Cp4.1LG01g03890 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCACGTATTTCGCGTATAACCAAATACTGTATTTCGAGTATTTCGCGCTCGACACGTCGTTGATAAGCCCTCTCTCCCTGCCCTTGACCAACCCCTTCGTCGATCGGATCCCTCGATAGAACAGGAATTCCTCCAAATTCCTCCAAATTCCGCTCTCTCTTACCTCATTCCACATGGATTTTCATAACCAATCCTAATCCTGATTTGTTCCTTAATGCACGATTCTCCCTAGGGTTCGCTTCCCTTTTCTGTAATTTCAATCCCAAATTTCGCTTCGAATTTGGTCCCGACCTGATTCCACAAGATACCAATCCCATGTCTTCTTTACGATCAACAATATGGGTATTGGTTCTTTGCGCTTTAGCGTTACGTTTCTGTACGAATTTGGGTCGGGCTATGAACCTCCCCTTCACGGCCAACGATGTGCTTCCGGTTCTTCCTCGACAAATATCGTGGCCGGTGCTTAATAATTTCCATTCTGCCGTGGATTTGTTGCCGTCCTATGTTGGGTCTGTGACTCCCAGTAATGGAACAATTGAGTGGAAGGGAGCGTGCTTCTCCACTAACGAAGCTCGGATTGATTTTACGGAAGGCGATAGAGGCTTGGGAGGCGGTCTTCTCCGTCTTAAGGTTTGATCCTTTTGTTCTTTATGGATTGCCATGTTGTTTTTAAAGAATTTCTCGGAGTTTCGGTTGACCTTCAAATTGTTGAATGCAATTTTCTTACATTGGCCTTGGCACGGAGATCCTTAATTTTAACCAACTTCGATTAGTTTGTATACCAAATACTGTTATGGTTTTGATGCTTCGGCCACGTTTTTAGTTGAATTATTAATCGAATTCTATATTCACGAGTAGAAGATTGAGTGCGTTTGTTGTTTATATTAGTGGTTTGTAGAGAGTATTCTCAAGCAAGTTTTTGGGTGGTCATCTACCATAGAATTTAGACTATTTAACGATATGTATAAGCGTGCGAACCTACATTATGACATATATTTCTTTGTTTATTCCTTTCCCCCCCCCCATTTTATAGACATCTGCAGCACACAGCTGGACCTGTATGGATCTATATGTTTTTGCAACACCCTACAGGATTACGTGGGATTACTATTTCTCTGCACGGGAGCATACATTGAATTTTGGGTCATGGGAAGAACCTGCTGAGTTGGAATATGTATGTTTTTGTGTTCTTGTTTCGTTATCAAATGCTCTAATTTGTAGTTGCCTTGCATATTGCTAACCATGACATATGACACTTGAGCAGGTAAAGCAACATGGGATTTCTGTTTTTCTTATGCCGTCCGGGATGATGGGAACAATGCTCTCTTTGGTAGATGTGTTGCCTCTGTTTTCCAATTCCATATGGGGCGAAAATGCCAATTTAGCTTTTCTTAAAAAACATATGGGTGCTACATTTGAAAAGCGATCCCAACCTTGGCAAGCAACTATTAATCCAGATGATGTTCATTCTGGTGATTTTTTAGCAGTGTCAAAAATTCGTGGACGGTGGGGAGGCTTTGAGACATTAGAAAAGTGGGTAACAGGTGCTTTTGCTGGTCATACAGCAGTTTGCTTAAAGGATGAACAGGGTAATCTTTGGGTTGGTGAATCAGGACATGAGAATGAGAAGGTATGCAAGCTTCGTTTGGCCGTTTATTTCAACAAATGCATATGACTATGAAAAAACAAGTTAGTGGATTAGAAATGAAGCTTGAGCTTTTAATTTAAGCGGAGAATTTTCTCATGTGTCTAATAGGGTGAAGAAATTATTGTGGTGATTCCGTGGGATGAGTGGTGGGAGTTGGCACTCAAGGACAACTCTAATCCACAAATAGCCTTGCTTCCGCTGCATCCAGAGATACGTGCAAAATTCAACACTACTGCAGCATGGGAATACGCGCGAAGAATGTCTGGGAAGCCATATGGTTATCATAACATGATTTTTAGCTGGATTGATACCGTAACCGATAACTTTCCTCCACCTCTTGATGCTCACTTGGTAGGTTTTGGTTTTCTTTTCCCGCTGTCATGTTTCTGTTGTAGCAAATGTGCTCATTCATGTTTCAGTGGACTGGGATGAGGATATTATAGTAATGCATTTGTTGGTTATGTGTGTGTATGCATAAATATGTACATACATATCTAAGGACGATGCATGTATGAAGGACCTCTCGTGTAATTTTTCTTGCTGACAAGTTCTCATTTGCAGGTTATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCATATGCTGCGAACATGTGGAATGAGGCTCTGAACAAGCGGCTAGGAACTGAGGTATGTCAGCAATCTTGACACATTAACTGTAGACAAATAAACGATCGAGAAAATTTTCAGCACATCAAATTTAAAGGTAGAAAACTTTCTAGGATTGAATGCCAACCTTTTTACCCCACAAAATTTCACTATTGAAGTGAAAACTAAACATCTTTTATTACTACTATTCAAACCTTTGATACGGTAGTTAATAGTTGATTGCTCTTCCATTGGCTATTAAGAATGAGGAAAAAGGGATCTCATAGAATTTAATTCTTGTTCACAACCCACAATCAATATGAGGCACTTAAGACCACGGTGGGTTGGTGTAAAGGTCAATAAGAGTCGATCTAAATACTATAAGGGTAAAGGATTTTGAGGGAACGAGTTCTGGGAGGCTTAGGCAAATGTATCAGGAGAACTGTTTGTAATTAGAGTGGCTCTATTCCCTTATTTTATGGATAGCTTGAAAGTGGCTCTATTTTGCAATATTCGAATGTTAATTATTTACTCTTAGTATGTGTTTGACATGCCTTTAAAGGGTTTTAAATTAAAGCACTTATGTATTAAGTATTTTTTTTTTCTTAAGAACAACAAATGTGGGATCGGGATTTGAACCTTTAAACTTATGCCTTAACCATTGAGATATACTACAAAAAAAATTTAAAAGTGCTTTTGATCTGTTTTTCTAGTTTTTGTACCATTTTTTACAATTGAAAGTTTTGAAACGCATTTAATTGTTAAAAAACACATTAAAAAAATCTGATAGACAATGCTAATGTTTTAGAGAAACATTATTAATCATTTATAAACACATAATAAGTCGCGTCAAACACTCACATAGATGAACTGAAGGATGGGGAAAGAATCTTCACAGGTTTGTAGGTGGAAATCTTCATTTGAGATGGGCTTGGGGTTTTGGGACATTAACTAGTTTCTCCTTTTTTTTTCCTTTCTTTTTTTAAGTAAAACAAACGTGGGGGTGATAGATTGACCTTCATCTCAAGCAAGTAGCAAGGTAATAGATATCTTTATTTATAGAGTTATGCTCTGACATGAAAATAAAATTTCTTAGTGGTTTAGACATTTAGTTTTTGGGACGAGGGATTCATTGCACATCCTATCTCTATCCTCAATCAAGCATAAATTATCTATAAAATTTACTATTTAAACTACCATGGAATAAATTATCCTGAATGCTACTCTGTTCAACTGCTTGAATACCCTTCATCACATTGTGGGTACCAGCTCGAAATATTTTAAAAATAGATCGGTGCATGATGGACCTTATTGAAGCTTGAGAACTTCTTTGATTAATGGTTGATGGACAAATGTTTTTCTAGAAATGCCTTAAGCACGAACACAATATTGTTCTCTAGGGTTCTCTTTGGAAATCCATATGCATGGTGATACGAAGCACAAAGGATCATGAAAATTTGACTGAAATCTGTTTTAGCTTCACATTTCTATCTGATTATTCTAGTTCTTCATTTATCATCCGAACTTTTACAAAATAATCCTCCAAATTTACCTGTTTTTCTTTTCATATTTCAGAACTGTACAGAGCATTTGTTGTCCTCTAAAGTTCTGTATGAAAGCATCTCATTCGTATATGATAACTTAGATTATGAAACTTCTTGTTTTCCTTTTAGGATTTGGACTTGCATGACATTCTAGTCGAGACTGAAAAGCGAGGAATTCCTTTTGACGTACTGCTTACAATTCCGGAACAAGATGAATGGGTCTACAGTGATGGGACATCTACAACATGTGTTGCCTTTATCCTTGCAATGTACAAGGAGGCTGGAGTATTTGGTCCTATATCCAGCTCCATTCAAGTAACAGAGTTCACTGTATGACTCAAAATTCTTGAACATGTTTCATAGTTAATGATCTTGCCTCTTCTTCCATAGCATTTTTTATCATTGAATTTGGCTGTTCTGCAGATTCGGGATGCATATATGCTAAGGATTTTTGAGGACAACCAAACAAACCTGCCAAGTTGGTGCAACAATGAAAGTGATAATCTTCCCTTTTGCCAGATTCTTGGTGAGTACAAAATGGAACTTCCTGAGTACAATACCTTGAAACCTTACGCCAATATGAATGAAAATTGCCCCTCCCTGCCTCCTACATACGATCGTCCCATTCGATGTTAAGCCTGGCTTTGGCCTACATGTTGGCGAAGGCTGTCGATTCAATTCTTTACGACGATTGTATAAACCATGGCAACTAAGTCTGAGATTGTACGTGGACGAAAAGTGTTTCAAACCTTCTTTTATCTGCAGCAGCTAGTTTCCCACTGGAGATTCTCTGTATTTGTACATAATTTTAGAAGACATGTTGTGGTATTTAAAAGACTGGGTGCTGATTCATTTCTGGTTCACACAATCTCAGAATGTTATGCCCATTCATCCAGTGAAATTTGATCGTTGCTCTTTCAAATTTGTGAATGTTCCCATCATTTGTCTTGAATGTTGCTGTATTTGGCACAGCAGCCACTTGAAACTTGCCTTGATTTTTACTTCCTTTTTCCAAGGTTCAAAACATCTTGGTTTCGTATCCAAATC GCCCACGTATTTCGCGTATAACCAAATACTGTATTTCGAGTATTTCGCGCTCGACACGTCGTTGATAAGCCCTCTCTCCCTGCCCTTGACCAACCCCTTCGTCGATCGGATCCCTCGATAGAACAGGAATTCCTCCAAATTCCTCCAAATTCCGCTCTCTCTTACCTCATTCCACATGGATTTTCATAACCAATCCTAATCCTGATTTGTTCCTTAATGCACGATTCTCCCTAGGGTTCGCTTCCCTTTTCTGTAATTTCAATCCCAAATTTCGCTTCGAATTTGGTCCCGACCTGATTCCACAAGATACCAATCCCATGTCTTCTTTACGATCAACAATATGGGTATTGGTTCTTTGCGCTTTAGCGTTACGTTTCTGTACGAATTTGGGTCGGGCTATGAACCTCCCCTTCACGGCCAACGATGTGCTTCCGGTTCTTCCTCGACAAATATCGTGGCCGGTGCTTAATAATTTCCATTCTGCCGTGGATTTGTTGCCGTCCTATGTTGGGTCTGTGACTCCCAGTAATGGAACAATTGAGTGGAAGGGAGCGTGCTTCTCCACTAACGAAGCTCGGATTGATTTTACGGAAGGCGATAGAGGCTTGGGAGGCGGTCTTCTCCGTCTTAAGACATCTGCAGCACACAGCTGGACCTGTATGGATCTATATGTTTTTGCAACACCCTACAGGATTACGTGGGATTACTATTTCTCTGCACGGGAGCATACATTGAATTTTGGGTCATGGGAAGAACCTGCTGAGTTGGAATATGTAAAGCAACATGGGATTTCTGTTTTTCTTATGCCGTCCGGGATGATGGGAACAATGCTCTCTTTGGTAGATGTGTTGCCTCTGTTTTCCAATTCCATATGGGGCGAAAATGCCAATTTAGCTTTTCTTAAAAAACATATGGGTGCTACATTTGAAAAGCGATCCCAACCTTGGCAAGCAACTATTAATCCAGATGATGTTCATTCTGGTGATTTTTTAGCAGTGTCAAAAATTCGTGGACGGTGGGGAGGCTTTGAGACATTAGAAAAGTGGGTAACAGGTGCTTTTGCTGGTCATACAGCAGTTTGCTTAAAGGATGAACAGGGTAATCTTTGGGTTGGTGAATCAGGACATGAGAATGAGAAGGGTGAAGAAATTATTGTGGTGATTCCGTGGGATGAGTGGTGGGAGTTGGCACTCAAGGACAACTCTAATCCACAAATAGCCTTGCTTCCGCTGCATCCAGAGATACGTGCAAAATTCAACACTACTGCAGCATGGGAATACGCGCGAAGAATGTCTGGGAAGCCATATGGTTATCATAACATGATTTTTAGCTGGATTGATACCGTAACCGATAACTTTCCTCCACCTCTTGATGCTCACTTGGTTATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCATATGCTGCGAACATGTGGAATGAGGCTCTGAACAAGCGGCTAGGAACTGAGGATTTGGACTTGCATGACATTCTAGTCGAGACTGAAAAGCGAGGAATTCCTTTTGACGTACTGCTTACAATTCCGGAACAAGATGAATGGGTCTACAGTGATGGGACATCTACAACATGTGTTGCCTTTATCCTTGCAATGTACAAGGAGGCTGGAGTATTTGGTCCTATATCCAGCTCCATTCAAGTAACAGAGTTCACTATTCGGGATGCATATATGCTAAGGATTTTTGAGGACAACCAAACAAACCTGCCAAGTTGGTGCAACAATGAAAGTGATAATCTTCCCTTTTGCCAGATTCTTGGTGAGTACAAAATGGAACTTCCTGAGTACAATACCTTGAAACCTTACGCCAATATGAATGAAAATTGCCCCTCCCTGCCTCCTACATACGATCGTCCCATTCGATGTTAAGCCTGGCTTTGGCCTACATGTTGGCGAAGGCTGTCGATTCAATTCTTTACGACGATTGTATAAACCATGGCAACTAAGTCTGAGATTGTACGTGGACGAAAAGTGTTTCAAACCTTCTTTTATCTGCAGCAGCTAGTTTCCCACTGGAGATTCTCTGTATTTGTACATAATTTTAGAAGACATGTTGTGGTATTTAAAAGACTGGGTGCTGATTCATTTCTGGTTCACACAATCTCAGAATGTTATGCCCATTCATCCAGTGAAATTTGATCGTTGCTCTTTCAAATTTGTGAATGTTCCCATCATTTGTCTTGAATGTTGCTGTATTTGGCACAGCAGCCACTTGAAACTTGCCTTGATTTTTACTTCCTTTTTCCAAGGTTCAAAACATCTTGGTTTCGTATCCAAATC ATGTCTTCTTTACGATCAACAATATGGGTATTGGTTCTTTGCGCTTTAGCGTTACGTTTCTGTACGAATTTGGGTCGGGCTATGAACCTCCCCTTCACGGCCAACGATGTGCTTCCGGTTCTTCCTCGACAAATATCGTGGCCGGTGCTTAATAATTTCCATTCTGCCGTGGATTTGTTGCCGTCCTATGTTGGGTCTGTGACTCCCAGTAATGGAACAATTGAGTGGAAGGGAGCGTGCTTCTCCACTAACGAAGCTCGGATTGATTTTACGGAAGGCGATAGAGGCTTGGGAGGCGGTCTTCTCCGTCTTAAGACATCTGCAGCACACAGCTGGACCTGTATGGATCTATATGTTTTTGCAACACCCTACAGGATTACGTGGGATTACTATTTCTCTGCACGGGAGCATACATTGAATTTTGGGTCATGGGAAGAACCTGCTGAGTTGGAATATGTAAAGCAACATGGGATTTCTGTTTTTCTTATGCCGTCCGGGATGATGGGAACAATGCTCTCTTTGGTAGATGTGTTGCCTCTGTTTTCCAATTCCATATGGGGCGAAAATGCCAATTTAGCTTTTCTTAAAAAACATATGGGTGCTACATTTGAAAAGCGATCCCAACCTTGGCAAGCAACTATTAATCCAGATGATGTTCATTCTGGTGATTTTTTAGCAGTGTCAAAAATTCGTGGACGGTGGGGAGGCTTTGAGACATTAGAAAAGTGGGTAACAGGTGCTTTTGCTGGTCATACAGCAGTTTGCTTAAAGGATGAACAGGGTAATCTTTGGGTTGGTGAATCAGGACATGAGAATGAGAAGGGTGAAGAAATTATTGTGGTGATTCCGTGGGATGAGTGGTGGGAGTTGGCACTCAAGGACAACTCTAATCCACAAATAGCCTTGCTTCCGCTGCATCCAGAGATACGTGCAAAATTCAACACTACTGCAGCATGGGAATACGCGCGAAGAATGTCTGGGAAGCCATATGGTTATCATAACATGATTTTTAGCTGGATTGATACCGTAACCGATAACTTTCCTCCACCTCTTGATGCTCACTTGGTTATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCATATGCTGCGAACATGTGGAATGAGGCTCTGAACAAGCGGCTAGGAACTGAGGATTTGGACTTGCATGACATTCTAGTCGAGACTGAAAAGCGAGGAATTCCTTTTGACGTACTGCTTACAATTCCGGAACAAGATGAATGGGTCTACAGTGATGGGACATCTACAACATGTGTTGCCTTTATCCTTGCAATGTACAAGGAGGCTGGAGTATTTGGTCCTATATCCAGCTCCATTCAAGTAACAGAGTTCACTATTCGGGATGCATATATGCTAAGGATTTTTGAGGACAACCAAACAAACCTGCCAAGTTGGTGCAACAATGAAAGTGATAATCTTCCCTTTTGCCAGATTCTTGGTGAGTACAAAATGGAACTTCCTGAGTACAATACCTTGAAACCTTACGCCAATATGAATGAAAATTGCCCCTCCCTGCCTCCTACATACGATCGTCCCATTCGATGTTAA MSSLRSTIWVLVLCALALRFCTNLGRAMNLPFTANDVLPVLPRQISWPVLNNFHSAVDLLPSYVGSVTPSNGTIEWKGACFSTNEARIDFTEGDRGLGGGLLRLKTSAAHSWTCMDLYVFATPYRITWDYYFSAREHTLNFGSWEEPAELEYVKQHGISVFLMPSGMMGTMLSLVDVLPLFSNSIWGENANLAFLKKHMGATFEKRSQPWQATINPDDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEQGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDNSNPQIALLPLHPEIRAKFNTTAAWEYARRMSGKPYGYHNMIFSWIDTVTDNFPPPLDAHLVISVMSMWTRLQPAYAANMWNEALNKRLGTEDLDLHDILVETEKRGIPFDVLLTIPEQDEWVYSDGTSTTCVAFILAMYKEAGVFGPISSSIQVTEFTIRDAYMLRIFEDNQTNLPSWCNNESDNLPFCQILGEYKMELPEYNTLKPYANMNENCPSLPPTYDRPIRC
BLAST of Cp4.1LG01g03890 vs. TrEMBL
Match: A0A0A0KTT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603390 PE=4 SV=1) HSP 1 Score: 1031.2 bits (2665), Expect = 4.4e-298 Identity = 477/522 (91.38%), Postives = 502/522 (96.17%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TrEMBL
Match: V4TPI6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031248mg PE=4 SV=1) HSP 1 Score: 952.6 bits (2461), Expect = 2.0e-274 Identity = 440/516 (85.27%), Postives = 476/516 (92.25%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TrEMBL
Match: A0A0B0MN49_GOSAR (Protein FAM69A OS=Gossypium arboreum GN=F383_03126 PE=4 SV=1) HSP 1 Score: 935.6 bits (2417), Expect = 2.5e-269 Identity = 431/516 (83.53%), Postives = 467/516 (90.50%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TrEMBL
Match: M5XCX8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004148mg PE=4 SV=1) HSP 1 Score: 934.9 bits (2415), Expect = 4.3e-269 Identity = 430/526 (81.75%), Postives = 470/526 (89.35%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TrEMBL
Match: A0A0D2SDE6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G345200 PE=4 SV=1) HSP 1 Score: 931.8 bits (2407), Expect = 3.7e-268 Identity = 428/516 (82.95%), Postives = 466/516 (90.31%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TAIR10
Match: AT1G70160.1 (AT1G70160.1 unknown protein) HSP 1 Score: 909.1 bits (2348), Expect = 1.3e-264 Identity = 414/514 (80.54%), Postives = 461/514 (89.69%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TAIR10
Match: AT4G27020.1 (AT4G27020.1 unknown protein) HSP 1 Score: 750.4 bits (1936), Expect = 7.7e-217 Identity = 335/525 (63.81%), Postives = 413/525 (78.67%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. TAIR10
Match: AT5G54870.1 (AT5G54870.1 unknown protein) HSP 1 Score: 739.2 bits (1907), Expect = 1.8e-213 Identity = 325/526 (61.79%), Postives = 418/526 (79.47%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. NCBI nr
Match: gi|659090896|ref|XP_008446261.1| (PREDICTED: uncharacterized protein LOC103489044 [Cucumis melo]) HSP 1 Score: 1032.3 bits (2668), Expect = 2.9e-298 Identity = 478/522 (91.57%), Postives = 502/522 (96.17%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. NCBI nr
Match: gi|449434877|ref|XP_004135222.1| (PREDICTED: uncharacterized protein LOC101209749 [Cucumis sativus]) HSP 1 Score: 1031.2 bits (2665), Expect = 6.4e-298 Identity = 477/522 (91.38%), Postives = 502/522 (96.17%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. NCBI nr
Match: gi|567891961|ref|XP_006438501.1| (hypothetical protein CICLE_v10031248mg [Citrus clementina]) HSP 1 Score: 952.6 bits (2461), Expect = 2.9e-274 Identity = 440/516 (85.27%), Postives = 476/516 (92.25%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. NCBI nr
Match: gi|1021518242|ref|XP_016202623.1| (PREDICTED: uncharacterized protein LOC107643478 [Arachis ipaensis]) HSP 1 Score: 940.3 bits (2429), Expect = 1.5e-270 Identity = 431/505 (85.35%), Postives = 466/505 (92.28%), Query Frame = 1
BLAST of Cp4.1LG01g03890 vs. NCBI nr
Match: gi|1012169205|ref|XP_015965303.1| (PREDICTED: uncharacterized protein LOC107489030 [Arachis duranensis]) HSP 1 Score: 940.3 bits (2429), Expect = 1.5e-270 Identity = 431/505 (85.35%), Postives = 466/505 (92.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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