Cp4.1LG01g08220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGCGGCAAGCCAAAAGTTGTGAATGTTGGACAGACGCGCGATGAAAACGGGTAATTTGGCTCAACAAGGTTTCCGAAAATGGGGTCTCCTAAACATAGCGAATTTGACCCATTCTGCCTGGAATCAAAACTTGGGGGTTTGGGACAGGAAGAAACAAGAAAAACAAACATCAAGGTAAAACTTCAGCTCCTTTTTCCCGATCGAGAGAGACCAGAAAAGCAAAAACCATCTGGTTTTTTTCCGGGAAATAGCTGGTTTTCTTTTCCTTTCAAGTTTATCTCCTTTGTCGGATCCCTTTACAAATTCTTCTTTAATTTTCCTTTTTCTTTTTGGCTTTGTTTGTGGGGTTGAAGCTGAAGATAGCATTTCCCCTTTGTTATTTGCTGATTTTGTTTCATCCCCCACACTCTTTTCTGGTTTTCTGTTATTATGTGCTTTGATTTTCCGGGATTTGTTCAATGCAACTTCTTGACTGTTGTTTGTGACTGACTGCATTTGAGTTTGGGAATTAACAAAAAGGAAGATGAATTGCTTTCAATGTTGCTTGACAGACAAGAAAGTCGATAGAAAATCTCTGAAAAAGAGCATTAAGGAGTATCAGGACACAAAAGCTCTAACCTCTTTTGCCAACATTTCCTTTAAATCTGGTAACCCTTTTGTTCCTTTGCTCCCTTCATCCCAATTTTTTTCATTTTATTTCATGTTTTTCATATGGCTTGAGGCATTTTGGTGGTGGTTTCTTGGTTTATAATCCTTGATCATATGTTTCATTTCAAAAACTTGGCTGTTGCAGATAGCAGTCGACGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCACAGCTCAAACTTTTACATTTGGTGATCTAACCACTGCTACTAATAACTTCGACCATGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGCATCATTGAAAGCACAAAACAAGTATATAATGACACAATCTTTCATTTCATATGTTCCTTCTGTGCAAATTATAAGTGTTCTTGTGTTCTCTATTCATTTTTGTTTCCGTTTTCGTCTCGTCTTCCTTAGGTAACAGCTGTGAAGCAACTCGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTGAATTTGGTTGGGTATTGTGCTGATGGGGATCAGAGGATCTTGGTTTATGAGTACATGGCTCACGGCTCCTTGGAAGATCATCTTCTTGGTATGTCTTCACAATTCCAAATGTCACTGAATTTATATTAGAAATTCTGTTTGAGTTCGTAGATCTAGCCATCTTCCATGATTTACAACAGCCTTTACATATTCTTTTTTCATGTAAATGTTTCGTTGATCCGTTGAAATGCCAAAGAAGCTCGATCTTTAGCTTGTCACAATCAAATTTCTTATACTAGCTTCTAAGGTTGGAGCCTCCTATTTTCAGATATAGCGCCGGATAAGACGCCTCTGGACTGGAAGACGAGGATGAAAATTGCTGAAGGAGCAGCGAAAGGACTTGAATACTTGCACGAAACTGCGAATCCTCCTGTGATATATCGTGATTTCAAAGCTTCGAACATATTGTTGGATGATGAATTCAATCCAAAGCTTTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGATAAATCTCATGTTTCCACTAGAGTGATGGGAACCTATGGTTATTGTGCTCCTGAATACGCACTCACAGGACAGTTAACGACGAAATCAGATGTTTACAGTTTTGGTGTCGTGTTTCTGGAGATAATAACTGGAAGACGAGTTATAGACAACGCGAGACCAACAGCAGAGCAAAACTTAATCACTTGGGTATGCTGGATAATCTTAATCTGTTAAGAGTAAAAACTTGTTAATTCTCAACCATGTTTACTTCATTACAGGCACAGCCTCTTTTCAAGGACAGAAGGAAATTTACACTCATGGCAGATCCAAAGCTAGAAGGAAACTATCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCTATGTGTTTACAAGAGGAAGCGGGTACACGGCCATTGATCAGTGATGTGGTTACAGCTCTCGAATTTTTAGCTGCAAATAAGGATATCGATGCAGACGTAGATGACGAAGAGCCAGGTTTGATATCGGGAGCAGGTTTGGGTTCAGCTTCTCCTGATAGAAGTAGTAGTAATGGTGATAAAAATGTTGATGTTGAGGGTGAGTGATGGGAGGTGGTTTACAATTTGATTGACTAAAGGGAGAAGACATTTGGAGCTTTGGCAACTGTAACCGGGGCAGCTTGGCTCCCCATTTCCTTCATTCTTTGAATATTTTCCAATATGACAAGGCCATTTAAGGAT TATGCGGCAAGCCAAAAGTTGTGAATGTTGGACAGACGCGCGATGAAAACGGGTAATTTGGCTCAACAAGGTTTCCGAAAATGGGGTCTCCTAAACATAGCGAATTTGACCCATTCTGCCTGGAATCAAAACTTGGGGGTTTGGGACAGGAAGAAACAAGAAAAACAAACATCAAGGTAAAACTTCAGCTCCTTTTTCCCGATCGAGAGAGACCAGAAAAGCAAAAACCATCTGGTTTTTTTCCGGGAAATAGCTGGTTTTCTTTTCCTTTCAAGTTTATCTCCTTTGTCGGATCCCTTTACAAATTCTTCTTTAATTTTCCTTTTTCTTTTTGGCTTTGTTTGTGGGGTTGAAGCTGAAGATAGCATTTCCCCTTTGTTATTTGCTGATTTTGTTTCATCCCCCACACTCTTTTCTGGTTTTCTGTTATTATGTGCTTTGATTTTCCGGGATTTGTTCAATGCAACTTCTTGACTGTTGTTTGTGACTGACTGCATTTGAGTTTGGGAATTAACAAAAAGGAAGATGAATTGCTTTCAATGTTGCTTGACAGACAAGAAAGTCGATAGAAAATCTCTGAAAAAGAGCATTAAGGAGTATCAGGACACAAAAGCTCTAACCTCTTTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGACGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCACAGCTCAAACTTTTACATTTGGTGATCTAACCACTGCTACTAATAACTTCGACCATGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGCATCATTGAAAGCACAAAACAAGCACAGCCTCTTTTCAAGGACAGAAGGAAATTTACACTCATGGCAGATCCAAAGCTAGAAGGAAACTATCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCTATGTGTTTACAAGAGGAAGCGGGTACACGGCCATTGATCAGTGATGTGGTTACAGCTCTCGAATTTTTAGCTGCAAATAAGGATATCGATGCAGACGTAGATGACGAAGAGCCAGGTTTGATATCGGGAGCAGGTTTGGGTTCAGCTTCTCCTGATAGAAGTAGTAGTAATGGTGATAAAAATGTTGATGTTGAGGGTGAGTGATGGGAGGTGGTTTACAATTTGATTGACTAAAGGGAGAAGACATTTGGAGCTTTGGCAACTGTAACCGGGGCAGCTTGGCTCCCCATTTCCTTCATTCTTTGAATATTTTCCAATATGACAAGGCCATTTAAGGAT ATGAATTGCTTTCAATGTTGCTTGACAGACAAGAAAGTCGATAGAAAATCTCTGAAAAAGAGCATTAAGGAGTATCAGGACACAAAAGCTCTAACCTCTTTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGACGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCACAGCTCAAACTTTTACATTTGGTGATCTAACCACTGCTACTAATAACTTCGACCATGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGCATCATTGAAAGCACAAAACAAGCACAGCCTCTTTTCAAGGACAGAAGGAAATTTACACTCATGGCAGATCCAAAGCTAGAAGGAAACTATCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCTATGTGTTTACAAGAGGAAGCGGGTACACGGCCATTGATCAGTGATGTGGTTACAGCTCTCGAATTTTTAGCTGCAAATAAGGATATCGATGCAGACGTAGATGACGAAGAGCCAGGTTTGATATCGGGAGCAGGTTTGGGTTCAGCTTCTCCTGATAGAAGTAGTAGTAATGGTGATAAAAATGTTGATGTTGAGGGTGAGTGA MNCFQCCLTDKKVDRKSLKKSIKEYQDTKALTSFANISFKSDSSRRRYITEEIKKLGKGNITAQTFTFGDLTTATNNFDHENLLGEGGFGRVYKGIIESTKQAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVAAMCLQEEAGTRPLISDVVTALEFLAANKDIDADVDDEEPGLISGAGLGSASPDRSSSNGDKNVDVEGE
BLAST of Cp4.1LG01g08220 vs. Swiss-Prot
Match: CDL1_ARATH (Serine/threonine-protein kinase CDL1 OS=Arabidopsis thaliana GN=CDL1 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18 Identity = 65/162 (40.12%), Postives = 86/162 (53.09%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.5e-16 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. Swiss-Prot
Match: Y3707_ARATH (Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.8e-15 Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. Swiss-Prot
Match: LIPG1_ARATH (Receptor-like kinase LIP1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TrEMBL
Match: A0A0A0L7N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077750 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 7.1e-42 Identity = 86/102 (84.31%), Postives = 98/102 (96.08%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TrEMBL
Match: A0A059BW28_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_F03450 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35 Identity = 85/155 (54.84%), Postives = 105/155 (67.74%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TrEMBL
Match: A0A166AI83_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010043 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.2e-35 Identity = 101/249 (40.56%), Postives = 137/249 (55.02%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TrEMBL
Match: U5GUL9_POPTR (Kinase family protein OS=Populus trichocarpa GN=POPTR_0001s44740g PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.8e-35 Identity = 72/102 (70.59%), Postives = 89/102 (87.25%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TrEMBL
Match: M5X7L7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006853mg PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.9e-34 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TAIR10
Match: AT3G20530.1 (AT3G20530.1 Protein kinase superfamily protein) HSP 1 Score: 117.9 bits (294), Expect = 7.6e-27 Identity = 61/104 (58.65%), Postives = 81/104 (77.88%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TAIR10
Match: AT5G18610.1 (AT5G18610.1 Protein kinase superfamily protein) HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21 Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TAIR10
Match: AT5G02800.1 (AT5G02800.1 Protein kinase superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 6.9e-20 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TAIR10
Match: AT5G13160.1 (AT5G13160.1 Protein kinase superfamily protein) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19 Identity = 65/162 (40.12%), Postives = 86/162 (53.09%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. TAIR10
Match: AT1G61860.1 (AT1G61860.1 Protein kinase superfamily protein) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. NCBI nr
Match: gi|659126928|ref|XP_008463434.1| (PREDICTED: serine/threonine-protein kinase PBS1-like [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42 Identity = 86/102 (84.31%), Postives = 98/102 (96.08%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. NCBI nr
Match: gi|449470433|ref|XP_004152921.1| (PREDICTED: serine/threonine-protein kinase CDL1 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41 Identity = 86/102 (84.31%), Postives = 98/102 (96.08%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. NCBI nr
Match: gi|629104692|gb|KCW70161.1| (hypothetical protein EUGRSUZ_F03450, partial [Eucalyptus grandis]) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35 Identity = 85/155 (54.84%), Postives = 105/155 (67.74%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. NCBI nr
Match: gi|743930094|ref|XP_011009289.1| (PREDICTED: serine/threonine-protein kinase PBS1 [Populus euphratica]) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35 Identity = 72/102 (70.59%), Postives = 88/102 (86.27%), Query Frame = 1
BLAST of Cp4.1LG01g08220 vs. NCBI nr
Match: gi|702378295|ref|XP_010062992.1| (PREDICTED: serine/threonine-protein kinase PBS1-like [Eucalyptus grandis]) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35 Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |