCAGCCGTGTTCGAATTCGTTTTTTAGGAAATTTTCTCTACCGGAAATCTCCTCCAAGTTTCTGTTTAAAGAGGAGTTTCGTCGAAAGGTATTCTTCAATTACGAGAAACGTATTCGATTGTACAGCCCTCCGGAGAAGGTCTTTGAGTATTTTGCATCATTTCGTGCGCCAGATGGAGAATTACTCATGAGACCAATGGATCTAATGCGGGCTGTGATTCCTGTCTTTCCACCTTCCGAGTCGCATCTGGTAAGAGATGGATATTTAAGTGGGGAAAGGAACCCTGGGATGCTTCGTTGTGCCCCTTCGGATTTGCTCATGCTTTTTGATATAAACAATGATGGGCTTGTTTCTTTCAAAGAGTGA

Protein sequence

MAMLSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTSGILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE
Homology
[Close]
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match: E5GCC4_CUCME (Calcium ion binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.8e-82
Identity = 174/219 (79.45%), Postives = 181/219 (82.65%), Query Frame = 1 

Query: 4   LSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTSG 63
           LSLRSLRRSS S     SIRWLSVNQ   SSSSS S S S  DR     +I SFLK +SG
Sbjct: 3   LSLRSLRRSSPSIPSLYSIRWLSVNQ---SSSSSASPSTSDGDRL----WISSFLKWSSG 62

Query: 64  ILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFLF 123
           ILL SGLGF Y S +SAT ALA A+ST VDS ED VV+ P S SFFRKFSLPEIS+KFLF
Sbjct: 63  ILLASGLGFFYVSATSATPALAFADSTVVDSAEDAVVKHPRSTSFFRKFSLPEISTKFLF 122

Query: 124 KEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSESH 183
            EEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDG+LLM PMDLMRAVIPVFPPSESH
Sbjct: 123 GEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGDLLMTPMDLMRAVIPVFPPSESH 182

Query: 184 LVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           LVRDGYL GERNPG LRCAPSDLLMLFDINNDG VSFKE
Sbjct: 183 LVRDGYLCGERNPGELRCAPSDLLMLFDINNDGHVSFKE 214

[Close]
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match: A0A0A0L4E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652790 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-79
Identity = 171/219 (78.08%), Postives = 179/219 (81.74%), Query Frame = 1 

Query: 4   LSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTSG 63
           L LRSLRRSS S     SIRWLSVNQ   SSSSS S S S  DR     +I SFLK +SG
Sbjct: 3   LPLRSLRRSSPSIPSLYSIRWLSVNQ---SSSSSASPSTSDADRL----WISSFLKWSSG 62

Query: 64  ILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFLF 123
           ILL SGLGF+  S +SAT  LA A+S  VDS ED VVE P S+SFFRKFSLPEISSKFLF
Sbjct: 63  ILLASGLGFVCVSANSATPTLAFADSAVVDSAEDAVVEHPRSSSFFRKFSLPEISSKFLF 122

Query: 124 KEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSESH 183
            EEFRRKVFFNYEKRIRLYSPPEKV+EYFASFRAPDGELLM PMDLMRAVIPVFPPSESH
Sbjct: 123 GEEFRRKVFFNYEKRIRLYSPPEKVYEYFASFRAPDGELLMTPMDLMRAVIPVFPPSESH 182

Query: 184 LVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           LVRDGYL GERNPG LRCAPS+LLMLFDINNDG VSFKE
Sbjct: 183 LVRDGYLCGERNPGELRCAPSNLLMLFDINNDGHVSFKE 214

[Close]
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match: M5XY43_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000461mg PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50
Identity = 128/222 (57.66%), Postives = 151/222 (68.02%), Query Frame = 1 

Query: 3   MLSLRSLRRSSLSTLPPCSIRWLSV--NQLSTSSSSSVSASISADDRFRIPSFIGSFLKL 62
           M  L+ L RS+ S     SIR LS      S+S SS ++AS    +  + PS+ GSFLK 
Sbjct: 1   MSRLQYLTRSTPSIHQRFSIRHLSTAPQPSSSSLSSLITASSFDSNPHQNPSY-GSFLKW 60

Query: 63  TSGILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSK 122
            SG  +GSGLG LY   SS  S L  A+ + V  V    +E   S+S F+K SLPEI++ 
Sbjct: 61  ISGFAMGSGLGLLY--WSSPDSVLTFADWSTV--VPGETLEDQPSSSLFQKLSLPEITA- 120

Query: 123 FLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPS 182
                  RRK+FFNYEKRIRL SPPEKVFEYFAS   P+GELLMRP DLMRAV+PVFPPS
Sbjct: 121 -------RRKIFFNYEKRIRLRSPPEKVFEYFASSSTPEGELLMRPEDLMRAVVPVFPPS 180

Query: 183 ESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           ESHLVRDGYL GERNPG LRC+PS+  MLFD+NNDG +SFKE
Sbjct: 181 ESHLVRDGYLRGERNPGDLRCSPSEFFMLFDVNNDGHISFKE 209

[Close]
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match: M4D4B5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 125/230 (54.35%), Postives = 160/230 (69.57%), Query Frame = 1 

Query: 2   AMLSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLT 61
           A+ SL S+ RS      P   R   ++ L++S   S S S +  +R  +P   GS  K  
Sbjct: 9   ALSSLPSVSRSL-----PLIQRLRKIHGLASSFPESSSPSPAPSNR-AVPG--GSLAKWI 68

Query: 62  SGILLGSGLGFLY-ASGSSATSAL-------ALAESTAVDSVEDGVVE-QPCSNSFFRKF 121
           SGI  GSGLGFLY +S S +TS L       +LA+S++  SV DG ++ +  S SF  K 
Sbjct: 69  SGIAAGSGLGFLYWSSDSDSTSGLFGGINLFSLADSSST-SVSDGDLKPRSRSRSFIPKL 128

Query: 122 SLPEISSKFLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRA 181
           +LP  SS+F+F + +RRK+FFNYEKR+RL SPPEKVFEYFAS R   GELLM+P DLMRA
Sbjct: 129 ALPGYSSRFIFGDAYRRKIFFNYEKRLRLQSPPEKVFEYFASVRTSKGELLMKPADLMRA 188

Query: 182 VIPVFPPSESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           ++PVFPPSESHLVR+GYL+GERNPG LRC+PS+  MLFD++NDGL+SFKE
Sbjct: 189 IVPVFPPSESHLVREGYLTGERNPGELRCSPSEFFMLFDVDNDGLISFKE 229

[Close]
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match: A0A061GQJ6_THECC (Calcium ion binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_036957 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.5e-50
Identity = 133/235 (56.60%), Postives = 157/235 (66.81%), Query Frame = 1 

Query: 3   MLSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSV----SASISADDRFRIPSFIGSFL 62
           M SL +LRRSS    P     +L   +L T   SS+    ++ I +DDR    S   SF+
Sbjct: 1   MSSLTALRRSS----PSADRLFLIQQRLRTCQFSSLPPINASKIDSDDRK--DSVASSFV 60

Query: 63  KLTSGILLGSGLGFLY---ASGSSATSAL------ALAE-STAV-DSVEDGVVEQPCSNS 122
           K  SGI +GS LG +Y    SGS   SA       + AE STA  +S  DG      S +
Sbjct: 61  KWISGIAVGSSLGLVYWYSTSGSDWRSAFLKKPFWSFAEWSTATAESTVDG------SRN 120

Query: 123 FFRKFSLPEISSKFLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPM 182
            FRK +LP+ SSKF+F E  RRKVFFNYEKR+RL SPPEKVF YFASFR P+GELLMRP 
Sbjct: 121 AFRKLALPDYSSKFIFGEVHRRKVFFNYEKRLRLRSPPEKVFVYFASFRTPEGELLMRPA 180

Query: 183 DLMRAVIPVFPPSESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           DLMRAV+PVFPPSES+LVRDGYLSGER+PG LRC PS+  MLFD N+DGL+SFKE
Sbjct: 181 DLMRAVVPVFPPSESNLVRDGYLSGERSPGELRCDPSEFFMLFDTNSDGLISFKE 223

[Close]
BLAST of Cp4.1LG01g08400 vs. TAIR10
Match: AT4G32060.1 (AT4G32060.1 calcium-binding EF hand family protein)

HSP 1 Score: 200.7 bits (509), Expect = 9.6e-52
Identity = 119/225 (52.89%), Postives = 146/225 (64.89%), Query Frame = 1 

Query: 13  SLSTLPPCSIRWLSVNQL---STSSS---SSVSASI-SADDRFRIPSFIGSFLKLTSGIL 72
           S+S+LP     +L + +L    +SSS   SS SASI S  D  +     GS  K  +GI 
Sbjct: 9   SVSSLPSVDRSFLLIQRLRIHGSSSSFPESSPSASILSGADPLKCTVSGGSLAKWITGIS 68

Query: 73  LGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCS--------NSFFRKFSLPEI 132
            GS LGFLY S  S+ S   L   + + S  D      C          SF  K SLP  
Sbjct: 69  AGSALGFLYWSSGSSDSISGLFGGSNLLSFADSSTPSVCGVKVGDLKPRSFIPKLSLPGY 128

Query: 133 SSKFLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVF 192
           SS F+F + +RRK+FFNYEKR+RL SPPEKVFEYFAS R   GE+LM+P DLMRA++PVF
Sbjct: 129 SSGFIFGDAYRRKIFFNYEKRLRLQSPPEKVFEYFASVRTDKGEILMKPADLMRAIVPVF 188

Query: 193 PPSESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           PPSESHLVR+GYL+GERNPG LRC+PS+  MLFD++NDGL+SFKE
Sbjct: 189 PPSESHLVREGYLTGERNPGELRCSPSEFFMLFDVDNDGLISFKE 233

[Close]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match: gi|659104321|ref|XP_008452897.1| (PREDICTED: calcium uptake protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 8.4e-82
Identity = 174/219 (79.45%), Postives = 181/219 (82.65%), Query Frame = 1 

Query: 4   LSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTSG 63
           LSLRSLRRSS S     SIRWLSVNQ   SSSSS S S S  DR     +I SFLK +SG
Sbjct: 3   LSLRSLRRSSPSIPSLYSIRWLSVNQ---SSSSSASPSTSDGDRL----WISSFLKWSSG 62

Query: 64  ILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFLF 123
           ILL SGLGF Y S +SAT ALA A+ST VDS ED VV+ P S SFFRKFSLPEIS+KFLF
Sbjct: 63  ILLASGLGFFYVSATSATPALAFADSTVVDSAEDAVVKHPRSTSFFRKFSLPEISTKFLF 122

Query: 124 KEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSESH 183
            EEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDG+LLM PMDLMRAVIPVFPPSESH
Sbjct: 123 GEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGDLLMTPMDLMRAVIPVFPPSESH 182

Query: 184 LVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           LVRDGYL GERNPG LRCAPSDLLMLFDINNDG VSFKE
Sbjct: 183 LVRDGYLCGERNPGELRCAPSDLLMLFDINNDGHVSFKE 214

[Close]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match: gi|449455563|ref|XP_004145522.1| (PREDICTED: calcium uptake protein 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79
Identity = 171/219 (78.08%), Postives = 179/219 (81.74%), Query Frame = 1 

Query: 4   LSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTSG 63
           L LRSLRRSS S     SIRWLSVNQ   SSSSS S S S  DR     +I SFLK +SG
Sbjct: 3   LPLRSLRRSSPSIPSLYSIRWLSVNQ---SSSSSASPSTSDADRL----WISSFLKWSSG 62

Query: 64  ILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFLF 123
           ILL SGLGF+  S +SAT  LA A+S  VDS ED VVE P S+SFFRKFSLPEISSKFLF
Sbjct: 63  ILLASGLGFVCVSANSATPTLAFADSAVVDSAEDAVVEHPRSSSFFRKFSLPEISSKFLF 122

Query: 124 KEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSESH 183
            EEFRRKVFFNYEKRIRLYSPPEKV+EYFASFRAPDGELLM PMDLMRAVIPVFPPSESH
Sbjct: 123 GEEFRRKVFFNYEKRIRLYSPPEKVYEYFASFRAPDGELLMTPMDLMRAVIPVFPPSESH 182

Query: 184 LVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           LVRDGYL GERNPG LRCAPS+LLMLFDINNDG VSFKE
Sbjct: 183 LVRDGYLCGERNPGELRCAPSNLLMLFDINNDGHVSFKE 214

[Close]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match: gi|645225353|ref|XP_008219541.1| (PREDICTED: calcium uptake protein 1, mitochondrial [Prunus mume])

HSP 1 Score: 229.2 bits (583), Expect = 7.2e-57
Identity = 131/220 (59.55%), Postives = 159/220 (72.27%), Query Frame = 1 

Query: 10  RRSSLSTLPPCSIRWLSVNQLSTS---SSSSVSASISAD----DRFRIPSFIGSFLKLTS 69
           R  SL+   P   +W S+  LST+   SSSS+S+ I+A     +R + PS+ GSFLK  S
Sbjct: 3   RLQSLTRSTPSIHQWFSIRHLSTAPQPSSSSLSSLITASSFDSNRHQNPSY-GSFLKWIS 62

Query: 70  GILLGSGLGFLYASGSSATSALALAESTAVDSVEDGVVEQPCSNSFFRKFSLPEISSKFL 129
           G  +GSGLG LY   SS  S L  A+ + V  V    +E   S+S F+K SLPEI+++FL
Sbjct: 63  GFAMGSGLGLLY--WSSPDSVLTFADWSTV--VPGETLEDQPSSSLFQKLSLPEITARFL 122

Query: 130 FKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPSES 189
           F + +RRK+FFNYEKRIRL SPPEKVFEYFAS   P+GELLMRP DLMRAV+PVFPPSES
Sbjct: 123 FGDAYRRKIFFNYEKRIRLRSPPEKVFEYFASSSTPEGELLMRPEDLMRAVVPVFPPSES 182

Query: 190 HLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           HLVRDGYL GERNPG LRC+PS+  MLFD+NNDG +SFKE
Sbjct: 183 HLVRDGYLRGERNPGDLRCSPSEFFMLFDVNNDGHISFKE 217

[Close]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match: gi|1009137006|ref|XP_015885824.1| (PREDICTED: calcium uptake protein 1, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 5.7e-54
Identity = 133/235 (56.60%), Postives = 159/235 (67.66%), Query Frame = 1 

Query: 1   MAMLSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSS---VSASISADDRFRIPSFIGSF 60
           M+ L   S+RRS+ S     SI+ +          SS   V+AS    +R + P+  GSF
Sbjct: 1   MSSLRSSSIRRSTPSINQLASIQLVQFRHFHAPLPSSLPPVTASSLGPNRPQSPAS-GSF 60

Query: 61  LKLTSGILLGSGLGFLYASGSSATS----------ALALAESTAVDSVEDGVVEQPCSNS 120
           LK  SGI +GSGLG LY S SS+ S           L+ A+S+     E  VV+   SNS
Sbjct: 61  LKWISGIAVGSGLGLLYWSDSSSKSDFNSGFFNKSLLSFADSSTPTG-EATVVDVWRSNS 120

Query: 121 FFRKFSLPEISSKFLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPM 180
            FRK SLP+   KFLF +E+RRK+FFNYEKRIRL SPPEKVFEYFASFR P+GELLM+P 
Sbjct: 121 LFRKLSLPDSGPKFLFGDEYRRKIFFNYEKRIRLRSPPEKVFEYFASFRTPEGELLMKPA 180

Query: 181 DLMRAVIPVFPPSESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           DLMRAV+PVFPPSESHLVRDGYL GER+PG LRCAPS+  MLFD+N DG +SFKE
Sbjct: 181 DLMRAVVPVFPPSESHLVRDGYLIGERSPGELRCAPSEFFMLFDVNKDGHISFKE 233

[Close]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match: gi|694330152|ref|XP_009355791.1| (PREDICTED: calcium uptake protein 1 homolog, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 209.5 bits (532), Expect = 5.9e-51
Identity = 127/222 (57.21%), Postives = 151/222 (68.02%), Query Frame = 1 

Query: 3   MLSLRSLRRSSLSTLPPCSIRWLSVNQLSTSSSSSVSASISADDRFRIPSFIGSFLKLTS 62
           M  LRSL RS+ S      +R LS +   +S  S ++AS    +  + P F GS+LK  S
Sbjct: 1   MSRLRSLIRSTPSIHKRLPVRHLSASPQPSSPLSLIAASNFESNPPQNP-FHGSYLKWIS 60

Query: 63  GILLGSGLGFLYASGSSATSALALAESTAV-DSVEDGV-VEQPCSNSFFRKFSLPEISSK 122
           G  +GSG+G LY   SS  S L    S A   + E G+ VE   S SF RK SLPEI   
Sbjct: 61  GFAVGSGVGLLY--WSSPDSDLFKTSSFADWSTAESGLAVEDRPSRSFLRKLSLPEIGPG 120

Query: 123 FLFKEEFRRKVFFNYEKRIRLYSPPEKVFEYFASFRAPDGELLMRPMDLMRAVIPVFPPS 182
           FLF + +RRK+FFNYEKR+RLYSPPEKVFEYFAS    DGELLM P DLMRA++PVFPPS
Sbjct: 121 FLFGDAYRRKIFFNYEKRMRLYSPPEKVFEYFASSSTADGELLMTPGDLMRAIVPVFPPS 180

Query: 183 ESHLVRDGYLSGERNPGMLRCAPSDLLMLFDINNDGLVSFKE 223
           ES+LVRDGYL GERNPG LRC+PS+  MLFD+NNDG +SFKE
Sbjct: 181 ESNLVRDGYLKGERNPGDLRCSPSEFFMLFDVNNDGHISFKE 219

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g08400 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCC4_CUCME5.8e-8279.45Calcium ion binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L4E8_CUCSA1.2e-7978.08Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652790 PE=4 SV=1[more]
M5XY43_PRUPE1.6e-5057.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000461mg PE=4 SV=1[more]
M4D4B5_BRARP3.5e-5054.35Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A061GQJ6_THECC4.5e-5056.60Calcium ion binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_036957... [more]
BLAST of Cp4.1LG01g08400 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32060.19.6e-5252.89 calcium-binding EF hand family protein[more]
BLAST of Cp4.1LG01g08400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659104321|ref|XP_008452897.1|8.4e-8279.45PREDICTED: calcium uptake protein 1, mitochondrial [Cucumis melo][more]
gi|449455563|ref|XP_004145522.1|1.8e-7978.08PREDICTED: calcium uptake protein 1, mitochondrial [Cucumis sativus][more]
gi|645225353|ref|XP_008219541.1|7.2e-5759.55PREDICTED: calcium uptake protein 1, mitochondrial [Prunus mume][more]
gi|1009137006|ref|XP_015885824.1|5.7e-5456.60PREDICTED: calcium uptake protein 1, mitochondrial-like [Ziziphus jujuba][more]
gi|694330152|ref|XP_009355791.1|5.9e-5157.21PREDICTED: calcium uptake protein 1 homolog, mitochondrial [Pyrus x bretschneide... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08400.1Cp4.1LG01g08400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 205..222
score: 8
NoneNo IPR availablePANTHERPTHR12294EF HAND DOMAIN FAMILY A1,A2-RELATEDcoord: 122..222
score: 2.7
NoneNo IPR availablePANTHERPTHR12294:SF12SUBFAMILY NOT NAMEDcoord: 122..222
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g08400CmaCh04G009240Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g08400CmoCh04G009940Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g08400Carg00041Silver-seed gourdcarcpeB0938
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g08400Cucumber (Gy14) v1cgycpeB0119
Cp4.1LG01g08400Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g08400Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g08400Wild cucumber (PI 183967)cpecpiB392
Cp4.1LG01g08400Cucumber (Chinese Long) v2cpecuB393
Cp4.1LG01g08400Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g08400Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g08400Melon (DHL92) v3.5.1cpemeB409
Cp4.1LG01g08400Cucumber (Gy14) v2cgybcpeB369
Cp4.1LG01g08400Melon (DHL92) v3.6.1cpemedB482
Cp4.1LG01g08400Cucumber (Chinese Long) v3cpecucB0491