Cp4.1LG01g08390 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSolute carrier family 22 member 15-like
LocationCp4.1LG01 : 4968442 .. 4969179 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCATTGCCAAAGCGAATGGAAACCACCTCCCTGAAGGGGTCTTTCTGGCCATTGACGAAGATACAAAACAGAGCTCGAAACAGGACCAAATCCAGCAGACTACCCAATCGGGGTCTCTCCTCGACGTGATGCGCTCGCCCATTACTCGAATTCGGTTGATTCTGGCGGTGGCGATTAATTTCATGTGCGCCGTCGTGTACTACGGGTTGAGCCTGAATGTGGTGAATCTCGACACCAATATTTACCTGACCGTGGCGCTGAACGCAGTGGCGGAAATGCCGGCTTTCCTGATCACGGCATTGCTGTTGGACGTGTGTGGGCGGAAGCCGTTGGCGATTGGGACGCTGTGGTTCAGTGGGGTGTTCTGTTTATGTGGGAGTTTGATGAAGGGGGTGGGGATGTGGAAGATTGTGAGGATGGTGTGTGGGATGTTGGGGATATTTGGAATGGCGGGGACTTACAATTTGTTGTATATTTATACGGCAGAGCTGTTTCCAACGGTGGTGAGGAACGCGGCGTTGGGGTGTGGGACGCAGGCGTCGCAGATGGGGGCGATATTAGCGCCGTTTGTGGTGGTGATGGGGGGAGGGCTGCCGTTTGCTGTGTTTGCAGGGTGTGGAATTATGGGTGGGGCTCTGGCGTTTTACTTGCCCGAGACGCTGAATAAGCCTTTGTATGATACGATGGGCGGCATAGAAGATGGGGAAAAAGATTGTTTGAACAATGCCTGA

mRNA sequence

ATGGCTGCCATTGCCAAAGCGAATGGAAACCACCTCCCTGAAGGGGTCTTTCTGGCCATTGACGAAGATACAAAACAGAGCTCGAAACAGGACCAAATCCAGCAGACTACCCAATCGGGGTCTCTCCTCGACGTGATGCGCTCGCCCATTACTCGAATTCGGTTGATTCTGGCGGTGGCGATTAATTTCATGTGCGCCGTCGTGTACTACGGGTTGAGCCTGAATGTGGTGAATCTCGACACCAATATTTACCTGACCGTGGCGCTGAACGCAGTGGCGGAAATGCCGGCTTTCCTGATCACGGCATTGCTGTTGGACGTGTGTGGGCGGAAGCCGTTGGCGATTGGGACGCTGTGGTTCAGTGGGGTGTTCTGTTTATGTGGGAGTTTGATGAAGGGGGTGGGGATGTGGAAGATTGTGAGGATGGTGTGTGGGATGTTGGGGATATTTGGAATGGCGGGGACTTACAATTTGTTGTATATTTATACGGCAGAGCTGTTTCCAACGGTGGTGAGGAACGCGGCGTTGGGGTGTGGGACGCAGGCGTCGCAGATGGGGGCGATATTAGCGCCGTTTGTGGTGGTGATGGGGGGAGGGCTGCCGTTTGCTGTGTTTGCAGGGTGTGGAATTATGGGTGGGGCTCTGGCGTTTTACTTGCCCGAGACGCTGAATAAGCCTTTGTATGATACGATGGGCGGCATAGAAGATGGGGAAAAAGATTGTTTGAACAATGCCTGA

Coding sequence (CDS)

ATGGCTGCCATTGCCAAAGCGAATGGAAACCACCTCCCTGAAGGGGTCTTTCTGGCCATTGACGAAGATACAAAACAGAGCTCGAAACAGGACCAAATCCAGCAGACTACCCAATCGGGGTCTCTCCTCGACGTGATGCGCTCGCCCATTACTCGAATTCGGTTGATTCTGGCGGTGGCGATTAATTTCATGTGCGCCGTCGTGTACTACGGGTTGAGCCTGAATGTGGTGAATCTCGACACCAATATTTACCTGACCGTGGCGCTGAACGCAGTGGCGGAAATGCCGGCTTTCCTGATCACGGCATTGCTGTTGGACGTGTGTGGGCGGAAGCCGTTGGCGATTGGGACGCTGTGGTTCAGTGGGGTGTTCTGTTTATGTGGGAGTTTGATGAAGGGGGTGGGGATGTGGAAGATTGTGAGGATGGTGTGTGGGATGTTGGGGATATTTGGAATGGCGGGGACTTACAATTTGTTGTATATTTATACGGCAGAGCTGTTTCCAACGGTGGTGAGGAACGCGGCGTTGGGGTGTGGGACGCAGGCGTCGCAGATGGGGGCGATATTAGCGCCGTTTGTGGTGGTGATGGGGGGAGGGCTGCCGTTTGCTGTGTTTGCAGGGTGTGGAATTATGGGTGGGGCTCTGGCGTTTTACTTGCCCGAGACGCTGAATAAGCCTTTGTATGATACGATGGGCGGCATAGAAGATGGGGAAAAAGATTGTTTGAACAATGCCTGA

Protein sequence

MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKDCLNNA
Homology
[Close]
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match: OCT4_ARATH (Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana GN=OCT4 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-81
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVA 60
           M +IAK NG H+P GV LA+D+D + ++ +   + T   GSL DV+ SP+ R+RL+++VA
Sbjct: 280 MHSIAKTNGRHIPAGVTLALDDDVENNNGE---RNTAVEGSLKDVILSPLMRMRLVISVA 339

Query: 61  INFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF 120
           I+F  ++VYYGLSLNV NL TN+YL V +NAV+EMPAF ITA+LLD  GRKPL+IGT WF
Sbjct: 340 ISFTVSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWF 399

Query: 121 SGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGT 180
           S VFCL G  + G G WK VRMV G+LGIFGMAGTYNLL+IY AELFPTVVRNAALGC T
Sbjct: 400 SCVFCLVGFSVWGAGPWKSVRMVSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCAT 459

Query: 181 QASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKD 240
           QA+QMGAILAPFVVV+G  LPF VFA CG++GG LAFYLPETLNKPLYDTM G+ + E +
Sbjct: 460 QAAQMGAILAPFVVVLGEELPFGVFAVCGLVGGGLAFYLPETLNKPLYDTMFGMHEAESE 516

[Close]
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match: S22AF_XENLA (Solute carrier family 22 member 15 OS=Xenopus laevis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 4.2e-26
Identity = 72/211 (34.12%), Postives = 128/211 (60.66%), Query Frame = 1 

Query: 34  QQTTQSGSLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVA 93
           + +T S +++ +  + I R R ++ + + F+C++VYYGL+L+  +L  +IYL +AL+ +A
Sbjct: 276 KDSTHSANIITIYSNSILRHRTLVMMWVWFVCSLVYYGLTLSSGDLGGDIYLNLALSGLA 335

Query: 94  EMPAFLITALLLD--VCGRKPLAIGTLWFSGVFCLCGSLM---KGVGMWKIVR-MVCGML 153
           E+PA+ +   L++    GR+    G L+  G  CL   L+   +G G   ++      +L
Sbjct: 336 ELPAYPLCMYLINHKRVGRRRSLAGFLFLGGGSCLLIMLVPVKEGSGPLSVLNSQTLSLL 395

Query: 154 GIFGMAGTYNLLYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVMGG---GLPFAV 213
           G   ++ ++N++YIY++EL+PT VRN  +G  +  S++G I+APF+  +      LPF V
Sbjct: 396 GKLNISASFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRSVHWALPFIV 455

Query: 214 FAGCGIMGGALAFYLPETLNKPLYDTMGGIE 236
           F   G+  G L+ +LPETLN PL +T+G ++
Sbjct: 456 FGAAGVSAGLLSLFLPETLNVPLPETLGDLQ 486

[Close]
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match: S22FL_XENLA (Solute carrier family 22 member 15-like OS=Xenopus laevis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.2e-26
Identity = 74/200 (37.00%), Postives = 113/200 (56.50%), Query Frame = 1 

Query: 41  SLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLI 100
           S+ D+++  + R R IL + I ++C++VYYGL+LN   L  N+YL VAL  + E+PAF +
Sbjct: 271 SVFDLVKYGVLRWRTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPL 330

Query: 101 TALLLDVC--GRKPLAIGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNL 160
               ++    GR+    G L F+G  C+    +       I   V  + G   ++  +N+
Sbjct: 331 CLYFIEKSWSGRRRATAGFLVFAGFACIFTIFVPETNGDFINPTVLALFGKLSVSAAFNV 390

Query: 161 LYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVM---GGGLPFAVFAGCGIMGGAL 220
           +YIYT+EL+PTVVRNA LG    A + G IL+PF+  M      +PF  F   GI  G L
Sbjct: 391 VYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPAMKSFNPSMPFVAFGISGISAGIL 450

Query: 221 AFYLPETLNKPLYDTMGGIE 236
           +  LPET NKP+ +T+  ++
Sbjct: 451 SLLLPETRNKPIAETIEDLQ 470

[Close]
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match: S22FL_XENTR (Solute carrier family 22 member 15-like OS=Xenopus tropicalis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 72/200 (36.00%), Postives = 113/200 (56.50%), Query Frame = 1 

Query: 41  SLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLI 100
           S+ D+++  + R R IL + I ++C++VYYGL+LN   L  N+YL VAL  + E+PAF +
Sbjct: 271 SVFDLVKYGVLRWRTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPL 330

Query: 101 TALLLDVC--GRKPLAIGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNL 160
               ++    GR+    G L F+G  C+    +       +   V  + G   ++  +N+
Sbjct: 331 CLYFIEKSWSGRRKATAGFLGFAGFACIFTIFLPETNGDLLNPTVLALFGKLSVSAAFNV 390

Query: 161 LYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVM---GGGLPFAVFAGCGIMGGAL 220
           +YIYT+EL+PTVVRNA LG    A + G IL+PF+  M      +PF  F   GI  G L
Sbjct: 391 VYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPTMKSLNPSMPFVAFGISGISAGIL 450

Query: 221 AFYLPETLNKPLYDTMGGIE 236
           +  LPET NKP+ +++  ++
Sbjct: 451 SLLLPETRNKPIAESIEDLQ 470

[Close]
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match: OCT1_ARATH (Organic cation/carnitine transporter 1 OS=Arabidopsis thaliana GN=OCT1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-25
Identity = 82/252 (32.54%), Postives = 131/252 (51.98%), Query Frame = 1 

Query: 4   IAKANGNHLPEGVFLA--IDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVAI 63
           +A+ NG  LP  + L   I E   Q+S  ++  +T  +              R+I+ +  
Sbjct: 296 LARLNGKQLPADLSLVDPIPERDDQTSSSEKFWKTKWAVK------------RIIMVMMA 355

Query: 64  NFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWFS 123
            F    VYYG+ LN  NL+ N+YLTVA+NA+ E PA  I + LL V  R+PL   + + +
Sbjct: 356 GFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPLFSNSSYLA 415

Query: 124 GVFC-LCGSL-----MKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAA 183
           G  C LC  L     ++ + + K +++    +G    +  Y++LY+Y  ELFPT VRN A
Sbjct: 416 GFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELFPTNVRNTA 475

Query: 184 LGCGTQASQMGAILAPFVVVMG---GGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMG 243
           +    QA  +GA  AP +V +G     + F VF    ++ G ++ +L ET N PLY+T+ 
Sbjct: 476 VSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRNAPLYETLA 533

Query: 244 GIEDGEKDCLNN 245
             + G+ + + N
Sbjct: 536 --QQGKAEEIEN 533

[Close]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match: A0A0A0L334_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094510 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.4e-113
Identity = 213/241 (88.38%), Postives = 229/241 (95.02%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVA 60
           MAAIAKANGNHLP+GVFLA+DEDTK+    D+IQ +TQSGSLLDV+RSPITRIRLILAVA
Sbjct: 275 MAAIAKANGNHLPDGVFLALDEDTKR----DEIQGSTQSGSLLDVIRSPITRIRLILAVA 334

Query: 61  INFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF 120
           INFMCAVVYYGLSLNVVNLDTNIY+ VA+NAVAEMPAFLITA+LLDVCGRKPLAIGTLWF
Sbjct: 335 INFMCAVVYYGLSLNVVNLDTNIYMNVAVNAVAEMPAFLITAVLLDVCGRKPLAIGTLWF 394

Query: 121 SGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGT 180
           SGVFC  GSLMKGVG+WK++RM CG+LGIFGMAGTYNLLYIYTAELFPTVVRNAALG  T
Sbjct: 395 SGVFCWAGSLMKGVGIWKVIRMGCGVLGIFGMAGTYNLLYIYTAELFPTVVRNAALGSAT 454

Query: 181 QASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKD 240
           QASQMGAILAPFVVVMGGGLPFAVFAGCGI+GGALAFYLPETLNKPLYDTMGG+EDGE+ 
Sbjct: 455 QASQMGAILAPFVVVMGGGLPFAVFAGCGIVGGALAFYLPETLNKPLYDTMGGMEDGERV 511

Query: 241 C 242
           C
Sbjct: 515 C 511

[Close]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match: B9SY49_RICCO (Organic cation transporter, putative OS=Ricinus communis GN=RCOM_0987060 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 180/244 (73.77%), Postives = 211/244 (86.48%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTK------QSSKQDQIQQTTQSGSLLDVMRSPITRIR 60
           M+ IAK+NGNHLP+GV LA+DE+        QS K+   ++   +GSL+DV++SP+TR+R
Sbjct: 278 MSTIAKSNGNHLPDGVILALDEEVNNGTRDGQSCKEKIAKKEAIAGSLIDVIQSPVTRVR 337

Query: 61  LILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLA 120
           L L VAI+F+C+VVYYGLSLNVVNLDTN+YLTV LNAVAEMPAF ITA+LL+  GRKPLA
Sbjct: 338 LFLTVAISFLCSVVYYGLSLNVVNLDTNLYLTVLLNAVAEMPAFTITAILLNKFGRKPLA 397

Query: 121 IGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNA 180
           +GT WFSG+FCL GSLM  VG+WK+ RM+CG+LGIFGMAGTYNLL+IYTAELFPTVVRNA
Sbjct: 398 VGTQWFSGLFCLTGSLMGSVGIWKVTRMICGLLGIFGMAGTYNLLFIYTAELFPTVVRNA 457

Query: 181 ALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGI 239
           ALGC TQA+QMGAILAP VVV+GGGLPFAVFA CGIMGG LAFYLPETLN+PLYDTM G+
Sbjct: 458 ALGCATQAAQMGAILAPLVVVLGGGLPFAVFAVCGIMGGFLAFYLPETLNRPLYDTMTGM 517

[Close]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match: B9I065_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s13400g PE=4 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-94
Identity = 179/244 (73.36%), Postives = 206/244 (84.43%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTK------QSSKQDQIQQTTQSGSLLDVMRSPITRIR 60
           M  IAK+NG HLP+GV LA+DED        QS KQ    +   +GS++DV+RSP+TR+R
Sbjct: 66  MRTIAKSNGKHLPDGVVLALDEDVNESYVNDQSDKQGFATKEAITGSVIDVIRSPVTRVR 125

Query: 61  LILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLA 120
           L LAVAINFMC+VVYYGLSLNVVNLDTN++L V LNAVAEMPAF ITALLLD  GRKPL 
Sbjct: 126 LFLAVAINFMCSVVYYGLSLNVVNLDTNLHLNVVLNAVAEMPAFTITALLLDKFGRKPLT 185

Query: 121 IGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNA 180
           IGTLWFSG FC  GSLM GVG+WK+VRM+CG+LGIFGMAGTYNLL+IYTAELFPTVVRN 
Sbjct: 186 IGTLWFSGFFCFAGSLMGGVGIWKVVRMICGILGIFGMAGTYNLLFIYTAELFPTVVRNV 245

Query: 181 ALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGI 239
           ALGC TQ++QMGAILAPF+VVMGG LPFAVFA CG +GG LAFYLPETLN+PLYDT+ G+
Sbjct: 246 ALGCATQSAQMGAILAPFIVVMGGALPFAVFASCGFVGGLLAFYLPETLNRPLYDTITGM 305

[Close]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match: U7DZ61_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0489s002101g PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.3e-94
Identity = 178/244 (72.95%), Postives = 205/244 (84.02%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTK------QSSKQDQIQQTTQSGSLLDVMRSPITRIR 60
           M  IAK+NG HLP+GV LA+DED        QS KQ    +   +GS++DV+RSP+TR+R
Sbjct: 50  MRTIAKSNGKHLPDGVVLALDEDVNESYVNDQSDKQGFATKEAITGSVIDVIRSPVTRVR 109

Query: 61  LILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLA 120
           L LAVAINFMC+VVYYGLSLNVVNLDTN++L V LNAVAEMPAF ITALLLD  GRKPL 
Sbjct: 110 LFLAVAINFMCSVVYYGLSLNVVNLDTNLHLNVVLNAVAEMPAFTITALLLDKFGRKPLT 169

Query: 121 IGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNA 180
           IGTLWFSG FC  G LM GVG+WK+VRM+CG+LGIFGMAGTYNLL+IYTAELFPTVVRN 
Sbjct: 170 IGTLWFSGFFCFAGCLMGGVGIWKVVRMICGILGIFGMAGTYNLLFIYTAELFPTVVRNV 229

Query: 181 ALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGI 239
           ALGC TQ++QMGAILAPF+VVMGG LPFAVFA CG +GG LAFYLPETLN+PLYDT+ G+
Sbjct: 230 ALGCATQSAQMGAILAPFIVVMGGALPFAVFASCGFVGGLLAFYLPETLNRPLYDTITGM 289

[Close]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match: M5WTH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003853mg PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.4e-92
Identity = 179/251 (71.31%), Postives = 207/251 (82.47%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDE----DTKQSSKQDQI------QQTTQSGSLLDVMRSPI 60
           M AIAK+N  HLPEGV LA+DE    D+  ++++DQ        +   SGSL+DV++ P+
Sbjct: 290 MRAIAKSNNKHLPEGVVLALDEEANNDSPTTNEEDQTYKELLDSKDAISGSLIDVVKLPM 349

Query: 61  TRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGR 120
           TR+RL LAVAINF+C+VVYYGLSLNVVNL+TN+Y+ V LNAVAEMPAF ITA+LLD  GR
Sbjct: 350 TRMRLFLAVAINFLCSVVYYGLSLNVVNLETNLYINVLLNAVAEMPAFTITAILLDKYGR 409

Query: 121 KPLAIGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTV 180
           KPLAIGTLWFSGVFC  GS +   G WK+V+MVCG+LGIFGMAGTYNLL+IYT ELFPTV
Sbjct: 410 KPLAIGTLWFSGVFCFAGSFVGNAGAWKVVKMVCGILGIFGMAGTYNLLFIYTTELFPTV 469

Query: 181 VRNAALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDT 240
           VRNAALGC TQA+QMGAIL+PFVVV+GGGLPFAVFA CGI GG  AFYLPETLNKPLYDT
Sbjct: 470 VRNAALGCATQAAQMGAILSPFVVVLGGGLPFAVFAVCGIAGGVFAFYLPETLNKPLYDT 529

Query: 241 MGGIEDGEKDC 242
           M G+EDGE  C
Sbjct: 530 MAGMEDGEGAC 540

[Close]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match: AT3G20660.1 (AT3G20660.1 organic cation/carnitine transporter4)

HSP 1 Score: 304.3 bits (778), Expect = 6.8e-83
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVA 60
           M +IAK NG H+P GV LA+D+D + ++ +   + T   GSL DV+ SP+ R+RL+++VA
Sbjct: 280 MHSIAKTNGRHIPAGVTLALDDDVENNNGE---RNTAVEGSLKDVILSPLMRMRLVISVA 339

Query: 61  INFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF 120
           I+F  ++VYYGLSLNV NL TN+YL V +NAV+EMPAF ITA+LLD  GRKPL+IGT WF
Sbjct: 340 ISFTVSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWF 399

Query: 121 SGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGT 180
           S VFCL G  + G G WK VRMV G+LGIFGMAGTYNLL+IY AELFPTVVRNAALGC T
Sbjct: 400 SCVFCLVGFSVWGAGPWKSVRMVSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCAT 459

Query: 181 QASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKD 240
           QA+QMGAILAPFVVV+G  LPF VFA CG++GG LAFYLPETLNKPLYDTM G+ + E +
Sbjct: 460 QAAQMGAILAPFVVVLGEELPFGVFAVCGLVGGGLAFYLPETLNKPLYDTMFGMHEAESE 516

[Close]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match: AT1G73220.1 (AT1G73220.1 organic cation/carnitine transporter1)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 82/252 (32.54%), Postives = 131/252 (51.98%), Query Frame = 1 

Query: 4   IAKANGNHLPEGVFLA--IDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVAI 63
           +A+ NG  LP  + L   I E   Q+S  ++  +T  +              R+I+ +  
Sbjct: 296 LARLNGKQLPADLSLVDPIPERDDQTSSSEKFWKTKWAVK------------RIIMVMMA 355

Query: 64  NFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWFS 123
            F    VYYG+ LN  NL+ N+YLTVA+NA+ E PA  I + LL V  R+PL   + + +
Sbjct: 356 GFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPLFSNSSYLA 415

Query: 124 GVFC-LCGSL-----MKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAA 183
           G  C LC  L     ++ + + K +++    +G    +  Y++LY+Y  ELFPT VRN A
Sbjct: 416 GFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELFPTNVRNTA 475

Query: 184 LGCGTQASQMGAILAPFVVVMG---GGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMG 243
           +    QA  +GA  AP +V +G     + F VF    ++ G ++ +L ET N PLY+T+ 
Sbjct: 476 VSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRNAPLYETLA 533

Query: 244 GIEDGEKDCLNN 245
             + G+ + + N
Sbjct: 536 --QQGKAEEIEN 533

[Close]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match: AT1G16390.1 (AT1G16390.1 organic cation/carnitine transporter 3)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 65/182 (35.71%), Postives = 96/182 (52.75%), Query Frame = 1 

Query: 54  RLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPL 113
           RL+ A+ + F   +VYYG+ L + NL+ N+YL V  NA++E PAFLIT   +D   R+  
Sbjct: 325 RLLAAMVVGFGIGMVYYGMPLALTNLNFNLYLGVVFNALSEFPAFLITFFFIDKINRRDA 384

Query: 114 AIGTLWFSGV-FCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVR 173
            IG    SG+   L   L + +G    +++V  ++  F     +N+  IYT E+FPT VR
Sbjct: 385 LIGFTALSGISSALIAVLGQQLGS---LQIVLELVSFFSACTAFNMTLIYTIEMFPTCVR 444

Query: 174 NAALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGI---MGGALAFYLPETLNKPLYD 232
           N+A+    QA   G + +P +V  G    F  +   G+   + G   F LPET    L D
Sbjct: 445 NSAISMVRQALVFGGVFSPVMVAAGRENQFWSYGLFGLIIGLCGLFVFGLPETRGSVLCD 503

[Close]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match: AT1G79360.1 (AT1G79360.1 organic cation/carnitine transporter 2)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-19
Identity = 73/219 (33.33%), Postives = 110/219 (50.23%), Query Frame = 1 

Query: 18  LAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVV 77
           L  +ED ++ S    I  T +   +L   R  + R+  ++A+A  F   +VYYG+ L + 
Sbjct: 295 LPFEEDEEKPSTNVNIFTTMK---VLVEKRWALKRLSAVMAIA--FGIGLVYYGMPLALS 354

Query: 78  NLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWFSGVFCLCGSLMKG--VG 137
           NLD NIYL+ A NA+ ++PA LIT  L+D   R+   IG     GV  +    +    +G
Sbjct: 355 NLDFNIYLSAAFNALMDLPANLITLFLVDKLSRRNALIGFTALGGVSSVLIFALHNMRIG 414

Query: 138 MWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVV 197
               +++   ++  F     +N+  IYT ELFPT VRN+A+    QA  +G + +P +V 
Sbjct: 415 NHGALQLALELISYFSACSAFNMEMIYTIELFPTCVRNSAIAMARQALVLGGVFSPIMVA 474

Query: 198 MGGGLPFAVFAGCGIMGGALAFY---LPETLNKPLYDTM 232
            G    F  F   G+  G L  +   LPET    L DTM
Sbjct: 475 AGRKNAFWSFGLFGLAIGLLGLFAVGLPETRGSDLCDTM 508

[Close]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match: AT1G79410.1 (AT1G79410.1 organic cation/carnitine transporter5)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 76/218 (34.86%), Postives = 106/218 (48.62%), Query Frame = 1 

Query: 22  EDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDT 81
           E      +  +  + T S S+ D+        R+ L + I F   + YYG+ L V ++  
Sbjct: 288 ESVSSRLRPKETLEQTSSYSIKDLFIIKWAFRRVTLVMIIMFGLGMSYYGVPLAVRDIKV 347

Query: 82  NIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF---SGVFCLCGSLMKGVGMWK 141
           NIY++ ALNA+ E+P F++T +LL+   R+   +        SGV C   SL    G  K
Sbjct: 348 NIYMSEALNAMVELPTFVVTPILLEQFSRRSSVLVNCLIGGASGVLCFVMSL---YGRTK 407

Query: 142 IVRMVCGMLGIFGMAGT-YNLLYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVMG 201
           I   +   LG F  A   +NL+ IY  ELFPT VRN+A     QA  +G    P +  +G
Sbjct: 408 IAFAL--ELGSFFCARIGFNLMAIYLVELFPTCVRNSATMMLRQALVVGGACCPLIASLG 467

Query: 202 GGLP---FAVFAGCGIMG-GALAFYLPETLNKPLYDTM 232
             +P   FAVF G  + G G  A  LPET    L DTM
Sbjct: 468 RNVPSLSFAVF-GFAMSGLGLFALLLPETKGLSLCDTM 499

[Close]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match: gi|659102828|ref|XP_008452334.1| (PREDICTED: organic cation/carnitine transporter 4-like [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114
Identity = 215/241 (89.21%), Postives = 230/241 (95.44%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVA 60
           MAAIAKANGNHLP+GVFLA+DEDTK    +D+IQQ+TQSGSLLDVMRSPITRIRLILAVA
Sbjct: 275 MAAIAKANGNHLPDGVFLALDEDTK----RDEIQQSTQSGSLLDVMRSPITRIRLILAVA 334

Query: 61  INFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF 120
           INFMCAVVYYGLSLNVVNLDTNIY+ VA+NAVAEMPAFLITA+LLDVCGRKPLAIGTLWF
Sbjct: 335 INFMCAVVYYGLSLNVVNLDTNIYMNVAVNAVAEMPAFLITAVLLDVCGRKPLAIGTLWF 394

Query: 121 SGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGT 180
           SGVFCL GS MKGVG+WK++RM CG+LGIFGMAGTYNLLYIYTAELFPTVVRNAALG  T
Sbjct: 395 SGVFCLAGSSMKGVGIWKVIRMGCGVLGIFGMAGTYNLLYIYTAELFPTVVRNAALGSAT 454

Query: 181 QASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKD 240
           QASQMGAILAPFVVVMGGGLPFAVFAGCGI+GGALAFYLPETLNKPLYDTMGG+EDGE+ 
Sbjct: 455 QASQMGAILAPFVVVMGGGLPFAVFAGCGIVGGALAFYLPETLNKPLYDTMGGMEDGERV 511

Query: 241 C 242
           C
Sbjct: 515 C 511

[Close]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match: gi|449464442|ref|XP_004149938.1| (PREDICTED: organic cation/carnitine transporter 4-like [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 3.5e-113
Identity = 213/241 (88.38%), Postives = 229/241 (95.02%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQSGSLLDVMRSPITRIRLILAVA 60
           MAAIAKANGNHLP+GVFLA+DEDTK+    D+IQ +TQSGSLLDV+RSPITRIRLILAVA
Sbjct: 275 MAAIAKANGNHLPDGVFLALDEDTKR----DEIQGSTQSGSLLDVIRSPITRIRLILAVA 334

Query: 61  INFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAIGTLWF 120
           INFMCAVVYYGLSLNVVNLDTNIY+ VA+NAVAEMPAFLITA+LLDVCGRKPLAIGTLWF
Sbjct: 335 INFMCAVVYYGLSLNVVNLDTNIYMNVAVNAVAEMPAFLITAVLLDVCGRKPLAIGTLWF 394

Query: 121 SGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAALGCGT 180
           SGVFC  GSLMKGVG+WK++RM CG+LGIFGMAGTYNLLYIYTAELFPTVVRNAALG  T
Sbjct: 395 SGVFCWAGSLMKGVGIWKVIRMGCGVLGIFGMAGTYNLLYIYTAELFPTVVRNAALGSAT 454

Query: 181 QASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIEDGEKD 240
           QASQMGAILAPFVVVMGGGLPFAVFAGCGI+GGALAFYLPETLNKPLYDTMGG+EDGE+ 
Sbjct: 455 QASQMGAILAPFVVVMGGGLPFAVFAGCGIVGGALAFYLPETLNKPLYDTMGGMEDGERV 511

Query: 241 C 242
           C
Sbjct: 515 C 511

[Close]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match: gi|470134806|ref|XP_004303227.1| (PREDICTED: organic cation/carnitine transporter 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 357.1 bits (915), Expect = 2.5e-95
Identity = 181/243 (74.49%), Postives = 205/243 (84.36%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTKQSSKQDQIQQTTQ-----SGSLLDVMRSPITRIRL 60
           M AIAK+NGNHLP GV L++DED   +    +   ++      SGSL+DV++SP TRIRL
Sbjct: 284 MRAIAKSNGNHLPSGVVLSLDEDANDTDHHHETCVSSNDKEAISGSLIDVIKSPTTRIRL 343

Query: 61  ILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLAI 120
            LAV I F+C+VVYYGLSLNVVNLDTN+YL V LNAVAEMPAF ITA+LLD  GRKPLAI
Sbjct: 344 FLAVTITFLCSVVYYGLSLNVVNLDTNLYLNVLLNAVAEMPAFAITAILLDRYGRKPLAI 403

Query: 121 GTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNAA 180
           GTLWFSG+FC  GSLMK VG+WK+VRMVCG+LGIFGMAGTYNLL+IYT ELFPTVVRNAA
Sbjct: 404 GTLWFSGIFCFVGSLMKSVGIWKVVRMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAA 463

Query: 181 LGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGIE 239
           LGC TQA+QMGAILAPFVVV+GGGLPF+VFA CGI GG  AFYLPETLN+PLYDTM G+E
Sbjct: 464 LGCATQAAQMGAILAPFVVVLGGGLPFSVFAACGIAGGVFAFYLPETLNRPLYDTMAGME 523

[Close]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match: gi|255580174|ref|XP_002530918.1| (PREDICTED: organic cation/carnitine transporter 4 [Ricinus communis])

HSP 1 Score: 356.7 bits (914), Expect = 3.3e-95
Identity = 180/244 (73.77%), Postives = 211/244 (86.48%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTK------QSSKQDQIQQTTQSGSLLDVMRSPITRIR 60
           M+ IAK+NGNHLP+GV LA+DE+        QS K+   ++   +GSL+DV++SP+TR+R
Sbjct: 278 MSTIAKSNGNHLPDGVILALDEEVNNGTRDGQSCKEKIAKKEAIAGSLIDVIQSPVTRVR 337

Query: 61  LILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLA 120
           L L VAI+F+C+VVYYGLSLNVVNLDTN+YLTV LNAVAEMPAF ITA+LL+  GRKPLA
Sbjct: 338 LFLTVAISFLCSVVYYGLSLNVVNLDTNLYLTVLLNAVAEMPAFTITAILLNKFGRKPLA 397

Query: 121 IGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNA 180
           +GT WFSG+FCL GSLM  VG+WK+ RM+CG+LGIFGMAGTYNLL+IYTAELFPTVVRNA
Sbjct: 398 VGTQWFSGLFCLTGSLMGSVGIWKVTRMICGLLGIFGMAGTYNLLFIYTAELFPTVVRNA 457

Query: 181 ALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGI 239
           ALGC TQA+QMGAILAP VVV+GGGLPFAVFA CGIMGG LAFYLPETLN+PLYDTM G+
Sbjct: 458 ALGCATQAAQMGAILAPLVVVLGGGLPFAVFAVCGIMGGFLAFYLPETLNRPLYDTMTGM 517

[Close]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match: gi|566195282|ref|XP_002317556.2| (hypothetical protein POPTR_0011s13400g [Populus trichocarpa])

HSP 1 Score: 354.4 bits (908), Expect = 1.6e-94
Identity = 179/244 (73.36%), Postives = 206/244 (84.43%), Query Frame = 1 

Query: 1   MAAIAKANGNHLPEGVFLAIDEDTK------QSSKQDQIQQTTQSGSLLDVMRSPITRIR 60
           M  IAK+NG HLP+GV LA+DED        QS KQ    +   +GS++DV+RSP+TR+R
Sbjct: 66  MRTIAKSNGKHLPDGVVLALDEDVNESYVNDQSDKQGFATKEAITGSVIDVIRSPVTRVR 125

Query: 61  LILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAVAEMPAFLITALLLDVCGRKPLA 120
           L LAVAINFMC+VVYYGLSLNVVNLDTN++L V LNAVAEMPAF ITALLLD  GRKPL 
Sbjct: 126 LFLAVAINFMCSVVYYGLSLNVVNLDTNLHLNVVLNAVAEMPAFTITALLLDKFGRKPLT 185

Query: 121 IGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGMAGTYNLLYIYTAELFPTVVRNA 180
           IGTLWFSG FC  GSLM GVG+WK+VRM+CG+LGIFGMAGTYNLL+IYTAELFPTVVRN 
Sbjct: 186 IGTLWFSGFFCFAGSLMGGVGIWKVVRMICGILGIFGMAGTYNLLFIYTAELFPTVVRNV 245

Query: 181 ALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMGGALAFYLPETLNKPLYDTMGGI 239
           ALGC TQ++QMGAILAPF+VVMGG LPFAVFA CG +GG LAFYLPETLN+PLYDT+ G+
Sbjct: 246 ALGCATQSAQMGAILAPFIVVMGGALPFAVFASCGFVGGLLAFYLPETLNRPLYDTITGM 305

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
OCT4_ARATH1.2e-8166.25Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana GN=OCT4 PE=2 SV=1[more]
S22AF_XENLA4.2e-2634.12Solute carrier family 22 member 15 OS=Xenopus laevis GN=slc22a15 PE=2 SV=2[more]
S22FL_XENLA7.2e-2637.00Solute carrier family 22 member 15-like OS=Xenopus laevis GN=slc22a15b PE=2 SV=1[more]
S22FL_XENTR1.2e-2536.00Solute carrier family 22 member 15-like OS=Xenopus tropicalis GN=slc22a15b PE=2 ... [more]
OCT1_ARATH4.7e-2532.54Organic cation/carnitine transporter 1 OS=Arabidopsis thaliana GN=OCT1 PE=2 SV=1[more]
BLAST of Cp4.1LG01g08390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L334_CUCSA2.4e-11388.38Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094510 PE=4 SV=1[more]
B9SY49_RICCO2.3e-9573.77Organic cation transporter, putative OS=Ricinus communis GN=RCOM_0987060 PE=4 SV... [more]
B9I065_POPTR1.1e-9473.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s13400g PE=4 SV=2[more]
U7DZ61_POPTR4.3e-9472.95Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0489s002101g ... [more]
M5WTH4_PRUPE1.4e-9271.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003853mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g08390 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20660.16.8e-8366.25 organic cation/carnitine transporter4[more]
AT1G73220.12.6e-2632.54 organic cation/carnitine transporter1[more]
AT1G16390.11.8e-1935.71 organic cation/carnitine transporter 3[more]
AT1G79360.13.1e-1933.33 organic cation/carnitine transporter 2[more]
AT1G79410.13.6e-1534.86 organic cation/carnitine transporter5[more]
BLAST of Cp4.1LG01g08390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102828|ref|XP_008452334.1|1.8e-11489.21PREDICTED: organic cation/carnitine transporter 4-like [Cucumis melo][more]
gi|449464442|ref|XP_004149938.1|3.5e-11388.38PREDICTED: organic cation/carnitine transporter 4-like [Cucumis sativus][more]
gi|470134806|ref|XP_004303227.1|2.5e-9574.49PREDICTED: organic cation/carnitine transporter 4 [Fragaria vesca subsp. vesca][more]
gi|255580174|ref|XP_002530918.1|3.3e-9573.77PREDICTED: organic cation/carnitine transporter 4 [Ricinus communis][more]
gi|566195282|ref|XP_002317556.2|1.6e-9473.36hypothetical protein POPTR_0011s13400g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0044238 primary metabolic process
biological_process GO:0046482 para-aminobenzoic acid metabolic process
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0009407 toxin catabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0015706 nitrate transport
biological_process GO:0044712 single-organism catabolic process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0032787 monocarboxylic acid metabolic process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044446 intracellular organelle part
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08390.1Cp4.1LG01g08390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020846Major facilitator superfamily domainunknownSSF103473MFS general substrate transportercoord: 27..227
score: 1.19
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 52..221
score: 5.
NoneNo IPR availablePANTHERPTHR24064FAMILY NOT NAMEDcoord: 1..239
score: 9.2
NoneNo IPR availablePANTHERPTHR24064:SF292ORGANIC CATION/CARNITINE TRANSPORTER 4coord: 1..239
score: 9.2