Cp4.1LG01g07890 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g07890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Cp4.1LG01 : 5206489 .. 5208772 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACCCCAAATTCACAACAACAAATCGCACCTCCAACCACCGATCATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGTAATTTCCTTTTTTTTTTTTTTAAATTTAATTATCTAATAATAATAATATATATTGGAATTAGTAGTCATAATATTTATTTAACCTTGACAGGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAGTAAGCAAATTAATCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCATAATAAAATTAAACTTCATAATTAAAAGTGCTTATAAACAACAAGGAATTGAATTTTATATTGTTCATGAATTGAAATGAAAATCGTTAATTTAATTTTAATTTTAATTTTAATTTTTGTAAAATGGGTTTGAATTTATTGAATGACATTGCAGACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGGTTCGGTTTCGGGTTTCGGGTTTCGGGTTTCCAGTTTCGAGTTTCAATTTGATCTCTATAGCGTTTTTGTAATATTTTAAAGGGTTTATGATACATTGAACAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGGTGAATTTAGAACTTGAAAAGAAGGAAACATTTCATTTTCCATTTTATTTATTTATTTATTTATTATTATTATTATTCCTTCTCAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGGTTTGTTTCATATAATCTTCTCTTTAATTATCCAATATGGGATTCCAACAATATGGGATTCCAACAATCTGGGATTCCAACGCATCTTCCTAGTACATATAATTTGTTTGTGTTTATAAATTTGTTTTTGTTGTTCTGTATTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGTATAAAGAATTGAATATGAATATGAATAGGAATAGAAGTAAAGTTGATATGGGGTTATGTATGTTTAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAGATATATAGATAGATATCGACTTTTATACCGACAGATACTCATTTCTATTTCTAAATTTCAATAACAAACTTCAAATCTTCAAACAATGGAGGGCTCAACTTAGTGCACTATGCCATAATATTTGACTCACTCAAACGGAAGTTCAAGGAGTGGAAGCTTCCAGGGTATATATGAATCAATTACATATGTGGTTTGTTGCATTATTCCAGCTAATTTCTTTAGAGACTAAGTCTAATATCCTCGTATTGTAGCTTGTTTTATGATGTAACGATACTGACCCGACCCAACTCAATCTGGGTGTTAAG

mRNA sequence

CACACCCCAAATTCACAACAACAAATCGCACCTCCAACCACCGATCATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAGATATATAGATAGATATCGACTTTTATACCGACAGATACTCATTTCTATTTCTAAATTTCAATAACAAACTTCAAATCTTCAAACAATGGAGGGCTCAACTTAGTGCACTATGCCATAATATTTGACTCACTCAAACGGAAGTTCAAGGAGTGGAAGCTTCCAGGGTATATATGAATCAATTACATATGTGGTTTGTTGCATTATTCCAGCTAATTTCTTTAGAGACTAAGTCTAATATCCTCGTATTGTAGCTTGTTTTATGATGTAACGATACTGACCCGACCCAACTCAATCTGGGTGTTAAG

Coding sequence (CDS)

ATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAG

Protein sequence

MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCSSAQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR

Homology

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BLAST of Cp4.1LG01g07890 vs. Swiss-Prot
Match: BH111_ARATH (Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.1e-42
Identity = 124/297 (41.75%), Postives = 170/297 (57.24%), Query Frame = 1


Query: 131 NERLLKLSNLVNT-WSIALPS-PDAH--LRHLMDQEPHPLRPTTLLDPDAALDPCASAFF 190
           ++RL KL++LV   WSIA P+ PD +  L H  D +          + D ++       +
Sbjct: 47  DQRLSKLTDLVGKHWSIAPPNNPDMNHNLHHHFDHDHSQ-------NDDISM-------Y 106

Query: 191 RRSLHTPMPAKPFYDNHTA-----------TTRNYGDYISFNPRFAKPLLGVNPSIK--- 250
           R++L         Y+N ++           ++R++ D      R ++PL  +NPS K   
Sbjct: 107 RQALEVKNEEDLCYNNGSSGGGSLFHDPIESSRSFLDI-----RLSRPLTDINPSFKPCF 166

Query: 251 -SFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPAST 310
            + N+S   KK+ Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  
Sbjct: 167 KALNVSEFNKKEHQTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPE 226

Query: 311 KIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYK 370
           K + PK K+ D+ITTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PY+K +S K
Sbjct: 227 K-ELPKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMK 286

Query: 371 DAWQSLERKE--SKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP-YRGCFYR 406
           D W   +R++   +G   ++LRSRGLCLVPIS TP  YR+NS +DYW P YRG  YR
Sbjct: 287 DPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNPTYRGSLYR 319

[Close]

BLAST of Cp4.1LG01g07890 vs. Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 1


Query: 183 SAFFRRSLHTPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSFNLSPQ 242
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   + PQ
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 243 TKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 302
           +  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 303 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLER 362
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPY+K+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 363 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 406
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Cp4.1LG01g07890 vs. Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 6.3e-19
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 1


Query: 262 NEGKKKR---SEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTD 321
           +EGK+     + ++ E  +KK + ++ ++    K++  K K+GDRI  LQQ+VSPFGKTD
Sbjct: 299 SEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVR--KEKLGDRIAALQQLVSPFGKTD 358

Query: 322 TASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQS---LERKESKGEGKMELRSRGL 381
           TASVL E IGYIKFLQ Q++ L+ PY++ +  +    S    + +E   E   +LRSRGL
Sbjct: 359 TASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGL 418

Query: 382 CLVPISCTPQVYRENSGSD 395
           CLVP+SC    Y    G D
Sbjct: 419 CLVPLSC--MTYVTGDGGD 433

[Close]

BLAST of Cp4.1LG01g07890 vs. Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.3e-19
Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 1


Query: 248 SSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTL 307
           SS  + +G G+G  ++  +K  ++      K+ ++ +S   A  +    K ++G+RI  L
Sbjct: 117 SSTKKRTGTGNGQESDQNRKPGKKG-----KRNQEKSSVGIAKVR----KERLGERIAAL 176

Query: 308 QQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYK------DAWQSLERKE 367
           QQ+VSP+GKTD ASVL+E +GYIKFLQ+Q+Q+L +PYL  +S        D   +++ K 
Sbjct: 177 QQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAK- 236

Query: 368 SKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP 399
                  +LRSRGLCLVP+S T  V   N G+D+W+P
Sbjct: 237 -------DLRSRGLCLVPVSSTVHVENSN-GADFWSP 255

[Close]

BLAST of Cp4.1LG01g07890 vs. Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 1


Query: 273 SETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKF 332
           S    KK K    ++ ++ K++  K K+G RI +L Q+VSPFGKTDTASVL+E IGYI+F
Sbjct: 200 SSFANKKPKLQVPSSQSTLKVR--KEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRF 259

Query: 333 LQEQVQLLTNPYLKTNSYKDAWQSLERKESKG---------------------------- 392
           L  Q++ L+ PY  T S  +      ++   G                            
Sbjct: 260 LHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQK 319

Query: 393 -----EGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRG 402
                E   +LRSRGLCLVPISCT QV  +N G+DYW P  G
Sbjct: 320 SNPNEEPMKDLRSRGLCLVPISCTLQVGSDN-GADYWAPAFG 358

[Close]

BLAST of Cp4.1LG01g07890 vs. TrEMBL
Match: A0A0A0KQW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G269890 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 4.1e-142
Identity = 308/477 (64.57%), Postives = 338/477 (70.86%), Query Frame = 1


Query: 1   MADDCTDTSVATS-STPPNWWD---THSHHHHY---------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    H+HHHH+               NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDCSSAQLLPHHASDH-HLWTQVLLNIGNGVE------DIQPNFL 120
           STSSFTNASNH           LLPHH SD+ HLWTQVLLNIGN VE      +I+ NFL
Sbjct: 61  STSSFTNASNH-----------LLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFL 120

Query: 121 EPI---------------ACSDYLKKMDT----NTNWDDTFQTFN----NNNGLLTT--- 180
           E I               ACSDYLKKMDT    N NWDDTFQTFN    NNN LLT+   
Sbjct: 121 ETISSRSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTH 180

Query: 181 -LENERLLKLSNLVNTWSIALPSPDAHLRHL-MDQEPHPLRPTTL-----LDPDAA---- 240
            L+NER LKLSNLVN WSIALP+PD HLRHL MD +   LR +T+     L+PD      
Sbjct: 181 MLQNERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQ 240

Query: 241 -LDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK---- 300
            LDPC S+F RRSL                 +NYGDYISFN R AKP++G+N S      
Sbjct: 241 GLDPCDSSFLRRSLQN---------------QNYGDYISFNGRLAKPVVGINGSSNNPCF 300

Query: 301 --SFNLSPQTKKQIQQISSPTRGSGRGSG-VLNEGKKKRSEESS-ETVTKKAKQDNSTTP 360
             S NLS  +KKQI QI SPTR SGRGSG V NEGKKKRSEESS ET TKKAKQDNST P
Sbjct: 301 KSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNST-P 360

Query: 361 ASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTN 406
           +S KIQQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+NPY+KTN
Sbjct: 361 SSNKIQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSNPYMKTN 420

[Close]

BLAST of Cp4.1LG01g07890 vs. TrEMBL
Match: A0A151SDZ4_CAJCA (Transcription factor bHLH111 family OS=Cajanus cajan GN=KK1_025041 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.9e-86
Identity = 217/459 (47.28%), Postives = 278/459 (60.57%), Query Frame = 1


Query: 1   MADDCTDTSVATSSTPPNWW--------------DTHSHHHHYNSNSSCDDDVSISTSSF 60
           M ++    +VATS TP NWW              +T ++  + NS+SSC++D+S+STS F
Sbjct: 1   MTEESAGNTVATSITPLNWWYLQANSLSSWNETNNTWNNQPNPNSSSSCEEDISVSTS-F 60

Query: 61  TNASNHSALTLDCSSAQLLP-----------HHASDHHLWTQVLLNIGNGVE-----DIQ 120
           TNASNHS+LT++ S   + P           HHASD+ LW+ VL  +G+  E     +I 
Sbjct: 61  TNASNHSSLTVESSRRLIEPPAPSSNELMGEHHASDNQLWSHVLSGVGSNGELHNSQEIG 120

Query: 121 PNFLEPIACS-----------DYLKKMDTNTNWDDTFQTFNNN-----NGLLTTL--ENE 180
            NFL+ ++             DYLKK+DT+  WD +  T  N+     NG    +   NE
Sbjct: 121 ENFLDALSSKSMTSTMCQPVCDYLKKLDTS--WDYSGSTSLNSFEKHLNGFSEAMIENNE 180

Query: 181 RLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHT 240
           RL KLSNLV+TWSIA P P+             LR      P  A +   + F   S   
Sbjct: 181 RLTKLSNLVSTWSIAPPDPEVSSHFDPQTNNMSLRSAGFGRPLNA-NGYQNGFNNLSAGD 240

Query: 241 PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVN---PSIKSFNLSPQTKKQIQQISS 300
                    N ++ TRN+ D ISF+ R  +P++G++   PS+K  N   ++KKQ  Q  S
Sbjct: 241 SCKLYQGLPNLSSCTRNFSDVISFDSRLGRPVIGIHSQKPSMKYLNNVSESKKQGLQAPS 300

Query: 301 PTRGS--GRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTL 360
           P R +  G+G G   E KKKRSEESS+ + KK KQD ST  +S+K+Q PKVK+GD+IT L
Sbjct: 301 PIRTNINGKGEGTTREVKKKRSEESSDAMLKKPKQDASTA-SSSKVQAPKVKLGDKITAL 360

Query: 361 QQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGK 406
           QQIVSPFGKTDTASVL E IGYIKFLQEQVQLL+NPYLK NS+KD W SL+RK+ K E K
Sbjct: 361 QQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANSHKDPWGSLDRKD-KEETK 420

[Close]

BLAST of Cp4.1LG01g07890 vs. TrEMBL
Match: B9S7A5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0775400 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 5.0e-79
Identity = 203/454 (44.71%), Postives = 265/454 (58.37%), Query Frame = 1


Query: 1   MADDCTDTSVA-TSSTPPN---WWDTHSHH-------HHYN--SNSSCDDDVSISTSSFT 60
           MA +C+ +SVA +SSTPP    WWD H HH       H  N  SNSSC++DVS+STS FT
Sbjct: 1   MAQECSGSSVAISSSTPPAVGCWWDLHHHHASSLSPWHQPNPSSNSSCEEDVSMSTS-FT 60

Query: 61  NASNHSALTLDCSSA----------QLLPHHASDHHLWTQVLLNIGNGVE-----DIQPN 120
           NASNHS LT++ S            +L+  HASD  LW+ +LL +G+  E     D+  N
Sbjct: 61  NASNHSGLTVESSRRLVEPAASSPNELIGEHASDSQLWSHILLGVGSNGELQNNQDVGEN 120

Query: 121 FLEPIA------------CSDYLKKMDTNTNWDDTFQTFNNN-NGLLTTLENERLLKLSN 180
            L+ ++              DYLKK+D N  +  +F  F  + NG  T   ++ L++   
Sbjct: 121 LLDALSSRSINSSGIFEPACDYLKKIDHNWEFTSSFNNFEKHINGFSTDHHHQSLIESDQ 180

Query: 181 LVNTWSIALPSPDAHLRHLMDQEP----HPLRPTTLLDPDAALDPCASAFFRRSLHTPMP 240
            V   S  + +   H  H    E     + LR +T  +  A +          S+     
Sbjct: 181 RVTKLSNLVENDHEHQNHHRHVEAPAAGYVLRRSTFNNNGAGVG-YHIGLNNGSVMADNS 240

Query: 241 AKPFYDNHTATTRNYGDYISFNPRFAKPLL---GVNPSIKSFNLSPQTKKQIQQISSPTR 300
              +      + R + D ++FN R  KPL+   G  P  KS NLS   K+ +Q  S   R
Sbjct: 241 KYYYGTTENTSARTFNDGLTFNGRLNKPLIDIQGHKPCFKSLNLSDCRKQGLQASSQTVR 300

Query: 301 GSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 360
           G G  S    EGKKKR E++SET+ KK K ++ST  +S K Q PKVK+GDRIT LQQIVS
Sbjct: 301 GQGNSS----EGKKKRYEDTSETIPKKPKHESSTA-SSVKTQAPKVKLGDRITALQQIVS 360

Query: 361 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGKMELRS 406
           PFGKTDTASVL E I YIKFLQEQVQLL+NPY+K+NS+KD W  L++K ++G+ K++LRS
Sbjct: 361 PFGKTDTASVLLEAIQYIKFLQEQVQLLSNPYMKSNSHKDPWGGLDKK-AQGDAKVDLRS 420

[Close]

BLAST of Cp4.1LG01g07890 vs. TrEMBL
Match: A0A059D678_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02624 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67
Identity = 203/508 (39.96%), Postives = 266/508 (52.36%), Query Frame = 1


Query: 1   MADDCTDTSVA---TSSTPPNWW-DTHS-------------------HHHHYNSNSS--- 60
           MA++C ++SVA   T+  P +WW D H                    HHH+ N +S+   
Sbjct: 1   MAEECAESSVAIDVTAVQPGSWWQDPHGSSISPPPAWINGSSHNPWGHHHNQNPSSNDSP 60

Query: 61  CDDDVSISTSSFTNASNHSALTLDCSSA---------QLLPHHASDHHLWTQVLL----- 120
           CD+ VSIS+S++TN S HS LT++ S           +L+  H SDHHLW  VLL     
Sbjct: 61  CDEAVSISSSAYTNTSIHSGLTVESSGRLLESTSSPNELIGEHLSDHHLWNHVLLVGSGG 120

Query: 121 NIGNGVEDIQPNFLEPIA------------------CSDYLKKMDTNTNWD--------D 180
           ++ N   D+  N L+ ++                  C+++LKK+     WD         
Sbjct: 121 DLHNNQHDVPENLLDSLSSKTLSNLNSFEPPSATSSCNNFLKKL--GNIWDFPNASLSGS 180

Query: 181 TF---QTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTL 240
           TF   Q F++NN            KLSN V+ WSIA P P+ +L       P    P +L
Sbjct: 181 TFMQGQRFSSNN------------KLSNSVSDWSIAPPDPEVNL-------PFDSSPMSL 240

Query: 241 LDPDAALDPCAS-----------------AFFRRS----LHTPMPAKPFYDNHTATTRNY 300
                    C S                 A FRRS        +  + F   +T+   + 
Sbjct: 241 GSSSTCQALCGSPIPRTQYGSELEASVGTALFRRSPSVYSSNNILGEGFGPTNTSMMADN 300

Query: 301 GDYIS---------FNPRFAKPLLG--VNPSIKSFNLSPQTKKQIQQISSPTRGSGRGSG 360
           G Y S         F+     P     +    K+ NLS    K +   S P + S RG G
Sbjct: 301 GRYYSGVTGSLCRGFDDDNTSPSFSSRIGRRFKTLNLSDCKIKPVS--SPPVKASMRGPG 360

Query: 361 VLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDT 406
             +EGKKKRSE+SSE V KK K ++S   +S+K+Q  KVK+GDRIT LQQIVSPFGKTDT
Sbjct: 361 NTSEGKKKRSEDSSEAVAKKPKHESSAV-SSSKMQVTKVKLGDRITALQQIVSPFGKTDT 420

[Close]

BLAST of Cp4.1LG01g07890 vs. TrEMBL
Match: A0A067EI22_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0111931mg PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63
Identity = 167/347 (48.13%), Postives = 212/347 (61.10%), Query Frame = 1


Query: 101 DYLKKMDTNTNWDDTFQT--FNNNN------GLLTTL-ENERLLKLSNLVNTWSIALPSP 160
           DYLKKMD++ NW+ T  +  FNNNN      G+ TT  E ERL KLSNLV+ WSIA P P
Sbjct: 42  DYLKKMDSS-NWEFTTNSSSFNNNNFEKHLNGITTTSGETERLNKLSNLVSHWSIAPPDP 101

Query: 161 DAHLRHLMDQEPHPLRPTTLLD------------------PDAALDPCASAF-------- 220
                      PH + P +  D                   +  L P  S+         
Sbjct: 102 QIG--------PHFINPESTCDNIRNSGLLSYYGHNDFKMENEFLKPFTSSNGFGYNNVG 161

Query: 221 FRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVN----PSIKSFN--LSPQ 280
           F  S  + + A    + +    RN+ D I+ + R +KPL+ ++    P  KS    LS  
Sbjct: 162 FNGSTCSMVEADDGDNKYYYGARNFADAITLSSRLSKPLIDIHIPNKPYFKSSLNLLSEC 221

Query: 281 TKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 340
            KKQ  + SSP R  G+  G+ NEGKKKR EE+SE V KK+K ++ST  ++   + PKVK
Sbjct: 222 KKKQGLRTSSPMRICGKERGISNEGKKKRYEENSEAVVKKSKTESSTASSA---KAPKVK 281

Query: 341 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLER 400
           + D+IT LQQIVSPFGKTDTASVL E IGYIKFLQEQVQLL+NPY+K+N +KD W SL+R
Sbjct: 282 LADKITALQQIVSPFGKTDTASVLYEAIGYIKFLQEQVQLLSNPYMKSNLHKDPWGSLDR 341

Query: 401 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP-YRGCFYR 406
           KE KG+ K++LRSRGLC+VPISCTP+ Y +N+GSDYWTP YRGC YR
Sbjct: 342 KE-KGDVKVDLRSRGLCVVPISCTPKAYHDNNGSDYWTPAYRGCLYR 375

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR10
Match: AT1G31050.1 (AT1G31050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 8.4e-46
Identity = 163/466 (34.98%), Postives = 236/466 (50.64%), Query Frame = 1


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHH--HYNS-----------------NSSCDDD-VS 60
           + ++CT +S        +WW+   HHH  H NS                 N+SC++D +S
Sbjct: 2   LREECTPSS--------SWWEDVQHHHNDHANSISSTSFYHKSSNNNSHANASCEEDNLS 61

Query: 61  ISTSSFTN-------ASNHSALTLD----CSSAQLLPHH--ASDHHLWTQVLLNIGNGVE 120
           +ST   +N       +SNH +L+       SS +LL  H  +S +HLW+   L  G  + 
Sbjct: 62  VSTVRASNRLDLTAESSNHHSLSASNQPASSSDELLRDHVVSSHNHLWSLAFLP-GRSLG 121

Query: 121 DIQPNFLEPIACSDYLKKMDTNT------NWDDTFQTFNNNNGLLTTLENERLLKLSNLV 180
           D   +    IA  +     +  +      N +     ++ N        ++RL KL++LV
Sbjct: 122 DQMMDHHHHIASRNSSTTSELPSFEPACHNGNGNGWIYDPNQVRYDQSSDQRLSKLTDLV 181

Query: 181 NT-WSIALPS-PDAH--LRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHTPMPAK 240
              WSIA P+ PD +  L H  D +          + D ++       +R++L       
Sbjct: 182 GKHWSIAPPNNPDMNHNLHHHFDHDHSQ-------NDDISM-------YRQALEVKNEED 241

Query: 241 PFYDNHTA-----------TTRNYGDYISFNPRFAKPLLGVNPSIK----SFNLSPQTKK 300
             Y+N ++           ++R++ D      R ++PL  +NPS K    + N+S   KK
Sbjct: 242 LCYNNGSSGGGSLFHDPIESSRSFLDI-----RLSRPLTDINPSFKPCFKALNVSEFNKK 301

Query: 301 QIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGD 360
           + Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  K + PK K+ D
Sbjct: 302 EHQTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEK-ELPKAKLRD 361

Query: 361 RITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKE- 406
           +ITTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PY+K +S KD W   +R++ 
Sbjct: 362 KITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWDREDH 421

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR10
Match: AT3G20640.1 (AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 7.7e-23
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 1


Query: 183 SAFFRRSLHTPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSFNLSPQ 242
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   + PQ
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 243 TKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 302
           +  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 303 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLER 362
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPY+K+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 363 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 406
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR10
Match: AT1G49830.1 (AT1G49830.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 7.2e-21
Identity = 60/126 (47.62%), Postives = 80/126 (63.49%), Query Frame = 1


Query: 278 KKAKQDNSTTP-ASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQ 337
           K+ K+D   +   + K++  K K+G++ITTLQ +VSP+GKTD ASVL+ET+GYIKFLQ+Q
Sbjct: 109 KRCKRDQKKSSLGNAKVK--KEKVGEKITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQ 168

Query: 338 VQLLTNPYLKTNSYKDAWQSLERKESKGEGK-----MELRSRGLCLVPISCTPQVYRENS 397
           VQ+L+ PY K N   D        E  GE        ELRS GLCLVP++ T  V   N 
Sbjct: 169 VQVLSTPYFKHNPLDD--------EDTGEVNPTMKVKELRSNGLCLVPLAWTVHVANTN- 223

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR10
Match: AT1G27660.1 (AT1G27660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 3.6e-20
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 1


Query: 262 NEGKKKR---SEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTD 321
           +EGK+     + ++ E  +KK + ++ ++    K++  K K+GDRI  LQQ+VSPFGKTD
Sbjct: 299 SEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVR--KEKLGDRIAALQQLVSPFGKTD 358

Query: 322 TASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQS---LERKESKGEGKMELRSRGL 381
           TASVL E IGYIKFLQ Q++ L+ PY++ +  +    S    + +E   E   +LRSRGL
Sbjct: 359 TASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGL 418

Query: 382 CLVPISCTPQVYRENSGSD 395
           CLVP+SC    Y    G D
Sbjct: 419 CLVPLSC--MTYVTGDGGD 433

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR10
Match: AT3G19500.1 (AT3G19500.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-20
Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 1


Query: 248 SSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTL 307
           SS  + +G G+G  ++  +K  ++      K+ ++ +S   A  +    K ++G+RI  L
Sbjct: 117 SSTKKRTGTGNGQESDQNRKPGKKG-----KRNQEKSSVGIAKVR----KERLGERIAAL 176

Query: 308 QQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYK------DAWQSLERKE 367
           QQ+VSP+GKTD ASVL+E +GYIKFLQ+Q+Q+L +PYL  +S        D   +++ K 
Sbjct: 177 QQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAK- 236

Query: 368 SKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP 399
                  +LRSRGLCLVP+S T  V   N G+D+W+P
Sbjct: 237 -------DLRSRGLCLVPVSSTVHVENSN-GADFWSP 255

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: gi|449445361|ref|XP_004140441.1| (PREDICTED: transcription factor bHLH111 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 5.9e-142
Identity = 308/477 (64.57%), Postives = 338/477 (70.86%), Query Frame = 1


Query: 1   MADDCTDTSVATS-STPPNWWD---THSHHHHY---------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    H+HHHH+               NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDCSSAQLLPHHASDH-HLWTQVLLNIGNGVE------DIQPNFL 120
           STSSFTNASNH           LLPHH SD+ HLWTQVLLNIGN VE      +I+ NFL
Sbjct: 61  STSSFTNASNH-----------LLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFL 120

Query: 121 EPI---------------ACSDYLKKMDT----NTNWDDTFQTFN----NNNGLLTT--- 180
           E I               ACSDYLKKMDT    N NWDDTFQTFN    NNN LLT+   
Sbjct: 121 ETISSRSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTH 180

Query: 181 -LENERLLKLSNLVNTWSIALPSPDAHLRHL-MDQEPHPLRPTTL-----LDPDAA---- 240
            L+NER LKLSNLVN WSIALP+PD HLRHL MD +   LR +T+     L+PD      
Sbjct: 181 MLQNERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQ 240

Query: 241 -LDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK---- 300
            LDPC S+F RRSL                 +NYGDYISFN R AKP++G+N S      
Sbjct: 241 GLDPCDSSFLRRSLQN---------------QNYGDYISFNGRLAKPVVGINGSSNNPCF 300

Query: 301 --SFNLSPQTKKQIQQISSPTRGSGRGSG-VLNEGKKKRSEESS-ETVTKKAKQDNSTTP 360
             S NLS  +KKQI QI SPTR SGRGSG V NEGKKKRSEESS ET TKKAKQDNST P
Sbjct: 301 KSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNST-P 360

Query: 361 ASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTN 406
           +S KIQQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+NPY+KTN
Sbjct: 361 SSNKIQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSNPYMKTN 420

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: gi|659120495|ref|XP_008460218.1| (PREDICTED: transcription factor bHLH111 [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 1.2e-139
Identity = 301/478 (62.97%), Postives = 330/478 (69.04%), Query Frame = 1


Query: 1   MADDCTDTSVATS-STPPNWWD---THSHHHHY---------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    H+HHHH+               NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDCSSAQLLPHHASDH-HLWTQVLLNIGNGVE------DIQPNFL 120
           STSSFTN               LLPHH SD+ HLWTQVLLNIGN VE      DI+ NFL
Sbjct: 61  STSSFTN--------------HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFL 120

Query: 121 E---------------PIACSDYLKKMDT----NTNWDDTFQTFN----NNNGLLTT--- 180
           E               P ACSDYLKKMDT    N NWDDTFQTFN    NNN LLT+   
Sbjct: 121 ETISSRSSMSTTGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQA 180

Query: 181 --LENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTL-----------LDPD 240
             L+NER LKLSNLVN WSIALPSPD HLRHL D +   LR TT+           + P 
Sbjct: 181 HMLQNERFLKLSNLVNRWSIALPSPDPHLRHLTDDQHDHLRATTVPTHEILESADGVVPH 240

Query: 241 AALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK--- 300
             LDPC S+F RR+L                 +NYGDYISFN R AKP++G+N S     
Sbjct: 241 QGLDPCDSSFLRRTLQN---------------QNYGDYISFNGRLAKPMVGINSSSNNPC 300

Query: 301 ---SFNLSPQTKKQIQQISSPTRGSGRGSG-VLNEGKKKRSEESS-ETVTKKAKQDNSTT 360
              S NLS  +KKQI QI SPTR SGRGSG V NEGKKKRSEESS ET TKKAKQDNST 
Sbjct: 301 FKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNST- 360

Query: 361 PASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKT 406
           P S K+QQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+NPY+KT
Sbjct: 361 PYSNKMQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSNPYMKT 420

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: gi|1012341841|gb|KYP53040.1| (Transcription factor bHLH111 family [Cajanus cajan])

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 217/459 (47.28%), Postives = 278/459 (60.57%), Query Frame = 1


Query: 1   MADDCTDTSVATSSTPPNWW--------------DTHSHHHHYNSNSSCDDDVSISTSSF 60
           M ++    +VATS TP NWW              +T ++  + NS+SSC++D+S+STS F
Sbjct: 1   MTEESAGNTVATSITPLNWWYLQANSLSSWNETNNTWNNQPNPNSSSSCEEDISVSTS-F 60

Query: 61  TNASNHSALTLDCSSAQLLP-----------HHASDHHLWTQVLLNIGNGVE-----DIQ 120
           TNASNHS+LT++ S   + P           HHASD+ LW+ VL  +G+  E     +I 
Sbjct: 61  TNASNHSSLTVESSRRLIEPPAPSSNELMGEHHASDNQLWSHVLSGVGSNGELHNSQEIG 120

Query: 121 PNFLEPIACS-----------DYLKKMDTNTNWDDTFQTFNNN-----NGLLTTL--ENE 180
            NFL+ ++             DYLKK+DT+  WD +  T  N+     NG    +   NE
Sbjct: 121 ENFLDALSSKSMTSTMCQPVCDYLKKLDTS--WDYSGSTSLNSFEKHLNGFSEAMIENNE 180

Query: 181 RLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHT 240
           RL KLSNLV+TWSIA P P+             LR      P  A +   + F   S   
Sbjct: 181 RLTKLSNLVSTWSIAPPDPEVSSHFDPQTNNMSLRSAGFGRPLNA-NGYQNGFNNLSAGD 240

Query: 241 PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVN---PSIKSFNLSPQTKKQIQQISS 300
                    N ++ TRN+ D ISF+ R  +P++G++   PS+K  N   ++KKQ  Q  S
Sbjct: 241 SCKLYQGLPNLSSCTRNFSDVISFDSRLGRPVIGIHSQKPSMKYLNNVSESKKQGLQAPS 300

Query: 301 PTRGS--GRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTL 360
           P R +  G+G G   E KKKRSEESS+ + KK KQD ST  +S+K+Q PKVK+GD+IT L
Sbjct: 301 PIRTNINGKGEGTTREVKKKRSEESSDAMLKKPKQDASTA-SSSKVQAPKVKLGDKITAL 360

Query: 361 QQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGK 406
           QQIVSPFGKTDTASVL E IGYIKFLQEQVQLL+NPYLK NS+KD W SL+RK+ K E K
Sbjct: 361 QQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANSHKDPWGSLDRKD-KEETK 420

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: gi|1000959319|ref|XP_015576451.1| (PREDICTED: transcription factor bHLH111 [Ricinus communis])

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 215/474 (45.36%), Postives = 275/474 (58.02%), Query Frame = 1


Query: 1   MADDCTDTSVA-TSSTPPN---WWDTHSHH-------HHYN--SNSSCDDDVSISTSSFT 60
           MA +C+ +SVA +SSTPP    WWD H HH       H  N  SNSSC++DVS+STS FT
Sbjct: 1   MAQECSGSSVAISSSTPPAVGCWWDLHHHHASSLSPWHQPNPSSNSSCEEDVSMSTS-FT 60

Query: 61  NASNHSALTLDCSSA----------QLLPHHASDHHLWTQVLLNIGNGVE-----DIQPN 120
           NASNHS LT++ S            +L+  HASD  LW+ +LL +G+  E     D+  N
Sbjct: 61  NASNHSGLTVESSRRLVEPAASSPNELIGEHASDSQLWSHILLGVGSNGELQNNQDVGEN 120

Query: 121 FLEPIA------------CSDYLKKMDTNTNWDDTFQTFNNN-NGLLTTLENERLL---- 180
            L+ ++              DYLKK+D N  +  +F  F  + NG  T   ++ L+    
Sbjct: 121 LLDALSSRSINSSGIFEPACDYLKKIDHNWEFTSSFNNFEKHINGFSTDHHHQSLIESDQ 180

Query: 181 ---KLSNLVNTWSIALPSPDAHLRH----LMDQEPHPLRPTTLLDPDAALDPCASAFFRR 240
              KLSNLVN WSIA P    +  H    + +   H      +  P A      S F   
Sbjct: 181 RVTKLSNLVNNWSIAPPDLSCYGSHDHVKVENDHEHQNHHRHVEAPAAGYVLRRSTFNNN 240

Query: 241 SL----HTPMP--------AKPFYDNHTATT-RNYGDYISFNPRFAKPLL---GVNPSIK 300
                 H  +         +K +Y     T+ R + D ++FN R  KPL+   G  P  K
Sbjct: 241 GAGVGYHIGLNNGSVMADNSKYYYGTTENTSARTFNDGLTFNGRLNKPLIDIQGHKPCFK 300

Query: 301 SFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK 360
           S NLS   K+ +Q  S   RG G  S    EGKKKR E++SET+ KK K ++ST  +S K
Sbjct: 301 SLNLSDCRKQGLQASSQTVRGQGNSS----EGKKKRYEDTSETIPKKPKHESSTA-SSVK 360

Query: 361 IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKD 406
            Q PKVK+GDRIT LQQIVSPFGKTDTASVL E I YIKFLQEQVQLL+NPY+K+NS+KD
Sbjct: 361 TQAPKVKLGDRITALQQIVSPFGKTDTASVLLEAIQYIKFLQEQVQLLSNPYMKSNSHKD 420

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: gi|223538912|gb|EEF40510.1| (hypothetical protein RCOM_0775400 [Ricinus communis])

HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79
Identity = 203/454 (44.71%), Postives = 265/454 (58.37%), Query Frame = 1


Query: 1   MADDCTDTSVA-TSSTPPN---WWDTHSHH-------HHYN--SNSSCDDDVSISTSSFT 60
           MA +C+ +SVA +SSTPP    WWD H HH       H  N  SNSSC++DVS+STS FT
Sbjct: 1   MAQECSGSSVAISSSTPPAVGCWWDLHHHHASSLSPWHQPNPSSNSSCEEDVSMSTS-FT 60

Query: 61  NASNHSALTLDCSSA----------QLLPHHASDHHLWTQVLLNIGNGVE-----DIQPN 120
           NASNHS LT++ S            +L+  HASD  LW+ +LL +G+  E     D+  N
Sbjct: 61  NASNHSGLTVESSRRLVEPAASSPNELIGEHASDSQLWSHILLGVGSNGELQNNQDVGEN 120

Query: 121 FLEPIA------------CSDYLKKMDTNTNWDDTFQTFNNN-NGLLTTLENERLLKLSN 180
            L+ ++              DYLKK+D N  +  +F  F  + NG  T   ++ L++   
Sbjct: 121 LLDALSSRSINSSGIFEPACDYLKKIDHNWEFTSSFNNFEKHINGFSTDHHHQSLIESDQ 180

Query: 181 LVNTWSIALPSPDAHLRHLMDQEP----HPLRPTTLLDPDAALDPCASAFFRRSLHTPMP 240
            V   S  + +   H  H    E     + LR +T  +  A +          S+     
Sbjct: 181 RVTKLSNLVENDHEHQNHHRHVEAPAAGYVLRRSTFNNNGAGVG-YHIGLNNGSVMADNS 240

Query: 241 AKPFYDNHTATTRNYGDYISFNPRFAKPLL---GVNPSIKSFNLSPQTKKQIQQISSPTR 300
              +      + R + D ++FN R  KPL+   G  P  KS NLS   K+ +Q  S   R
Sbjct: 241 KYYYGTTENTSARTFNDGLTFNGRLNKPLIDIQGHKPCFKSLNLSDCRKQGLQASSQTVR 300

Query: 301 GSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 360
           G G  S    EGKKKR E++SET+ KK K ++ST  +S K Q PKVK+GDRIT LQQIVS
Sbjct: 301 GQGNSS----EGKKKRYEDTSETIPKKPKHESSTA-SSVKTQAPKVKLGDRITALQQIVS 360

Query: 361 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGKMELRS 406
           PFGKTDTASVL E I YIKFLQEQVQLL+NPY+K+NS+KD W  L++K ++G+ K++LRS
Sbjct: 361 PFGKTDTASVLLEAIQYIKFLQEQVQLLSNPYMKSNSHKDPWGGLDKK-AQGDAKVDLRS 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH111_ARATH	9.1e-42	41.75	Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111 PE=2 SV=1	[more]
BH123_ARATH	1.4e-21	36.28	Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1	[more]
BH110_ARATH	6.3e-19	43.17	Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2	[more]
BH113_ARATH	8.3e-19	39.49	Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1	[more]
BH133_ARATH	1.1e-18	38.89	Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g07890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQW5_CUCSA	4.1e-142	64.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G269890 PE=4 SV=1	[more]
A0A151SDZ4_CAJCA	1.9e-86	47.28	Transcription factor bHLH111 family OS=Cajanus cajan GN=KK1_025041 PE=4 SV=1	[more]
B9S7A5_RICCO	5.0e-79	44.71	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0775400 PE=4 SV=1	[more]
A0A059D678_EUCGR	2.0e-67	39.96	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02624 PE=4 SV=1	[more]
A0A067EI22_CITSI	2.2e-63	48.13	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0111931mg PE=4 ...	[more]

BLAST of Cp4.1LG01g07890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31050.1	8.4e-46	34.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	7.7e-23	36.28	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	7.2e-21	47.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	3.6e-20	43.17	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G19500.1	4.7e-20	39.49	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Cp4.1LG01g07890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445361\|ref\|XP_004140441.1\|	5.9e-142	64.57	PREDICTED: transcription factor bHLH111 [Cucumis sativus]	[more]
gi\|659120495\|ref\|XP_008460218.1\|	1.2e-139	62.97	PREDICTED: transcription factor bHLH111 [Cucumis melo]	[more]
gi\|1012341841\|gb\|KYP53040.1\|	2.7e-86	47.28	Transcription factor bHLH111 family [Cajanus cajan]	[more]
gi\|1000959319\|ref\|XP_015576451.1\|	1.2e-81	45.36	PREDICTED: transcription factor bHLH111 [Ricinus communis]	[more]
gi\|223538912\|gb\|EEF40510.1\|	7.1e-79	44.71	hypothetical protein RCOM_0775400 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07890.1	Cp4.1LG01g07890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 299..341 score: 3.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 284..333 score: 1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 299..350 score: 4.97
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 10..405 score: 4.9E
None	No IPR available	PANTHER	PTHR16223:SF32	TRANSCRIPTION FACTOR BHLH111	coord: 10..405 score: 4.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g07890	Cucsa.277250	Cucumber (Gy14) v1	cgycpeB0727
Cp4.1LG01g07890	CmaCh04G009720	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g07890	CmoCh04G010490	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g07890	Cla016925	Watermelon (97103) v1	cpewmB466
Cp4.1LG01g07890	Csa5G269890	Cucumber (Chinese Long) v2	cpecuB452
Cp4.1LG01g07890	MELO3C022574	Melon (DHL92) v3.5.1	cpemeB372
Cp4.1LG01g07890	ClCG11G000750	Watermelon (Charleston Gray)	cpewcgB360
Cp4.1LG01g07890	CSPI05G12140	Wild cucumber (PI 183967)	cpecpiB448
Cp4.1LG01g07890	Lsi11G000360	Bottle gourd (USVL1VR-Ls)	cpelsiB323
Cp4.1LG01g07890	MELO3C022574.2	Melon (DHL92) v3.6.1	cpemedB430
Cp4.1LG01g07890	CsaV3_5G012430	Cucumber (Chinese Long) v3	cpecucB0531
Cp4.1LG01g07890	CsGy5G009320	Cucumber (Gy14) v2	cgybcpeB641
Cp4.1LG01g07890	Carg00089	Silver-seed gourd	carcpeB0938

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None