Cp4.1LG01g07400 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g07400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Plant self-incompatibility protein S1 family
Location	Cp4.1LG01 : 5579884 .. 5580357 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

mRNA sequence

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

Coding sequence (CDS)

ATGCGACGGCTACCACTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGGTGTCCTTGACCATGTCGGTGGCCTCGAAAAAGAAGGCAGAAACAGGGCCCGAGCAGCCAGATCCGAACCAACCTGCCATAGCCCTACGCAAGTTTGATGTTCATATACGCAATGGGCTGCGAATGTACTTGTTGGACAGCCATTGCTGCTCCAAAGACGACGATTTGGGGGTGCATGTTGTATACCCAGACGATGAACAAAGCTGGTCGTTCAGAGGGAACTGGCTTGGATCCACCAATTTTCATTGCAAGTTGGAGTGGGCTTATGGGTTCGTGGAATTTGATGCTTTTGCTGATGATCTAAACTTTGTCACCACCTTTTGTGGGGATTCTTCCTGTGTTTGGACTGCAAAACAAGATGGGGTTTATTTGGCCGACCAAAATGGTCAACTTGTTTTTAAGGATCATTGGGAAATGCTTCCATGA

Protein sequence

MRRLPLLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP

Homology

[Close]

BLAST of Cp4.1LG01g07400 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40
Identity = 69/135 (51.11%), Postives = 101/135 (74.81%), Query Frame = 1


Query: 25  SKKKAETGPEQPD---PNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDD 84
           +KKKA+     P    PN P +   +F V I N LRM++LDSHC SKDDDLG+H+++PD+
Sbjct: 2   AKKKAKNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDE 61

Query: 85  EQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLA 144
           +Q WSF+GNW+ +T+FHC+LEW  G++EFD+F    +FVT +CG+ +C+W+A+QDGVYL 
Sbjct: 62  KQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLN 121

Query: 145 DQNGQLVFKDHWEML 157
           +  G+ VF ++WEM+
Sbjct: 122 NAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG01g07400 vs. TrEMBL
Match: A0A0A0KIQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31
Identity = 69/126 (54.76%), Postives = 91/126 (72.22%), Query Frame = 1


Query: 2   RRLPLLLLLLLLLHLVSLTMSVASKKKAETG---PEQPDPNQPAIALRKFDVHIRNGLRM 61
           R +PLLL+LLLL    S  +S+A KKKA++    P+ PDPN P ++  KF V I N L M
Sbjct: 5   RLMPLLLVLLLL---TSFNVSMAKKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDLNM 64

Query: 62  YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLN 121
           YLLDS C SKDD+ G+HV++PD++Q+WSF+GNW  +T FHC+LEW  G++EFD+F  D  
Sbjct: 65  YLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSDPA 124

Query: 122 FVTTFC 125
           FVT FC
Sbjct: 125 FVTDFC 127

[Close]

BLAST of Cp4.1LG01g07400 vs. TrEMBL
Match: A0A0A0KSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.7e-31
Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = 1


Query: 6   LLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHC 65
           LL+LL+ L  +V   MS+A   +    P++       I L  + + I N L MYLLDSHC
Sbjct: 5   LLVLLIFLFLIVLFDMSMA---RFSFAPQKSS----IIQLHHYQIEIHNDLEMYLLDSHC 64

Query: 66  CSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCG 125
            SKD+DLG+H+++P + Q WSF+ N   +T F C LEW  G +EFD+F  + NF+  FCG
Sbjct: 65  FSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNNFCG 124

Query: 126 DSSCVWTAKQDGVYLADQNGQLVFKDHWEML 157
           + +C W+A+QDGVYL +  G+ VF+D+W+ML
Sbjct: 125 NLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]

BLAST of Cp4.1LG01g07400 vs. TrEMBL
Match: B9SUI5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-18
Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1


Query: 47  KFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYG 106
           K+ VH+ NGL+ +LL +HC S +DDLGVH + P  EQ W+FR N   +T F C L W  G
Sbjct: 31  KYHVHVVNGLKKHLLQTHCVSVNDDLGVHDLAPRQEQVWAFRINISFNTRFECTLSWKGG 90

Query: 107 FVEFDAF---ADDLNFVTTFCGDSSCVWTAKQDGVYL-ADQNGQLVFK 151
              FDAF    D +NF+   C + +C W A++DG+YL + QN +   K
Sbjct: 91  KKRFDAFYPWFDGVNFMREHCVNYNCYWRAQEDGIYLVSSQNRRYTLK 138

[Close]

BLAST of Cp4.1LG01g07400 vs. TrEMBL
Match: M5VMC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.2e-18
Identity = 50/109 (45.87%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 47  KFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYG 106
           K+ VHI NGL    L +HC SKDDDLGVH +  D E SW FR N+   T + C L W  G
Sbjct: 31  KYRVHIINGLTNETLTAHCKSKDDDLGVHELAVDQEFSWEFRINFFDRTLYFCNLVWNGG 90

Query: 107 FVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLAD-QNGQLVFKDHWE 155
              FDAF  D   +   C  S C+W A+ DGVYL +  + Q   K  WE
Sbjct: 91  HKTFDAFLVDEKALLNSCSSSDCMWRARDDGVYLFNYPHKQYRLKYQWE 139

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 67.4 bits (163), Expect = 9.0e-12
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 1


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK+DDLG   +   +  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQ-NGQLVFKDHWEM 156
             G +  + F DD+  +   CG  +C+WTAK DG+YL +  +G+ V    WE+
Sbjct: 98  DNGHMNVNVFWDDV-ILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 1


Query: 45  LRKFDVHIRNGLRM-YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEW 104
           + ++ V + NGL     L  HC SK++DLG   +   D  SW+F  N L ST F C +  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 105 AYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQN-GQLVFKDHWE 155
             G +    F DD+  +   C   +CVWTAK DG+YL +   G+ V  + W+
Sbjct: 98  DDGHMNVKVFWDDV-ILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 57.8 bits (138), Expect = 7.1e-09
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 1


Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           L+ HC S DDDLG+ ++ P+   S+ FR + +G+T F+C   W      FD + DD + V
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGV 110

Query: 121 TTFCGDSSCVWTAKQDG 138
            +     +C+W     G
Sbjct: 111 RSHISCINCIWDISIQG 127

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 54.7 bits (130), Expect = 6.0e-08
Identity = 31/77 (40.26%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 61  LDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFV 120
           L  HC SK DDLG+HVV    E  + F+ N   ST F C  +W   F  FD +  D    
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIY--DAQRD 101

Query: 121 TTFCGDSSCVWTAKQDG 138
              C D  C W  K DG
Sbjct: 102 QGICDD--CQWEIKPDG 114

[Close]

BLAST of Cp4.1LG01g07400 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 54.3 bits (129), Expect = 7.9e-08
Identity = 30/99 (30.30%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 60  LLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFV-EFDAFADDLN 119
           LL  HC SKDDDLG H++    +  ++F  N   +T+F C+++    F    D  A + +
Sbjct: 40  LLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 99

Query: 120 FVTTFCGDSSCVWTAKQDGVYLADQNGQLVFKDHWEMLP 158
           +      ++SC W  ++DG+Y + Q+G    K + + +P
Sbjct: 100 WSKAL--EASCKWIGREDGIYFS-QDGVPPTKKYQDGVP 135

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-50
Identity = 85/130 (65.38%), Postives = 106/130 (81.54%), Query Frame = 1


Query: 27  KKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQSWS 86
           K  ETGPE P P++P +   KF++ I N L+MYLLDSHC SKDDDLG  V+YP+DEQSWS
Sbjct: 9   KSQETGPELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSWS 68

Query: 87  FRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQNGQ 146
           FRGNWLG+TNFHCKLEW  G++EFDAF++D+ F+T FC  SSC W+A+QDGVYL +QNGQ
Sbjct: 69  FRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQNGQ 128

Query: 147 LVFKDHWEML 157
           +VF  +WEM+
Sbjct: 129 VVFNQNWEMI 138

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: gi|700194417|gb|KGN49594.1| (hypothetical protein Csa_5G016040 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40
Identity = 69/135 (51.11%), Postives = 101/135 (74.81%), Query Frame = 1


Query: 25  SKKKAETGPEQPD---PNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDD 84
           +KKKA+     P    PN P +   +F V I N LRM++LDSHC SKDDDLG+H+++PD+
Sbjct: 2   AKKKAKNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDE 61

Query: 85  EQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLA 144
           +Q WSF+GNW+ +T+FHC+LEW  G++EFD+F    +FVT +CG+ +C+W+A+QDGVYL 
Sbjct: 62  KQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLN 121

Query: 145 DQNGQLVFKDHWEML 157
           +  G+ VF ++WEM+
Sbjct: 122 NAAGEQVFYNYWEMI 136

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: gi|659134192|ref|XP_008467075.1| (PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.8e-39
Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 1


Query: 25  SKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVHVVYPDDEQS 84
           S K     P+ P PN P ++   F V I N L  Y+LDS C SKDDDLG+H +YP+++Q+
Sbjct: 16  SPKNRVPKPDLPLPNNPLVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYPNEQQN 75

Query: 85  WSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCGDSSCVWTAKQDGVYLADQN 144
           WSF+GNW+ +T+FHCKLEW   ++EFD+F  D +FVT +CG+ +C+W+A+QDGVYL +  
Sbjct: 76  WSFKGNWIATTDFHCKLEWEIAYLEFDSFKSDPDFVTNYCGNRTCIWSARQDGVYLNNAV 135

Query: 145 GQLVFKDHWEML 157
           GQ VF D+WEML
Sbjct: 136 GQQVFYDYWEML 147

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: gi|700194418|gb|KGN49595.1| (hypothetical protein Csa_5G017790 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-31
Identity = 69/126 (54.76%), Postives = 91/126 (72.22%), Query Frame = 1


Query: 2   RRLPLLLLLLLLLHLVSLTMSVASKKKAETG---PEQPDPNQPAIALRKFDVHIRNGLRM 61
           R +PLLL+LLLL    S  +S+A KKKA++    P+ PDPN P ++  KF V I N L M
Sbjct: 5   RLMPLLLVLLLL---TSFNVSMAKKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDLNM 64

Query: 62  YLLDSHCCSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLN 121
           YLLDS C SKDD+ G+HV++PD++Q+WSF+GNW  +T FHC+LEW  G++EFD+F  D  
Sbjct: 65  YLLDSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSDPA 124

Query: 122 FVTTFC 125
           FVT FC
Sbjct: 125 FVTDFC 127

[Close]

BLAST of Cp4.1LG01g07400 vs. NCBI nr
Match: gi|700196255|gb|KGN51432.1| (hypothetical protein Csa_5G538550 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30
Identity = 68/151 (45.03%), Postives = 98/151 (64.90%), Query Frame = 1


Query: 6   LLLLLLLLLHLVSLTMSVASKKKAETGPEQPDPNQPAIALRKFDVHIRNGLRMYLLDSHC 65
           LL+LL+ L  +V   MS+A   +    P++       I L  + + I N L MYLLDSHC
Sbjct: 5   LLVLLIFLFLIVLFDMSMA---RFSFAPQKSS----IIQLHHYQIEIHNDLEMYLLDSHC 64

Query: 66  CSKDDDLGVHVVYPDDEQSWSFRGNWLGSTNFHCKLEWAYGFVEFDAFADDLNFVTTFCG 125
            SKD+DLG+H+++P + Q WSF+ N   +T F C LEW  G +EFD+F  + NF+  FCG
Sbjct: 65  FSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNNFCG 124

Query: 126 DSSCVWTAKQDGVYLADQNGQLVFKDHWEML 157
           + +C W+A+QDGVYL +  G+ VF+D+W+ML
Sbjct: 125 NLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g07400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL79_CUCSA	1.0e-40	51.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1	[more]
A0A0A0KIQ4_CUCSA	1.5e-31	54.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1	[more]
A0A0A0KSN2_CUCSA	9.7e-31	45.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1	[more]
B9SUI5_RICCO	2.5e-18	44.44	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0573340 PE=4 SV=1	[more]
M5VMC1_PRUPE	7.2e-18	45.87	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g07400 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	9.0e-12	36.28	S-protein homologue 1	[more]
AT4G29035.1	2.9e-10	35.71	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	7.1e-09	33.77	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	6.0e-08	40.26	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	7.9e-08	30.30	Plant self-incompatibility protein S1 family	[more]

BLAST of Cp4.1LG01g07400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105271\|ref\|XP_008453055.1\|	4.6e-50	65.38	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]
gi\|700194417\|gb\|KGN49594.1\|	1.5e-40	51.11	hypothetical protein Csa_5G016040 [Cucumis sativus]	[more]
gi\|659134192\|ref\|XP_008467075.1\|	2.8e-39	53.03	PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo]	[more]
gi\|700194418\|gb\|KGN49595.1\|	2.1e-31	54.76	hypothetical protein Csa_5G017790 [Cucumis sativus]	[more]
gi\|700196255\|gb\|KGN51432.1\|	1.4e-30	45.03	hypothetical protein Csa_5G538550 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07400.1	Cp4.1LG01g07400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 50..149 score: 6.8
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 47..146 score: 3.6
None	No IPR available	PANTHER	PTHR31232:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED	coord: 47..146 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g07400	Wax gourd	cpewgoB0553
Cp4.1LG01g07400	Cucurbita pepo (Zucchini)	cpecpeB374
Cp4.1LG01g07400	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g07400	Cucurbita maxima (Rimu)	cmacpeB722
Cp4.1LG01g07400	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g07400	Cucurbita moschata (Rifu)	cmocpeB674
Cp4.1LG01g07400	Wild cucumber (PI 183967)	cpecpiB424
Cp4.1LG01g07400	Bottle gourd (USVL1VR-Ls)	cpelsiB361
Cp4.1LG01g07400	Watermelon (Charleston Gray)	cpewcgB409
Cp4.1LG01g07400	Melon (DHL92) v3.5.1	cpemeB431
Cp4.1LG01g07400	Melon (DHL92) v3.6.1	cpemedB422
Cp4.1LG01g07400	Melon (DHL92) v3.6.1	cpemedB502
Cp4.1LG01g07400	Silver-seed gourd	carcpeB0938
Cp4.1LG01g07400	Cucumber (Chinese Long) v3	cpecucB0529