Cp4.1LG01g07410 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g07410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLeguminosin group486 secreted peptide
LocationCp4.1LG01 : 5581744 .. 5582490 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTAAGTTTCTAAAAACTTTTAATGGTTTATAATTTGTATTGCAAGTGTTTGGTCCTTATTTAGAATGTACAAATTTCCCATGCTGACTTTCTCAACAAAAAAACATTAGGTTTCCCCTTACATTTCTCAACAAAAGCAACTATTTTGAGCCTTTTCCATGTCAAGAACTTCATGTATATATACACATACAAATCACAAGAACATGAACTCGTTATCCATCAGACATCAAAAGATAACCAAATAATAGCACTTACTCCTTCGAGTTCAATCAGACAAAAACTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGCCTCTTACTTACGATGTCCTGTCCAATGACAGGTGCAAGTGAAGAACAACAACAACAGGAAAGATCTCTTATTGATATCCCCAAATTTCGTGTCGAAATTCGCAACGGGTTACAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATATATGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA

mRNA sequence

ATGAAGAACTTCATGTATATATACACATACAAATCACAAGAACATGAACTCGTTATCCATCAGACATCAAAAGATAACCAAATAATAGCACTTACTCCTTCGAGTTCAATCAGACAAAAACTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGCCTCTTACTTACGATGTCCTGTCCAATGACAGGTGCAAGTGAAGAACAACAACAACAGGAAAGATCTCTTATTGATATCCCCAAATTTCGTGTCGAAATTCGCAACGGGTTACAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATATATGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA

Coding sequence (CDS)

ATGAAGAACTTCATGTATATATACACATACAAATCACAAGAACATGAACTCGTTATCCATCAGACATCAAAAGATAACCAAATAATAGCACTTACTCCTTCGAGTTCAATCAGACAAAAACTAAACCCTATGGATCGACTTGTATTATTATGGCTCGGCCTCTTACTTACGATGTCCTGTCCAATGACAGGTGCAAGTGAAGAACAACAACAACAGGAAAGATCTCTTATTGATATCCCCAAATTTCGTGTCGAAATTCGCAACGGGTTACAAATGTATATATTGGATAGCCATTGCTTTTCTAAAGACGACGATTTGGGATTACACATACTCTTTCCAGACGATCAACAAAGTTGGTCGTTTAGAGACAATATATGGGGAAGAACATTATTCCATTGTAGATTGGAATGGGAAAGAGGGTTTAAGGAATTTGATGCATTCTTTGTTGATGAGGTTTTCTTTGATGAGTACTGTTCCAACTTTAGGTGCATTTGGATCGCTAAACAAGATGGGATTTATATGTTGAATAAAGCTGGTCAAGAGGTCTTCTATCATCGTTGGAAATTGCTTAGGTTGCCGTGA

Protein sequence

MKNFMYIYTYKSQEHELVIHQTSKDNQIIALTPSSSIRQKLNPMDRLVLLWLGLLLTMSCPMTGASEEQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRWKLLRLP
Homology
[Close]
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34
Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 81  KFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERG 140
           +F VEI N L+M+ILDSHC+SKDDDLGLHILFPD++Q WSF+ N    T FHCRLEWE G
Sbjct: 27  RFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVG 86

Query: 141 FKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRWKLLR 192
           + EFD+F     F   YC N  CIW A+QDG+Y+ N AG++VFY+ W+++R
Sbjct: 87  YLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYWEMIR 137

[Close]
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match: A0A0A0KSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.3e-32
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 47  LVLLWLGLLLTMSCPMTGASEEQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDL 106
           L++L + L L +   M+ A      Q+ S+I +  +++EI N L+MY+LDSHCFSKD+DL
Sbjct: 5   LLVLLIFLFLIVLFDMSMARFSFAPQKSSIIQLHHYQIEIHNDLEMYLLDSHCFSKDNDL 64

Query: 107 GLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWI 166
           GLHILFP + Q WSF+DN +  T F C LEWE G  EFD+F  +  F + +C N  C W 
Sbjct: 65  GLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNNFCGNLTCSWS 124

Query: 167 AKQDGIYMLNKAGQEVFYHRWKLL 191
           A+QDG+Y+ N  G+ VF   W +L
Sbjct: 125 ARQDGVYLTNVKGEYVFQDYWDML 148

[Close]
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match: A0A0A0KIQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-24
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 1 

Query: 46  RLVLLWLGLLLTMSCPMTGASEEQQQQERSLIDIP----------KFRVEIRNGLQMYIL 105
           RL+ L L LLL  S  ++ A +++ + +    D+P          KFRVEI N L MY+L
Sbjct: 5   RLMPLLLVLLLLTSFNVSMAKKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDLNMYLL 64

Query: 106 DSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFD 161
           DS C+SKDD+ GLH+LFPD+QQ+WSF+ N    T FHCRLEWE G+ EFD+F  D  F  
Sbjct: 65  DSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSDPAFVT 124

[Close]
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match: M5VMC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 58/133 (43.61%), Postives = 75/133 (56.39%), Query Frame = 1 

Query: 44  MDRLVLLWLGLLLTMSCPMTGASEEQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKD 103
           +  + +L L LL+ +S         Q Q   SL +  K+RV I NGL    L +HC SKD
Sbjct: 5   LSSISMLLLALLIFLS---------QTQVTYSLFN--KYRVHIINGLTNETLTAHCKSKD 64

Query: 104 DDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRC 163
           DDLG+H L  D + SW FR N + RTL+ C L W  G K FDAF VDE      CS+  C
Sbjct: 65  DDLGVHELAVDQEFSWEFRINFFDRTLYFCNLVWNGGHKTFDAFLVDEKALLNSCSSSDC 124

Query: 164 IWIAKQDGIYMLN 177
           +W A+ DG+Y+ N
Sbjct: 125 MWRARDDGVYLFN 126

[Close]
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match: B9SUI5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 1 

Query: 80  PKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWER 139
           PK+ V + NGL+ ++L +HC S +DDLG+H L P  +Q W+FR NI   T F C L W+ 
Sbjct: 30  PKYHVHVVNGLKKHLLQTHCVSVNDDLGVHDLAPRQEQVWAFRINISFNTRFECTLSWKG 89

Query: 140 GFKEFDAFF--VDEV-FFDEYCSNFRCIWIAKQDGIYMLN 177
           G K FDAF+   D V F  E+C N+ C W A++DGIY+++
Sbjct: 90  GKKRFDAFYPWFDGVNFMREHCVNYNCYWRAQEDGIYLVS 129

[Close]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-13
Identity = 44/142 (30.99%), Postives = 73/142 (51.41%), Query Frame = 1 

Query: 49  LLWLGLLLTMSCPMTGASEEQQQQERSLIDIPKFRVEIRNGLQM-YILDSHCFSKDDDLG 108
           +L +   L ++C     + +   ++  +  I +++V + NGL     L  HC SK++DLG
Sbjct: 8   ILAICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLG 67

Query: 109 LHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIA 168
              L   D+ SW+F +N+   TLF C +  + G      F+ D + F   C    C+W A
Sbjct: 68  DINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDVILFHR-CDWKNCVWTA 127

Query: 169 KQDGIYMLNKA-GQEVFYHRWK 189
           K DG+Y+ N A G++V   +WK
Sbjct: 128 KNDGLYLWNSAIGEDVLSEKWK 148

[Close]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 1 

Query: 79  IPKFRVEIRNGLQM-YILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEW 138
           I +++V + NGL     L  HC SK+DDLG   L   ++ SW+F +N+   T F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 139 ERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKA-GQEVFYHRWKL 190
           + G    + F+ D + F   C    CIW AK DG+Y+ N A G++V   +W++
Sbjct: 98  DNGHMNVNVFWDDVILFHR-CGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 33/84 (39.29%), Postives = 43/84 (51.19%), Query Frame = 1 

Query: 95  LDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFF 154
           L+ HC S DDDLGL IL P+   S+ FR +I G TLF+C   W    K FD +  D    
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 155 DEYCSNFRCIWIAKQDGIYMLNKA 179
             + S   CIW     G  M +++
Sbjct: 111 RSHISCINCIWDISIQGPCMFSES 134

[Close]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1 

Query: 78  DIPKFRVEIRNGLQ-MYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLE 137
           +I + +V + N L+   +L  HC SKDDDLG HIL       ++F DNIW  T F C+++
Sbjct: 23  EIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMD 82

Query: 138 WERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIY 174
               FK    F   E  + +      C WI ++DGIY
Sbjct: 83  QGPNFKHHLDFVAYETSWSK-ALEASCKWIGREDGIY 118

[Close]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10
Identity = 42/121 (34.71%), Postives = 57/121 (47.11%), Query Frame = 1 

Query: 69  QQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGR 128
           QQ  E   I  P  R+ ++N    Y+L  HC SKDDDLG HI    +   W F  N    
Sbjct: 34  QQDGEPFPIRGPLTRITVKNNND-YLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNS 93

Query: 129 TLFHCRLEWERGFKEFDAFFVDEVFFDEY-CSNFRCIWIAKQDGIYMLNKAGQEV-FYHR 188
           TL+ C   + +G      F +D    D Y C N  C W AK+D +Y  +   Q V ++ +
Sbjct: 94  TLYFC--GFSQGQDNKGVFDIDRAERDFYRCRN--CTWNAKKDSLYGYSNLPQTVTWFFK 149

[Close]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match: gi|700194417|gb|KGN49594.1| (hypothetical protein Csa_5G016040 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 81  KFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERG 140
           +F VEI N L+M+ILDSHC+SKDDDLGLHILFPD++Q WSF+ N    T FHCRLEWE G
Sbjct: 27  RFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIATTSFHCRLEWEVG 86

Query: 141 FKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRWKLLR 192
           + EFD+F     F   YC N  CIW A+QDG+Y+ N AG++VFY+ W+++R
Sbjct: 87  YLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYWEMIR 137

[Close]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 4.8e-33
Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 1 

Query: 68  EQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWG 127
           E  +    L+   KF + I N LQMY+LDSHC+SKDDDLG  +L+P+D+QSWSFR N  G
Sbjct: 16  ELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWSFRGNWLG 75

Query: 128 RTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRW 187
            T FHC+LEWE G+ EFDAF  D  F   +C+   C W A+QDG+Y+ N+ GQ VF   W
Sbjct: 76  TTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQNGQVVFNQNW 135

Query: 188 KLLR 192
           +++R
Sbjct: 136 EMIR 139

[Close]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match: gi|700196255|gb|KGN51432.1| (hypothetical protein Csa_5G538550 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 9.0e-32
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 47  LVLLWLGLLLTMSCPMTGASEEQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDL 106
           L++L + L L +   M+ A      Q+ S+I +  +++EI N L+MY+LDSHCFSKD+DL
Sbjct: 5   LLVLLIFLFLIVLFDMSMARFSFAPQKSSIIQLHHYQIEIHNDLEMYLLDSHCFSKDNDL 64

Query: 107 GLHILFPDDQQSWSFRDNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWI 166
           GLHILFP + Q WSF+DN +  T F C LEWE G  EFD+F  +  F + +C N  C W 
Sbjct: 65  GLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNNFCGNLTCSWS 124

Query: 167 AKQDGIYMLNKAGQEVFYHRWKLL 191
           A+QDG+Y+ N  G+ VF   W +L
Sbjct: 125 ARQDGVYLTNVKGEYVFQDYWDML 148

[Close]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match: gi|659134192|ref|XP_008467075.1| (PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 1 

Query: 76  LIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLFHCRL 135
           L+    FRVEI N L  YILDS C+SKDDDLGLH L+P++QQ+WSF+ N    T FHC+L
Sbjct: 33  LVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYPNEQQNWSFKGNWIATTDFHCKL 92

Query: 136 EWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEVFYHRWKLLR 192
           EWE  + EFD+F  D  F   YC N  CIW A+QDG+Y+ N  GQ+VFY  W++L+
Sbjct: 93  EWEIAYLEFDSFKSDPDFVTNYCGNRTCIWSARQDGVYLNNAVGQQVFYDYWEMLK 148

[Close]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match: gi|659105279|ref|XP_008453057.1| (PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-30
Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 72  QERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFRDNIWGRTLF 131
           Q+ S+I +  ++V+I N L+MY+LDSHCFSKD+DLGLHILFP +QQ WSF DNI+  T F
Sbjct: 11  QKPSIIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFETTKF 70

Query: 132 HCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLN 177
            CRLEWE G  EFD+F  D  F + +C N  C W AKQDG+Y+ N
Sbjct: 71  RCRLEWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTN 115

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g07410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g07410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL79_CUCSA1.4e-3459.46Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1[more]
A0A0A0KSN2_CUCSA6.3e-3246.53Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1[more]
A0A0A0KIQ4_CUCSA4.8e-2448.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1[more]
M5VMC1_PRUPE1.2e-1943.61Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1[more]
B9SUI5_RICCO1.4e-1847.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1[more]
BLAST of Cp4.1LG01g07410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29035.17.6e-1330.99 Plant self-incompatibility protein S1 family[more]
AT4G16295.11.3e-1235.40 S-protein homologue 1[more]
AT5G12060.12.1e-1039.29 Plant self-incompatibility protein S1 family[more]
AT5G04350.12.1e-1037.11 Plant self-incompatibility protein S1 family[more]
AT5G06020.13.6e-1034.71 Plant self-incompatibility protein S1 family[more]
BLAST of Cp4.1LG01g07410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194417|gb|KGN49594.1|1.9e-3459.46hypothetical protein Csa_5G016040 [Cucumis sativus][more]
gi|659105271|ref|XP_008453055.1|4.8e-3351.61PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo][more]
gi|700196255|gb|KGN51432.1|9.0e-3246.53hypothetical protein Csa_5G538550 [Cucumis sativus][more]
gi|659134192|ref|XP_008467075.1|1.2e-3155.17PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo][more]
gi|659105279|ref|XP_008453057.1|2.2e-3058.10PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07410.1Cp4.1LG01g07410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 83..187
score: 1.7
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 42..193
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g07410Cucumber (Chinese Long) v3cpecucB0529
Cp4.1LG01g07410Wax gourdcpewgoB0553
Cp4.1LG01g07410Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g07410Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g07410Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g07410Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g07410Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g07410Wild cucumber (PI 183967)cpecpiB424
Cp4.1LG01g07410Bottle gourd (USVL1VR-Ls)cpelsiB361
Cp4.1LG01g07410Watermelon (Charleston Gray)cpewcgB409
Cp4.1LG01g07410Melon (DHL92) v3.5.1cpemeB431
Cp4.1LG01g07410Melon (DHL92) v3.6.1cpemedB422
Cp4.1LG01g07410Melon (DHL92) v3.6.1cpemedB502
Cp4.1LG01g07410Silver-seed gourdcarcpeB0938