Cp4.1LG01g03510 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGCGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACTCTGAGGTCGTTCGGGTTCAGTATGATCCCAAAGAGTGCAGTTACGAGTCTCTGCTTGATGCGTTTTGGGCTCGACATGATCCTACTACTCTTAATCGGCAGGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCAATTCTTGTGATATGTTATGGTTCTTGACTGAGTTCTTTGTGTTTCTTTTGAAATTTCTATTGGTTAACCTTTGTTTGGGTAGTTCCTCTTGGGATTATTGGAGTTCCTTGGTTATTTTGTCAAGATTTTATAGAATTGGAGTTTGGATGCTCACTAATTTCACATTTGAGTTCATTTTCTCTGATGCGGATTGCTTGTTGATTTGAAATGGTAAAGCCTCATGTTTTGTATGGGTCAGGAGAAAGGAAAAGCATATATTTGCTTCTGAAAAATATAATAGTAACGAAGTGGACAAATATGAACTGCGTTAGAAGTCTATGGAGGGATGTTAAGTTTTTGTTAATGCTTTGTTATTCAAAGCACGATGCTTTCATGACCATACTGATAATTGCAGATTTTTACTTGTGTTGAGGAAGACTGTTTGTTTTGATGTTTCGCTACAGATGTATGACTCCTGTATTTTTGTTGTGTTTCCTGGTAAACAATGTGAAGGAACGCAAAGGATGACTGTTTTTAATAGCATAAAAACATGAAATATATGTTTAAGATGTTGAGTTTATCAAACGTAGGCTGGGTTGTGCAGGGCTAGATGAGTTTATCAAACGTAGGCTGGGTTGTGCAGGGCTAGACATGACTTCACCTCACTTTGGATATTGTAATTTATGTCTCTGTTACCATATTTTTTTTTTCGTGCATTGTGCTTCTTTAGTTGGAATAGAACATTTTTTATTGAAAAAGAAAAAGTGAAATTGGCAAAGGAGACACCTCTTAATTTCAGAAGAGGGCATGCTGTTTGTGTATTATCTTTCTTATCCATGTCTGTGTTGGTTTTAGGTTTAAGGGTAGTGCATTGATTCAGGTGATTTGAGGGTTGAGAATTTAGCTGAAAAGAATGTTGCCTTTTTGACTGAGTGGCTGTATATTTTTCCTTGGAACTTTGTGAGGGTTGAGAAATTCGTTGCTTTTTTTACTGAATTGCTATAGCATTTCTCCTTGGAACTTGATGCTTCTTGATATAGGATCGATTTAAGTATGGACATCATTCCAATGGTTAGAGCTCCAATGTGTTTTAAATGGCACTTTCCTGAATCTTAAGAAAGCTGTTCTCATTGTTTGCCTTGTTTTATCAGATTCATTAAATTATCAGTTGGTATGTGGCCTATGCATTTCTTGGACCATTGGATGGACTGACATGGTTTCTTTTGTTCTTTTTTGTTTGTCGGCTGTTCTTTAGGGCTAGGGGTCAAATGTAAAATTCTTAAGAAAGCTGAGTTTTTCTTAAGGCATGTCATGCGCTCAGCTTACCCTAGCCCCGTTCCTTTTGCTCAGTTTTTCTCGATCGAGATTTTTGTCTCCTTGGTTGGACAGCTCGAAAAATCCAACCACTTCACCTTCTACTTGACTTTTGTGTCAACCCAACCCGAATGGAGGATTAACATCATATACCTTATCCAGAGGTTTCCCAATTTTAGTTCTTGGTCATTGACTCGTAGTGANAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCATTTAAGTCTTTGGGTCACATTCTTTGGAGGAACCTCCTCTTTGAAGATTTGGCTTACAGTCTAAAGCTTTTAGGGTGCTGTTAGTTCGAGAGAACGGTTCTCTTATAATAGGAAAAGTCCTTTTGCATCCTCCTATTCTTGACAGGGGACGATTTCTTTGGTAGGTTCGCTTGTAAGCTTCATTTATAGAGGATTGGGTTAGAAAGAAATAGGAGTGTTCAAGCTTTGAATCAGTGATTTCAGGGGATATGGATCCCACTCGACCAGCATTTCAAATGACTCGAAAATCATCCTCCGACCAATTTGGGGAAAGAAGTATTATTTTTCAAGTACTACAGACATCTAAACATATTGTTCTTGTTTCTTACTTGTGTCATTTTCTAGCATGAGCTACTTATCTTATTTCTTGTACTGAAAGATGCATCATACACGAAATTTAGCATTGAGATAACTCTTCCATTATTATGCATATGATATGAGTCTTCTATTCATTCCCTGATCTAAATCCAAGTAATAGTATTCATATTGTTTGGGTTGACAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAG ATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGCGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACTCTGAGGTCGTTCGGGTTCAGTTTAAGGGTAGTGCATTGATTCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAG ATGAATCTCTGGAACAAGCTCGGATTCGGGTCCAGAGCCACCGAGGCCTCGCCGGAGTCGTTGGCGATTGCACAAGGTCCAGACGATGACATTCCGGCGCCGGGCCAGCAGTTTGCCCAATTTGGGGCGGGCTGCTTTTGGGGCGTCGAATTGGCGTTTCAACGAGTGCCCGGTTTGACCAAAACGGAGGTCGGTTACACTCAAGGGCATATTCATAATCCGACTTATGAGGATGTTTGTTCGGGGCAGAGCAATCACTCTGAGGTCGTTCGGGTTCAGTTTAAGGGTAGTGCATTGATTCAGGGAAATGATGTGGGAACACAATACAGATCTGGCATATACTTCTACACTCCTGAACAACAGAAAGCGGCTCTCGAATCAATGGAACGCCACCAGAAGTTATTGAACAGGAAGATCATGACTGAGATTCTTCCTGCCAAGAAATTCTACCGAGCGGAGGAATACCATCAGCAATACCTTGAGAAAGGTGGGAGGTTTGGCTCCAAGCAATCTGCTGCTAAAGGCTGCAATGACCCAATTCGATGCTACGGTTAG MNLWNKLGFGSRATEASPESLAIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGLTKTEVGYTQGHIHNPTYEDVCSGQSNHSEVVRVQFKGSALIQGNDVGTQYRSGIYFYTPEQQKAALESMERHQKLLNRKIMTEILPAKKFYRAEEYHQQYLEKGGRFGSKQSAAKGCNDPIRCYG
BLAST of Cp4.1LG01g03510 vs. Swiss-Prot
Match: MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 6.1e-78 Identity = 142/204 (69.61%), Postives = 160/204 (78.43%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. Swiss-Prot
Match: MSRA_BRANA (Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 3.8e-72 Identity = 132/202 (65.35%), Postives = 151/202 (74.75%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. Swiss-Prot
Match: MSRA4_ORYSJ (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRA4 PE=2 SV=2) HSP 1 Score: 271.9 bits (694), Expect = 5.0e-72 Identity = 135/205 (65.85%), Postives = 157/205 (76.59%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. Swiss-Prot
Match: MSRA3_ARATH (Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana GN=MSRA3 PE=1 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 6.5e-72 Identity = 135/203 (66.50%), Postives = 152/203 (74.88%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. Swiss-Prot
Match: MSRA4_ARATH (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana GN=MSR4 PE=1 SV=2) HSP 1 Score: 270.8 bits (691), Expect = 1.1e-71 Identity = 131/203 (64.53%), Postives = 158/203 (77.83%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TrEMBL
Match: A0A0A0KU66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025100 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.0e-83 Identity = 157/203 (77.34%), Postives = 166/203 (81.77%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TrEMBL
Match: W9SC39_9ROSA (Peptide methionine sulfoxide reductase A4 OS=Morus notabilis GN=L484_017078 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.1e-81 Identity = 152/203 (74.88%), Postives = 165/203 (81.28%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TrEMBL
Match: A0A067JEZ7_JATCU (Methionine sulfoxide reductase OS=Jatropha curcas GN=JCGZ_26312 PE=2 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 5.9e-80 Identity = 150/203 (73.89%), Postives = 165/203 (81.28%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TrEMBL
Match: V4U687_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005637mg PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 2.9e-79 Identity = 149/205 (72.68%), Postives = 165/205 (80.49%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TrEMBL
Match: A0A067ETU0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024432mg PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.6e-79 Identity = 148/205 (72.20%), Postives = 165/205 (80.49%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TAIR10
Match: AT5G07470.1 (AT5G07470.1 peptidemethionine sulfoxide reductase 3) HSP 1 Score: 271.6 bits (693), Expect = 3.7e-73 Identity = 135/203 (66.50%), Postives = 152/203 (74.88%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TAIR10
Match: AT4G25130.1 (AT4G25130.1 peptide met sulfoxide reductase 4) HSP 1 Score: 270.8 bits (691), Expect = 6.3e-73 Identity = 131/203 (64.53%), Postives = 158/203 (77.83%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TAIR10
Match: AT5G61640.1 (AT5G61640.1 peptidemethionine sulfoxide reductase 1) HSP 1 Score: 261.5 bits (667), Expect = 3.8e-70 Identity = 130/204 (63.73%), Postives = 151/204 (74.02%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. TAIR10
Match: AT5G07460.1 (AT5G07460.1 peptidemethionine sulfoxide reductase 2) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61 Identity = 113/181 (62.43%), Postives = 131/181 (72.38%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. NCBI nr
Match: gi|778690317|ref|XP_004146896.2| (PREDICTED: peptide methionine sulfoxide reductase A1-like [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 2.8e-83 Identity = 157/203 (77.34%), Postives = 166/203 (81.77%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. NCBI nr
Match: gi|659107767|ref|XP_008453847.1| (PREDICTED: peptide methionine sulfoxide reductase A3-like [Cucumis melo]) HSP 1 Score: 315.8 bits (808), Expect = 4.8e-83 Identity = 157/203 (77.34%), Postives = 166/203 (81.77%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. NCBI nr
Match: gi|703147688|ref|XP_010109139.1| (Peptide methionine sulfoxide reductase A4 [Morus notabilis]) HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81 Identity = 152/203 (74.88%), Postives = 165/203 (81.28%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. NCBI nr
Match: gi|1009121805|ref|XP_015877660.1| (PREDICTED: peptide methionine sulfoxide reductase A1 [Ziziphus jujuba]) HSP 1 Score: 306.6 bits (784), Expect = 2.9e-80 Identity = 153/203 (75.37%), Postives = 164/203 (80.79%), Query Frame = 1
BLAST of Cp4.1LG01g03510 vs. NCBI nr
Match: gi|808154214|ref|NP_001294898.1| (peptide methionine sulfoxide reductase A1-like [Jatropha curcas]) HSP 1 Score: 305.1 bits (780), Expect = 8.5e-80 Identity = 150/203 (73.89%), Postives = 165/203 (81.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|