Cp4.1LG01g06590 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g06590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CCCH-type zinc finger family protein, putative
Location	Cp4.1LG01 : 24209 .. 35073 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTTAGTGGACAAAATTTGAAATATTAAGAACCATAAAATGAACTCTTTGAAAGTAGAGGGACCAAAGTAGAGAATATAAGAAAGTAAAAGGATTTGAAGTGAAAAAAAGGAGAAAGAGAATAAAGGTCCTTTTCCATGGTCTTAGTAGAAGACGAAATAGCTGAAGATGCAGAGGCAGAGAACGGTTCAGTGTACAGATGAATTGAAGCAGCGCGCGCACACACACACACACACATGCTTGTTGCCTTATCTCTCAGTCTCATAGCGGAAGTGATGGAACTTCCCTTCACTCCTCTTCCTCTTTCTGAGCTTTGACCATGAAATCTCAATCTCCACCCATTAATTCCCTCCACAACCCACTCTTCTGAACTCGCCTTTGCGCGAAGGCTTGTAGCATTGCTCGAAATCCCTTCGTTTCTTCTCCTTCTGCTAATCCCAGACGACGAATTTATTTCATGGACTACGAGAGGATCCAGAAGCCTCAGGTTTTTGCTTCGTTCTCTTCTGTTTCTCTCTCTTCTCGCTGCCTGTATTTCCATGACCCATCATGAGGGGACGATGCAGAGTTACCGAGGAATTGATTTGTATTTTCATGTTCGTTTTTCTTTTATGCTTGTGTTGTCTTGTGTTGTTATCTGATGACTTCATTTTCGGCAGGCTGCCGGTGGAGGGGGGTTTTCGCCCGGGAAGCTTAGGAATATGCTGCTTGGGTTGGAGAAAAAGAGGAAGGAAGAGGAGGAAGAGCTTGGATCCACTTACGACTTGAGATCTCAACCTTTGCCGATCGATGAAGCTGGTAAGCTGAAAATGTTAAGGATTTGTTTTCTATGAAGTTTCATTTTGACCCTCGAACGGATTGGATGCTCTGAAGGCTCCAAATAGAAAAAAAATGGAAATTAAAGCTTCCATAAGAGGTAGAAGTACTAAAGACCCCAGAGAGGGCCGTTAGGAAGCCCTACTGTCTCTGTATAACACTTATCCAGAGGTCGCGATGTCGAATCATTGAGTGTAATGAGGAAAACTTAATGTCTCTGAAGTACCGTTAAAGAGGGCGTAAGAAAGTGGTGCTTTTAGCCAGCTAAAGAGGGCGTAATATCTCCCATGTTTCCATATATCTTTTAGCTAACAAGTTCCTGTTAACTCATGTCTATTCCAGACAAAATGATGCATTATTCTCCCATTTTCAATGTTCAGATGTCTGCTTCACTAAGAGAAAAGGCTTGATCTTTTGTACTTCTTTACGTTGTTGCTTCTTGAGGTGCTATTTACAAGGATATATAGTTTATAAGTGAAATGCACATGATTTAAACTGAACTTCTGAATTTTACAGTGAGTGAGTATCCTGTTTTATTGAAGTTGAGATGTTTTTAATAGGCACTAGCGGATCTGATATTTGCAAAGATGTGGATGTGGTCAGTGTCCTTCCAGAATGCTCGACTTCAAAAAAGGCTGATTCACTGGACTCGGAGATGATTAATGAGCACAGGTTGAAGGACAACACTCATAATTCACGACTTAGGATGCAGGACGAGCCTTCTCTAGATTATGATAGTGGACAGGATGCTTCCACTCTGCTCACTTCAACCTTTGAGTTCCAGAAGTCAGAGAGGTCCACACGAGTTACCCTGGGGCCCTTCTCTAAGCCAGCACCATCCAAATGGGATGATGCTCAGAAATGGATCGCAAGCCCTACCTCAAATAGACCCAAAACAGGGCAATCTCAGATGCAGGCTGGACATCTTTTTGGATCACGAAAATTAGGTATTGGTATTGGGAATCGTCAACCATCTCTGAAGATCGTGGTTGAGGTTCCAGATCGGAAAGTGGCTGCTTTTGAAGAACCAGATACAAAGCAGATTGATAGTGAAGCTAACTTTGGAAGTGTTGCCCAGAAGTTTGTTACTTGGGATGCTAATCCATACACAGTAGCAGATACACATGGCAAGCCTATGTTGATGATTGAGAACTCTGTTGGAGAGTCAGCAAGTAAGAAGATGTAGTTCTTAATAAATTTTGGTCTTACAGTATTCTTAACTGTTATCTCATTAGTCTAGCCAGGAAATGGCCGTTAAAGATTTAGTTGTTAACTCTCATATTTATAGATTAAAGGTTTCCAGAACTTTTACAATATTTGGCCTTTATTGTTAAATTATCTTTCTGGTGGTTATGGCATGTAGCATGCTTTCGGGACTATTTTGCAGAATAAATTATGAATCACCAACTTAAATAAGGAAATGCTAGGAAGGCTTTCAAATATGTTCGTACTCTAATTCTTGGACTTCGAAGTTGGAAATGAGTACCCAAAAATGAACTGGTAGTTGTTTCTTTACATTTGGTAGTTTTATCCGCAATATTTTGGCTATCCATTTCTCTGCTCTACTGAATTTGTAGTTACAGATTGATCATTTTGAACTCCTCTCATGTACCTTCTCTTGGACTGCTTGTAAAGTTTATGTACTTTAATGAATCTGAAGAATAGTAGTCTGTGTTTGAACTTGGGAGGTAGAGAAGGTGGAACATTTCTGAATGATTAATTTCTTTTAGAGACATACTCTGCTTCATCCTTTGTCATTGTTTTTTGCGATTAATAAGACAAACACCAGTTGGCTACCGAGGTTGAGTTCTATTTCTTATGAAATTATTTGTTCGTAGTCATTGATAAAGTAGTTTTGAAAAGTAGCTGTTTTATAACCTCAGGTGGGCTTCAACAATGCTTATATTGCTTTCACTTCTATGAAATGTTGGATTGTAAACTCATTTTGAAACTAGTGTAAAATAATTTTATTTGAAGAAAACATGAACTATGGAACTTGTTTTTCTTCATCCCCTGCCCATCGTAGTTACCAATAATTTTTCTTACAAGACATGGCATCCACTGGAAAATAATTATTTGAACTCTGATGTTGACCATGCTGATTTATAGCTGTTTCATATGATCTTTAATGTGAATCCCTTTGCAGAAAGGAAAAAAAAAATATATATATATACTTAAAAGTAAATTGGATTTCACCTTTTTTTTTGTTTGTTCTGTACATGTTTTGCAGTTAGTCTTAGCCAACATGATTCATCTTTGGCCATTCAGACTGCAACTACATTTATTCCTCCTCCCACGACTGCTCGTTCTGTCTCGATGAGAGATATGGGTACAGAGATGACACCTATTGCAAGTCAAGAACCTTCTAGGACTGGAACTCCTGTGAGAGCAACAACACCAATGCGTAGTCCAAATTCTTCTCTTCCATCAACTCCTGGGAGAGGTGCACCAATCTCATCTCCGACCACCGCAGCTAATGATCGTGTAGATACTGACCAGGAGTTATCTGAGAAGGAGATGCAATTAAAAACTAGAAGAGAGATAATGGTTCTCGGCACACAATTGGGGAAACTGAACATTGCTGCATGGGCTAGCAAGGAGGAGGAGGATAAAGATGCTTCAACGTCACTTAAAACTGTTGCAACCGAACGACCAGCTAAAAGTGTGATAGAAACACGAGCTGCAGCATGGGAGGATGCTGAGAAAGCCAAGTATATGGCTAGGTAATCTTTTCTATCATTTTACCGCGTGCCGAGTCTTTCAAATCTTTCAGAAAAATAAAACTAAAGTTTGGTAGTTTCAGTCCTTTGTTTTTGTTCCTATTCCAATCCATATCCCTATTCAGATCTTAAGTACTATACTTTGGCATGGAAAAGTATTGGGTCCATTGGTTACAATAACTAATGATGATGAAAATTCATCAGGTTCAAACGTGAAGAGATGAAAATTCAAGCATGGGAAAATCATCAGAAAGCGAAAACAGAAGCTGAAATGAGGAGAGTTGAGGTTTGTGCATACTACTTGATGCTATTCTTGAATGACATTATATGTTTTGGCTGTTGAGTTTTCAGTGAGTTGTTAACCTCCTGGATCCAGTGGCTTTGGGATATGTGAGAAAAGAGTAAAAGGAAATTTGGAGAATGAGTTCGCCTATCAACATTTTAACTCAGGCCAACTTTTTATTGGGTTTTGGTTAGTCAAATGTTCTTTCTTTTCAAATGTGTACATATAAAGGCCAACATAAGGTAGCTTAGCGGTTAAAGCATTTACTCCTCGTAAAGTTAGATGTTCAAATTCCTACCGTTTCCTCCTCATAAGGTCAGTGTTTGAGCCTATTTGAGTATTCGTTAAGAGTCGTGCCTTCATGTGGTAAGTTAGTTATGATGTAAGCATGTTTATAGACATTACGAATGGCGAGGAGAAGCAAGTTTTGGTTTTGGCTCATGTCTAGGGGGAGTGGAAAGCACGAGTATTCCGTTGTAGAAATACTTCTGTAATACCATGAATAGTTGAACTCCCATAATACGTCACATATACTCATTCCTGATTAACGTTGGAAAATTTCCAGCCAAGAAACTCAAATATCAAGTCAATCTTTTGATAATGAAATTATGCATTGAATTAGTACTTGGGGTTATGCAGGTTAAAATAGAGAGGATGAGAGGACAGGCGCACGATAAGCTGATGAACAAACTAGCGGCAGTTAGACACAAAGCTGAAGAAAAGCTAGCAGCAGCAGAGGTCAAGAGAAACCGCCAAGCTACAATAGCTGAGCAGCAAGCAGATTATATTCGCCAAACTGGTCGCATCCCTTCTTTATTTTCCTGCTGCTATTGNTTTCATTGTTTTAAATCATTTGTATGTGTTTTTATTTTCTCACTATTTGTCTATGTACTGTCCATACTGTATACAAATTCCGGTTATTGCATGGTTTGTTTAGTTTCTATATGCGCTTATAGAAGAAAAGATATGGGCTGCTTCATATTTTGTACATTATCACTTTTATGTTTTCAAAGAGGTGCCAAAAATATGAAAAATCATTTCGGAGGTCTGTTACCATGTGATTCATAGTTTTGTCTCATTGGATGAATGAGATAAATTATAAAAGTATTTTGAATTTGTTTGGGATTGATTATCTAATGCTTGATAACTATTAATCCAATGCATGATATGACCCTCGACGAATAGATCTTATCAGACATGATACCCACCAACTTCCCATGCAAGCTCGCAAGCTCTAGATCAAAATGAGCCATTGACAAGTACTTGTAAATCCACTAATCAATTACTAATCAATCCACTCATCAATTACTAATCAAATTATGAACTAGTGTAAGATTAATTGAAGTTTTAAGAGTATTTTAAAAAGGAGTGGAAGTGAAGATAGAAAAAAATTAATTTATATGGGTATACTAAGATCTCAAATTAATAATAATGATGTCAATTAAACATTAAACCTTTTCTCTTAATTTTTTTTAAAGATTTTAAGTTAATTTATATGAAATTAAGGGAAAATAGTTATAAATTATTAGCGGTAAGATTGTTCGGTATAAATTAAATATTCACACAAATTTGTCATTTATATTTTTTAAAAAATAATATACATGTAAAAATAAAATTTGTTTTCAAAATTATTTTTATTACAAATATCTAGGAATCCAAAAGAAATCAGGATTTAAACACATAAAATGGCGCACATGCACACATAGAGAGCCTTGAATTGCATCTCAGCCATTCTCTTTGCCCTTTCCTTCTTGAATTAGGGATTTTGCCTTTTCCCCAAATTCTGTAAGATACTCGCTGCTCTTCTTCATATCCTTCATCTTCTTCCTCCACCACCGCTTACATCTTCTCTTCCCTTATGGATTTCTCCTTTAGATTCATTTTTTTCACTATATCTCCTCTTAATCTTCGCTAACAATACTTTCCTTCGAGCTTCAGCTTGTTTTTCCCTTTTTTTGGTATAATTCTCGCCATTCCATCGCTTTCTCAGTTGGCTCTTTTGTTTCTGATTTCGTTTGCTGGTCGTTCTTTTGGATCAGAATCGCTATTGGGATTTTTGGGGTGTTCTTGGATCTGTGAGCGAAGCGGTATTGTGGGGTCTTTTTTTTCTTTTCGATCGGTATGGTAGGAGGCGGACCTCAAGTTCTTGAGCAGCAACAGCAATCTCTGCCTCAACCCCTATCGGCTGCCAACGAGGAGGCCGTTAAGAGGAACACCGACTGTGTTTACTTTCTTGCTTCACCTTTGACTTGTAAAAAGGTTTCTTTTCTTTTACTCAGATTTTGCTTGATTCGACACTCTTTTGCCCTTCTATCTTTGAATTTTTTGGTTGCGTTTGCTCTTTCTTTTTTTCTTTGAATGAGATCTGTGTAGGTTAAGATCCCGAGAGTTGGCTAGTGAGGATTAGGTTGTGGAAATTGAGCTAGTTCACTTAGAAGTCCTTTTTGAATGCGTTTGATGTTTATTTCACCCAAGTCACTAGGGACTTACTGTAATTCCTATGTTAGCTTCTGGAGAAATTTTGTTGTCAATTTCATAGTTCTCCTTAACTTAGGGTCAAATTGTGGCGTTGTTAGCCACTTAACGTTATTGTGCAACTTTGGGAGGAAAACTGTTTGTTCTTGATTGTCACGTGTATGTGTAGATGTATGATCTTGTAGCTTGTAATTGAATGCATGGAATTTAAATGTAAGGTATGATTGTTGTAGAATATTTCCTCAAATTTATCATGTGTCCCAACTTAAGTTTGCAAATTCTTGGTATTTAATACCGGATCGAGATGTTAATTGACCACTTTTTAATTCCTGGTTAGGTATACATAGTAGTTTTTAGTATCCTTTTAAATACACATACATATTTCATCACTTCTCGAGGATTCGAACTCATTGGATTTTTTTCCTACCTTTTCCCCTTGAGTTACATTTTTGTAAATCCTCAATTGAAAACATCTGATTTGTGTTGTAGGGTTATAAACAACCATGAGTATAAAAAAAAAATCTAATATGTTTCAATATATTTCTCTAACTAATAGGTTCCTCTTCCTAAACTTAATTTGGTTATGTCCTATTAATCAAGGCAGTTATTTGGCATTCACGTAGTATTAGAAAGAAAATCCTTTGATAACACTATATCCCATGATCAAGACAATTGATGTTTGTTGAAAATACACTGTGGATACAATTATATTTATCATTGATGTTGAATTGTGTCCGTAATATCTTTCTATGTGATTTCCAACAGGGGAGTGAATGCGAGTATCGCCATAGTGAATATGCCCGGGTCAATCCTAGGGATTGCTGGTTCTGGTTGAATGGTAACTGCTTGAATCCAAAATGTTCATTCCGACATCCAGTAAGTTCTATACATTTGCTTGTAGCAACTGTTTATGTTTCTAAGTAAATCCGTGTTTATAATTTCAAGTGGAACTAGTTTCTTTTTTGACTGATTTTCATCTTCCTATCTTTCTTGTTATGATTTTCTTTTAGCCTCTTGATGGCTTGGTAGGAACACCTCATTCAACAAATTCGAGTTCTCAGATTCCTTCCCAAACTTCAGCAATTCCATCCGCTCCTGTCAATTCGAGTAAACAAGGAGTCCCCTGCATTTTCTTCCAGAAGGGTTTGTGTCTTAAAGGAGATCGATGTGCATTCTTGCATGGGCCTTCTCCTGTTCCAATGAACAAAGTCCCTCAGACAACAGCAAATGCCCAAACTGGCAAGCCACCGAGTGTCAAGAAAGTTTCTGGTGGTACCCTGAGAAGTGGTCAAGAGCAGAAGATACCTCGAGCAGATTGTTCGAAGTCAATTGATGGGGCACCTCTTAAGCTTGCAACAAAAGATGAAACTGTGCCGTCAAATGTTGGTGACGTCAATGAGAAGAGTGGACCACCTGCAGAAGTGGCTGATGATGGTTCAAGGTACAAGGCTACAAATTCTCTTCCTGTTTTAAATGAAAGCTCATTAAGTAGGGCCAGTCGACTGCAACCGAGTCATGTAATAGATGATTATGGGTTACAGAATGGTAAGGATGCTGATGAGTTTTTGAGAGAGACCTCTCCAGGTTTTGATGTTCTTGTTGATGATGAGCTGAGAGGCTCTGGTTATTATGAAAGTGAAGAACAGTACGGGAGAACAAGAGGTCACGAGGGAACAAATATGATTTCTATGAATGACTATGAAATTGGTCATTCTTCTGATTATAAGATGATTTCTGATGTTGATCATGATGTTTATAACAATGTAATTGACTATGACTATGACAGTAGGCAAGGGCAGTATGGTTGGGATCGGCATAGGTCCTCATCTGAGAAGTTTTCGATGGGGTCAGCGCAGATGGATAAGAGACTTTTCCCAAAATCTAACAGTCCAGAACATATTCAGACTATGGATTTACGTCATCGTTTAAACAAGCAGAGAAGGGGAAATGGTTTGAGATCTGTGATCAATAATGAGCATACTGCTGGTCACCCTGAAGAGCGAAACTATCACGCTCCTAGGAGAGATTCTCACCTCTCTCAAGAGAACTCCACGAGTAACCGTCTCCGAGGTAGGATAAAGCTCCCAAGGATACCGTCTCCAGTTAGGAATAGCAATTTGCAGCCAGAAAGAGATTTAAACCGGGGTAGACCCTGGGGAAGATTGCTACCTGGAAGGTCACAGTCCTTGTCTCATGAGGGAAGCAACAGAGATGAAATGAAAGGCAGACTGGAAGAAGATTATAACAATGAGGGTAGAAATTTCAATGGTCTTAGTTCTAGAAGGGATAGGATGGATGGAACGTCGGACTTTGCTGCTCCAAAAAGTCTGGCTGCGCTGAAAGACAAGCATGTGGGTACTAAGGAGCAGCAAACCCTTGGCAAAAGAAAAGGCTCAGATAATGAACAATCTGGAGGTGAACTTTCGTTTGAGGGACCGAAGTCTCTTGGTGAGATTCTTAAAAAGAAGAGACAAGTTAAATCTGATGTTGACCCTCTTGTGAATAATGATGAAAGAGAACGCTGTGTCGGATCAATTGAACGCTCCACTACTCCCCTCTTGAAGCAAAGTGGTCTATCATCAACGGCCAAGCAAGAATCGAACAGTCTTGAAGGAACCAAGTCCTCTCCAGCTGAAGCTTTTGGGCTAGAGGAAAATATCGACGTATCTCATCACCTTTCTTCTCAGCTTATGCATTCGACTGATGGCCACGAGATTGAAGCTTACGATGAAACACTGGAGGAGGATCATGAATATGAAGGAGATGATCAGAGAGATTGTGAATACAAGTACGAGCAAGTCGACTATGGGGAATACAATTACGAAGAAGGTGAGAACATAAATCCTGAAGAAGAATACATGGACGATGAAGATGGAGATGACTTTGCCAAAAAAATTGGTGTCATGTCATGATCACGATCATGAGCAGCGCAGATCACTCATGCTCTTTGCTATGAACATTTTGTTTCTGAGGACTTGCATGGTCAGTTCAAGATTGAGTACATGTTGGTGGCTGCAATGAATAATCTTCTGAACCATCAATTATTGGACACTCCTCTTGTATTAATTGGAAGAGAACCGTCTTTTTACTTGATTTATTTTCCTGCTTTAATTATATTTTAACAACCCTGATTTGAATGGGAGATGTTGGTTATGCTTGAGGCATGTAGTCGTGCTCACCAGTCGAAACGAAGTAAAAGTATGTTGCAGTTGGCGAGAGTGAATGGTGTAAGAGTAGAAAGTTGAATAAGAAAATTGATATTCTTATGCACCTTTCAACATCAACTTCCCGTGATCCTCTTTTTATTTCCAAGTCTTTTATTTGTGGTTCATTTCTGTCCTTTTGATTGTTCACCTCCAATTTGTCGATGATATTCTCATTTTTTGCCCTTCAGGACCGGGGAGACTTTTGGGTATAAACAAGAATCAAAAGCAATAAATGCTCTGCTTTGCTCCTAAAGGAGTAGATGAAACTTGGAAGGAGATCAAAAAACAGGTGTATACACAAGACAGGTTACAAAGAAAACTCAGTTTCGAAAACAAGAACAAAAAAATATTACAACATAGCAAGTGACTAAAACAAAAAATGAAAAAGAAAAAAAAAAAAAACAATTGTAGCCCCGCAGTAAACGACCCAAAATTCATTAAATTTGAATATTTCTCATAACATGGTTAAAATATACTAACCCTAGTTCATTTTTATTTAACATAATGACTCGAATAGAGTCTTCTCGAGAAAGTTTGGATGGTGAGATCTTATGCACATAACTATATATTTTTATTTCAATCTTCGTACAATTTCTAGTGAATACAGTAAAAGGACGTCCCAATTTCACTAGTTTGAATAAAGAAAAAAATCACAATAATAATATGGAGAATGACCGAAAAAGGGACAACAGTGAAACTATTTGGGCTAGTTTTTTAGTAAATATATATTGCACTATGTGTAATTTAATTGTATTATGCACTACACTGCTTCTGCACTACTTCTGTGACTTATTAAAAGAGAGAGATTCATCCGTGAAAACAGTAGTAGTGGATTACGCTGGTAGGTAGATATTTTTAATACAAATGTTAGTAAACTGAATGAAGGTACAAGCGACAACAGACTTCTGAAAGCTAAGAAAAAAAGACCTCTAGATTTGATCACTATGACTTGGATAAATAAGCTTACATATAAAAACAAATATAAAAAAGGGATATTATAAACTTTTTTTACTTAAAAAAAAAAAAAAAAAAAAGGTGGTGTCAAAGGGTGACGGTAGTTGACGTGGCAAGGCAACACGTTTGACTCACGAAAGGTAAATGTCAATTACTCATTACCATTACCCCGTTTTGCCGATATTTTGGGAAACGATAAATTGGGAGGAAAAGAAACGAAAGCGTTCGAATGGGCGGTGAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGGAGAAGGGGTAAAAGGGTCATTTGAGAAAGGGAAAATAATAAGCCCTGAAAAAGGTTATGGTGTTTGTTTGNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA

mRNA sequence

ACTTTAGTGGACAAAATTTGAAATATTAAGAACCATAAAATGAACTCTTTGAAAGTAGAGGGACCAAAGTAGAGAATATAAGAAAGTAAAAGGATTTGAAGTGAAAAAAAGGAGAAAGAGAATAAAGGTCCTTTTCCATGGTCTTAGTAGAAGACGAAATAGCTGAAGATGCAGAGGCAGAGAACGGTTCAGTGTACAGATGAATTGAAGCAGCGCGCGCACACACACACACACACATGCTTGTTGCCTTATCTCTCAGTCTCATAGCGGAAGTGATGGAACTTCCCTTCACTCCTCTTCCTCTTTCTGAGCTTTGACCATGAAATCTCAATCTCCACCCATTAATTCCCTCCACAACCCACTCTTCTGAACTCGCCTTTGCGCGAAGGCTTGTAGCATTGCTCGAAATCCCTTCGTTTCTTCTCCTTCTGCTAATCCCAGACGACGAATTTATTTCATGGACTACGAGAGGATCCAGAAGCCTCAGGCTGCCGGTGGAGGGGGGTTTTCGCCCGGGAAGCTTAGGAATATGCTGCTTGGGTTGGAGAAAAAGAGGAAGGAAGAGGAGGAAGAGCTTGGATCCACTTACGACTTGAGATCTCAACCTTTGCCGATCGATGAAGCTGGCACTAGCGGATCTGATATTTGCAAAGATGTGGATGTGGTCAGTGTCCTTCCAGAATGCTCGACTTCAAAAAAGGCTGATTCACTGGACTCGGAGATGATTAATGAGCACAGGTTGAAGGACAACACTCATAATTCACGACTTAGGATGCAGGACGAGCCTTCTCTAGATTATGATAGTGGACAGGATGCTTCCACTCTGCTCACTTCAACCTTTGAGTTCCAGAAGTCAGAGAGGTCCACACGAGTTACCCTGGGGCCCTTCTCTAAGCCAGCACCATCCAAATGGGATGATGCTCAGAAATGGATCGCAAGCCCTACCTCAAATAGACCCAAAACAGGGCAATCTCAGATGCAGGCTGGACATCTTTTTGGATCACGAAAATTAGGTATTGGTATTGGGAATCGTCAACCATCTCTGAAGATCGTGGTTGAGGTTCCAGATCGGAAAGTGGCTGCTTTTGAAGAACCAGATACAAAGCAGATTGATAGTGAAGCTAACTTTGGAAGTGTTGCCCAGAAGTTTGTTACTTGGGATGCTAATCCATACACAGTAGCAGATACACATGGCAAGCCTATGTTGATGATTGAGAACTCTGTTGGAGAGTCAGCAATTAGTCTTAGCCAACATGATTCATCTTTGGCCATTCAGACTGCAACTACATTTATTCCTCCTCCCACGACTGCTCGTTCTGTCTCGATGAGAGATATGGGTACAGAGATGACACCTATTGCAAGTCAAGAACCTTCTAGGACTGGAACTCCTGTGAGAGCAACAACACCAATGCGTAGTCCAAATTCTTCTCTTCCATCAACTCCTGGGAGAGGTGCACCAATCTCATCTCCGACCACCGCAGCTAATGATCGTGTAGATACTGACCAGGAGTTATCTGAGAAGGAGATGCAATTAAAAACTAGAAGAGAGATAATGGTTCTCGGCACACAATTGGGGAAACTGAACATTGCTGCATGGGCTAGCAAGGAGGAGGAGGATAAAGATGCTTCAACGTCACTTAAAACTGTTGCAACCGAACGACCAGCTAAAAGTGTGATAGAAACACGAGCTGCAGCATGGGAGGATGCTGAGAAAGCCAAGTATATGGCTAGGATGAGAGGACAGGCGCACGATAAGCTGATGAACAAACTAGCGGCAGTTAGACACAAAGCTGAAGAAAAGCTAGCAGCAGCAGAGGTCAAGAGAAACCGCCAAGCTACAATAGCTGAGCAGCAAGCAGATTATATTCGCCAAACTGGAGGCGGACCTCAAGTTCTTGAGCAGCAACAGCAATCTCTGCCTCAACCCCTATCGGCTGCCAACGAGGAGGCCGTTAAGAGGAACACCGACTGTGTTTACTTTCTTGCTTCACCTTTGACTTGTAAAAAGGGGAGTGAATGCGAGTATCGCCATAGTGAATATGCCCGGGTCAATCCTAGGGATTGCTGGTTCTGGTTGAATGGTAACTGCTTGAATCCAAAATGTTCATTCCGACATCCACCTCTTGATGGCTTGGTAGGAACACCTCATTCAACAAATTCGAGTTCTCAGATTCCTTCCCAAACTTCAGCAATTCCATCCGCTCCTGTCAATTCGAGTAAACAAGGAGTCCCCTGCATTTTCTTCCAGAAGGGTTTGTGTCTTAAAGGAGATCGATGTGCATTCTTGCATGGGCCTTCTCCTGTTCCAATGAACAAAGTCCCTCAGACAACAGCAAATGCCCAAACTGGCAAGCCACCGAGTGTCAAGAAAGTTTCTGGTGGTACCCTGAGAAGTGGTCAAGAGCAGAAGATACCTCGAGCAGATTGTTCGAAGTCAATTGATGGGGCACCTCTTAAGCTTGCAACAAAAGATGAAACTGTGCCGTCAAATGTTGGTGACGTCAATGAGAAGAGTGGACCACCTGCAGAAGTGGCTGATGATGGTTCAAGGTACAAGGCTACAAATTCTCTTCCTGTTTTAAATGAAAGCTCATTAAGTAGGGCCAGTCGACTGCAACCGAGTCATGTAATAGATGATTATGGGTTACAGAATGGTAAGGATGCTGATGAGTTTTTGAGAGAGACCTCTCCAGGTTTTGATGTTCTTGTTGATGATGAGCTGAGAGGCTCTGGTTATTATGAAAGTGAAGAACAGTACGGGAGAACAAGAGGTCACGAGGGAACAAATATGATTTCTATGAATGACTATGAAATTGGTCATTCTTCTGATTATAAGATGATTTCTGATGTTGATCATGATGTTTATAACAATGTAATTGACTATGACTATGACAGTAGGCAAGGGCAGTATGGTTGGGATCGGCATAGGTCCTCATCTGAGAAGTTTTCGATGGGGTCAGCGCAGATGGATAAGAGACTTTTCCCAAAATCTAACAGTCCAGAACATATTCAGACTATGGATTTACGTCATCGTTTAAACAAGCAGAGAAGGGGAAATGGTTTGAGATCTGTGATCAATAATGAGCATACTGCTGGTCACCCTGAAGAGCGAAACTATCACGCTCCTAGGAGAGATTCTCACCTCTCTCAAGAGAACTCCACGAGTAACCGTCTCCGAGGTAGGATAAAGCTCCCAAGGATACCGTCTCCAGTTAGGAATAGCAATTTGCAGCCAGAAAGAGATTTAAACCGGGGTAGACCCTGGGGAAGATTGCTACCTGGAAGGTCACAGTCCTTGTCTCATGAGGGAAGCAACAGAGATGAAATGAAAGGCAGACTGGAAGAAGATTATAACAATGAGGGTAGAAATTTCAATGGTCTTAGTTCTAGAAGGGATAGGATGGATGGAACGTCGGACTTTGCTGCTCCAAAAAGTCTGGCTGCGCTGAAAGACAAGCATGTGGGTACTAAGGAGCAGCAAACCCTTGGCAAAAGAAAAGGCTCAGATAATGAACAATCTGGAGGTGAACTTTCGTTTGAGGGACCGAAGTCTCTTGGTGAGATTCTTAAAAAGAAGAGACAAGTTAAATCTGATGTTGACCCTCTTGTGAATAATGATGAAAGAGAACGCTGTGTCGGATCAATTGAACGCTCCACTACTCCCCTCTTGAAGCAAAGTGGTCTATCATCAACGGCCAAGCAAGAATCGAACAGTCTTGAAGGAACCAAGTCCTCTCCAGCTGAAGCTTTTGGGCTAGAGGAAAATATCGACGTATCTCATCACCTTTCTTCTCAGCTTATGCATTCGACTGATGGCCACGAGATTGAAGCTTACGATGAAACACTGGAGGAGGATCATGAATATGAAGGAGATGATCAGAGAGATTGTGAATACAAGTACGAGCAAGTCGACTATGGGGAATACAATTACGAAGAAGGTGAGAACATAAATCCTGAAGAAGAATACATGGACGATGAAGATGGAGATGACTTTGCCAAAAAAATTGGTGTCATGTCATGATCACGATCATGAGCAGCGCAGATCACTCATGCTCTTTGCTATGAACATTTTGTTTCTGAGGACTTGCATGGTCAGTTCAAGATTGAGTACATGTTGGTGGCTGCAATGAATAATCTTCTGAACCATCAATTATTGGACACTCCTCTTGTATTAATTGGAAGAGAACCGTCTTTTTACTTGATTTATTTTCCTGCTTTAATTATATTTTAACAACCCTGATTTGAATGGGAGATGTTGGTTATGCTTGAGGCATGTAGTCGTGCTCACCAGTCGAAACGAAGTAAAAGTATGTTGCAGTTGGCGAGAGTGAATGGTGTAAGAGTAGAAAGTTGAATAAGAAAATTGATATTCTTATGCACCTTTCAACATCAACTTCCCGTGATCCTCTTTTTATTTCCAAGTCTTTTATTTGTGGTTCATTTCTGTCCTTTTGATTGTTCACCTCCAATTTGTCGATGATATTCTCATTTTTTGCCCTTCAGGACCGGGGAGACTTTTGGGTATAAACAAGAATCAAAAGCAATAAATGCTCTGCTTTGCTCCTAAAGGAGTAGATGAAACTTGGAAGGAGATCAAAAAACAGGTGTATACACAAGACAGGTTACAAAGAAAACTCAGTTTCGAAAACAAGAACAAAAAAATATTACAACATAGCAAGTGACTAAAACAAAAAATGAAAAAGAAAAAAAAAAAAAACAATTGTAGCCCCGCAGTAAACGACCCAAAATTCATTAAATTTGAATATTTCTCATAACATGGTTAAAATATACTAACCCTAGTTCATTTTTATTTAACATAATGACTCGAATAGAGTCTTCTCGAGAAAGTTTGGATGGTGAGATCTTATGCACATAACTATATATTTTTATTTCAATCTTCGTACAATTTCTAGTGAATACAGTAAAAGGACGTCCCAATTTCACTAGTTTGAATAAAGAAAAAAATCACAATAATAATATGGAGAATGACCGAAAAAGGGACAACAGTGAAACTATTTGGGCTAGTTTTTTAGTAAATATATATTGCACTATGTGTAATTTAATTGTATTATGCACTACACTGCTTCTGCACTACTTCTGTGACTTATTAAAAGAGAGAGATTCATCCGTGAAAACAGTAGTAGTGGATTACGCTGGTAGGTAGATATTTTTAATACAAATGTTAGTAAACTGAATGAAGGTACAAGCGACAACAGACTTCTGAAAGCTAAGAAAAAAAGACCTCTAGATTTGATCACTATGACTTGGATAAATAAGCTTACATATAAAAACAAATATAAAAAAGGGATATTATAAACTTTTTTTACTTAAAAAAAAAAAAAAAAAAAAGGTGGTGTCAAAGGGTGACGGTAGTTGACGTGGCAAGGCAACACGTTTGACTCACGAAAGGTAAATGTCAATTACTCATTACCATTACCCCGTTTTGCCGATATTTTGGGAAACGATAAATTGGGAGGAAAAGAAACGAAAGCGTTCGAATGGGCGGTGAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGGAGAAGGGGTAAAAGGGTCATTTGAGAAAGGGAAAATAATAAGCCCTGAAAAAGGTTATGGTGTTTGTTTGNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAA

Coding sequence (CDS)

ATGGACTACGAGAGGATCCAGAAGCCTCAGGCTGCCGGTGGAGGGGGGTTTTCGCCCGGGAAGCTTAGGAATATGCTGCTTGGGTTGGAGAAAAAGAGGAAGGAAGAGGAGGAAGAGCTTGGATCCACTTACGACTTGAGATCTCAACCTTTGCCGATCGATGAAGCTGGCACTAGCGGATCTGATATTTGCAAAGATGTGGATGTGGTCAGTGTCCTTCCAGAATGCTCGACTTCAAAAAAGGCTGATTCACTGGACTCGGAGATGATTAATGAGCACAGGTTGAAGGACAACACTCATAATTCACGACTTAGGATGCAGGACGAGCCTTCTCTAGATTATGATAGTGGACAGGATGCTTCCACTCTGCTCACTTCAACCTTTGAGTTCCAGAAGTCAGAGAGGTCCACACGAGTTACCCTGGGGCCCTTCTCTAAGCCAGCACCATCCAAATGGGATGATGCTCAGAAATGGATCGCAAGCCCTACCTCAAATAGACCCAAAACAGGGCAATCTCAGATGCAGGCTGGACATCTTTTTGGATCACGAAAATTAGGTATTGGTATTGGGAATCGTCAACCATCTCTGAAGATCGTGGTTGAGGTTCCAGATCGGAAAGTGGCTGCTTTTGAAGAACCAGATACAAAGCAGATTGATAGTGAAGCTAACTTTGGAAGTGTTGCCCAGAAGTTTGTTACTTGGGATGCTAATCCATACACAGTAGCAGATACACATGGCAAGCCTATGTTGATGATTGAGAACTCTGTTGGAGAGTCAGCAATTAGTCTTAGCCAACATGATTCATCTTTGGCCATTCAGACTGCAACTACATTTATTCCTCCTCCCACGACTGCTCGTTCTGTCTCGATGAGAGATATGGGTACAGAGATGACACCTATTGCAAGTCAAGAACCTTCTAGGACTGGAACTCCTGTGAGAGCAACAACACCAATGCGTAGTCCAAATTCTTCTCTTCCATCAACTCCTGGGAGAGGTGCACCAATCTCATCTCCGACCACCGCAGCTAATGATCGTGTAGATACTGACCAGGAGTTATCTGAGAAGGAGATGCAATTAAAAACTAGAAGAGAGATAATGGTTCTCGGCACACAATTGGGGAAACTGAACATTGCTGCATGGGCTAGCAAGGAGGAGGAGGATAAAGATGCTTCAACGTCACTTAAAACTGTTGCAACCGAACGACCAGCTAAAAGTGTGATAGAAACACGAGCTGCAGCATGGGAGGATGCTGAGAAAGCCAAGTATATGGCTAGGATGAGAGGACAGGCGCACGATAAGCTGATGAACAAACTAGCGGCAGTTAGACACAAAGCTGAAGAAAAGCTAGCAGCAGCAGAGGTCAAGAGAAACCGCCAAGCTACAATAGCTGAGCAGCAAGCAGATTATATTCGCCAAACTGGAGGCGGACCTCAAGTTCTTGAGCAGCAACAGCAATCTCTGCCTCAACCCCTATCGGCTGCCAACGAGGAGGCCGTTAAGAGGAACACCGACTGTGTTTACTTTCTTGCTTCACCTTTGACTTGTAAAAAGGGGAGTGAATGCGAGTATCGCCATAGTGAATATGCCCGGGTCAATCCTAGGGATTGCTGGTTCTGGTTGAATGGTAACTGCTTGAATCCAAAATGTTCATTCCGACATCCACCTCTTGATGGCTTGGTAGGAACACCTCATTCAACAAATTCGAGTTCTCAGATTCCTTCCCAAACTTCAGCAATTCCATCCGCTCCTGTCAATTCGAGTAAACAAGGAGTCCCCTGCATTTTCTTCCAGAAGGGTTTGTGTCTTAAAGGAGATCGATGTGCATTCTTGCATGGGCCTTCTCCTGTTCCAATGAACAAAGTCCCTCAGACAACAGCAAATGCCCAAACTGGCAAGCCACCGAGTGTCAAGAAAGTTTCTGGTGGTACCCTGAGAAGTGGTCAAGAGCAGAAGATACCTCGAGCAGATTGTTCGAAGTCAATTGATGGGGCACCTCTTAAGCTTGCAACAAAAGATGAAACTGTGCCGTCAAATGTTGGTGACGTCAATGAGAAGAGTGGACCACCTGCAGAAGTGGCTGATGATGGTTCAAGGTACAAGGCTACAAATTCTCTTCCTGTTTTAAATGAAAGCTCATTAAGTAGGGCCAGTCGACTGCAACCGAGTCATGTAATAGATGATTATGGGTTACAGAATGGTAAGGATGCTGATGAGTTTTTGAGAGAGACCTCTCCAGGTTTTGATGTTCTTGTTGATGATGAGCTGAGAGGCTCTGGTTATTATGAAAGTGAAGAACAGTACGGGAGAACAAGAGGTCACGAGGGAACAAATATGATTTCTATGAATGACTATGAAATTGGTCATTCTTCTGATTATAAGATGATTTCTGATGTTGATCATGATGTTTATAACAATGTAATTGACTATGACTATGACAGTAGGCAAGGGCAGTATGGTTGGGATCGGCATAGGTCCTCATCTGAGAAGTTTTCGATGGGGTCAGCGCAGATGGATAAGAGACTTTTCCCAAAATCTAACAGTCCAGAACATATTCAGACTATGGATTTACGTCATCGTTTAAACAAGCAGAGAAGGGGAAATGGTTTGAGATCTGTGATCAATAATGAGCATACTGCTGGTCACCCTGAAGAGCGAAACTATCACGCTCCTAGGAGAGATTCTCACCTCTCTCAAGAGAACTCCACGAGTAACCGTCTCCGAGGTAGGATAAAGCTCCCAAGGATACCGTCTCCAGTTAGGAATAGCAATTTGCAGCCAGAAAGAGATTTAAACCGGGGTAGACCCTGGGGAAGATTGCTACCTGGAAGGTCACAGTCCTTGTCTCATGAGGGAAGCAACAGAGATGAAATGAAAGGCAGACTGGAAGAAGATTATAACAATGAGGGTAGAAATTTCAATGGTCTTAGTTCTAGAAGGGATAGGATGGATGGAACGTCGGACTTTGCTGCTCCAAAAAGTCTGGCTGCGCTGAAAGACAAGCATGTGGGTACTAAGGAGCAGCAAACCCTTGGCAAAAGAAAAGGCTCAGATAATGAACAATCTGGAGGTGAACTTTCGTTTGAGGGACCGAAGTCTCTTGGTGAGATTCTTAAAAAGAAGAGACAAGTTAAATCTGATGTTGACCCTCTTGTGAATAATGATGAAAGAGAACGCTGTGTCGGATCAATTGAACGCTCCACTACTCCCCTCTTGAAGCAAAGTGGTCTATCATCAACGGCCAAGCAAGAATCGAACAGTCTTGAAGGAACCAAGTCCTCTCCAGCTGAAGCTTTTGGGCTAGAGGAAAATATCGACGTATCTCATCACCTTTCTTCTCAGCTTATGCATTCGACTGATGGCCACGAGATTGAAGCTTACGATGAAACACTGGAGGAGGATCATGAATATGAAGGAGATGATCAGAGAGATTGTGAATACAAGTACGAGCAAGTCGACTATGGGGAATACAATTACGAAGAAGGTGAGAACATAAATCCTGAAGAAGAATACATGGACGATGAAGATGGAGATGACTTTGCCAAAAAAATTGGTGTCATGTCATGA

Protein sequence

MDYERIQKPQAAGGGGFSPGKLRNMLLGLEKKRKEEEEELGSTYDLRSQPLPIDEAGTSGSDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYDSGQDASTLLTSTFEFQKSERSTRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQAGHLFGSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDSEANFGSVAQKFVTWDANPYTVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQLKTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAWEDAEKAKYMARMRGQAHDKLMNKLAAVRHKAEEKLAAAEVKRNRQATIAEQQADYIRQTGGGPQVLEQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPCIFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPRADCSKSIDGAPLKLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNESSLSRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGHEGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQGQYGWDRHRSSSEKFSMGSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEERNYHAPRRDSHLSQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGSNRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTLGKRKGSDNEQSGGELSFEGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGSIERSTTPLLKQSGLSSTAKQESNSLEGTKSSPAEAFGLEENIDVSHHLSSQLMHSTDGHEIEAYDETLEEDHEYEGDDQRDCEYKYEQVDYGEYNYEEGENINPEEEYMDDEDGDDFAKKIGVMS

Homology

[Close]

BLAST of Cp4.1LG01g06590 vs. Swiss-Prot
Match: C3H17_ARATH (Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana GN=At2g02160 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 6.5e-80
Identity = 266/725 (36.69%), Postives = 366/725 (50.48%), Query Frame = 1


Query: 481  EQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWL 540
            EQ++QS  + +S+A E+A+K NTDCVYFLASPLTCKKG ECEYRHSEYAR+NPRDC++WL
Sbjct: 13   EQKKQS--ETVSSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWL 72

Query: 541  NGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIP-SQTSAIPSAPVNSSKQGVPCIFFQKG 600
            NGNCLNPKC FRHPPL+GL+G      + S  P   T+  PS     +KQ VPC+FFQKG
Sbjct: 73   NGNCLNPKCGFRHPPLEGLLGNQGGAPAVSVQPIHATAQHPSV----AKQPVPCLFFQKG 132

Query: 601  LCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPRADCSK 660
            +C+KGD C+FLH P+P    K     A   T    S K +   T    +E+K+P  + SK
Sbjct: 133  MCMKGDMCSFLHTPNPAAYKKQHPVEAKPATDPQCSKKPIENNT----EEKKLPDVNLSK 192

Query: 661  SIDGAPLKLATKDETVPSNVGDVNEKSG-PPAEVADDGSRYKATNSLPVLNESSLSRASR 720
             + G    ++       + + D     G  P  V  +    +     P   E   S    
Sbjct: 193  VVKG-HTDISAAPRVASTGLRDSRSVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHS-TQL 252

Query: 721  LQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGHEGTNM 780
            LQ     D+    NGKDAD+ LRE+SPGFDVLVD+E   S YY  E++YGR     G + 
Sbjct: 253  LQKYGSDDNNSFHNGKDADDVLRESSPGFDVLVDNEAGDSEYYHVEDRYGRRSQERGNS- 312

Query: 781  ISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQGQYGWDRHRSSSEKFSMGSAQMD 840
                     +  D+  I+D D +         YD R+ + GW   R SSE+      ++D
Sbjct: 313  --------EYDPDFSAIADGDKEALREQRFDSYDRREDR-GWGHRRVSSER----EDRLD 372

Query: 841  KRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLR-SVINNEHTAGHPE-ERNYHAPRRDSHL 900
            +R++ +    E+I   DLR+RL KQR+GNG+R SV  +++ A     +R Y   RRD+  
Sbjct: 373  RRVYAEDERSENILESDLRYRLAKQRKGNGMRLSVGGHDYAAPDSSMDRGYRESRRDT-- 432

Query: 901  SQENS-TSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGSNRD 960
             +ENS +S+RL+GRIKL         SN +     +R    GR    RS+ L  +G  RD
Sbjct: 433  PRENSISSSRLQGRIKLR------ERSNGEEGHHFDRRSERGR---DRSE-LPSQGRLRD 492

Query: 961  EMKGRLEEDYN-NEGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTLGKRK 1020
             +KGRLEE+++ N+ R F    +RR  M+     +APKS          +K + +LGKRK
Sbjct: 493  RIKGRLEENHSGNQERGFGAPWARRREMEDERK-SAPKS------SREESKPEPSLGKRK 552

Query: 1021 GSDNEQSGGEL---SFEGPKSLGEILKKKRQVKSDVDPLVNNDE---RERCVGSIERSTT 1080
              + +    +    SF  P    EILK+K+   S      N DE   +E     I+  T 
Sbjct: 553  SFEEDHHSHKRSRDSFAAPLPFSEILKRKKAAASGGSRNNNKDETISKEEAGDEIKLITE 612

Query: 1081 PLLKQSGLSSTAKQESNSLEGTKSSPAEAFGLEENIDVSHHLSSQLMHSTDGHEIEAYDE 1140
               +++ + S  K E    EGT     E  G                        E   E
Sbjct: 613  ---EKTEVVSEPKAEVEE-EGTVMEEEEIVG------------------------EEVYE 663

Query: 1141 TLEEDHEYEGDDQRDCEYKYE---QVDYGEYNYEEGENI-----NPEEEYMDDEDG---D 1183
              E++  YEGD+    EY YE   + + GEY YEEGE +       EEE  +  +G   +
Sbjct: 673  GNEDEQAYEGDELNG-EYYYEEGYEEEGGEYAYEEGEEVVYAAEEGEEEATEGGEGEGEE 663

[Close]

BLAST of Cp4.1LG01g06590 vs. Swiss-Prot
Match: C3H19_ORYSJ (Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica GN=Os02g0831100 PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-71
Identity = 254/734 (34.60%), Postives = 333/734 (45.37%), Query Frame = 1


Query: 486  SLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWLNGNCL 545
            S  +P   A E   +R+TDC+YFLASPLTCKKGSECEYRHS+ AR+NPRDCW+W NGNC 
Sbjct: 3    SAVRPPVDAEEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCA 62

Query: 546  NPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPV-----NSSKQGVPCIFFQKGL 605
            NPKCSFRHPPLDGLVG P +  +S Q   Q S    APV      ++KQGVPC +FQKG+
Sbjct: 63   NPKCSFRHPPLDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGM 122

Query: 606  CLKGDRCAFLHGP----SPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPRAD 665
            C+KGDRCAFLH P    SP P +    T   A    P    K S     S  +Q  P A 
Sbjct: 123  CVKGDRCAFLHLPQATGSPAPQH---TTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAI 182

Query: 666  CSKSIDGAPL-KLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNESSLSR 725
              K  D A   K A K         ++  ++G  + +  D    K  + +P    S +++
Sbjct: 183  FDKPKDSAHNGKTAQKQ--------NLTNRAGHSSGIIHD----KKGSYMP----SGVTK 242

Query: 726  ASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVD--DELRGSGYYESEEQYGRTRGH 785
              R  PS    D   +NG +  EF+RE SPG DVL    D+       E    Y RT G 
Sbjct: 243  NYRPPPS--TGDDLAENGVEMGEFVREPSPGSDVLTGGADDNTEQSLREDRGAYRRTNGE 302

Query: 786  EGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQGQYGWDR-HRSSSEKFSM 845
            +   M+                    HD                YG++R HR S+EK   
Sbjct: 303  QHIGMLRQT-----------------HD---------------SYGFERSHRGSAEKLL- 362

Query: 846  GSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRS-VINNEHTAGHPEER-NYHAP 905
                 + R   +   P    + DLR RL KQRR N  RS  +++ H     +ER + H  
Sbjct: 363  ----SESRFSQREPMPLTADSSDLRQRLLKQRRLNNPRSGQVSDRHNVYPEDERHDRHRQ 422

Query: 906  RRDSHLSQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHE 965
            R +   S +  +S+RLRGRI+LP   +      LQPE++ +RG P  RL P     L   
Sbjct: 423  RGEEQASNDGVSSSRLRGRIRLP-AETTFDRLGLQPEKERDRG-PRARLSPPSQTDL--R 482

Query: 966  GSNRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTL 1025
            G   D +K +  ED +    N     S+ +    + +FA PKSLA LK K V     ++ 
Sbjct: 483  GKLHDRLKAKPNEDVSG---NVQSSLSKANEDAESLNFAGPKSLAELKAKKVAGSLMKSS 542

Query: 1026 GKRKGSDN--------EQSGGELSFEGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGS 1085
                G           + S   + F+GPK L  ILK+KR+  S       +   E   G 
Sbjct: 543  RSLTGPVRMTSEIVTIKDSSDPVLFDGPKPLNAILKRKREADSGNATDFGSKREEHSGGD 602

Query: 1086 IERSTTPL---------LKQSGLSSTAKQ-ESNSLEGTKSSPAEAFGLEENIDVSHHLSS 1145
             E S             +   G    A Q E + + G   SPA+    E   D S  L  
Sbjct: 603  EEGSQNDFRNIEDDIVGMNTEGNGEEAFQPEDDVVYGDSLSPADDIAAEAADDASRELEE 645

Query: 1146 QLMHSTDGHEIEAYDETLEEDHEYEGDDQRDCEYKYEQVDYGEYNYEEGENINPEEEYMD 1187
            Q             D    E+++YE DD        E+ DY EY          E+E  D
Sbjct: 663  Q------------QDVETAEEYDYEMDDVNAA----EENDYQEY----------EDEDDD 645

[Close]

BLAST of Cp4.1LG01g06590 vs. Swiss-Prot
Match: C3H32_ORYSJ (Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica GN=Os04g0671800 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-63
Identity = 233/766 (30.42%), Postives = 348/766 (45.43%), Query Frame = 1


Query: 481  EQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWL 540
            E   ++  +PL A  EEA++RNTDCVYFLASPLTCKKG+EC++RHS+ AR+NPRDCW+WL
Sbjct: 14   EASTEAGARPL-APEEEALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWL 73

Query: 541  NGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPCIFFQKGL 600
            N NCLNPKC FRHPP+DG+ G P     ++ +P+ +S    AP NS KQ VPC +F+KG 
Sbjct: 74   NSNCLNPKCPFRHPPIDGMFGAP-----TTGMPAVSSHY--APFNSGKQLVPCYYFKKGN 133

Query: 601  CLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPRADCSKS 660
            CLKGDRCAF HGP  V  N   Q            V KVS   L   Q QK        S
Sbjct: 134  CLKGDRCAFYHGPQSVGNNPSEQ------------VVKVSSLPLEQLQTQKNDLLGIKDS 193

Query: 661  IDGAPLKLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVL-NESSLSRASRL 720
            +            ++       NE+     + +   S   AT ++PV  N  S  ++ ++
Sbjct: 194  VQST--------NSIQHGAPITNERGKTAVDRSTVNSARTATVAIPVASNAMSCPKSEKV 253

Query: 721  Q---PSHVIDDYGLQNGKD-------------------------------------ADEF 780
            +   P+ + + +   +G D                                     ADE 
Sbjct: 254  KSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWNQSYEMPPADDLPQNSREADEL 313

Query: 781  LRETSPGFDVLVDDELRGSGYYESEEQYGRTRGHEGTNMISMNDYEIGHSSDYKMISDVD 840
            L E+SPGFDVLVD++  G+ Y   E+         G +M  + DYE    +D+ + +  +
Sbjct: 314  LGESSPGFDVLVDNDADGAAYLHDED--------FGGDMYPVEDYEYA-PADFDVRAHHE 373

Query: 841  HDVYNNVIDYDYDSRQGQYGWDRHRSSSEKFSMGSAQMDKRLFPKSNSPEHIQTMDLRHR 900
             + +N + + D           + R SSE+        ++R   +      +   DLRHR
Sbjct: 374  RERFNGMDEQDQMGHMYDGYERKRRRSSERSMERPFHSERRFLQRDRDRVEMDGSDLRHR 433

Query: 901  LNKQRRGNGLRSVINNEHTAGHPEERNY------HAPRRDSHLSQENST-SNRLRGRIKL 960
            L ++R      ++    +      +  Y      H   RD H S   ST S+RL+GRIKL
Sbjct: 434  LRRRRINESSLAISPERNGEQRRRDERYRERAHGHRSHRDHHQSSRGSTLSSRLQGRIKL 493

Query: 961  P-RIPSPVRNSNLQPERDLNRGRPWGRLLPGRS---QSLSH-EGSNRDEMKGRLEEDYNN 1020
            P R P  V   + + E++ +R R   RL P R    Q   H E    +E   R   +   
Sbjct: 494  PGRSPDRV---DTRSEKERDRRRLRDRLSPVRRTEFQGTRHREAGQHEEQTQRRSSELAL 553

Query: 1021 EGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTLGKRKGSDNEQSGGELSF 1080
              RN +G    +D                + D H     + +    K + + +    L F
Sbjct: 554  GSRNADGQHLTKD----------------VPDSHNFPHRKNSRDSSKANGSVEPEASLDF 613

Query: 1081 EGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGSIERSTTPLLKQSGLSSTAKQESN-- 1140
            EGPK L  IL++KR+           +    C    ++S     +Q+ L+   K+  N  
Sbjct: 614  EGPKPLSVILQRKREA-------AWANGTSACSPKQDKSAEVSHRQASLAEAEKEGDNII 673

Query: 1141 -SLEGTKSSPAEAFGLEENIDVSHHLSSQLMHSTDGHEIEAYDETLE----EDHEYEGDD 1187
             S E    S  E F  E +I V  H  S    S+ G ++EA ++ +E    E+ + +  D
Sbjct: 674  SSDEYKSGSGDEEFRDEGHIPVEGHGQS----SSHGDKLEA-EDIIEVDPVENQDADNYD 709

[Close]

BLAST of Cp4.1LG01g06590 vs. Swiss-Prot
Match: C3H34_ORYSJ (Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica GN=Os05g0176400 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-31
Identity = 150/533 (28.14%), Postives = 218/533 (40.90%), Query Frame = 1


Query: 502  NTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWLNGNCLNPKCSFRHPPLDGLVG 561
            NTDCVYFLASP TC KGS+CEYRH++ AR N R+CW+W  GNC+NP C+FRHPPL+ L  
Sbjct: 17   NTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLENL-- 76

Query: 562  TPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPCIFFQKGLCLKGDRCAFLHGPSPVPMNKV 621
              + T S +   S  S        S K   PC F+    C KGD C +LH   P+  N  
Sbjct: 77   --NKTKSLADPLSLCS-------TSVKAANPCYFYYNSHCSKGDNCPYLH--EPLTSNDA 136

Query: 622  PQTTANAQTGKPPSVKKVSGGTLRSGQEQKI--PRADCSKSIDGAPLKLATKDETVPSNV 681
              T+  A T  P   K   G  +    +  I  P  D S  I   P+       ++    
Sbjct: 137  VGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEVPV-------SINPEF 196

Query: 682  GDVNEKSGPPAEVADDGSRYKATNSLPVLNESSLSRASRLQPSHVIDDYGLQNGKDADEF 741
            G+    SG   E + D   Y   +++  LN                      +  + DE 
Sbjct: 197  GEAEAVSG-ALETSTDIDEYMKCSAVSDLNSGD----------------STMDHTEQDE- 256

Query: 742  LRETSPGFDVLVDDELRGSGYYESEEQYGRTRGHEGTNMISMNDYEIGHSSDYKMISDVD 801
             R++SPGFDVLVDD L      +S+ ++  T   E  N +   +Y I     Y M    D
Sbjct: 257  -RDSSPGFDVLVDDCLSN----KSDLEHQLTT--ESDNKVLHAEYGIRDPVLYDMYYH-D 316

Query: 802  HDVYNNVIDY-DYDSRQGQY------GWDRHRSS-------SEKFSMGSAQMDKRLFPKS 861
             + YN   ++   D RQG        G   H S         +   + S + D+R F   
Sbjct: 317  PEYYNYEPEFCGLDDRQGYLYLCQPNGAHEHESEITLGHLLPQNTEVTSDEYDRRFFNPR 376

Query: 862  NSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEERNYHAPRRDSHLSQENSTS-- 921
            N    +   +  H+ + Q R    R   N +   G  +       +R   L  +NST   
Sbjct: 377  NFTSSVADTNFVHQ-HTQIRHISKRRPENRKGAKGKKD-----CIKRSRCLEPKNSTQQI 436

Query: 922  ----NRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGSNRDEMKG 981
                 R R    +   P P  ++  +  R  NRG+    L    S+  + + +    +  
Sbjct: 437  ESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQQHVLSAKSSEHPTADFTGPKTLAQ 493

Query: 982  RLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTLGK 1013
              EE   +     +  +   +    + DF  PKSL  L    + TK + ++GK
Sbjct: 497  IKEEKCKSNSSFSHSTACTPNVRSFSDDFEGPKSLTEL----LMTKSRSSVGK 493

[Close]

BLAST of Cp4.1LG01g06590 vs. TrEMBL
Match: A0A0A0KMA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265800 PE=4 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 568/719 (79.00%), Postives = 626/719 (87.07%), Query Frame = 1


Query: 474  GGGPQVLEQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 533
            GGGPQVLEQ  QSLPQ  SAA EEA+KRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP
Sbjct: 3    GGGPQVLEQPPQSLPQSTSAAEEEAIKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 62

Query: 534  RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPC 593
            RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHST  SSQIPSQT+AIPS PVNSSKQ VPC
Sbjct: 63   RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTTPSSQIPSQTAAIPSTPVNSSKQAVPC 122

Query: 594  IFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIP 653
            IFFQKGLCLKGDRCAFLHGP  V  NKVPQ  ANAQ G+PPSVKKVSGGT RS QEQKIP
Sbjct: 123  IFFQKGLCLKGDRCAFLHGPPSVQTNKVPQMGANAQAGEPPSVKKVSGGTQRSSQEQKIP 182

Query: 654  RADCSKSIDGAPLKLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNESSL 713
            +A+  KSI G+ +K+ATKDETVPS +G +NEKS PPAE+AD GSRYK TN+LP +NE SL
Sbjct: 183  QANFLKSISGSSVKIATKDETVPSKIGKLNEKSIPPAEMADGGSRYKTTNALPTINECSL 242

Query: 714  SRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGH 773
            SRA+RLQ SHVIDD+GLQNGKDADEFL+E+SPGFDVLVDDELRGSGYY SEEQYGR+RGH
Sbjct: 243  SRANRLQQSHVIDDHGLQNGKDADEFLKESSPGFDVLVDDELRGSGYYGSEEQYGRSRGH 302

Query: 774  EGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQ-GQYGWDRHRSSSEKFSM 833
            EG NM SMNDY+I HS+DYKM+ DVDHDVYN+V DYDY+SRQ GQYGWD  R+SS+K S+
Sbjct: 303  EGGNMTSMNDYDINHSADYKMMGDVDHDVYNDVTDYDYESRQGGQYGWDHRRTSSDKLSL 362

Query: 834  GSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEERNYHAPRR 893
             SAQM++R+FPKSNSPEH+Q +DLRHRLNKQRRGNGLRSVINNE+ A  PEERNY + RR
Sbjct: 363  SSAQMERRIFPKSNSPEHVQNVDLRHRLNKQRRGNGLRSVINNENAASRPEERNYRSSRR 422

Query: 894  DSHLSQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGS 953
            DSH SQE++ SNRLRGRIKLPRIPSPVR+S+++PERDLNRGRPWGR  PGRSQSLS++GS
Sbjct: 423  DSHSSQESTVSNRLRGRIKLPRIPSPVRSSDIRPERDLNRGRPWGRSSPGRSQSLSNQGS 482

Query: 954  NRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALK-DKHVGTKEQQTLG 1013
            NRDE+KGRLEEDYNNE R FNG +SRR+R DGTSDFAAPKSLA LK DKH+ +KEQQTLG
Sbjct: 483  NRDEIKGRLEEDYNNERRTFNGFNSRRERTDGTSDFAAPKSLAELKGDKHIVSKEQQTLG 542

Query: 1014 KRKGSDNEQSGGELSFEGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGSIERSTTPLL 1073
            KRKG D +QSGGELSFEGPKSL EILK+KRQVK+ VD  +NN ER+    S+ERSTT  L
Sbjct: 543  KRKGFDIDQSGGELSFEGPKSLSEILKRKRQVKAAVDLPINNAERDNSERSMERSTTHQL 602

Query: 1074 KQSGLSSTAKQESNSLEGTKSSPAEAF-GLEENIDVSHHLSSQLMHSTDGHEIEAYDETL 1133
            KQS LSST K E+NSL+G KS+PAE F   EENIDV H  SSQ MHS D H IEAYDE L
Sbjct: 603  KQSVLSSTGKDETNSLDGVKSAPAETFVQEEENIDVPHRRSSQPMHSADDHGIEAYDEGL 662

Query: 1134 -EEDHEYEGDDQR-DCEYKYEQVDYGEYNYEEGENINPEEEYMDDEDGDDFAKKIGVMS 1188
             EED EYEGDDQR D EY+YEQVD GEY YEEG+NI+PEEEYMDDEDGDDFAKKIGVMS
Sbjct: 663  VEEDQEYEGDDQRDDGEYEYEQVDDGEYTYEEGDNIDPEEEYMDDEDGDDFAKKIGVMS 721

[Close]

BLAST of Cp4.1LG01g06590 vs. TrEMBL
Match: A0A0A0KPG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264282 PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.0e-200
Identity = 373/426 (87.56%), Postives = 395/426 (92.72%), Query Frame = 1


Query: 1   MDYERIQKPQAAGGGGFSPGKLRNMLLGLEKKRKEEEEELGSTYDLRSQPLPIDEAGTSG 60
           MDYERI KPQ  GGGGFSPGKLRNMLLGLEKKRKEEEEELGS YDLRSQ L IDEAG S 
Sbjct: 1   MDYERILKPQPPGGGGFSPGKLRNMLLGLEKKRKEEEEELGSIYDLRSQALQIDEAGCSA 60

Query: 61  SDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYDSGQDA 120
           SDICKDVDVVSVLPECSTSKKAD L SEM++EHRLKDN +NSRLRMQDEPS DYDSGQD 
Sbjct: 61  SDICKDVDVVSVLPECSTSKKADLLVSEMVSEHRLKDNAYNSRLRMQDEPSFDYDSGQDG 120

Query: 121 STLLTSTFEFQKSERSTRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQAGHLF 180
           STLLTS FEFQKSERS RV LGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQ Q GHLF
Sbjct: 121 STLLTSAFEFQKSERSARVPLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQTQGGHLF 180

Query: 181 GSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDS-EANFGSVAQKFVTWDANPY 240
           GSRKLGIG+G+RQPSLK+VVEVPD+KV AFEEPDTKQIDS EAN G+VAQKFV+WDANP 
Sbjct: 181 GSRKLGIGLGSRQPSLKVVVEVPDQKVTAFEEPDTKQIDSHEANIGNVAQKFVSWDANPC 240

Query: 241 TVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP 300
            VAD++GKP+LMIE+SVGESAISLSQHDSSLAIQT+TTFIPPPTTARSVSMRDMGTEMTP
Sbjct: 241 AVADSNGKPVLMIESSVGESAISLSQHDSSLAIQTSTTFIPPPTTARSVSMRDMGTEMTP 300

Query: 301 IASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQL 360
           IASQEPSRTGTPVRATTPMRSP SS+PSTPGR    SSPT A NDRVDT++ELSEKE+QL
Sbjct: 301 IASQEPSRTGTPVRATTPMRSPTSSVPSTPGRAT--SSPTAAPNDRVDTNKELSEKEIQL 360

Query: 361 KTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAWEDAEK 420
           KTRREI+VLGTQLGKLNIAAWASKEEE+KDASTSLKTVATE+P KSVIETRAAAWE+AEK
Sbjct: 361 KTRREIVVLGTQLGKLNIAAWASKEEEEKDASTSLKTVATEQPTKSVIETRAAAWEEAEK 420

Query: 421 AKYMAR 426
           AKYMAR
Sbjct: 421 AKYMAR 424

[Close]

BLAST of Cp4.1LG01g06590 vs. TrEMBL
Match: M5XNI5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001923mg PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.5e-180
Identity = 392/738 (53.12%), Postives = 492/738 (66.67%), Query Frame = 1


Query: 477  PQVLEQQQQSLP--QPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPR 536
            PQ  +QQQQ  P  QP + A EEA+KRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPR
Sbjct: 11   PQQQQQQQQQKPTQQPETTAEEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPR 70

Query: 537  DCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIP-SQTSAIPSAPV-----NSSK 596
            DCW+WLNGNCLN KC+FRHPPLDGL+G+P +T++   +P S T A P+ P      NSSK
Sbjct: 71   DCWYWLNGNCLNLKCAFRHPPLDGLLGSPAATSAGPSLPLSHTVATPTTPATHVTYNSSK 130

Query: 597  QGVPCIFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQ 656
            Q VPCIFFQKG CLKGDRCAF HGP+P+  +KVPQ  A     +P S+KKV GG  +  Q
Sbjct: 131  QAVPCIFFQKGQCLKGDRCAFSHGPNPLTGSKVPQAPATTHGTEPSSLKKVFGGLQKCTQ 190

Query: 657  EQKIPRADCSKSIDGAPL--KLATKDETVPSNVGDVNEKSGPPAEVADDGSR-YKATNSL 716
            E K+P+   SKS+ G PL  K A K +TVP   G   E++ P  +  DD +R YK T+  
Sbjct: 191  ELKVPQVSASKSV-GVPLQAKPAPKFQTVPVRNGVSIERNVPSTKALDDDARRYKTTSVP 250

Query: 717  PVLNESSLSRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEE 776
            PV N  S S+A+ L  +HV D +G QNGKDADE LRE+SPGFDVLVDDEL  S YY  E+
Sbjct: 251  PVSNGDSTSQANHLLQAHVADHHGYQNGKDADEHLRESSPGFDVLVDDELGDSDYYHGED 310

Query: 777  QYGRTRGHEGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYD-YDSRQGQYGWDRHR 836
            Q+GRTRGHEG N+ S+N+Y++   +DY  ++DVD + + +   YD YD  QGQY WD+HR
Sbjct: 311  QFGRTRGHEGRNLNSVNEYDLDRPADYNSMADVDRERFCDPRGYDPYDHMQGQYAWDQHR 370

Query: 837  SSSEKFSMGSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTA-GHPE 896
            +SSE+  +G  ++++R + KS+SPE+I  +DLRHRL+K RR NGLRS++++++   GH E
Sbjct: 371  ASSERQLVGPTRLERRGYRKSDSPENIDELDLRHRLSKHRRVNGLRSIVSHDYALDGHVE 430

Query: 897  ERNYHAPRRDSHL--SQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLP 956
            ER  + PRRDS    S E S S+RL GRIKLP    PV   +L  ER+++RGR  GRL P
Sbjct: 431  ERK-NRPRRDSQQLPSHEGSLSSRLHGRIKLPGGSPPVNGGDLHQEREVDRGRSRGRLSP 490

Query: 957  GRSQSLSHEGSNRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSD-FAAPKSLAALKDK 1016
             R+   S +G  RD +KGR+E DYNNE RNF    SRR+ MD  SD F+ PK L+ LK  
Sbjct: 491  RRAPISSQQGRLRDRIKGRVE-DYNNEERNFGAHRSRREIMDDRSDDFSRPKRLSDLKGG 550

Query: 1017 HVG-TKEQQTLGKRKG-SDN-EQSGGELSFEGPKSLGEILKKKRQV--------KSDVDP 1076
              G  KEQ  LGKRK   DN +QS G++SFEGPK L EILK+KR+         KS V+ 
Sbjct: 551  KDGENKEQSYLGKRKNVMDNYQQSEGDISFEGPKPLSEILKRKREAEAAASGSGKSFVNK 610

Query: 1077 LVNNDERERCVGSIERSTTPLLKQSGLSSTAKQESNSLEGTKSSPAEAFGLE-ENIDVSH 1136
              NN    R     +        +S L + AK+E       K +  +A G E E  DV+H
Sbjct: 611  QGNNQRESRVSDPGDSEFAVAEVKSSLPTVAKEE------PKYATEDAVGAEDEKTDVAH 670

Query: 1137 HLSSQLMHSTDGHEIEAYDETLEEDHEYEGDDQRDCEYKYEQVDYGEYNYEEGENINPEE 1187
              SSQ  ++ +  E    DE L ED E E +DQR+ +Y YEQ + G+YNYEEGEN + EE
Sbjct: 671  GQSSQGHNAGELEEGMIDDEPL-EDQEPEAEDQREGDYDYEQGEDGDYNYEEGENADGEE 730

[Close]

BLAST of Cp4.1LG01g06590 vs. TrEMBL
Match: V4U3W6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004417mg PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 5.0e-172
Identity = 380/742 (51.21%), Postives = 486/742 (65.50%), Query Frame = 1


Query: 478  QVLEQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCW 537
            Q   QQQQ +    + A EEA+KRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDC+
Sbjct: 8    QQQHQQQQQVSTASATAEEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCY 67

Query: 538  FWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSA-IPSAPV--NSSKQGVPCI 597
            FWLNGNCLNPKC FRHPPLDGL+GT  + ++ S  PS  SA +P+A    NS KQ VPCI
Sbjct: 68   FWLNGNCLNPKCGFRHPPLDGLIGTQMAVSTGSYFPSSHSATMPAAHASNNSGKQAVPCI 127

Query: 598  FFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPR 657
            FFQKGLC+KGD+CAFLHGP+   +NK PQ TA A   +PP++KK SG   +  QEQK+P 
Sbjct: 128  FFQKGLCIKGDKCAFLHGPN-TAVNKAPQPTAAAPANEPPTLKKASGVLQKCTQEQKVPP 187

Query: 658  ADCSKSIDGAP--LKLATKDET-VPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNES 717
            A+  K++   P   K   K ET  P N       + PP+   D+  RYKATN  PV+N +
Sbjct: 188  ANVPKAVVVRPEANKHTHKAETSFPRNAAGNERNAPPPSGTDDEFPRYKATNVPPVINGN 247

Query: 718  SLSRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTR 777
            SL  ++RL  +H +DD   Q+GKDADEFLRE+SPGFDVLVDDELR S YY  E+QYGRTR
Sbjct: 248  SLICSNRLHQAHALDDQSFQHGKDADEFLRESSPGFDVLVDDELRDSDYYHDEDQYGRTR 307

Query: 778  GHEGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYD---YD--SRQGQYGWDRHRSS 837
            GHEG ++ S+N+Y+IG S DY  ++++  + + +  +YD   YD  S QGQY W++H ++
Sbjct: 308  GHEGRDLNSVNEYDIGRSVDYTSLTEMGRETFRDPREYDIGSYDHISMQGQYAWEQHMAA 367

Query: 838  SEKFSMG-SAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEER 897
            S++  +G S+  ++R + KS +   I   DLR+RL+K RR NGLRSV++ ++   +  E 
Sbjct: 368  SDRVLVGDSSNQERRSYSKSETHNQINESDLRYRLSKHRRANGLRSVVSPDYAPDNQLEE 427

Query: 898  NYH--APRRDS-HL-SQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLP 957
              H  + RRDS HL SQE+S S+RL GRIK PR  S V  S+L+ ERDL RGR WG + P
Sbjct: 428  QSHRISTRRDSRHLASQESSLSSRLHGRIKPPR-RSLVSGSDLRSERDLERGRNWGSVSP 487

Query: 958  GRSQSLSHEGSNRDEMKGRLEEDYNNEGRNFNGLSSRRDRM--DGTSDFAAPKSLAALK- 1017
            GR Q+ SH+G  RD +KG LE+DY+  GRNF G    R  M  D  +DFA PKSL+ LK 
Sbjct: 488  GRPQT-SHQGRLRDRIKGTLEDDYSG-GRNFRGPRMMRREMMDDRDADFAGPKSLSELKG 547

Query: 1018 DKHVGTKEQQTLGKRKG-SDNEQSGGELSFEGPKSLGEILKKKRQV---------KSDVD 1077
             K+  +KEQQ+L KRK   D+ Q  G LSF+GP  L EILK+KR           KS  +
Sbjct: 548  KKNAESKEQQSLRKRKSLEDHRQPEGGLSFDGPMPLSEILKRKRGAGGATSASTEKSSAN 607

Query: 1078 PLVNNDERERCVGSIERSTTPLLKQSGLSSTAKQESNSLEGTKSSPAEAFGLEENIDVSH 1137
              V N +  +  GS+  S+     QS +S+ +K+ SN  E       E        + +H
Sbjct: 608  MEVENQKESQ--GSLVGSSNNTAAQSAVSTVSKEVSNYKEAGAVKETEG-----KNEATH 667

Query: 1138 HLSSQLMHSTDGHEIEAYDETLE----EDHEYEGDDQRDCEYKYEQVDYGEYNYEEGENI 1187
              SSQL +++   E+EA D  +     EDH+ E DD RD EY+YEQ D G+YNYEEGEN 
Sbjct: 668  DKSSQLPNAS---EVEAEDGMIAEEGIEDHDLEADDLRDGEYEYEQGDEGDYNYEEGENA 727

[Close]

BLAST of Cp4.1LG01g06590 vs. TrEMBL
Match: A0A061EFX7_THECC (CCCH-type zinc finger family protein, putative OS=Theobroma cacao GN=TCM_011094 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.4e-168
Identity = 384/760 (50.53%), Postives = 491/760 (64.61%), Query Frame = 1


Query: 478  QVLEQQQQSLPQPLSAA-----------NEEAVKRNTDCVYFLASPLTCKKGSECEYRHS 537
            Q  +QQQQ   Q  +AA            EEA+KRNTDCVYFLASPLTCKKGSECEYRHS
Sbjct: 15   QQQQQQQQQQKQAAAAAAAVAGATKTSAEEEALKRNTDCVYFLASPLTCKKGSECEYRHS 74

Query: 538  EYARVNPRDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPS-QTSAIPSAPV- 597
            EYARVNPRDC+FWLNGNCLNPKC FRHPPLDGL+GT  + ++ S I S Q +A P+A   
Sbjct: 75   EYARVNPRDCYFWLNGNCLNPKCGFRHPPLDGLLGTQVAASAGSSISSSQMAATPTAAAH 134

Query: 598  ---------NSSKQGVPCIFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPS 657
                     NSSKQ VPCIFFQKGLCLKGDRCAFLHGP+    NK PQ  A     +P S
Sbjct: 135  TLYNQGASSNSSKQAVPCIFFQKGLCLKGDRCAFLHGPTT--NNKAPQPAAATPATEPHS 194

Query: 658  VKKVSGGTLRSGQEQKIPRADCSK----SIDGAPLKLATKDETVPSNVGDVNEKSGP-PA 717
            +KK  G  L + Q QK P ++ SK    S++G P   A K E V    G   E+S P PA
Sbjct: 195  LKKAFGA-LETSQLQKFPPSNVSKTVGVSLEGKP---APKVEAVSGRTGAGIERSVPCPA 254

Query: 718  EVADDGSRYKATNSLPVLNESSLSRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVL 777
               ++  R+K  N   V+N  S+ R+SRL  +H   +     GKD DEFLRE+SPGFDVL
Sbjct: 255  GSDEELPRHKGANITQVVNGGSVGRSSRLHQAHASVEQSFHAGKDTDEFLRESSPGFDVL 314

Query: 778  VDDELRGSGYYESEEQYGRTRGHEGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYD 837
            VDDELR S +Y  E+QYG TRGHEG N   +N+Y+IG S++Y  ++DVD +++ +   YD
Sbjct: 315  VDDELRDSDFYHGEDQYGGTRGHEGRN---VNEYDIGRSANYDAMADVDREMFRDARGYD 374

Query: 838  -YDSRQGQYGWDRHRSSSEKFSMGSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGL 897
             +D  QG YGWD+ R+SSE+ S+G + +++R +   +SP+ ++  DLR+ L+K RR NGL
Sbjct: 375  SFDHVQGHYGWDQQRASSERISLGPSTLERRGYSVVDSPDPVEESDLRYHLSKHRRFNGL 434

Query: 898  RSVINNEHT-AGHPEERNYHAPRRDSH--LSQENSTSNRLRGRIKLPRIPSPVRNSNLQP 957
            RSV++++H    H EERNY    RDSH     E+S S+RLRGRIKLP   S V  ++L  
Sbjct: 435  RSVVSHDHAFENHEEERNYRGSLRDSHHLPGHESSLSSRLRGRIKLPG-RSLVNGTDLHS 494

Query: 958  ERDLNRGRPWGRLLPGRSQSLSHEGSNRDEMKGRLEEDYNN-EGRNFNGLSSRRDRMD-G 1017
            ER++ RGR WG+L PG+ Q+ SH+G   D +KGR+E +YNN EGRNF G  +RRD MD  
Sbjct: 495  EREIERGRNWGQLSPGKPQTSSHQGRLHDRIKGRVEGEYNNKEGRNFRGPRTRRDIMDES 554

Query: 1018 TSDFAAPKSLAALK-DKHVGTKEQQTLGKRKG-SDNEQSGGELSFEGPKSLGEILKKKRQ 1077
             ++FA PKSLA LK  K+   KEQQ+LGKRK   + +Q+ G+LSFEGP  L EILK+KRQ
Sbjct: 555  NANFAGPKSLAELKVGKNTENKEQQSLGKRKNIEEYQQTEGDLSFEGPMPLSEILKRKRQ 614

Query: 1078 -----VKSDVDPLVNND-----ERERCVGSIERSTTPLLKQSGLSSTAKQESNSLEGTKS 1137
                   S + P+   D      +E  +GS   ST  ++      S   +E+N  E +KS
Sbjct: 615  SGAAASGSGIAPVNKEDINQKQSKESLIGS---STNTVV------SPTLEEANKKEESKS 674

Query: 1138 SPAEAFGLEENIDVSHHLSSQLMHSTDGHEIE---AYDETLEEDHEYEGDDQRDCEYKYE 1187
            + AE+  +E    + H  SSQL +++  HE E     DE + EDHE E DDQRD +Y YE
Sbjct: 675  TIAESGKME----IVHGESSQLRNASK-HEAEDGMIGDERM-EDHELEADDQRDGDYYYE 734

[Close]

BLAST of Cp4.1LG01g06590 vs. TAIR10
Match: AT2G02170.1 (AT2G02170.1 Remorin family protein)

HSP 1 Score: 407.1 bits (1045), Expect = 3.6e-113
Identity = 274/523 (52.39%), Postives = 341/523 (65.20%), Query Frame = 1


Query: 1   MDYERIQKPQA-AGGGGFSPGKLRNMLL-GLEKKRKEEEEELGSTYDLRSQPLPIDEAGT 60
           MDYERI K Q  + GGGFSPGKLR+MLL G+++K+ EEEE   ST  +RS    ID+   
Sbjct: 1   MDYERIGKTQVTSSGGGFSPGKLRSMLLLGVDRKKNEEEE---STPTMRSGSNQIDDPRV 60

Query: 61  ---SGSDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYD 120
              SG D CKDVDVVS + +CSTS  A S+                  L +Q+    DYD
Sbjct: 61  YVASGLDDCKDVDVVSEITDCSTSGIARSIS-----------------LGLQEYS--DYD 120

Query: 121 SGQDASTL-LTSTFEFQKSER---STRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQ 180
           +  +  ++  +S FEFQK+E+   + R+ +  FSKPAPSKWDDAQKWIASPT+NRPKTGQ
Sbjct: 121 NVNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPTANRPKTGQ 180

Query: 181 SQMQAGHLFGSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDSEANFGSVAQKF 240
            Q+      GS+K G   G RQ S+KIV EV + +V   EEPDTK+ID       +  KF
Sbjct: 181 VQVP-----GSKK-GPSFG-RQSSMKIV-EVAEHRVV--EEPDTKRIDVSQVKKDMGNKF 240

Query: 241 VTWDANPYTVADTHGKPMLMIENSVGESA--ISLSQHDSSLAIQTATTFIPPPTTARSVS 300
            +W+ + YT  D++ KP+LM+ENS+ ESA  ++LS+HDSS+A    T F  PP+TARSVS
Sbjct: 241 GSWEVDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVA----TAFAQPPSTARSVS 300

Query: 301 MRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTD 360
           MRDMGTEMTPIASQEPSR GTP+RATTP+RSP SS PS+PGR A  S  +         +
Sbjct: 301 MRDMGTEMTPIASQEPSRNGTPIRATTPIRSPISSEPSSPGRQASASPMS---------N 360

Query: 361 QELSEKEMQLKTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIET 420
           +ELSEKE+Q+KTRREIMVLGTQLGK NIAAWASKE+EDKDASTSLKT A+ + +KSV E 
Sbjct: 361 KELSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSEA 420

Query: 421 RAAAWEDAEKAKYMARMR--------------------------------GQAHDKLMNK 480
           RA AWE+AEKAK+MAR R                                G+A D+LM K
Sbjct: 421 RATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDRLMKK 478

[Close]

BLAST of Cp4.1LG01g06590 vs. TAIR10
Match: AT2G02160.1 (AT2G02160.1 CCCH-type zinc finger family protein)

HSP 1 Score: 300.8 bits (769), Expect = 3.6e-81
Identity = 266/725 (36.69%), Postives = 366/725 (50.48%), Query Frame = 1


Query: 481  EQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWFWL 540
            EQ++QS  + +S+A E+A+K NTDCVYFLASPLTCKKG ECEYRHSEYAR+NPRDC++WL
Sbjct: 13   EQKKQS--ETVSSAEEDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWL 72

Query: 541  NGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIP-SQTSAIPSAPVNSSKQGVPCIFFQKG 600
            NGNCLNPKC FRHPPL+GL+G      + S  P   T+  PS     +KQ VPC+FFQKG
Sbjct: 73   NGNCLNPKCGFRHPPLEGLLGNQGGAPAVSVQPIHATAQHPSV----AKQPVPCLFFQKG 132

Query: 601  LCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIPRADCSK 660
            +C+KGD C+FLH P+P    K     A   T    S K +   T    +E+K+P  + SK
Sbjct: 133  MCMKGDMCSFLHTPNPAAYKKQHPVEAKPATDPQCSKKPIENNT----EEKKLPDVNLSK 192

Query: 661  SIDGAPLKLATKDETVPSNVGDVNEKSG-PPAEVADDGSRYKATNSLPVLNESSLSRASR 720
             + G    ++       + + D     G  P  V  +    +     P   E   S    
Sbjct: 193  VVKG-HTDISAAPRVASTGLRDSRSVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHS-TQL 252

Query: 721  LQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGHEGTNM 780
            LQ     D+    NGKDAD+ LRE+SPGFDVLVD+E   S YY  E++YGR     G + 
Sbjct: 253  LQKYGSDDNNSFHNGKDADDVLRESSPGFDVLVDNEAGDSEYYHVEDRYGRRSQERGNS- 312

Query: 781  ISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQGQYGWDRHRSSSEKFSMGSAQMD 840
                     +  D+  I+D D +         YD R+ + GW   R SSE+      ++D
Sbjct: 313  --------EYDPDFSAIADGDKEALREQRFDSYDRREDR-GWGHRRVSSER----EDRLD 372

Query: 841  KRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLR-SVINNEHTAGHPE-ERNYHAPRRDSHL 900
            +R++ +    E+I   DLR+RL KQR+GNG+R SV  +++ A     +R Y   RRD+  
Sbjct: 373  RRVYAEDERSENILESDLRYRLAKQRKGNGMRLSVGGHDYAAPDSSMDRGYRESRRDT-- 432

Query: 901  SQENS-TSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGSNRD 960
             +ENS +S+RL+GRIKL         SN +     +R    GR    RS+ L  +G  RD
Sbjct: 433  PRENSISSSRLQGRIKLR------ERSNGEEGHHFDRRSERGR---DRSE-LPSQGRLRD 492

Query: 961  EMKGRLEEDYN-NEGRNFNGLSSRRDRMDGTSDFAAPKSLAALKDKHVGTKEQQTLGKRK 1020
             +KGRLEE+++ N+ R F    +RR  M+     +APKS          +K + +LGKRK
Sbjct: 493  RIKGRLEENHSGNQERGFGAPWARRREMEDERK-SAPKS------SREESKPEPSLGKRK 552

Query: 1021 GSDNEQSGGEL---SFEGPKSLGEILKKKRQVKSDVDPLVNNDE---RERCVGSIERSTT 1080
              + +    +    SF  P    EILK+K+   S      N DE   +E     I+  T 
Sbjct: 553  SFEEDHHSHKRSRDSFAAPLPFSEILKRKKAAASGGSRNNNKDETISKEEAGDEIKLITE 612

Query: 1081 PLLKQSGLSSTAKQESNSLEGTKSSPAEAFGLEENIDVSHHLSSQLMHSTDGHEIEAYDE 1140
               +++ + S  K E    EGT     E  G                        E   E
Sbjct: 613  ---EKTEVVSEPKAEVEE-EGTVMEEEEIVG------------------------EEVYE 663

Query: 1141 TLEEDHEYEGDDQRDCEYKYE---QVDYGEYNYEEGENI-----NPEEEYMDDEDG---D 1183
              E++  YEGD+    EY YE   + + GEY YEEGE +       EEE  +  +G   +
Sbjct: 673  GNEDEQAYEGDELNG-EYYYEEGYEEEGGEYAYEEGEEVVYAAEEGEEEATEGGEGEGEE 663

[Close]

BLAST of Cp4.1LG01g06590 vs. TAIR10
Match: AT1G30320.1 (AT1G30320.1 Remorin family protein)

HSP 1 Score: 167.2 bits (422), Expect = 6.3e-41
Identity = 188/543 (34.62%), Postives = 254/543 (46.78%), Query Frame = 1


Query: 1   MDYERIQKPQAAGGGGFSPGKLRNMLLGL--------------------EKKRKEEEEEL 60
           MDYERIQK Q +     SP KLR  L+G                      + +  ++ E 
Sbjct: 1   MDYERIQKVQKSI---ISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEF 60

Query: 61  GSTYDLRSQPLPIDEAGTSGSDI--CKDVDVVSVLPECSTSKKADSL---------DSEM 120
                L S     D+   + +DI   K  +   + P  + ++ +            D   
Sbjct: 61  SKNSLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCEGVVPRENDQPR 120

Query: 121 INEHRLKDNTHNSR--LRMQDEPSLDYDSGQDASTLLTSTFEFQKS--ERSTRV--TLGP 180
           + + R  D    S   +R Q++ +LDYDS   +S+     FEF ++  ERS +   + G 
Sbjct: 121 LQQFRKGDLNMASPHIMRPQEDENLDYDSNASSSS-----FEFHRARGERSNQNHGSRGY 180

Query: 181 FSKPAPSKWDDAQKWIASPTSN-RPKTGQSQMQAGHLFGSRKLGIGIGNRQPSLKIVVEV 240
            S+  PSKW+DA+KWI S  +    K GQ                  GNR P    V  V
Sbjct: 181 PSRQMPSKWNDAEKWIMSRQNMVMRKNGQ------------------GNRIP----VRIV 240

Query: 241 PDRKVAAFEEPDTKQIDSEANFGSVAQKFVTWDANPYTVADTHGKPMLMIENSVGESAIS 300
           PD   A +E   ++    +++     +KF         V  +   P+L  E   G+S I 
Sbjct: 241 PDN--AGYEHNKSRMDLCQSSQVDGFEKFPN-------VVPSAPHPILTQEYG-GDSLID 300

Query: 301 LSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPN 360
            S   + LA  +       P   RSV MRDMGTEMTPI SQEPSR+ TPV ATTP+RSP 
Sbjct: 301 QSTQSNDLADSSHDHTTGGPAI-RSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPT 360

Query: 361 SSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQLKTRREIMVLGTQLGKLNIAAWAS 420
           SSLPSTP  G P  S  +      +T +ELSE+E + KTRREI+ LG QLGK+NIAAWAS
Sbjct: 361 SSLPSTPRGGQPEESSMSK-----NTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWAS 420

Query: 421 KEEEDK-----DASTSLK------TVATERPAKSVI-------ETRAAAWEDAEKAKYMA 478
           KEEE+      DA  + K        A E   KS         E R  AWE  EKAK  A
Sbjct: 421 KEEEENKKNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEA 480

[Close]

BLAST of Cp4.1LG01g06590 vs. TAIR10
Match: AT1G67590.1 (AT1G67590.1 Remorin family protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-21
Identity = 110/363 (30.30%), Postives = 155/363 (42.70%), Query Frame = 1


Query: 120 ASTLLTSTFEFQKSERST----RVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQ 179
           A+  +++ FEFQK    T    R T+G   KPAPSKWDDAQKW++     R   G     
Sbjct: 15  ATPEISNGFEFQKGSNRTPNHHRSTMG---KPAPSKWDDAQKWLSGVGFARGGGGGGDKS 74

Query: 180 AGHLFGSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDSEANFGSVAQKFVTWD 239
           + H   ++       +             R +A+  + + +  D          ++V +D
Sbjct: 75  SHHSRSNKPRNSNADDL------------RLIASASQREREGED----------QYVEYD 134

Query: 240 ANPYTVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGT 299
                            E + G   +     D   ++    + I P    RSV +RDMGT
Sbjct: 135 DE---------------EMAAGRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGT 194

Query: 300 EMTPIASQEPSRTGTPVRATTPM-RSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSE 359
           EMTPI SQEPSRT TPVRATTP+ RSP +S      RG  +        +    +   SE
Sbjct: 195 EMTPIGSQEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSE 254

Query: 360 KEMQLKTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAW 419
           K       ++ M        +   A A  E E        K    +  A    E R A  
Sbjct: 255 KVNGFVESKKAM------SAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEM 314

Query: 420 EDAEKAKYMARMRGQAHDKLMNKLAAVRHKAEEKLAAAEVKRNRQATIAEQQADYIRQTG 478
           E  +      RM+ +A +KL NKLAA +  AEE+ A AE K N +A    ++ADYIR++G
Sbjct: 315 EMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSG 331

[Close]

BLAST of Cp4.1LG01g06590 vs. NCBI nr
Match: gi|659120513|ref|XP_008460229.1| (PREDICTED: zinc finger CCCH domain-containing protein 17 [Cucumis melo])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 572/718 (79.67%), Postives = 628/718 (87.47%), Query Frame = 1


Query: 474  GGGPQVLEQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 533
            GGGPQVLEQ  QSLPQ  SAA EEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP
Sbjct: 3    GGGPQVLEQPPQSLPQSTSAAEEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 62

Query: 534  RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPC 593
            RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHST  SSQIPSQTS+IPSAPVNSSKQ VPC
Sbjct: 63   RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTTPSSQIPSQTSSIPSAPVNSSKQAVPC 122

Query: 594  IFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIP 653
            IFFQKGLCLKGDRCAFLHGP PV  NKVPQ  +NAQ G+PPSVKKVSGGT R+ QEQKIP
Sbjct: 123  IFFQKGLCLKGDRCAFLHGPPPVQTNKVPQMGSNAQAGEPPSVKKVSGGTQRNSQEQKIP 182

Query: 654  RADCSKSIDGAPLKLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNESSL 713
            +A+ SKSI G+ +KLA KDETVPS +G +NEKS PPAE+AD GSRYK+TN+LP +NE  L
Sbjct: 183  QANFSKSIGGSSIKLAMKDETVPSKIGKLNEKSIPPAEMADGGSRYKSTNALPTINECLL 242

Query: 714  SRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGH 773
            SRA+RLQ SHVIDD+GLQNGKDADEFL+E+SPGFDVLVDDELRGSGYY SEEQYGR+RGH
Sbjct: 243  SRANRLQQSHVIDDHGLQNGKDADEFLKESSPGFDVLVDDELRGSGYYGSEEQYGRSRGH 302

Query: 774  EGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQ-GQYGWDRHRSSSEKFSM 833
            EG NM SMNDY+IGHS+DYKM+ DVDHDVYN+V D+DY+SRQ GQYGWD  R+SS+K S+
Sbjct: 303  EGGNMTSMNDYDIGHSADYKMMGDVDHDVYNDVTDFDYESRQGGQYGWDHRRTSSDKLSL 362

Query: 834  GSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEERNYHAPRR 893
             SAQM++RLFPKSNSPEH+Q +DLRHRLNKQRRGNGLRSVINNE+ A  PEERNY + RR
Sbjct: 363  SSAQMERRLFPKSNSPEHVQNVDLRHRLNKQRRGNGLRSVINNENAASRPEERNYRSSRR 422

Query: 894  DSHLSQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGS 953
            DSH SQE++ SNRLRGRIKLPRIPSPVR+SN++PERDLNRGRPWGR  PGRSQSLS++GS
Sbjct: 423  DSHSSQESTVSNRLRGRIKLPRIPSPVRSSNIRPERDLNRGRPWGRSSPGRSQSLSNQGS 482

Query: 954  NRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALK-DKHVGTKEQQTLG 1013
            NRDE+KGRLEEDYNNE R FNG +SRR+RMDGTSDFAAPKSLA LK DKH+  KEQQTLG
Sbjct: 483  NRDEIKGRLEEDYNNERRTFNGFNSRRERMDGTSDFAAPKSLAELKGDKHMVMKEQQTLG 542

Query: 1014 KRKGSDNEQSGGELSFEGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGSIERSTTPLL 1073
            KRKG D EQSGGELSFEGPK L EILK+KRQVK+ VD  +NN ERE    S+ERSTT  L
Sbjct: 543  KRKGFDIEQSGGELSFEGPKPLSEILKRKRQVKAVVDLPINNAERENSERSMERSTTHPL 602

Query: 1074 KQSGLSSTAKQESNSLEGTKSSPAEAFGLEENIDVSHHLSSQLMHSTDGHEIEAYDETL- 1133
            KQS LSST K E+NSL G KS+PAE F  EE++DV H  SSQ MHSTD H IEAYDE L 
Sbjct: 603  KQSVLSSTGKDETNSLGGIKSAPAETFVQEEDVDVPHRHSSQPMHSTDDHGIEAYDEGLV 662

Query: 1134 EEDHEYEGDDQR-DCEYKYEQVDYGEYNYEEGENINPEEEYMDDEDGDDFAKKIGVMS 1188
            EED EYEGDDQR D EY+YEQVD GEY YEEG+NI+PEEEYMDDEDGDDFAKKIGVMS
Sbjct: 663  EEDQEYEGDDQRDDGEYEYEQVDDGEYTYEEGDNIDPEEEYMDDEDGDDFAKKIGVMS 720

[Close]

BLAST of Cp4.1LG01g06590 vs. NCBI nr
Match: gi|449445373|ref|XP_004140447.1| (PREDICTED: zinc finger CCCH domain-containing protein 17 [Cucumis sativus])

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 568/719 (79.00%), Postives = 626/719 (87.07%), Query Frame = 1


Query: 474  GGGPQVLEQQQQSLPQPLSAANEEAVKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 533
            GGGPQVLEQ  QSLPQ  SAA EEA+KRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP
Sbjct: 3    GGGPQVLEQPPQSLPQSTSAAEEEAIKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNP 62

Query: 534  RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTNSSSQIPSQTSAIPSAPVNSSKQGVPC 593
            RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHST  SSQIPSQT+AIPS PVNSSKQ VPC
Sbjct: 63   RDCWFWLNGNCLNPKCSFRHPPLDGLVGTPHSTTPSSQIPSQTAAIPSTPVNSSKQAVPC 122

Query: 594  IFFQKGLCLKGDRCAFLHGPSPVPMNKVPQTTANAQTGKPPSVKKVSGGTLRSGQEQKIP 653
            IFFQKGLCLKGDRCAFLHGP  V  NKVPQ  ANAQ G+PPSVKKVSGGT RS QEQKIP
Sbjct: 123  IFFQKGLCLKGDRCAFLHGPPSVQTNKVPQMGANAQAGEPPSVKKVSGGTQRSSQEQKIP 182

Query: 654  RADCSKSIDGAPLKLATKDETVPSNVGDVNEKSGPPAEVADDGSRYKATNSLPVLNESSL 713
            +A+  KSI G+ +K+ATKDETVPS +G +NEKS PPAE+AD GSRYK TN+LP +NE SL
Sbjct: 183  QANFLKSISGSSVKIATKDETVPSKIGKLNEKSIPPAEMADGGSRYKTTNALPTINECSL 242

Query: 714  SRASRLQPSHVIDDYGLQNGKDADEFLRETSPGFDVLVDDELRGSGYYESEEQYGRTRGH 773
            SRA+RLQ SHVIDD+GLQNGKDADEFL+E+SPGFDVLVDDELRGSGYY SEEQYGR+RGH
Sbjct: 243  SRANRLQQSHVIDDHGLQNGKDADEFLKESSPGFDVLVDDELRGSGYYGSEEQYGRSRGH 302

Query: 774  EGTNMISMNDYEIGHSSDYKMISDVDHDVYNNVIDYDYDSRQ-GQYGWDRHRSSSEKFSM 833
            EG NM SMNDY+I HS+DYKM+ DVDHDVYN+V DYDY+SRQ GQYGWD  R+SS+K S+
Sbjct: 303  EGGNMTSMNDYDINHSADYKMMGDVDHDVYNDVTDYDYESRQGGQYGWDHRRTSSDKLSL 362

Query: 834  GSAQMDKRLFPKSNSPEHIQTMDLRHRLNKQRRGNGLRSVINNEHTAGHPEERNYHAPRR 893
             SAQM++R+FPKSNSPEH+Q +DLRHRLNKQRRGNGLRSVINNE+ A  PEERNY + RR
Sbjct: 363  SSAQMERRIFPKSNSPEHVQNVDLRHRLNKQRRGNGLRSVINNENAASRPEERNYRSSRR 422

Query: 894  DSHLSQENSTSNRLRGRIKLPRIPSPVRNSNLQPERDLNRGRPWGRLLPGRSQSLSHEGS 953
            DSH SQE++ SNRLRGRIKLPRIPSPVR+S+++PERDLNRGRPWGR  PGRSQSLS++GS
Sbjct: 423  DSHSSQESTVSNRLRGRIKLPRIPSPVRSSDIRPERDLNRGRPWGRSSPGRSQSLSNQGS 482

Query: 954  NRDEMKGRLEEDYNNEGRNFNGLSSRRDRMDGTSDFAAPKSLAALK-DKHVGTKEQQTLG 1013
            NRDE+KGRLEEDYNNE R FNG +SRR+R DGTSDFAAPKSLA LK DKH+ +KEQQTLG
Sbjct: 483  NRDEIKGRLEEDYNNERRTFNGFNSRRERTDGTSDFAAPKSLAELKGDKHIVSKEQQTLG 542

Query: 1014 KRKGSDNEQSGGELSFEGPKSLGEILKKKRQVKSDVDPLVNNDERERCVGSIERSTTPLL 1073
            KRKG D +QSGGELSFEGPKSL EILK+KRQVK+ VD  +NN ER+    S+ERSTT  L
Sbjct: 543  KRKGFDIDQSGGELSFEGPKSLSEILKRKRQVKAAVDLPINNAERDNSERSMERSTTHQL 602

Query: 1074 KQSGLSSTAKQESNSLEGTKSSPAEAF-GLEENIDVSHHLSSQLMHSTDGHEIEAYDETL 1133
            KQS LSST K E+NSL+G KS+PAE F   EENIDV H  SSQ MHS D H IEAYDE L
Sbjct: 603  KQSVLSSTGKDETNSLDGVKSAPAETFVQEEENIDVPHRRSSQPMHSADDHGIEAYDEGL 662

Query: 1134 -EEDHEYEGDDQR-DCEYKYEQVDYGEYNYEEGENINPEEEYMDDEDGDDFAKKIGVMS 1188
             EED EYEGDDQR D EY+YEQVD GEY YEEG+NI+PEEEYMDDEDGDDFAKKIGVMS
Sbjct: 663  VEEDQEYEGDDQRDDGEYEYEQVDDGEYTYEEGDNIDPEEEYMDDEDGDDFAKKIGVMS 721

[Close]

BLAST of Cp4.1LG01g06590 vs. NCBI nr
Match: gi|659120515|ref|XP_008460230.1| (PREDICTED: uncharacterized protein LOC103499112 [Cucumis melo])

HSP 1 Score: 778.1 bits (2008), Expect = 2.2e-221
Identity = 422/512 (82.42%), Postives = 444/512 (86.72%), Query Frame = 1


Query: 1   MDYERIQKPQAAGGGGFSPGKLRNMLLGLEKKRKEEEEELGSTYDLRSQPLPIDEAGTSG 60
           MDYERI KPQ  GGGGFSPGKLRNMLLGLEKKRKEEEEELGS YDLRSQ L IDEAG+SG
Sbjct: 1   MDYERILKPQPPGGGGFSPGKLRNMLLGLEKKRKEEEEELGSIYDLRSQALQIDEAGSSG 60

Query: 61  SDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYDSGQDA 120
           SDICKDVDVVSVLPECSTS KADSL SE+++EHRLKDN +NSRLRMQDEPS D DSGQD 
Sbjct: 61  SDICKDVDVVSVLPECSTSIKADSLVSEIVSEHRLKDNAYNSRLRMQDEPSFDIDSGQDG 120

Query: 121 STLLTSTFEFQKSERSTRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQAGHLF 180
           STLLTSTFEFQKSERS RV LGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQ Q GHLF
Sbjct: 121 STLLTSTFEFQKSERSARVPLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQTQGGHLF 180

Query: 181 GSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDS-EANFGSVAQKFVTWDANPY 240
           GSRKLGIG+G+RQPSLK+VVEVPDRKV +FEEPDTKQIDS EAN GSVAQKFV WDANP 
Sbjct: 181 GSRKLGIGLGSRQPSLKVVVEVPDRKVTSFEEPDTKQIDSHEANIGSVAQKFVCWDANPC 240

Query: 241 TVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP 300
            VAD+ GKP LMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP
Sbjct: 241 AVADSSGKPALMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP 300

Query: 301 IASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQL 360
           IASQEPSRTGTPVRATTPMRSP SS+PSTPGRGAP SSPTTA  + VDT++ELSEKE+QL
Sbjct: 301 IASQEPSRTGTPVRATTPMRSPTSSVPSTPGRGAPTSSPTTAPIEHVDTNKELSEKEIQL 360

Query: 361 KTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAWEDAEK 420
           KTRREI+VLGTQLGKLNIAAWASKEEE+KDASTSLKTVATE+P KSVIETRAAAWE+AEK
Sbjct: 361 KTRREIVVLGTQLGKLNIAAWASKEEEEKDASTSLKTVATEQPIKSVIETRAAAWEEAEK 420

Query: 421 AKYMA--------------------------------RMRGQAHDKLMNKLAAVRHKAEE 480
           AKYMA                                RMRGQAHD+L NKLAAVRHKAEE
Sbjct: 421 AKYMARFKREEMKIQAWENHQKAKTEAEMRRVEVKIERMRGQAHDRLTNKLAAVRHKAEE 480

[Close]

BLAST of Cp4.1LG01g06590 vs. NCBI nr
Match: gi|449445288|ref|XP_004140405.1| (PREDICTED: uncharacterized protein LOC101221140 [Cucumis sativus])

HSP 1 Score: 770.4 bits (1988), Expect = 4.6e-219
Identity = 418/512 (81.64%), Postives = 443/512 (86.52%), Query Frame = 1


Query: 1   MDYERIQKPQAAGGGGFSPGKLRNMLLGLEKKRKEEEEELGSTYDLRSQPLPIDEAGTSG 60
           MDYERI KPQ  GGGGFSPGKLRNMLLGLEKKRKEEEEELGS YDLRSQ L IDEAG S 
Sbjct: 1   MDYERILKPQPPGGGGFSPGKLRNMLLGLEKKRKEEEEELGSIYDLRSQALQIDEAGCSA 60

Query: 61  SDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYDSGQDA 120
           SDICKDVDVVSVLPECSTSKKAD L SEM++EHRLKDN +NSRLRMQDEPS DYDSGQD 
Sbjct: 61  SDICKDVDVVSVLPECSTSKKADLLVSEMVSEHRLKDNAYNSRLRMQDEPSFDYDSGQDG 120

Query: 121 STLLTSTFEFQKSERSTRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQAGHLF 180
           STLLTS FEFQKSERS RV LGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQ Q GHLF
Sbjct: 121 STLLTSAFEFQKSERSARVPLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQTQGGHLF 180

Query: 181 GSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDS-EANFGSVAQKFVTWDANPY 240
           GSRKLGIG+G+RQPSLK+VVEVPD+KV AFEEPDTKQIDS EAN G+VAQKFV+WDANP 
Sbjct: 181 GSRKLGIGLGSRQPSLKVVVEVPDQKVTAFEEPDTKQIDSHEANIGNVAQKFVSWDANPC 240

Query: 241 TVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP 300
            VAD++GKP+LMIE+SVGESAISLSQHDSSLAIQT+TTFIPPPTTARSVSMRDMGTEMTP
Sbjct: 241 AVADSNGKPVLMIESSVGESAISLSQHDSSLAIQTSTTFIPPPTTARSVSMRDMGTEMTP 300

Query: 301 IASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQL 360
           IASQEPSRTGTPVRATTPMRSP SS+PSTPGR    SSPT A NDRVDT++ELSEKE+QL
Sbjct: 301 IASQEPSRTGTPVRATTPMRSPTSSVPSTPGRAT--SSPTAAPNDRVDTNKELSEKEIQL 360

Query: 361 KTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAWEDAEK 420
           KTRREI+VLGTQLGKLNIAAWASKEEE+KDASTSLKTVATE+P KSVIETRAAAWE+AEK
Sbjct: 361 KTRREIVVLGTQLGKLNIAAWASKEEEEKDASTSLKTVATEQPTKSVIETRAAAWEEAEK 420

Query: 421 AKYMA--------------------------------RMRGQAHDKLMNKLAAVRHKAEE 480
           AKYMA                                RMRGQAHD+L NKLAAVRHKAEE
Sbjct: 421 AKYMARFKREEMKIQAWENHQKAKTEAEMRRVEVKIERMRGQAHDRLTNKLAAVRHKAEE 480

[Close]

BLAST of Cp4.1LG01g06590 vs. NCBI nr
Match: gi|700195617|gb|KGN50794.1| (hypothetical protein Csa_5G264282 [Cucumis sativus])

HSP 1 Score: 708.0 bits (1826), Expect = 2.8e-200
Identity = 373/426 (87.56%), Postives = 395/426 (92.72%), Query Frame = 1


Query: 1   MDYERIQKPQAAGGGGFSPGKLRNMLLGLEKKRKEEEEELGSTYDLRSQPLPIDEAGTSG 60
           MDYERI KPQ  GGGGFSPGKLRNMLLGLEKKRKEEEEELGS YDLRSQ L IDEAG S 
Sbjct: 1   MDYERILKPQPPGGGGFSPGKLRNMLLGLEKKRKEEEEELGSIYDLRSQALQIDEAGCSA 60

Query: 61  SDICKDVDVVSVLPECSTSKKADSLDSEMINEHRLKDNTHNSRLRMQDEPSLDYDSGQDA 120
           SDICKDVDVVSVLPECSTSKKAD L SEM++EHRLKDN +NSRLRMQDEPS DYDSGQD 
Sbjct: 61  SDICKDVDVVSVLPECSTSKKADLLVSEMVSEHRLKDNAYNSRLRMQDEPSFDYDSGQDG 120

Query: 121 STLLTSTFEFQKSERSTRVTLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQMQAGHLF 180
           STLLTS FEFQKSERS RV LGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQ Q GHLF
Sbjct: 121 STLLTSAFEFQKSERSARVPLGPFSKPAPSKWDDAQKWIASPTSNRPKTGQSQTQGGHLF 180

Query: 181 GSRKLGIGIGNRQPSLKIVVEVPDRKVAAFEEPDTKQIDS-EANFGSVAQKFVTWDANPY 240
           GSRKLGIG+G+RQPSLK+VVEVPD+KV AFEEPDTKQIDS EAN G+VAQKFV+WDANP 
Sbjct: 181 GSRKLGIGLGSRQPSLKVVVEVPDQKVTAFEEPDTKQIDSHEANIGNVAQKFVSWDANPC 240

Query: 241 TVADTHGKPMLMIENSVGESAISLSQHDSSLAIQTATTFIPPPTTARSVSMRDMGTEMTP 300
            VAD++GKP+LMIE+SVGESAISLSQHDSSLAIQT+TTFIPPPTTARSVSMRDMGTEMTP
Sbjct: 241 AVADSNGKPVLMIESSVGESAISLSQHDSSLAIQTSTTFIPPPTTARSVSMRDMGTEMTP 300

Query: 301 IASQEPSRTGTPVRATTPMRSPNSSLPSTPGRGAPISSPTTAANDRVDTDQELSEKEMQL 360
           IASQEPSRTGTPVRATTPMRSP SS+PSTPGR    SSPT A NDRVDT++ELSEKE+QL
Sbjct: 301 IASQEPSRTGTPVRATTPMRSPTSSVPSTPGRAT--SSPTAAPNDRVDTNKELSEKEIQL 360

Query: 361 KTRREIMVLGTQLGKLNIAAWASKEEEDKDASTSLKTVATERPAKSVIETRAAAWEDAEK 420
           KTRREI+VLGTQLGKLNIAAWASKEEE+KDASTSLKTVATE+P KSVIETRAAAWE+AEK
Sbjct: 361 KTRREIVVLGTQLGKLNIAAWASKEEEEKDASTSLKTVATEQPTKSVIETRAAAWEEAEK 420

Query: 421 AKYMAR 426
           AKYMAR
Sbjct: 421 AKYMAR 424

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g06590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H17_ARATH	6.5e-80	36.69	Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana GN=At2g021...	[more]
C3H19_ORYSJ	1.9e-71	34.60	Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica GN...	[more]
C3H32_ORYSJ	2.5e-63	30.42	Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica GN...	[more]
C3H34_ORYSJ	5.6e-31	28.14	Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica GN...	[more]

BLAST of Cp4.1LG01g06590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMA7_CUCSA	0.0e+00	79.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265800 PE=4 SV=1	[more]
A0A0A0KPG3_CUCSA	2.0e-200	87.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264282 PE=4 SV=1	[more]
M5XNI5_PRUPE	6.5e-180	53.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001923mg PE=4 SV=1	[more]
V4U3W6_9ROSI	5.0e-172	51.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004417mg PE=4 SV=1	[more]
A0A061EFX7_THECC	3.4e-168	50.53	CCCH-type zinc finger family protein, putative OS=Theobroma cacao GN=TCM_011094 ...	[more]

BLAST of Cp4.1LG01g06590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02170.1	3.6e-113	52.39	Remorin family protein	[more]
AT2G02160.1	3.6e-81	36.69	CCCH-type zinc finger family protein	[more]
AT1G30320.1	6.3e-41	34.62	Remorin family protein	[more]
AT1G67590.1	4.2e-21	30.30	Remorin family protein	[more]

BLAST of Cp4.1LG01g06590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120513\|ref\|XP_008460229.1\|	0.0e+00	79.67	PREDICTED: zinc finger CCCH domain-containing protein 17 [Cucumis melo]	[more]
gi\|449445373\|ref\|XP_004140447.1\|	0.0e+00	79.00	PREDICTED: zinc finger CCCH domain-containing protein 17 [Cucumis sativus]	[more]
gi\|659120515\|ref\|XP_008460230.1\|	2.2e-221	82.42	PREDICTED: uncharacterized protein LOC103499112 [Cucumis melo]	[more]
gi\|449445288\|ref\|XP_004140405.1\|	4.6e-219	81.64	PREDICTED: uncharacterized protein LOC101221140 [Cucumis sativus]	[more]
gi\|700195617\|gb\|KGN50794.1\|	2.8e-200	87.56	hypothetical protein Csa_5G264282 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C
IPR000571	Znf_CCCH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g06590.1	Cp4.1LG01g06590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 592..613 score: 1.
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 532..555 score: 0.21coord: 588..613 score: 2.0E-5coord: 500..527 score: 0.
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 500..528 score: 10.568coord: 530..556 score: 11.46coord: 587..614 score: 14
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 588..612 score: 3.2
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 425..477 score: 2.
None	No IPR available	unknown	Coil	Coil	coord: 435..455 scor
None	No IPR available	PANTHER	PTHR15725	ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING	coord: 485..1187 score: 2.0E
None	No IPR available	PANTHER	PTHR15725:SF3	SUBFAMILY NOT NAMED	coord: 485..1187 score: 2.0E
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 592..612 score: 0
None	No IPR available	PFAM	PF15663	zf-CCCH_3	coord: 500..554 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g06590	CmaCh04G000040	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g06590	CmoCh04G000060	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g06590	Cla016916	Watermelon (97103) v1	cpewmB468
Cp4.1LG01g06590	Csa5G265800	Cucumber (Chinese Long) v2	cpecuB433
Cp4.1LG01g06590	CsaV3_5G012550	Cucumber (Chinese Long) v3	cpecucB0561
Cp4.1LG01g06590	CsaV3_5G012800	Cucumber (Chinese Long) v3	cpecucB0532
Cp4.1LG01g06590	CsGy5G009460	Cucumber (Gy14) v2	cgybcpeB642
Cp4.1LG01g06590	Carg27077	Silver-seed gourd	carcpeB1036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g06590	Wax gourd	cpewgoB0564
Cp4.1LG01g06590	Wild cucumber (PI 183967)	cpecpiB432
Cp4.1LG01g06590	Watermelon (Charleston Gray)	cpewcgB361