Cp4.1LG01g06510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionADP-ribosylation factor GTPase-activating AGD4-like protein
LocationCp4.1LG01 : 170108 .. 173584 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTATTTTCATATTTCTCTCATATGAAGCTCACAGTACCTTTTCACAAGTTTTGTCATATAAGTTTATTATTTGTAGCTTCTGTTTCTTGAATAGTATGTAGAGAAACTGCTTTTGGTCAAGGATACCGAAGCATCCGGCAACAATTCTTATGCAAAAAGTATCTGGGAAGCTGTCCAAACAAATGACTTGCGAGAAGTCTACCGCCTCATTGCAGTTTCGGCAGTGTCAATTGTCAACAAAACTTATGATCATGCGGTCAGTGTCAGTTCAAGCCCGAATTTGGATGAGGAACCCTCGGGAGGCAATCGAGAATCACATAATCCATCATCGTGCGGGAGAGATATGGATTCTAATGAGTCAAGGAGCAGTCTTCAAGGTTGCTCATTATTGCATCTCGCTTGTCAAAATGACAACCAAGTGATGCTTGAATTGTTATTGCAATTTGGTGCTGATATAAATGTACGCGACTCTCATGGAAGGACGCCTCTACACCAATGCATCTCCCAGAAAAACAACACGCTGGCTAAGTTGCTACTGAGAAGGTACAATCTGTTCTCTTTCTTTTTTTTTTTTTTTTTTTCCTTTCTTTATGTTGGAGCTGTTTATTTTTGTGGTGTTTTGTTGTTGGGTGAGGGTGGCTGTTGCTACTTAGAGAACTACCCTTTTGTTGATTATTAGAAAATATAGGTGTCAAGTATCCCCAATCCAAAAGCCTAAGCTAATAGGTTAAGGTAGAGTCTTATATCAATACTTCCAACTCTCCTTTACACGGTTTGGATATTAGTACAAAATCCAACAACTGGTGATTGGTATTAATTGGGAGAAAATGACATTACAAATGTGTGAACATAGAACCTCCTACTATGATACTACGTTAAATCAGCACTCCACAAAAACTTAATCTAATGGGCTGTGATAATTTAATCTTTTACTTTAACAATGTAGCAATCTTTTACTGGCAAGAAGTAATGGAGTCTAGAGGCGTAAACACTTGATTTGCTCATTCTAACTTTTCTCTGCATTACTCAAGTAAGAGATGTAGTTCGCAATTTCTCATAAACATTGAGGAAGAACTCTTCATCTGGTCCCAAAGTTACATTATAAGCTTTTAATTCCATTCTTTTCATCCTAACGTAAAAATAGATTTACAACATTTTTTTAACAAAAGGCAATTGACATGTAGCTGGAAGGTTTTCTGATGTCAATGGTGGAACTTTATAACGTTTGCTGACGACGGAACAATTTGACACAAATCTTAATGAACAAATCAAATTTTAAAAAATACTGGGGACCAATGTGAAAATTATTTGTTAGAGTGGCTTGATCAAGCTAGAAGTGTATATTATTTTAAATGACATTGATAGTGGTGTTCTTATGCAATCTTATTATCTGTGTCCCTGCTTCTTATAACTTTATGAACAGAGGTGCTCGACAATCAATCAAAGATGGTGGAGGATTAAGTGCGTTAGAAAGAGCAATGGAAATGGGATCAATTACCGATGATGAGCTATTTCTTTTGCTTACAGGATCCGAATAAAGCATATGGACACTTTTGATTTATCATTAATATTAACACCATTGTTTATTGTGTAACTTACTGTATTCCTTTTTCTGTTAATCGAATCTAAAGATTTGTTGAGCTATTTTTCAAAAGACCTAAAGTTTTGTAATTATTGTTAACTTCTGCTATCTCTTCATTGTTGATGATGATAAGAATAATTTATTAATTTCCAGTGAAGATGCTATCTTTGGACAAAAATTCTCAATTTGGTAGGGTTCTTCTTTCTTCTCGATTTTTGGATCCACAATAATTTGTAAGAATAATCTGAGTAAATAGATGATAAACCATCTTCAAGAAGTTTGACAAATTTCCTTGAAAACTGATCCATGATCATTATCAAGAAGAAAAGAGAATCGAACTCTCCACAATCTCTTTCCAACGTTTTAACAACTCTTCTTCTCGTTATGGTTCTTGTTTATGTTTTCAATTCCACTCTTGAAATTGCTGGAATTTTTTCAAGAAGGAGCTGGATTGCCAGATTATTCTCAGTCTTGCCCATCGTTAATTCAAGCATGGCAAAAGGAAACAAAGTTTTAAATGGTTCTTTGAACTTATAACTTCGACACCATGAAATTTTAATTCCTCTTGCAAGAGAACTCTCTATGCCTTTCACATATTTACATATTTACATATTTTGTGTACGGATGCAGTGTTAACTCCCTCGACTGAGATGAATTCGATCACTTGACCCCACCCAGTAATGCACATCTCTTGTAGGCCATAAGCATAACCCAAAGATACGTAATATTTAAGATAGTCATCAATCAAATATTGACAACCATATGCCTATTTATTTTGTTCTAACATATTTATGTGAATATATGTAATATTGGTTGTTCTCCTTTATTTTCTATACTACTATAAATATATATGTATATATATTCTTTTTGTTTACATTTATTTTTCTTAAAATTAGTATACGTTAGTAATAACGGATCGTGATTTGAGTTCTTTGATAAGCAAGATGTCGCGGTAGCATACCAAAAGATAACATTTTATTATATAACTGAGAGAATACACGAGAATCTAGTCTGCATGAGGATACTTATTTAGTTTATAGAAAATCCTCACAAACATAGAGAACCATAGGTAATAAGTACAAACATACACATCAAGTCTAGAAGATATGTAGATTGGGAGCAAAAACACAACTAAGACACAACATACTCAATCATATTATAATATGAATGAGATGAAGCTCGAATAGAGACATATAGAGGTTTATTTATCTTTAAGGTGGGATTCAATGTCCTTGATCAAGTTGTTCAAAAATCCAACGTACTTGTCTGGATTGGGAGAGTTATGGTCAAGTTTCTCATATTTCATGCGCAAAACTACCAAGCTAAGTTTAGGTCCCTTTGGTACAACTTGAAAAATAACCTCAAAGGCCTTGTAATACTTGAACATATCTCCTCCCACTCCAATCATGGATATGAGTAGGTCGTTATCGTCGAATTCCTCTCGTTCTTTGTAAATTTCAGCTTTACCATCTTAGCCAACCACATAGCAAAACAAGAGGAGATGAATGGTTTAGAATATGGTATAAAAGAAGTGAAAAGAAAAGTGAGTGTGTATGTATGTATGTATGTAGGCATACCGACTGTGTAATACTAGAACGTGATGGAATCACGAACTTCAACTTTCTGGATGGACTGAGAAATATTTGGGAGATTGAAAGAATGGTGTCTGAAGATGTTGTAGAATTCAGTTGCAGCTGCCTTTATTTCTACTTCCCTCGAAAGCTCTTCAACAAGAGGCATGGTTTCAGGACTATCCTATGTATAGCTTGATTGCCTTACTCAAACAAACCCACAAACAACTATGCCCCATGCCTTCCCCTATTTATACGCCCACTCCTCAACTCTTCTTTCTTGCTCTTCAGGTATCCTGCACGATTGCTTCCAATTAA

mRNA sequence

ATGTTTTATGTAGAGAAACTGCTTTTGGTCAAGGATACCGAAGCATCCGGCAACAATTCTTATGCAAAAAGTATCTGGGAAGCTGTCCAAACAAATGACTTGCGAGAAGTCTACCGCCTCATTGCAGTTTCGGCAGTGTCAATTGTCAACAAAACTTATGATCATGCGGTCAGTGTCAGTTCAAGCCCGAATTTGGATGAGGAACCCTCGGGAGGCAATCGAGAATCACATAATCCATCATCGTGCGGGAGAGATATGGATTCTAATGAGTCAAGGAGCAGTCTTCAAGGTTGCTCATTATTGCATCTCGCTTGTCAAAATGACAACCAAGTGATGCTTGAATTGTTATTGCAATTTGGTGCTGATATAAATGTACGCGACTCTCATGGAAGGACGCCTCTACACCAATGCATCTCCCAGAAAAACAACACGCTGGCTAAGTTGCTACTGAGAAGCTTTACCATCTTAGCCAACCACATAGCAAAACAAGAGGAGATGAATGGTTTAGAATATGGTATAAAAGAAGTGAAAAGAAAAGTATCCTGCACGATTGCTTCCAATTAA

Coding sequence (CDS)

ATGTTTTATGTAGAGAAACTGCTTTTGGTCAAGGATACCGAAGCATCCGGCAACAATTCTTATGCAAAAAGTATCTGGGAAGCTGTCCAAACAAATGACTTGCGAGAAGTCTACCGCCTCATTGCAGTTTCGGCAGTGTCAATTGTCAACAAAACTTATGATCATGCGGTCAGTGTCAGTTCAAGCCCGAATTTGGATGAGGAACCCTCGGGAGGCAATCGAGAATCACATAATCCATCATCGTGCGGGAGAGATATGGATTCTAATGAGTCAAGGAGCAGTCTTCAAGGTTGCTCATTATTGCATCTCGCTTGTCAAAATGACAACCAAGTGATGCTTGAATTGTTATTGCAATTTGGTGCTGATATAAATGTACGCGACTCTCATGGAAGGACGCCTCTACACCAATGCATCTCCCAGAAAAACAACACGCTGGCTAAGTTGCTACTGAGAAGCTTTACCATCTTAGCCAACCACATAGCAAAACAAGAGGAGATGAATGGTTTAGAATATGGTATAAAAGAAGTGAAAAGAAAAGTATCCTGCACGATTGCTTCCAATTAA

Protein sequence

MFYVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSSPNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGADINVRDSHGRTPLHQCISQKNNTLAKLLLRSFTILANHIAKQEEMNGLEYGIKEVKRKVSCTIASN
Homology
[Close]
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match: AGD4_ARATH (ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana GN=AGD4 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-33
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSA-VSIVNKTYDHAVSVSS 62
           Y+EK L++KD E+  N S A  IWEAVQ+ ++RE+YRLI  +  V+I+N  +D    + +
Sbjct: 590 YLEKALVIKD-ESEANLSAASRIWEAVQSRNIREIYRLIVTTGDVNIINTKFDDITDIDA 649

Query: 63  SPNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGA 122
             ++D       +  H+P+ C R  +SNE RS LQGCSLLH+AC   + V+LELLLQFGA
Sbjct: 650 YHHIDAAEKAVKKR-HDPTVCQRIKESNEPRSCLQGCSLLHVACHIGDSVLLELLLQFGA 709

Query: 123 DINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           D+N+RD HGRTPLH CIS  N+  AK+LLR
Sbjct: 710 DLNIRDYHGRTPLHHCISSGNHKFAKILLR 737

[Close]
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match: AGD2_ARATH (ADP-ribosylation factor GTPase-activating protein AGD2 OS=Arabidopsis thaliana GN=AGD2 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-33
Identity = 72/149 (48.32%), Postives = 105/149 (70.47%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           Y+EK L+VKD E   N++ +  IWEAVQ+ ++R++YRLI  +  +I+N  +D    +   
Sbjct: 591 YLEKALVVKD-EREANSTASSRIWEAVQSRNIRDIYRLIVKADANIINTKFDDITDLDVY 650

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
            +   +     ++ H+P++C R  +SNE+R+ LQGCSLLH+ACQ+ + ++LELLLQFGAD
Sbjct: 651 HHHHVDAPDEVKKRHDPNACQRIKNSNEARNCLQGCSLLHVACQSGDPILLELLLQFGAD 710

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           IN+RD HGRTPLH CI+  NN  AK+LLR
Sbjct: 711 INMRDYHGRTPLHHCIASGNNAFAKVLLR 738

[Close]
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match: AGD3_ARATH (ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.7e-15
Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           Y EKL + +  ++    S A+ +W+AV  ND + VYRLI V+  + VN  YD   S S +
Sbjct: 630 YAEKLFVRRSRDSDFPQSAAQQMWDAVSGNDKKAVYRLI-VNGDADVNYVYDQTSSSSLT 689

Query: 63  -PNLDEEPSGGNRES-----HNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELL 122
              +   P    RE       N         SN S     G SLLH AC+  +  M+ELL
Sbjct: 690 LSRVILVPERPKREDVLLRLRNELLDRTGSSSNISPEGSGGSSLLHCACEKADLGMVELL 749

Query: 123 LQFGADINVRDSHGRTPLHQCISQKNNTLAKLLL 151
           LQ+GA++N  DS G+TPLH C+ +   T+A+LLL
Sbjct: 750 LQYGANVNASDSSGQTPLHCCLLRGKVTIARLLL 782

[Close]
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match: AGD1_ARATH (ADP-ribosylation factor GTPase-activating protein AGD1 OS=Arabidopsis thaliana GN=AGD1 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-14
Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSA--VSIVNKTYDHAVSV- 62
           Y E++ + K  ++    +  + IWE V+ ND + VYR I  S   V+ +     + VS+ 
Sbjct: 630 YSERIFVRKAIDSQHFQAVFQEIWENVRANDKKSVYRHIVCSEADVNALRGQASYTVSLP 689

Query: 63  ----------------SSSPNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHL 122
                           S      E P+G +    +  S  R+  SN+       CSLLHL
Sbjct: 690 LSKMMQMEETLEAKFKSIEEEFQENPAGYSNSRGDGESMVREETSND-------CSLLHL 749

Query: 123 ACQNDNQVMLELLLQFGADINVRDSHGRTPLHQCISQKNNTLAKLLL 151
           AC + +  M+ELLLQ+GA IN  DS GRTPLH CI  +   +A+LLL
Sbjct: 750 ACLSADIGMVELLLQYGAKINATDSKGRTPLHHCIISRRYAIARLLL 789

[Close]
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match: AKT1_ORYSI (Potassium channel AKT1 OS=Oryza sativa subsp. indica GN=AKT1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 1 

Query: 84  RDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGADINVRDSHGRTPLHQCISQKNN 143
           R MD NES +   G + LH+A    N+  + LLL++GAD N RDS G+ PL + + +K+ 
Sbjct: 588 RGMDPNESDND--GHTALHIAASKGNEQCVRLLLEYGADPNARDSEGKVPLWEALCEKHA 647

Query: 144 TLAKLLL 151
            + +LL+
Sbjct: 648 AVVQLLV 652

[Close]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match: A0A0A0KJC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G053060 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-60
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKSIWEAV+TNDLRE YRLIAVSAVSIVN TYD+ VSVSSS
Sbjct: 553 YVEKQFVVKDSEAPGNISYAKSIWEAVKTNDLREAYRLIAVSAVSIVNTTYDNVVSVSSS 612

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEEPSG N+ES NPSSC RD DSNES  SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 613 PHLDEEPSG-NQESLNPSSCTRDWDSNESSDSLQGCSLLHLACQNDNQVMLELLLQFGTD 672

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INV DSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 673 INVCDSHGRTPLHQCISQKNNKLAKLLLR 700

[Close]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match: A0A067KDT3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18591 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.3e-37
Identity = 82/155 (52.90%), Postives = 113/155 (72.90%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEKLL++++   SGN S++  IW+AV+TN+ REVYR IA+S ++IVN T+D    V S 
Sbjct: 598 YVEKLLVIREASVSGNLSHSLGIWQAVKTNNFREVYRYIAISDINIVNTTFDEVFGVESL 657

Query: 63  PNLDE------EPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELL 122
            ++++        +  +R+ ++P++C R  DSN+  + LQGCSLLHLAC   N VMLELL
Sbjct: 658 NHVNDMQNPEFNSNEADRKQYDPAACQRIKDSNDQGNCLQGCSLLHLACHYGNPVMLELL 717

Query: 123 LQFGADINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           LQFGAD+N+RD HGRTPLH CIS++N +LAK LLR
Sbjct: 718 LQFGADVNLRDFHGRTPLHHCISKRNYSLAKFLLR 752

[Close]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match: A0A061E8Q4_THECC (Gcn4-complementing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_011296 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-36
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEKLL+++D    G    + +IW+AV+T++LREVYRLIA+S  +I+N T+D  VS+ S 
Sbjct: 592 YVEKLLIIRDGTLPGVPPNSTNIWQAVKTDNLREVYRLIAMSDTNIINTTFDDVVSIESY 651

Query: 63  PNLDEEPSG-----GNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLL 122
            ++D + S        R+ ++PS+C R  DSN+  + LQGCS+LHLACQ  N VM+ELLL
Sbjct: 652 HHIDAQDSSLDGHKEERKQYDPSACQRIKDSNDPGNCLQGCSVLHLACQCGNPVMVELLL 711

Query: 123 QFGADINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           QFGADIN+RD HGRTPLH CIS  NNT AK LLR
Sbjct: 712 QFGADINMRDFHGRTPLHYCISIGNNTFAKHLLR 745

[Close]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match: A0A061EAG5_THECC (Gcn4-complementing protein, putative isoform 3 OS=Theobroma cacao GN=TCM_011296 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-36
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEKLL+++D    G    + +IW+AV+T++LREVYRLIA+S  +I+N T+D  VS+ S 
Sbjct: 514 YVEKLLIIRDGTLPGVPPNSTNIWQAVKTDNLREVYRLIAMSDTNIINTTFDDVVSIESY 573

Query: 63  PNLDEEPSG-----GNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLL 122
            ++D + S        R+ ++PS+C R  DSN+  + LQGCS+LHLACQ  N VM+ELLL
Sbjct: 574 HHIDAQDSSLDGHKEERKQYDPSACQRIKDSNDPGNCLQGCSVLHLACQCGNPVMVELLL 633

Query: 123 QFGADINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           QFGADIN+RD HGRTPLH CIS  NNT AK LLR
Sbjct: 634 QFGADINMRDFHGRTPLHYCISIGNNTFAKHLLR 667

[Close]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match: A0A061E8U8_THECC (Gcn4-complementing protein, putative isoform 2 OS=Theobroma cacao GN=TCM_011296 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-36
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEKLL+++D    G    + +IW+AV+T++LREVYRLIA+S  +I+N T+D  VS+ S 
Sbjct: 551 YVEKLLIIRDGTLPGVPPNSTNIWQAVKTDNLREVYRLIAMSDTNIINTTFDDVVSIESY 610

Query: 63  PNLDEEPSG-----GNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLL 122
            ++D + S        R+ ++PS+C R  DSN+  + LQGCS+LHLACQ  N VM+ELLL
Sbjct: 611 HHIDAQDSSLDGHKEERKQYDPSACQRIKDSNDPGNCLQGCSVLHLACQCGNPVMVELLL 670

Query: 123 QFGADINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           QFGADIN+RD HGRTPLH CIS  NNT AK LLR
Sbjct: 671 QFGADINMRDFHGRTPLHYCISIGNNTFAKHLLR 704

[Close]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match: AT1G10870.1 (AT1G10870.1 ARF-GAP domain 4)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSA-VSIVNKTYDHAVSVSS 62
           Y+EK L++KD E+  N S A  IWEAVQ+ ++RE+YRLI  +  V+I+N  +D    + +
Sbjct: 590 YLEKALVIKD-ESEANLSAASRIWEAVQSRNIREIYRLIVTTGDVNIINTKFDDITDIDA 649

Query: 63  SPNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGA 122
             ++D       +  H+P+ C R  +SNE RS LQGCSLLH+AC   + V+LELLLQFGA
Sbjct: 650 YHHIDAAEKAVKKR-HDPTVCQRIKESNEPRSCLQGCSLLHVACHIGDSVLLELLLQFGA 709

Query: 123 DINVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           D+N+RD HGRTPLH CIS  N+  AK+LLR
Sbjct: 710 DLNIRDYHGRTPLHHCISSGNHKFAKILLR 737

[Close]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match: AT1G60860.1 (AT1G60860.1 ARF-GAP domain 2)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 72/149 (48.32%), Postives = 105/149 (70.47%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           Y+EK L+VKD E   N++ +  IWEAVQ+ ++R++YRLI  +  +I+N  +D    +   
Sbjct: 591 YLEKALVVKD-EREANSTASSRIWEAVQSRNIRDIYRLIVKADANIINTKFDDITDLDVY 650

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
            +   +     ++ H+P++C R  +SNE+R+ LQGCSLLH+ACQ+ + ++LELLLQFGAD
Sbjct: 651 HHHHVDAPDEVKKRHDPNACQRIKNSNEARNCLQGCSLLHVACQSGDPILLELLLQFGAD 710

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           IN+RD HGRTPLH CI+  NN  AK+LLR
Sbjct: 711 INMRDYHGRTPLHHCIASGNNAFAKVLLR 738

[Close]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match: AT5G13300.1 (AT5G13300.1 ARF GTPase-activating protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.5e-16
Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           Y EKL + +  ++    S A+ +W+AV  ND + VYRLI V+  + VN  YD   S S +
Sbjct: 630 YAEKLFVRRSRDSDFPQSAAQQMWDAVSGNDKKAVYRLI-VNGDADVNYVYDQTSSSSLT 689

Query: 63  -PNLDEEPSGGNRES-----HNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELL 122
              +   P    RE       N         SN S     G SLLH AC+  +  M+ELL
Sbjct: 690 LSRVILVPERPKREDVLLRLRNELLDRTGSSSNISPEGSGGSSLLHCACEKADLGMVELL 749

Query: 123 LQFGADINVRDSHGRTPLHQCISQKNNTLAKLLL 151
           LQ+GA++N  DS G+TPLH C+ +   T+A+LLL
Sbjct: 750 LQYGANVNASDSSGQTPLHCCLLRGKVTIARLLL 782

[Close]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match: AT5G61980.1 (AT5G61980.1 ARF-GAP domain 1)

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSA--VSIVNKTYDHAVSV- 62
           Y E++ + K  ++    +  + IWE V+ ND + VYR I  S   V+ +     + VS+ 
Sbjct: 630 YSERIFVRKAIDSQHFQAVFQEIWENVRANDKKSVYRHIVCSEADVNALRGQASYTVSLP 689

Query: 63  ----------------SSSPNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHL 122
                           S      E P+G +    +  S  R+  SN+       CSLLHL
Sbjct: 690 LSKMMQMEETLEAKFKSIEEEFQENPAGYSNSRGDGESMVREETSND-------CSLLHL 749

Query: 123 ACQNDNQVMLELLLQFGADINVRDSHGRTPLHQCISQKNNTLAKLLL 151
           AC + +  M+ELLLQ+GA IN  DS GRTPLH CI  +   +A+LLL
Sbjct: 750 ACLSADIGMVELLLQYGAKINATDSKGRTPLHHCIISRRYAIARLLL 789

[Close]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match: AT5G66055.1 (AT5G66055.1 ankyrin repeat protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.1e-06
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 1 

Query: 96  QGCSLLHLACQNDNQVMLELLLQFGADINVRDSHGRTPLHQCISQKNNTLAKLLL 151
           +G +L+H A Q  +   ++LLL + ADIN +D  G TPLH  +  + + + KLLL
Sbjct: 325 EGATLMHYAVQTASAPTIKLLLLYNADINAQDRDGWTPLHVAVQARRSDIVKLLL 379

[Close]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match: gi|778698234|ref|XP_011654489.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4 isoform X1 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-60
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKSIWEAV+TNDLRE YRLIAVSAVSIVN TYD+ VSVSSS
Sbjct: 595 YVEKQFVVKDSEAPGNISYAKSIWEAVKTNDLREAYRLIAVSAVSIVNTTYDNVVSVSSS 654

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEEPSG N+ES NPSSC RD DSNES  SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 655 PHLDEEPSG-NQESLNPSSCTRDWDSNESSDSLQGCSLLHLACQNDNQVMLELLLQFGTD 714

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INV DSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 715 INVCDSHGRTPLHQCISQKNNKLAKLLLR 742

[Close]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match: gi|700194486|gb|KGN49663.1| (hypothetical protein Csa_5G053060 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-60
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKSIWEAV+TNDLRE YRLIAVSAVSIVN TYD+ VSVSSS
Sbjct: 553 YVEKQFVVKDSEAPGNISYAKSIWEAVKTNDLREAYRLIAVSAVSIVNTTYDNVVSVSSS 612

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEEPSG N+ES NPSSC RD DSNES  SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 613 PHLDEEPSG-NQESLNPSSCTRDWDSNESSDSLQGCSLLHLACQNDNQVMLELLLQFGTD 672

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INV DSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 673 INVCDSHGRTPLHQCISQKNNKLAKLLLR 700

[Close]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match: gi|778698238|ref|XP_011654490.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4 isoform X2 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-60
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKSIWEAV+TNDLRE YRLIAVSAVSIVN TYD+ VSVSSS
Sbjct: 590 YVEKQFVVKDSEAPGNISYAKSIWEAVKTNDLREAYRLIAVSAVSIVNTTYDNVVSVSSS 649

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEEPSG N+ES NPSSC RD DSNES  SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 650 PHLDEEPSG-NQESLNPSSCTRDWDSNESSDSLQGCSLLHLACQNDNQVMLELLLQFGTD 709

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INV DSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 710 INVCDSHGRTPLHQCISQKNNKLAKLLLR 737

[Close]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match: gi|659109435|ref|XP_008454718.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X2 [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 124/149 (83.22%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKS+WEAV+ NDLRE YRLIAVSAV IVN TYD+ V VSSS
Sbjct: 590 YVEKQFVVKDSEAPGNISYAKSMWEAVKRNDLREAYRLIAVSAVLIVNTTYDNVVGVSSS 649

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEE S  N+ES NPSSCGRD DSNESR+SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 650 PHLDEEHSV-NQESLNPSSCGRDWDSNESRNSLQGCSLLHLACQNDNQVMLELLLQFGTD 709

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INVRDSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 710 INVRDSHGRTPLHQCISQKNNKLAKLLLR 737

[Close]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match: gi|659109433|ref|XP_008454717.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1 [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 124/149 (83.22%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 3   YVEKLLLVKDTEASGNNSYAKSIWEAVQTNDLREVYRLIAVSAVSIVNKTYDHAVSVSSS 62
           YVEK  +VKD+EA GN SYAKS+WEAV+ NDLRE YRLIAVSAV IVN TYD+ V VSSS
Sbjct: 595 YVEKQFVVKDSEAPGNISYAKSMWEAVKRNDLREAYRLIAVSAVLIVNTTYDNVVGVSSS 654

Query: 63  PNLDEEPSGGNRESHNPSSCGRDMDSNESRSSLQGCSLLHLACQNDNQVMLELLLQFGAD 122
           P+LDEE S  N+ES NPSSCGRD DSNESR+SLQGCSLLHLACQNDNQVMLELLLQFG D
Sbjct: 655 PHLDEEHSV-NQESLNPSSCGRDWDSNESRNSLQGCSLLHLACQNDNQVMLELLLQFGTD 714

Query: 123 INVRDSHGRTPLHQCISQKNNTLAKLLLR 152
           INVRDSHGRTPLHQCISQKNN LAKLLLR
Sbjct: 715 INVRDSHGRTPLHQCISQKNNKLAKLLLR 742

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGD4_ARATH2.7e-3350.67ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana G... [more]
AGD2_ARATH2.7e-3348.32ADP-ribosylation factor GTPase-activating protein AGD2 OS=Arabidopsis thaliana G... [more]
AGD3_ARATH9.7e-1538.31ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana G... [more]
AGD1_ARATH6.3e-1434.13ADP-ribosylation factor GTPase-activating protein AGD1 OS=Arabidopsis thaliana G... [more]
AKT1_ORYSI3.7e-0640.30Potassium channel AKT1 OS=Oryza sativa subsp. indica GN=AKT1 PE=2 SV=1[more]
BLAST of Cp4.1LG01g06510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJC8_CUCSA2.4e-6085.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G053060 PE=4 SV=1[more]
A0A067KDT3_JATCU6.3e-3752.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18591 PE=4 SV=1[more]
A0A061E8Q4_THECC7.0e-3655.19Gcn4-complementing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_011296 ... [more]
A0A061EAG5_THECC7.0e-3655.19Gcn4-complementing protein, putative isoform 3 OS=Theobroma cacao GN=TCM_011296 ... [more]
A0A061E8U8_THECC7.0e-3655.19Gcn4-complementing protein, putative isoform 2 OS=Theobroma cacao GN=TCM_011296 ... [more]
BLAST of Cp4.1LG01g06510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10870.11.5e-3450.67 ARF-GAP domain 4[more]
AT1G60860.11.5e-3448.32 ARF-GAP domain 2[more]
AT5G13300.15.5e-1638.31 ARF GTPase-activating protein[more]
AT5G61980.13.6e-1534.13 ARF-GAP domain 1[more]
AT5G66055.15.1e-0640.00 ankyrin repeat protein[more]
BLAST of Cp4.1LG01g06510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698234|ref|XP_011654489.1|3.4e-6085.23PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4 isoform X1 [Cu... [more]
gi|700194486|gb|KGN49663.1|3.4e-6085.23hypothetical protein Csa_5G053060 [Cucumis sativus][more]
gi|778698238|ref|XP_011654490.1|3.4e-6085.23PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4 isoform X2 [Cu... [more]
gi|659109435|ref|XP_008454718.1|1.4e-5883.22PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X... [more]
gi|659109433|ref|XP_008454717.1|1.4e-5883.22PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06510.1Cp4.1LG01g06510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 129..158
score: 3.6coord: 96..125
score: 3.
IPR002110Ankyrin repeatPROFILEPS50088ANK_REPEATcoord: 96..128
score: 13
IPR020683Ankyrin repeat-containing domainGENE3DG3DSA:1.25.40.20coord: 25..51
score: 8.3E-17coord: 94..152
score: 8.3
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 85..152
score: 1.
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 96..151
score: 19
IPR020683Ankyrin repeat-containing domainunknownSSF48403Ankyrin repeatcoord: 93..151
score: 1.82
NoneNo IPR availablePANTHERPTHR23180CENTAURIN/ARFcoord: 3..54
score: 1.9E-45coord: 94..151
score: 1.9
NoneNo IPR availablePANTHERPTHR23180:SF244ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2-RELATEDcoord: 3..54
score: 1.9E-45coord: 94..151
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06510CmaCh04G000320Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06510CmoCh04G000310Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06510CmoCh04G010640Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g06510Csa5G053060Cucumber (Chinese Long) v2cpecuB457
Cp4.1LG01g06510MELO3C018265Melon (DHL92) v3.5.1cpemeB370
Cp4.1LG01g06510ClCG07G006930Watermelon (Charleston Gray)cpewcgB410
Cp4.1LG01g06510Lsi04G011790Bottle gourd (USVL1VR-Ls)cpelsiB362
Cp4.1LG01g06510MELO3C018265.2Melon (DHL92) v3.6.1cpemedB427
Cp4.1LG01g06510Carg21986Silver-seed gourdcarcpeB0258
Cp4.1LG01g06510Carg00101Silver-seed gourdcarcpeB0939
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g06510Cp4.1LG01g07830Cucurbita pepo (Zucchini)cpecpeB374
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06510Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g06510Wild cucumber (PI 183967)cpecpiB456
Cp4.1LG01g06510Cucumber (Chinese Long) v2cpecuB435
Cp4.1LG01g06510Cucumber (Gy14) v2cgybcpeB642
Cp4.1LG01g06510Cucumber (Chinese Long) v3cpecucB0532