Cp4.1LG01g06170 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGGACCACACATACAAACATTATCTAAAACAACATTATTGTTAAAACCCAACCCAAACAAAACATCAACAAAATTTTGTCCACCTTAACTTTTTAAAAAATATGTTGTAAGAAAAAAAAACAATAAATTGGAGGACAGAAGAACTCCACAACCCAGAATTCGAAGGCAAATTTGGTAGGCTTATTTGAAGGAGAAGAAGATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTAAATTCGTTCTCCTTCTCCATCTTTATTAATTACAATCATTCTTATTCTCTCCTCTTTCATCTCATTATTTATGTAATATTTTCTCATTCTTATATTTAATAATTAGAATTTTTATATTTCAACGAGTTGAATTATATTTATGAATTTAATTGACAGGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTGTAAGCTTCATTACATCCATTTGTTAAACTACGTCTGATATTTAGCCGAACAGATTTTATCAAACTATAAATATGAAAATCAAAATGGGTCTAATATAAAACTCTCATAAATAGTTCGATTTTCATTTCTACCGAACCGATCCGTTCGATTCAATTCTCGATTGGGTCGAAAATTAGGGAAACCGAACTGACTATAACCTAGTAATAGTATTACAAGAAGTGGGTCTAATATTAAGTGCTTATATGTTTATGGGTGTGTGTGCAGCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTAATCTCAATCTCTTCAACTTTCAAAAGTGTTTCAAATTTTAAGCTAAAAAATACTCTCATGGTTAGTACACACGTTACTTCCTCGTTTAAAAAATACTGCTGAACCTTCTAAAATAATATTAATATTTTTAAACTTAAAAAAGAATTAAAAGTTTTGAGATAATCTTATTAAAAGGGTATTTTTAAATTTTGAGGATGTTTGAACCATTTCCAAAGGTAATGTTAAGTATACTATTAAAAATTTAAAAATATTGTTGGAACTTTTGAAAGTTTAAAGATATTTTCATTAATTTAGTCTATGTTACGAAAATGATGATATTAAACATTGTGCTCAGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGAAGCTTGAAAGACTTTTAAAAAAAAAAAAGAATGGTTGTTTCCTGTTTGCATTTCGTTGTCTGCGTCTTTTTATTGAGTTCCTCTTTTCTAGTGTGTTGGTTTGTGCATGTCAAGTTTCAATGCAGTATGTAAGTTCAGATGTCAATTGTTTGGATTGAATTTCCAGTTCATTTAAGACCAATAAATAATACCAATGTTCGAGTATGTGATTGAGAAACTCTAGATGTCATCTTCAAACTTTTAAATTTTCTAGTTCAATTTCTTCGGGGCATAACGACGATAGTTACACAATAAGTCACAAATAATCATTAGATTTTTCTCTCTATAAAATCCAAATTATGAACACTCATCGAACTCGAACTAATATATAGCCACATTAACCGACCGATCCCCACCTGTCGACCCTTGGCAATACAAAACTGGTTAAATATGCTACAATAGCATGGAAGCCAAGGGAAGCAGCAGTTTGACGATCCCAAACTGTGATGGAGATCATGCATGAATACAAATACACAAATGCTAGCAAGCAGCATCACAAGAACGCCAAAGTCATTAATAAAACACAAAGGATGGTTGAACTTGTGTAAGGGATGGTACCATGGAGATGCTTTGGAAGGCAGCCACCAGCTGAATCAGAAGAATTTGAGGATGGAGCCAGAGATGTGCTGTTTACTAAAGTGCCATTACTTCCACTACTGCATTGGACAAAAATACGAGGACACAACAGTCAGGAAGAGTAGTCACAGACATAGTTCGGTATATAGATATTTAAGAGTCGTTCGCGGTTACCTTCCTGGAAATATACACGTACCGTGACCTGCAACAAGAAACATCAAACCGAACATTAGCAACCATATCAAATCATTAGCAATCATTCAAGATTTCATACTTGGGTTTGTGGTGGTGATGATAGCCACTCCTTTAAAATCACAGGTCCCTGGAGACTTGGCCATTTTCTGGTAATAAGCATTGAAAGCATAGGTTGAATGGGCTATAACATTATCTGGTTGATAACATGCCTGCCCCTGCAACAGCGGGGAACAATCGACTTTCCCCGGTCCACACGCCCAATCCAGTGCTGCTTGCAGCAGCCTACGATCAGCACCGTCTCGTGCAACACAGAACGTTTGGTTTGTGGTATCATTTGCCAAAACAGCACCAGCACCAGTCAAGTGCAAGGTATAAACTGGCATTCCATTAGAATTGAAGAGACCCCAATTCTTTTCTGAGACTGAACCAGGTCTTAAATCCTCATTGTAGAGCTCATATATGTAGGTACTAACAGGAACACCCGGATGCTTAGGCGTTCCAGTGTTGTTAAGAACATGTCTAATTAAGTTGCTATTGTAAGTGTTAGCATTATCCAAAGTTGCATCTGGCTCCGATGCATCGCCCTTGGATGGCCAGCCTGACTCCGTAACAACGACTCGTATGTTCGTGAAGTTTAAATCAGACATTGCGAAATAGGCAGCATCAACAACCGCATCAAAGACATTAGTATAGTGCAATAGGGTATTGGCGTCAACAGCCTCCTTGGTTGGAGGGAGGGGCCGGAAAAGTGCATAGTCTAGAGGAATCACACCATTTGATTGCATGTAATCATAATAAGGATAAACATTAAGCATGAGATAAGAGCCAGTGGACTGCAAGAATTGAAGTAGAGGAACCATGACAGGGTCCCATGAACGGTTAAAGAAGGCCTGTGATGGAGGGAAGGAGTCAAGAATAATGGAAGAAGAATGCGGGGTAGAAACTTTGATTTGGCGATCCAGATTGGATGCAAGGAGAGCAGAGTGAATGAATTTGAGAGCCGATACAAGGATTGGGGCAGCATTTGGAAGAGTGGTAAGAACATCAGAGCCAATGGCTATGCCTGTGATGTTGGTGGCAGGAACATGGGCAATGACATTCCGAGCAACCCAGTTGGCTGCAGTCGCATTGGATTGGCCAATTCCAAGAAGTTGGTCATTGGGTACAGAAACAATGACTTGAATGCCTGTGTTGGCAAGAGCAAGAAGCATAGCCCGGTCGGCATCATATAACCTGAGATGTCTAATATTTTGAGCTTTGAGAAGTGCAACTACCTGAGTGGGGTTGGGCATATCAGAAAGATCCATACCAAGGTTTACACCAATGAACGCATC TATGGACCACACATACAAACATTATCTAAAACAACATTATTGTTAAAACCCAACCCAAACAAAACATCAACAAAATTTTGTCCACCTTAACTTTTTAAAAAATATGTTGTAAGAAAAAAAAACAATAAATTGGAGGACAGAAGAACTCCACAACCCAGAATTCGAAGGCAAATTTGGTAGGCTTATTTGAAGGAGAAGAAGATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGAAGCTTGAAAGACTTTTAAAAAAAAAAAAGAATGGTTGTTTCCTGTTTGCATTTCGTTGTCTGCGTCTTTTTATTGAGTTCCTCTTTTCTAGTGTGTTGGTTTGTGCATGTCAAGTTTCAATGCAGTATGTAAGTTCAGATGTCAATTGTTTGGATTGAATTTCCAGTTCATTTAAGACCAATAAATAATACCAATGTTCGAGTATGTGATTGAGAAACTCTAGATGTCATCTTCAAACTTTTAAATTTTCTAGTTCAATTTCTTCGGGGCATAACGACGATAGTTACACAATAAGTCACAAATAATCATTAGATTTTTCTCTCTATAAAATCCAAATTATGAACACTCATCGAACTCGAACTAATATATAGCCACATTAACCGACCGATCCCCACCTGTCGACCCTTGGCAATACAAAACTGGTTAAATATGCTACAATAGCATGGAAGCCAAGGGAAGCAGCAGTTTGACGATCCCAAACTGTGATGGAGATCATGCATGAATACAAATACACAAATGCTAGCAAGCAGCATCACAAGAACGCCAAAGTCATTAATAAAACACAAAGGATGGTTGAACTTGTGTAAGGGATGGTACCATGGAGATGCTTTGGAAGGCAGCCACCAGCTGAATCAGAAGAATTTGAGGATGGAGCCAGAGATGTGCTGTTTACTAAAGTGCCATTACTTCCACTACTGCATTGGACAAAAATACGAGGACACAACAGTCAGGAAGAGTAGTCACAGACATAGTTCGGTATATAGATATTTAAGAGTCGTTCGCGGTTACCTTCCTGGAAATATACACGTACCGTGACCTGCAACAAGAAACATCAAACCGAACATTAGCAACCATATCAAATCATTAGCAATCATTCAAGATTTCATACTTGGGTTTGTGGTGGTGATGATAGCCACTCCTTTAAAATCACAGGTCCCTGGAGACTTGGCCATTTTCTGGTAATAAGCATTGAAAGCATAGGTTGAATGGGCTATAACATTATCTGGTTGATAACATGCCTGCCCCTGCAACAGCGGGGAACAATCGACTTTCCCCGGTCCACACGCCCAATCCAGTGCTGCTTGCAGCAGCCTACGATCAGCACCGTCTCGTGCAACACAGAACGTTTGGTTTGTGGTATCATTTGCCAAAACAGCACCAGCACCAGTCAAGTGCAAGGTATAAACTGGCATTCCATTAGAATTGAAGAGACCCCAATTCTTTTCTGAGACTGAACCAGGTCTTAAATCCTCATTGTAGAGCTCATATATGTAGGTACTAACAGGAACACCCGGATGCTTAGGCGTTCCAGTGTTGTTAAGAACATGTCTAATTAAGTTGCTATTGTAAGTGTTAGCATTATCCAAAGTTGCATCTGGCTCCGATGCATCGCCCTTGGATGGCCAGCCTGACTCCGTAACAACGACTCGTATGTTCGTGAAGTTTAAATCAGACATTGCGAAATAGGCAGCATCAACAACCGCATCAAAGACATTAGTATAGTGCAATAGGGTATTGGCGTCAACAGCCTCCTTGGTTGGAGGGAGGGGCCGGAAAAGTGCATAGTCTAGAGGAATCACACCATTTGATTGCATGTAATCATAATAAGGATAAACATTAAGCATGAGATAAGAGCCAGTGGACTGCAAGAATTGAAGTAGAGGAACCATGACAGGGTCCCATGAACGGTTAAAGAAGGCCTGTGATGGAGGGAAGGAGTCAAGAATAATGGAAGAAGAATGCGGGGTAGAAACTTTGATTTGGCGATCCAGATTGGATGCAAGGAGAGCAGAGTGAATGAATTTGAGAGCCGATACAAGGATTGGGGCAGCATTTGGAAGAGTGGTAAGAACATCAGAGCCAATGGCTATGCCTGTGATGTTGGTGGCAGGAACATGGGCAATGACATTCCGAGCAACCCAGTTGGCTGCAGTCGCATTGGATTGGCCAATTCCAAGAAGTTGGTCATTGGGTACAGAAACAATGACTTGAATGCCTGTGTTGGCAAGAGCAAGAAGCATAGCCCGGTCGGCATCATATAACCTGAGATGTCTAATATTTTGAGCTTTGAGAAGTGCAACTACCTGAGTGGGGTTGGGCATATCAGAAAGATCCATACCAAGGTTTACACCAATGAACGCATC ATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGA MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQKQNQGLEIPPVVEGQMKR
BLAST of Cp4.1LG01g06170 vs. Swiss-Prot
Match: CNR2_MAIZE (Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.0e-43 Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. Swiss-Prot
Match: PCR2_ARATH (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.1e-40 Identity = 69/138 (50.00%), Postives = 98/138 (71.01%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. Swiss-Prot
Match: CNR9_MAIZE (Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.1e-40 Identity = 77/153 (50.33%), Postives = 99/153 (64.71%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. Swiss-Prot
Match: CNR7_MAIZE (Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-39 Identity = 75/153 (49.02%), Postives = 99/153 (64.71%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. Swiss-Prot
Match: CNR10_MAIZE (Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.7e-38 Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TrEMBL
Match: A0A0A0KIS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027940 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61 Identity = 105/141 (74.47%), Postives = 118/141 (83.69%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TrEMBL
Match: A0A0B0P935_GOSAR (Plant cadmium resistance 2-like protein OS=Gossypium arboreum GN=F383_06323 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48 Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TrEMBL
Match: A0A0D2NFY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G174700 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.2e-48 Identity = 88/158 (55.70%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TrEMBL
Match: A0A022QN19_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a024272mg PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-47 Identity = 81/134 (60.45%), Postives = 104/134 (77.61%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TrEMBL
Match: A0A068TZM9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032920001 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.4e-47 Identity = 80/134 (59.70%), Postives = 101/134 (75.37%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TAIR10
Match: AT1G14870.1 (AT1G14870.1 PLANT CADMIUM RESISTANCE 2) HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41 Identity = 69/138 (50.00%), Postives = 98/138 (71.01%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TAIR10
Match: AT5G35525.1 (AT5G35525.1 PLAC8 family protein) HSP 1 Score: 158.7 bits (400), Expect = 2.8e-39 Identity = 69/138 (50.00%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TAIR10
Match: AT1G68610.1 (AT1G68610.1 PLANT CADMIUM RESISTANCE 11) HSP 1 Score: 156.0 bits (393), Expect = 1.8e-38 Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TAIR10
Match: AT1G14880.1 (AT1G14880.1 PLANT CADMIUM RESISTANCE 1) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-37 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein) HSP 1 Score: 133.7 bits (335), Expect = 9.6e-32 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: gi|659102930|ref|XP_008452392.1| (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 255.4 bits (651), Expect = 6.2e-65 Identity = 110/147 (74.83%), Postives = 125/147 (85.03%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: gi|659129456|ref|XP_008464696.1| (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62 Identity = 107/145 (73.79%), Postives = 120/145 (82.76%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: gi|449449034|ref|XP_004142270.1| (PREDICTED: cell number regulator 2-like [Cucumis sativus]) HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61 Identity = 105/141 (74.47%), Postives = 118/141 (83.69%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: gi|720029913|ref|XP_010265360.1| (PREDICTED: cell number regulator 2-like [Nelumbo nucifera]) HSP 1 Score: 211.8 bits (538), Expect = 7.9e-52 Identity = 87/134 (64.93%), Postives = 107/134 (79.85%), Query Frame = 1
BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: gi|747049114|ref|XP_011070591.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Sesamum indicum]) HSP 1 Score: 204.1 bits (518), Expect = 1.6e-49 Identity = 83/143 (58.04%), Postives = 110/143 (76.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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