Cp4.1LG01g07770 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g07770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMajor latex protein, putative
LocationCp4.1LG01 : 5249000 .. 5249462 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTAAATGTTTGTCCAAACTTAATCAAAAAGATTAAAGTTCATAACGGCGACTGGAAGGATCATTGTCATGGCTCGATCAAAGTCTGGAATTACGTTGTTGGTATGTATAATCCGCACCAACTACATTCACTCGTTTATTTTCTTTCAATGACTGATCTCGTTCTTGCTCTTGTTGTTGTTATATGATTTTGTAAGATGATAAGGCTGAAGAGTTGAAAGAACGAGTTGAATTCGACGACAAGAATCTTGTGGTGTGTATGATTGGATTAGAAGGAGATGTGTTCGAGCATTACAAAGTCTTCAAAGCAATATTCAAGTTTGTGCCAAAGGGACCCAATCGCAGCGCCGTAATTCTTATCTTGGAATATGAGAAACTTCACGATGGTCCTCCGTACCCTCACAAGTACCATGATGCGATGCATAAGCTGGCTAAGGATATTGAATCTCACCTTAAATAA

mRNA sequence

ATGTCATTAAAGTTCATAACGGCGACTGGAAGGATCATTGTCATGGCTCGATCAAAGTCTGGAATTACGTTGTTGGCTGAAGAGTTGAAAGAACGAGTTGAATTCGACGACAAGAATCTTGTGGTGTGTATGATTGGATTAGAAGGAGATGTGTTCGAGCATTACAAAGTCTTCAAAGCAATATTCAAGTTTGTGCCAAAGGGACCCAATCGCAGCGCCGTAATTCTTATCTTGGAATATGAGAAACTTCACGATGGTCCTCCGTACCCTCACAAGTACCATGATGCGATGCATAAGCTGGCTAAGGATATTGAATCTCACCTTAAATAA

Coding sequence (CDS)

ATGTCATTAAAGTTCATAACGGCGACTGGAAGGATCATTGTCATGGCTCGATCAAAGTCTGGAATTACGTTGTTGGCTGAAGAGTTGAAAGAACGAGTTGAATTCGACGACAAGAATCTTGTGGTGTGTATGATTGGATTAGAAGGAGATGTGTTCGAGCATTACAAAGTCTTCAAAGCAATATTCAAGTTTGTGCCAAAGGGACCCAATCGCAGCGCCGTAATTCTTATCTTGGAATATGAGAAACTTCACGATGGTCCTCCGTACCCTCACAAGTACCATGATGCGATGCATAAGCTGGCTAAGGATATTGAATCTCACCTTAAATAA

Protein sequence

MSLKFITATGRIIVMARSKSGITLLAEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDGPPYPHKYHDAMHKLAKDIESHLK
BLAST of Cp4.1LG01g07770 vs. Swiss-Prot
Match: ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.2e-10
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KER E DD+N+ V   GLEG V E  KV+  IF+F+ K P+     + + +EK +D 
Sbjct: 67  EVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITMIWEKQNDD 126

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   +  LA D++ H+
Sbjct: 127 MPEPSNYMKFVKSLAADMDDHV 148

BLAST of Cp4.1LG01g07770 vs. TrEMBL
Match: A0A0A0KLB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038750 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.3e-29
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE +KERVEFDDK LVV ++GLEGDVF+HYK F   ++ V KGPNRSA+I  LEYEKLHD
Sbjct: 68  AEVIKERVEFDDKKLVVRVVGLEGDVFKHYKTFTGTYQVVSKGPNRSAIIFTLEYEKLHD 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
           GPPYP KYH+AM+ LAKDIESHLK
Sbjct: 128 GPPYPDKYHEAMNSLAKDIESHLK 151

BLAST of Cp4.1LG01g07770 vs. TrEMBL
Match: A0A0A0KJB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038312 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-26
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE LKERVEFDDKNLVV M+GLEGDVF+HYK F A ++ VPKG  RS +I  LEYEKL+D
Sbjct: 68  AEVLKERVEFDDKNLVVRMVGLEGDVFKHYKTFIATYQVVPKGLGRSVIIFTLEYEKLND 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHL 109
           G PYP KYH+AM  LAKDIE+HL
Sbjct: 128 GSPYPDKYHEAMDNLAKDIEAHL 150

BLAST of Cp4.1LG01g07770 vs. TrEMBL
Match: Q84RN5_MOMCH (Putative major latex protein (Fragment) OS=Momordica charantia GN=mlp PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24
Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KERVEFDDKNL V +IGLEGDVF+HYK F AI+K VPK P  S  +L LEYEKL DG
Sbjct: 39  EVFKERVEFDDKNLSVTLIGLEGDVFKHYKTFNAIYKVVPKSPEHSLAVLTLEYEKLDDG 98

Query: 87  PPYPHKYHDAMHKLAKDIESHLK 110
            PYP++Y D M+ + KDIESHLK
Sbjct: 99  SPYPYQYLDLMNGITKDIESHLK 121

BLAST of Cp4.1LG01g07770 vs. TrEMBL
Match: A0A0A0KIU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G037656 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-24
Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KE+VEFDD+   V +IGLEGDVFEHYK+FK  ++ VPKGP  S  +L LEYEKL+DG
Sbjct: 69  EVFKEQVEFDDEKFAVTLIGLEGDVFEHYKLFKGTYQVVPKGPEHSLAVLTLEYEKLNDG 128

Query: 87  PPYPHKYHDAMHKLAKDIESHLK 110
            PYP+KY D M+ L KDIESHLK
Sbjct: 129 SPYPYKYLDLMNNLTKDIESHLK 151

BLAST of Cp4.1LG01g07770 vs. TrEMBL
Match: A0A0A0KML3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038093 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-23
Identity = 56/84 (66.67%), Postives = 63/84 (75.00%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE  KERVE DDKNLV+ +IGLEGD+FEHYK F   +K V KGP + A+IL LEYEKLHD
Sbjct: 69  AEVFKERVELDDKNLVIKLIGLEGDLFEHYKSFNETYKVVKKGPGQCAIILTLEYEKLHD 128

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
             P P KY+DAM  L K IESHLK
Sbjct: 129 CSPSPQKYYDAMINLVKSIESHLK 152

BLAST of Cp4.1LG01g07770 vs. TAIR10
Match: AT4G14060.1 (AT4G14060.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KER E DD+N+ V  +GLEG V E  KV+  I +F+ K P+     + + +EK  D 
Sbjct: 67  EMFKERREIDDENMAVTFVGLEGHVMEQLKVYDTILQFIQKSPDDIVCKITMTWEKRADD 126

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   +  LA D+++H+
Sbjct: 127 SPEPSNYMKLVKSLAADMDAHV 148

BLAST of Cp4.1LG01g07770 vs. TAIR10
Match: AT2G01520.1 (AT2G01520.1 MLP-like protein 328)

HSP 1 Score: 64.7 bits (156), Expect = 4.0e-11
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KER E DD+N+ V   GLEG V E  KV+  IF+F+ K P+     + + +EK +D 
Sbjct: 67  EVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITMIWEKQNDD 126

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   +  LA D++ H+
Sbjct: 127 MPEPSNYMKFVKSLAADMDDHV 148

BLAST of Cp4.1LG01g07770 vs. TAIR10
Match: AT3G26460.1 (AT3G26460.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           EE KER E DD+N  + ++GLEG V E  KV++  F+F+PK        + + +EK +D 
Sbjct: 68  EEFKERREMDDENNTMKVVGLEGHVMEQLKVYEIDFQFIPKSEEDCICKITMIWEKRNDD 127

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   +  +  D+E H+
Sbjct: 128 FPEPSSYMQLLKSMVIDMEDHV 149

BLAST of Cp4.1LG01g07770 vs. TAIR10
Match: AT3G26450.1 (AT3G26450.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-10
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KER E DD N +V ++GLEG V E +KV++  F+F+P         + + +EK +D 
Sbjct: 68  EVFKERREIDDDNKIVKVVGLEGHVMEQFKVYEIDFQFIPNSEEDCVCKITMIWEKRNDD 127

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   +  +  D+E H+
Sbjct: 128 FPEPSSYMQLLKSMVIDMEDHV 149

BLAST of Cp4.1LG01g07770 vs. TAIR10
Match: AT4G23670.1 (AT4G23670.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-10
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 1

Query: 27  EELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHDG 86
           E  KE+ E DD+N  +   GL+G V EH KVF  I++F+PK  +     + + +EK +D 
Sbjct: 67  EMFKEKREIDDENKTLTKRGLDGHVMEHLKVFDIIYEFIPKSEDSCVCKITMIWEKRNDD 126

Query: 87  PPYPHKYHDAMHKLAKDIESHL 109
            P P  Y   + ++  DIE H+
Sbjct: 127 FPEPSGYMKFVKQMVVDIEGHV 148

BLAST of Cp4.1LG01g07770 vs. NCBI nr
Match: gi|449449056|ref|XP_004142281.1| (PREDICTED: MLP-like protein 328 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 9.0e-29
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE +KERVEFDDK LVV ++GLEGDVF+HYK F   ++ V KGPNRSA+I  LEYEKLHD
Sbjct: 68  AEVIKERVEFDDKKLVVRVVGLEGDVFKHYKTFTGTYQVVSKGPNRSAIIFTLEYEKLHD 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
           GPPYP KYH+AM+ LAKDIESHLK
Sbjct: 128 GPPYPDKYHEAMNSLAKDIESHLK 151

BLAST of Cp4.1LG01g07770 vs. NCBI nr
Match: gi|659098669|ref|XP_008450250.1| (PREDICTED: MLP-like protein 328 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 5.8e-28
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE +KERVEFDDK LV+ ++GLEGDVFEHYK F   ++ +PKGPNRS +I  LEYEKL D
Sbjct: 68  AEVVKERVEFDDKKLVIRIVGLEGDVFEHYKTFIGTYQVIPKGPNRSGIIFTLEYEKLRD 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
           GPPYP KYH+AM+ LAKDIE+HLK
Sbjct: 128 GPPYPQKYHEAMNSLAKDIEAHLK 151

BLAST of Cp4.1LG01g07770 vs. NCBI nr
Match: gi|449449130|ref|XP_004142318.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-26
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE LKERVEFDDKNLVV M+GLEGDVF+HYK F A ++ VPKG  RS +I  LEYEKL+D
Sbjct: 68  AEVLKERVEFDDKNLVVRMVGLEGDVFKHYKTFIATYQVVPKGLGRSVIIFTLEYEKLND 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHL 109
           G PYP KYH+AM  LAKDIE+HL
Sbjct: 128 GSPYPDKYHEAMDNLAKDIEAHL 150

BLAST of Cp4.1LG01g07770 vs. NCBI nr
Match: gi|659098680|ref|XP_008450254.1| (PREDICTED: MLP-like protein 328 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-25
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE  KE+VEFDD+ L V +IGLEGDVFEHYKVFK  ++ VPKGP  S  +L LEYEKL+D
Sbjct: 68  AEVFKEQVEFDDEKLAVTLIGLEGDVFEHYKVFKGTYQVVPKGPEHSLAVLTLEYEKLND 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
           G PYP+KY D M+ L KDIESHLK
Sbjct: 128 GSPYPYKYLDLMNNLTKDIESHLK 151

BLAST of Cp4.1LG01g07770 vs. NCBI nr
Match: gi|659098673|ref|XP_008450252.1| (PREDICTED: MLP-like protein 329 isoform X2 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 6.0e-25
Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = 1

Query: 26  AEELKERVEFDDKNLVVCMIGLEGDVFEHYKVFKAIFKFVPKGPNRSAVILILEYEKLHD 85
           AE  KERVE DDKNLV+ +IGLEGD+FEHYK F   +K V KGP +  +IL L+YEKLHD
Sbjct: 68  AEVFKERVELDDKNLVIKLIGLEGDLFEHYKTFNETYKVVKKGPGQCVIILTLDYEKLHD 127

Query: 86  GPPYPHKYHDAMHKLAKDIESHLK 110
           G PYP KY+DAM KL K +ESHLK
Sbjct: 128 GSPYPQKYYDAMIKLVKSVESHLK 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ML328_ARATH7.2e-1039.02MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLB4_CUCSA6.3e-2973.81Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038750 PE=4 SV=1[more]
A0A0A0KJB3_CUCSA2.2e-2672.29Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038312 PE=4 SV=1[more]
Q84RN5_MOMCH2.7e-2467.47Putative major latex protein (Fragment) OS=Momordica charantia GN=mlp PE=2 SV=1[more]
A0A0A0KIU4_CUCSA6.1e-2465.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G037656 PE=4 SV=1[more]
A0A0A0KML3_CUCSA3.9e-2366.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G038093 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G14060.11.8e-1137.80 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT2G01520.14.0e-1139.02 MLP-like protein 328[more]
AT3G26460.12.0e-1036.59 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT3G26450.13.4e-1035.37 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT4G23670.13.4e-1036.59 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449449056|ref|XP_004142281.1|9.0e-2973.81PREDICTED: MLP-like protein 328 [Cucumis sativus][more]
gi|659098669|ref|XP_008450250.1|5.8e-2870.24PREDICTED: MLP-like protein 328 [Cucumis melo][more]
gi|449449130|ref|XP_004142318.1|3.2e-2672.29PREDICTED: MLP-like protein 34 [Cucumis sativus][more]
gi|659098680|ref|XP_008450254.1|4.6e-2567.86PREDICTED: MLP-like protein 328 [Cucumis melo][more]
gi|659098673|ref|XP_008450252.1|6.0e-2566.67PREDICTED: MLP-like protein 329 isoform X2 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009607response to biotic stimulus
GO:0006952defense response
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR000916Bet_v_I/MLP
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07770.1Cp4.1LG01g07770.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 27..108
score: 3.1
IPR000916Bet v I/Major latex proteinSMARTSM01037Bet_v_1_2coord: 7..109
score: 1.
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 23..108
score: 5.9
NoneNo IPR availablePANTHERPTHR31338FAMILY NOT NAMEDcoord: 27..108
score: 3.9
NoneNo IPR availablePANTHERPTHR31338:SF15F17F8.9-RELATEDcoord: 27..108
score: 3.9
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 29..108
score: 4.45

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g07770Lsi04G011920Bottle gourd (USVL1VR-Ls)cpelsiB361
Cp4.1LG01g07770CsGy5G011260Cucumber (Gy14) v2cgybcpeB638
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g07770Silver-seed gourdcarcpeB0938
Cp4.1LG01g07770Cucumber (Chinese Long) v3cpecucB0533
Cp4.1LG01g07770Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g07770Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g07770Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g07770Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g07770Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g07770Wild cucumber (PI 183967)cpecpiB436
Cp4.1LG01g07770Cucumber (Chinese Long) v2cpecuB429