Cp4.1LG01g07670 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g07670
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaC09g48580D protein
LocationCp4.1LG01 : 5424453 .. 5425280 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTGCTGTGTTTTCTGCTAGATTTGAGAACCTTGCCTCCTCCCATCCTCAGCGGCTTAACGGATGTAAGGCCAGTTTGGATTCAAATTTGTATAAGCTTTCATTTTCGTTCTATCTCCGACTGACGAATCTCACGATTGTGTATTGTGTTCATCTGTTTCTGTTAGTCCTTGTTGCAGCTTGCCAATCTTTATGCTATATCATCATCGTCATCGGCTGGTAGGATCGGATTGTGTTACGTCTTCAAGAATGCGTCCTCTGGTCCTGATGATGCTCTTGTATGGATATGCAAAAACTTTCACTCACGCTCACGCATAGATATAGGCAGGCGCTATTAGAACATAGGCGTTTGAAATTTTTATCCTGATAGATTTCGTTACTTTACTCTTTTCTGAATTGTTTGGCTAATCGAATTTGAAGTTGAAATTGCTCGTTTGTGGTTATGTGTATCCATTACTGAATTAAACAGTTGGAGGTTGCTTACACTCCTAATAGAAGTTTTAGTCTCCGTGACTTCCACCGCGCTGTAGAGAATTTGCCAACCGATGCCTTTATTCCCCAAATTAATGACTACGTAACCGTCTATGGCCGCGGTATCTCCCGTAATAACTACTTTACTGGCATTTCTGTTGAATATTTATTGAATTGAATTTGGCTGCTACCTGATAGATGTGAAATTGTCGGCTGTTTTAAGTGATCAAGTTCTATACTCATGGGGAGGTGAAAATGTGAAGAGGAAAGTGATTGTACTAAGCGCATATGCACACTATGATTTGGATTCCCACCTGGAAAAGACACTTATGGTTGGCCATTTATTTAGCTGA

mRNA sequence

ATGGCGCTGCTGTGTTTTCTGCTAGATTTGAGAACCTTGCCTCCTCCCATCCTCAGCGGCTTAACGGATCTTGCCAATCTTTATGCTATATCATCATCGTCATCGGCTGGTAGGATCGGATTGTGTTACGTCTTCAAGAATGCGTCCTCTGGTCCTGATGATGCTCTTTTGGAGGTTGCTTACACTCCTAATAGAAGTTTTAGTCTCCGTGACTTCCACCGCGCTGTAGAGAATTTGCCAACCGATGCCTTTATTCCCCAAATTAATGACTACGTAACCGTCTATGGCCGCGATGTGAAATTGTCGGCTGTTTTAAGTGATCAAGTTCTATACTCATGGGGAGGTGAAAATGTGAAGAGGAAAGTGATTGTACTAAGCGCATATGCACACTATGATTTGGATTCCCACCTGGAAAAGACACTTATGGTTGGCCATTTATTTAGCTGA

Coding sequence (CDS)

ATGGCGCTGCTGTGTTTTCTGCTAGATTTGAGAACCTTGCCTCCTCCCATCCTCAGCGGCTTAACGGATCTTGCCAATCTTTATGCTATATCATCATCGTCATCGGCTGGTAGGATCGGATTGTGTTACGTCTTCAAGAATGCGTCCTCTGGTCCTGATGATGCTCTTTTGGAGGTTGCTTACACTCCTAATAGAAGTTTTAGTCTCCGTGACTTCCACCGCGCTGTAGAGAATTTGCCAACCGATGCCTTTATTCCCCAAATTAATGACTACGTAACCGTCTATGGCCGCGATGTGAAATTGTCGGCTGTTTTAAGTGATCAAGTTCTATACTCATGGGGAGGTGAAAATGTGAAGAGGAAAGTGATTGTACTAAGCGCATATGCACACTATGATTTGGATTCCCACCTGGAAAAGACACTTATGGTTGGCCATTTATTTAGCTGA

Protein sequence

MALLCFLLDLRTLPPPILSGLTDLANLYAISSSSSAGRIGLCYVFKNASSGPDDALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGENVKRKVIVLSAYAHYDLDSHLEKTLMVGHLFS
BLAST of Cp4.1LG01g07670 vs. TrEMBL
Match: A0A0A0KML4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284490 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56
Identity = 120/150 (80.00%), Postives = 131/150 (87.33%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD--LANLYAISSSSSAGRIGLCYVFKNASSGPDDALLE 60
           MALLCFLLDL TLPPPIL+ LTD  LANLYAISSSSSA RIGLCYV KNAS  PDDALLE
Sbjct: 1   MALLCFLLDLTTLPPPILTALTDVTLANLYAISSSSSAPRIGLCYVLKNASFVPDDALLE 60

Query: 61  VAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGENV 120
           VAY+P R FSL +FHRAV NLPTDAFIP+I+ Y ++  RDVKLSAVLSDQVLYSWG E+V
Sbjct: 61  VAYSPTRCFSLCEFHRAVRNLPTDAFIPEIDGYESLRYRDVKLSAVLSDQVLYSWGCEDV 120

Query: 121 KRKVIVLSAYAHYDLDSHLEKTLMVGHLFS 149
           KRKVIVLSA +HYDLDS+LE+TL VGHLFS
Sbjct: 121 KRKVIVLSASSHYDLDSNLERTLEVGHLFS 150

BLAST of Cp4.1LG01g07670 vs. TrEMBL
Match: A0A061FYX6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014790 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 81/152 (53.29%), Postives = 105/152 (69.08%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPIL----SGLTDLANLYAIS------SSSSAGRIGLCYVFKNASS 60
           M L+CFLLDL +L  P+L      L  LANLY +S      S S   RIGLCYV KN  S
Sbjct: 1   MVLVCFLLDLCSLSSPLLRDLKQSLLQLANLYTVSWNWRNKSDSLGDRIGLCYVIKNRIS 60

Query: 61  GPDDALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVL 120
             D+  L+VAY+P   FSLRDFH AV +LPTD+F P+IND  ++    +KL++VLSDQVL
Sbjct: 61  SSDE--LKVAYSPRVDFSLRDFHHAVNSLPTDSFFPEINDSGSLSCHAMKLASVLSDQVL 120

Query: 121 YSWGGENVKRKVIVLSAYAHYDLDSHLEKTLM 143
           YSWGG+++ RKVIVLS++   ++DS L++TLM
Sbjct: 121 YSWGGKDIMRKVIVLSSFLPENIDSALKETLM 150

BLAST of Cp4.1LG01g07670 vs. TrEMBL
Match: A0A0D2T9Y2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G212000 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPIL----SGLTDLANLYAISSS------SSAGRIGLCYVFKNASS 60
           M L+CFLLDLR+L PP+L      L  +AN Y ISS+      S   RIGLCYV KN  S
Sbjct: 1   MVLVCFLLDLRSLSPPLLRDIKQSLLQMANFYTISSNWRNKLDSLRDRIGLCYVIKNRIS 60

Query: 61  GPDDALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVL 120
             D+  L+VAY P   +SLRDFH AV +LPTD+F P IN+  ++   D+KL++VLSDQVL
Sbjct: 61  SSDE--LKVAYGPRGDYSLRDFHHAVNSLPTDSFSPVINESGSISCYDMKLASVLSDQVL 120

Query: 121 YSWGGENVKRKVIVLSAYAHYDLDSHLEKTL 142
           YSWGG ++ RKVIVLS+     +DS L++TL
Sbjct: 121 YSWGGRDIVRKVIVLSSCLPETIDSALKETL 149

BLAST of Cp4.1LG01g07670 vs. TrEMBL
Match: A0A078ED39_BRANA (BnaC09g48580D protein OS=Brassica napus GN=BnaC09g48580D PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30
Identity = 76/148 (51.35%), Postives = 104/148 (70.27%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLT----DLANLYAISS--SSSAGRIGLCYVFKNASSGPDD 60
           M L+CF+LDLR + P ++  L     +LANL+A+SS   S A RIGLCY+ K+  SG +D
Sbjct: 1   MVLVCFVLDLRNISPSLIGDLKQSFLNLANLHAVSSPVDSLADRIGLCYIQKDPISG-ND 60

Query: 61  ALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWG 120
             L+VAYTP+ +F LRDFH AV +LP DAF+P+I++   +  RD+KLS+VL D+ +YSWG
Sbjct: 61  QQLKVAYTPSGNFCLRDFHHAVNSLPMDAFVPEIDESGAISCRDLKLSSVLCDRAMYSWG 120

Query: 121 GENVKRKVIVLSAYAHYDLDSHLEKTLM 143
           G ++ RKVIVLS+    D+DS    TLM
Sbjct: 121 GRDIMRKVIVLSSCFPEDMDSEARNTLM 147

BLAST of Cp4.1LG01g07670 vs. TrEMBL
Match: A0A0D3EH49_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-30
Identity = 76/148 (51.35%), Postives = 103/148 (69.59%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLT----DLANLYAISS--SSSAGRIGLCYVFKNASSGPDD 60
           M L+CF+LDLR + P ++  L     +LANL+A+SS   S A RIGLCY+ K+  SG D 
Sbjct: 1   MVLVCFVLDLRNISPSLIGDLKQSFLNLANLHAVSSPVDSLADRIGLCYIQKDPISGNDQ 60

Query: 61  ALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWG 120
             L+VAYTP+ +F LRDFH AV +LP DAF+P+I++   +  RD+KLS+VL D+ +YSWG
Sbjct: 61  --LKVAYTPSGNFCLRDFHHAVNSLPMDAFVPEIDESGAISCRDLKLSSVLCDRAMYSWG 120

Query: 121 GENVKRKVIVLSAYAHYDLDSHLEKTLM 143
           G ++ RKVIVLS+    D+DS    TLM
Sbjct: 121 GRDIMRKVIVLSSCFPEDMDSEARNTLM 146

BLAST of Cp4.1LG01g07670 vs. TAIR10
Match: AT5G07380.3 (AT5G07380.3 unknown protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-32
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD----LANLYAISS--SSSAGRIGLCYVFKNASSGPDD 60
           M LLCF++DLR + P ++  L      L+NL+AISS   S   RIGLCY+ K+  SG +D
Sbjct: 1   MVLLCFVVDLRNISPSLIGDLKQSFLKLSNLHAISSPVDSLTDRIGLCYILKDRISG-ND 60

Query: 61  ALLEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWG 120
             L+ AYTP  +F LRDFH A+ +LP DAF+P+I++   +  RD+KLS+VL D+ LYSWG
Sbjct: 61  QQLKFAYTPTGNFCLRDFHHAINSLPLDAFVPEIDESGAISCRDLKLSSVLCDRALYSWG 120

Query: 121 GENVKRKVIVLSAYAHYDLDSHLEKTLM 143
           G ++ RKVIVLS+    D+DS  + TLM
Sbjct: 121 GRDIMRKVIVLSSCFPEDMDSEAKNTLM 147

BLAST of Cp4.1LG01g07670 vs. NCBI nr
Match: gi|700195656|gb|KGN50833.1| (hypothetical protein Csa_5G284490 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 5.3e-56
Identity = 120/150 (80.00%), Postives = 131/150 (87.33%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD--LANLYAISSSSSAGRIGLCYVFKNASSGPDDALLE 60
           MALLCFLLDL TLPPPIL+ LTD  LANLYAISSSSSA RIGLCYV KNAS  PDDALLE
Sbjct: 1   MALLCFLLDLTTLPPPILTALTDVTLANLYAISSSSSAPRIGLCYVLKNASFVPDDALLE 60

Query: 61  VAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGENV 120
           VAY+P R FSL +FHRAV NLPTDAFIP+I+ Y ++  RDVKLSAVLSDQVLYSWG E+V
Sbjct: 61  VAYSPTRCFSLCEFHRAVRNLPTDAFIPEIDGYESLRYRDVKLSAVLSDQVLYSWGCEDV 120

Query: 121 KRKVIVLSAYAHYDLDSHLEKTLMVGHLFS 149
           KRKVIVLSA +HYDLDS+LE+TL VGHLFS
Sbjct: 121 KRKVIVLSASSHYDLDSNLERTLEVGHLFS 150

BLAST of Cp4.1LG01g07670 vs. NCBI nr
Match: gi|778708440|ref|XP_004140472.2| (PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 8.7e-51
Identity = 114/147 (77.55%), Postives = 125/147 (85.03%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD----LANLYAISSSSSAGRIGLCYVFKNASSGPDDAL 60
           MALLCFLLDL TLPPPIL+ LTD    LANLYAISSSSSA RIGLCYV KNAS  PDDAL
Sbjct: 1   MALLCFLLDLTTLPPPILTALTDSLLQLANLYAISSSSSAPRIGLCYVLKNASFVPDDAL 60

Query: 61  --LEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWG 120
             LEVAY+P R FSL +FHRAV NLPTDAFIP+I+ Y ++  RDVKLSAVLSDQVLYSWG
Sbjct: 61  KQLEVAYSPTRCFSLCEFHRAVRNLPTDAFIPEIDGYESLRYRDVKLSAVLSDQVLYSWG 120

Query: 121 GENVKRKVIVLSAYAHYDLDSHLEKTL 142
            E+VKRKVIVLSA +HYDLDS+LE+TL
Sbjct: 121 CEDVKRKVIVLSASSHYDLDSNLERTL 147

BLAST of Cp4.1LG01g07670 vs. NCBI nr
Match: gi|659109608|ref|XP_008454790.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 5.6e-50
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTDLANLYAISSSSSAGRIGLCYVFKNASSGPDDALLEVA 60
           MALLCFLLDLRT PPPIL+ LTDLANLYAISSSSSA RIGLCYV KNAS  P D LLEVA
Sbjct: 1   MALLCFLLDLRTFPPPILTALTDLANLYAISSSSSASRIGLCYV-KNASFVPHDVLLEVA 60

Query: 61  YTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGENVKR 120
           Y+P R FSL  FHRAV NLPTDAFIP+I+ Y T+   DVKLSAVLSDQVLYSW  E+VKR
Sbjct: 61  YSPIRCFSLCQFHRAVRNLPTDAFIPEIDGYETLRCLDVKLSAVLSDQVLYSWECEDVKR 120

Query: 121 KVIVLSAYAHYDLDSHLEKTL 142
           KVIVLSA +HYDLDS+LE+TL
Sbjct: 121 KVIVLSASSHYDLDSNLERTL 140

BLAST of Cp4.1LG01g07670 vs. NCBI nr
Match: gi|659109606|ref|XP_008454789.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X1 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-48
Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD----LANLYAISSSSSAGRIGLCYVFKNASSGPDDAL 60
           MALLCFLLDLRT PPPIL+ LTD    LANLYAISSSSSA RIGLCYV KNAS  P D L
Sbjct: 1   MALLCFLLDLRTFPPPILTALTDSLLQLANLYAISSSSSASRIGLCYV-KNASFVPHDVL 60

Query: 61  LEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGE 120
           LEVAY+P R FSL  FHRAV NLPTDAFIP+I+ Y T+   DVKLSAVLSDQVLYSW  E
Sbjct: 61  LEVAYSPIRCFSLCQFHRAVRNLPTDAFIPEIDGYETLRCLDVKLSAVLSDQVLYSWECE 120

Query: 121 NVKRKVIVLSAYAHYDLDSHLEKTL 142
           +VKRKVIVLSA +HYDLDS+LE+TL
Sbjct: 121 DVKRKVIVLSASSHYDLDSNLERTL 144

BLAST of Cp4.1LG01g07670 vs. NCBI nr
Match: gi|659109610|ref|XP_008454791.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-48
Identity = 111/145 (76.55%), Postives = 120/145 (82.76%), Query Frame = 1

Query: 1   MALLCFLLDLRTLPPPILSGLTD----LANLYAISSSSSAGRIGLCYVFKNASSGPDDAL 60
           MALLCFLLDLRT PPPIL+ LTD    LANLYAISSSSSA RIGLCYV KNAS  P D L
Sbjct: 1   MALLCFLLDLRTFPPPILTALTDSLLQLANLYAISSSSSASRIGLCYV-KNASFVPHDVL 60

Query: 61  LEVAYTPNRSFSLRDFHRAVENLPTDAFIPQINDYVTVYGRDVKLSAVLSDQVLYSWGGE 120
           LEVAY+P R FSL  FHRAV NLPTDAFIP+I+ Y T+   DVKLSAVLSDQVLYSW  E
Sbjct: 61  LEVAYSPIRCFSLCQFHRAVRNLPTDAFIPEIDGYETLRCLDVKLSAVLSDQVLYSWECE 120

Query: 121 NVKRKVIVLSAYAHYDLDSHLEKTL 142
           +VKRKVIVLSA +HYDLDS+LE+TL
Sbjct: 121 DVKRKVIVLSASSHYDLDSNLERTL 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KML4_CUCSA3.7e-5680.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284490 PE=4 SV=1[more]
A0A061FYX6_THECC1.8e-3153.29Uncharacterized protein OS=Theobroma cacao GN=TCM_014790 PE=4 SV=1[more]
A0A0D2T9Y2_GOSRA2.7e-3052.98Uncharacterized protein OS=Gossypium raimondii GN=B456_008G212000 PE=4 SV=1[more]
A0A078ED39_BRANA2.7e-3051.35BnaC09g48580D protein OS=Brassica napus GN=BnaC09g48580D PE=4 SV=1[more]
A0A0D3EH49_BRAOL3.5e-3051.35Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G07380.31.1e-3250.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700195656|gb|KGN50833.1|5.3e-5680.00hypothetical protein Csa_5G284490 [Cucumis sativus][more]
gi|778708440|ref|XP_004140472.2|8.7e-5177.55PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus][more]
gi|659109608|ref|XP_008454790.1|5.6e-5078.72PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo][more]
gi|659109606|ref|XP_008454789.1|3.1e-4876.55PREDICTED: uncharacterized protein LOC103495109 isoform X1 [Cucumis melo][more]
gi|659109610|ref|XP_008454791.1|3.1e-4876.55PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07670.1Cp4.1LG01g07670.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g07670Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g07670Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g07670Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g07670Melon (DHL92) v3.5.1cpemeB368
Cp4.1LG01g07670Melon (DHL92) v3.5.1cpemeB383
Cp4.1LG01g07670Melon (DHL92) v3.6.1cpemedB428
Cp4.1LG01g07670Silver-seed gourdcarcpeB0259