Cp4.1LG01g02040 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAGAAAAGGTTTGATCTCAACGAATAGGAAAGGCTCAGTCAATTCATCACTCTCCGCCAAACCCATGAATCAAAAACCAGGCTGTTTGTCCGTTTCATTCTCAATTCCATTGGATCTTCCATTTGTTGATGGAGAAGCTTTTCCTTAGCCCTTTTTTGCTGTTGTTTTACACAAATCAAGTGGGGTTTCTCCCTTTATTCTCATCTTCCCCTTTACCCTTCTACTCATTCACCTTTGCTTGTCTTCAACGTTGGGTTGCCCCGTGAAAAACCAATCTATTTGAGAATTTTAGGGTGTTTGTAACAAAACCCAGAAGGGGATTTGGGGGATTTGGGGGATTTGTTACAGATGCTCTGCGAATGGGGAAAGTGGAGGAGCGAAATCTGCCGGTGCAGCAGCGTCGTGAGGTGGCTCACTCTTCTGGGTGTCTTTGTGGTGAATGTTCGATTTGTTTTGATAGAGTTTGTAAGGAGTTGAATTTCAAGTGTTTGTTGGTTTTGGTTTTGGGGTTTGTGGTGTTTGTGCCTGGATTCTTTTGGCTTCTTCCTTTTCATGAAAGAAATTCAGGGTTTGAAGCGAAAGACGCCATTAAACTCAGTGGTATGTATGTATGTATGTATGTCTTTCGATTCCCATTTCTCTTATTCTGTTTTGGGATTGAATGATTTGTGTAGCAATTTCTTGATGGCGTCTTATACTTCTCTGATGATTTTGGATGATCTTGCTGTTTTCTAATGATGTTTTGACAACAGGATTGTGCTTTAGTTCAACTCATCTACCATTTTTAGCTTAGATTTGCTAGGATCAAGCTTGTGTTCTTCCCTATGTTGACTTTGAAACTCCGAACCTCTTTCTAGTGGACTCGTTTGAAACTTTGAGGGAAAACCCAAAAGGGAAAGCTCAAAGAGGACAATATCGGTTAGGATTTGACTGTTACAAATGGGATCAGAGCCAAACACTGGGTCCCTAAGGGGAGTGGATTATGAAATCCCACATCGGTTGAAGAGGGGAACGAATCATTTCTTATAAGGATGTGGAAATCTCTCTCTAATAGATGCATTTTAAAACCTTAAGGGAAAGTCCGGAAGGAAAAACCTTTAAAGGACAACATTTGCTAGTAATGAGTTTGGACTGTTACAAATAGTATCAGAGCCAAATACTGGGCGGTGTGTCATCGAGGACGTTGGGCCCCAAAAGGGAGTGGATTGTGAGATCCCACATCGGTGGTAGAGGAGAACGAATCATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTGGACGCGTTTTAAAACCTTTAAGGGGAAGCCTGGAAGGGAAAATTCAAAGAGGACAATATCTACTAGCGATGGGTTTGAGCTGTTACAAATAGTATCAGAGCCAAACACCGGGCGGTGTGCCATCGAGGACGTTGGGCCCCAAAAGGGAGTGGATTGTGAGATTCCACATCGGTTGTAGAGGGAAACGAATCATTCCTTATAAGAGTGTGGAAATTTCTCCCTAGTAGATACGTTTTAAAACTTAGGCTATCCTTTTGGTTCAAGTTAGATTTTGTATGAATATGGTACTCATAAACTTTTGTTTCTCCTTTTTCCAGCCACAGTTCACGTGTATTTTGTTCTTGAGAAGCCTGTGAAGGAGCTTCTCCCTCATATCAAGAGATTAGAGTTTGATATCAATGGTGAACTAGACATTCCTAATGTCAAGGTTTTGTGCTGCTCTTTTCTGTTGGATTTAGCTTTCTTAAGTATGATCCCTTATGACTAAGGGTCGTCGTATATCGTACCAGGTTGCCATTCTATCCATGCACGACGTAGGCGAGTCGAACAGGACATACGTGGTTTTCGGTCTTCTTTCTGAATACTTAACTGCTCCAATAAATCCAGTGTCCTTAAGTCTGCTGAGATCGTATTTATATGACCTTTACCTTCGCGAGTCGAACCTTACTTTGACGACATCGATTTTTGGACAGCCATCAGTATTCGAAATCCTGAGGTTTCCTGGGGGAATCTCTATAATCCCATTTCAACATGCTTCAATATGGCAGTTCCCCCAGATTGTGTTTAACTTCACTCTTACGAACTCTATTTCTGAAATACTCGACAAATTCGTCGAGTTCAGGAACGAGGTGAAGCTTGGATTGCATCTGAGGCGCTACGAGGTATTAAAACCTGTTCGAGTTTATCGAACGTTAGCTATATACATTGAGTTGTGATGTTAGTTCCATGTATGGAGTTGAGTAATGGATGCTGGATTTCACTCTTTCTTGTCTTACAGAATGTGTATTTTCAAATAACAAACACAATTGGCTCGACGATGCAACCGCTCGTAGTTGTTCAAGCTTCTATTTCTTCGGAGTTGGGGCGCATGACATCACAGAGATTAAAGCAGTTGGCTGCAATCATCAACGCCTCTCCCAAACGAAATCTCGGCCTTGATTACTCGGTCTTCGGAGAAGTCGAAAGTGTCAGTTTGTCTTCGTATCTGAGGAGAACCTCTAAGGCAATACCACCTACTCTTCCTCCAGCTCCTGCCCCAGCTCCTGGTGATCATGTAGAACTACAGATTGCTCCACATCGTTCAAGGTCATCGTCCCATGGTCTTGCGCCCCGACGACATGTAAATCGTTACCCACCTCGTTCTTCTCCGGCTCCTGCACATTCCTCTCGTGGACATTCAATACCTCCAATCTCCTATCCGAAGTCTACAAGTCTAATTGTTCCTCCGGCCGATCAACCTGGGGTTTCTTCGTCGTTGCCCCCTGATCTGTTACCTAAACCGAAGCCTTCTTTTCGGTCCGAATCAGGGCAGACAAAGGAAGATGTCCATAGAGTTTGGCCGCCGCCCATTGATTCGTCTCGTCCAGATCAAGTAAGTTTTGACATACTTTGTTAGATCATAAAGCTGAAGGCATGTACAGTTGCCTTTGTATCTATCAGAGCTCCAACTCATTCATTTCTCATGTTTGTAGGACTGAATATCTCAGGGCTCCATCACTCTCCTTCATCTTGGCATATCCATATCATCACACAGTCATCTGAAGAACACCAATGATACAAAAGACGTCGGGTTGGAGCGGATCGGGTACTCATTTTTGGTTCTACGAGCAACAGAAGGCGCCTCTGCAAACATTTCTAACAACAAACAGGTGTTTTCCTCCCAAAAAGGAGAGTGTTAAGTGTAGATAGGGAATGGGGATGTTGTTTTCCAAAGGGGAAGCAAGTCCAGTAGGTGTAGGGTGTTCTAAAACATATAATTATGAGATGGGATTTTGCAGATCTCAAGAGGAACCGAA ACAGAAAAGGTTTGATCTCAACGAATAGGAAAGGCTCAGTCAATTCATCACTCTCCGCCAAACCCATGAATCAAAAACCAGGCTGTTTGTCCGTTTCATTCTCAATTCCATTGGATCTTCCATTTGTTGATGGAGAAGCTTTTCCTTAGCCCTTTTTTGCTGTTGTTTTACACAAATCAAGTGGGGTTTCTCCCTTTATTCTCATCTTCCCCTTTACCCTTCTACTCATTCACCTTTGCTTGTCTTCAACGTTGGGTTGCCCCGTGAAAAACCAATCTATTTGAGAATTTTAGGGTGTTTGTAACAAAACCCAGAAGGGGATTTGGGGGATTTGGGGGATTTGTTACAGATGCTCTGCGAATGGGGAAAGTGGAGGAGCGAAATCTGCCGGTGCAGCAGCGTCGTGAGGTGGCTCACTCTTCTGGGTGTCTTTGTGGTGAATGTTCGATTTGTTTTGATAGAGTTTGTAAGGAGTTGAATTTCAAGTGTTTGTTGGTTTTGGTTTTGGGGTTTGTGGTGTTTGTGCCTGGATTCTTTTGGCTTCTTCCTTTTCATGAAAGAAATTCAGGGTTTGAAGCGAAAGACGCCATTAAACTCAGTGCCACAGTTCACGTGTATTTTGTTCTTGAGAAGCCTGTGAAGGAGCTTCTCCCTCATATCAAGAGATTAGAGTTTGATATCAATGGTGAACTAGACATTCCTAATGTCAAGGTTGCCATTCTATCCATGCACGACGTAGGCGAGTCGAACAGGACATACGTGGTTTTCGGTCTTCTTTCTGAATACTTAACTGCTCCAATAAATCCAGTGTCCTTAAGTCTGCTGAGATCGTATTTATATGACCTTTACCTTCGCGAGTCGAACCTTACTTTGACGACATCGATTTTTGGACAGCCATCAGTATTCGAAATCCTGAGGTTTCCTGGGGGAATCTCTATAATCCCATTTCAACATGCTTCAATATGGCAGTTCCCCCAGATTGTGTTTAACTTCACTCTTACGAACTCTATTTCTGAAATACTCGACAAATTCGTCGAGTTCAGGAACGAGGTGAAGCTTGGATTGCATCTGAGGCGCTACGAGAATGTGTATTTTCAAATAACAAACACAATTGGCTCGACGATGCAACCGCTCGTAGTTGTTCAAGCTTCTATTTCTTCGGAGTTGGGGCGCATGACATCACAGAGATTAAAGCAGTTGGCTGCAATCATCAACGCCTCTCCCAAACGAAATCTCGGCCTTGATTACTCGGTCTTCGGAGAAGTCGAAAGTGTCAGTTTGTCTTCGTATCTGAGGAGAACCTCTAAGGCAATACCACCTACTCTTCCTCCAGCTCCTGCCCCAGCTCCTGGTGATCATGTAGAACTACAGATTGCTCCACATCGTTCAAGGTCATCGTCCCATGGTCTTGCGCCCCGACGACATGTAAATCGTTACCCACCTCGTTCTTCTCCGGCTCCTGCACATTCCTCTCGTGGACATTCAATACCTCCAATCTCCTATCCGAAGTCTACAAGTCTAATTGTTCCTCCGGCCGATCAACCTGGGGTTTCTTCGTCGTTGCCCCCTGATCTGTTACCTAAACCGAAGCCTTCTTTTCGGTCCGAATCAGGGCAGACAAAGGAAGATGTCCATAGAGTTTGGCCGCCGCCCATTGATTCGTCTCGTCCAGATCAAGGCTCCATCACTCTCCTTCATCTTGGCATATCCATATCATCACACAGTCATCTGAAGAACACCAATGATACAAAAGACGTCGGGTTGGAGCGGATCGGGTACTCATTTTTGGTTCTACGAGCAACAGAAGGCGCCTCTGCAAACATTTCTAACAACAAACAGATCTCAAGAGGAACCGAA ATGGGGAAAGTGGAGGAGCGAAATCTGCCGGTGCAGCAGCGTCGTGAGGTGGCTCACTCTTCTGGGTGTCTTTGTGGTGAATGTTCGATTTGTTTTGATAGAGTTTGTAAGGAGTTGAATTTCAAGTGTTTGTTGGTTTTGGTTTTGGGGTTTGTGGTGTTTGTGCCTGGATTCTTTTGGCTTCTTCCTTTTCATGAAAGAAATTCAGGGTTTGAAGCGAAAGACGCCATTAAACTCAGTGCCACAGTTCACGTGTATTTTGTTCTTGAGAAGCCTGTGAAGGAGCTTCTCCCTCATATCAAGAGATTAGAGTTTGATATCAATGGTGAACTAGACATTCCTAATGTCAAGGTTGCCATTCTATCCATGCACGACGTAGGCGAGTCGAACAGGACATACGTGGTTTTCGGTCTTCTTTCTGAATACTTAACTGCTCCAATAAATCCAGTGTCCTTAAGTCTGCTGAGATCGTATTTATATGACCTTTACCTTCGCGAGTCGAACCTTACTTTGACGACATCGATTTTTGGACAGCCATCAGTATTCGAAATCCTGAGGTTTCCTGGGGGAATCTCTATAATCCCATTTCAACATGCTTCAATATGGCAGTTCCCCCAGATTGTGTTTAACTTCACTCTTACGAACTCTATTTCTGAAATACTCGACAAATTCGTCGAGTTCAGGAACGAGGTGAAGCTTGGATTGCATCTGAGGCGCTACGAGAATGTGTATTTTCAAATAACAAACACAATTGGCTCGACGATGCAACCGCTCGTAGTTGTTCAAGCTTCTATTTCTTCGGAGTTGGGGCGCATGACATCACAGAGATTAAAGCAGTTGGCTGCAATCATCAACGCCTCTCCCAAACGAAATCTCGGCCTTGATTACTCGGTCTTCGGAGAAGTCGAAAGTGTCAGTTTGTCTTCGTATCTGAGGAGAACCTCTAAGGCAATACCACCTACTCTTCCTCCAGCTCCTGCCCCAGCTCCTGGTGATCATGTAGAACTACAGATTGCTCCACATCGTTCAAGGTCATCGTCCCATGGTCTTGCGCCCCGACGACATGTAAATCGTTACCCACCTCGTTCTTCTCCGGCTCCTGCACATTCCTCTCGTGGACATTCAATACCTCCAATCTCCTATCCGAAGTCTACAAGTCTAATTGTTCCTCCGGCCGATCAACCTGGGGTTTCTTCGTCGTTGCCCCCTGATCTGTTACCTAAACCGAAGCCTTCTTTTCGGTCCGAATCAGGGCAGACAAAGGAAGATGTCCATAGAGTTTGGCCGCCGCCCATTGATTCGTCTCGTCCAGATCAAGGCTCCATCACTCTCCTTCATCTTGGCATATCCATATCATCACACAGTCATCTGAAGAACACCAATGATACAAAAGACGTCGGGTTGGAGCGGATCGGGTACTCATTTTTGGTTCTACGAGCAACAGAAGGCGCCTCTGCAAACATTTCTAACAACAAACAGATCTCAAGAGGAACCGAA MGKVEERNLPVQQRREVAHSSGCLCGECSICFDRVCKELNFKCLLVLVLGFVVFVPGFFWLLPFHERNSGFEAKDAIKLSATVHVYFVLEKPVKELLPHIKRLEFDINGELDIPNVKVAILSMHDVGESNRTYVVFGLLSEYLTAPINPVSLSLLRSYLYDLYLRESNLTLTTSIFGQPSVFEILRFPGGISIIPFQHASIWQFPQIVFNFTLTNSISEILDKFVEFRNEVKLGLHLRRYENVYFQITNTIGSTMQPLVVVQASISSELGRMTSQRLKQLAAIINASPKRNLGLDYSVFGEVESVSLSSYLRRTSKAIPPTLPPAPAPAPGDHVELQIAPHRSRSSSHGLAPRRHVNRYPPRSSPAPAHSSRGHSIPPISYPKSTSLIVPPADQPGVSSSLPPDLLPKPKPSFRSESGQTKEDVHRVWPPPIDSSRPDQGSITLLHLGISISSHSHLKNTNDTKDVGLERIGYSFLVLRATEGASANISNNKQISRGTE
BLAST of Cp4.1LG01g02040 vs. TrEMBL
Match: A0A0A0L6J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214050 PE=4 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 4.0e-179 Identity = 335/439 (76.31%), Postives = 368/439 (83.83%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TrEMBL
Match: F6H959_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01420 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 3.9e-102 Identity = 225/456 (49.34%), Postives = 289/456 (63.38%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TrEMBL
Match: A5BYB5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008788 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 8.2e-100 Identity = 235/518 (45.37%), Postives = 302/518 (58.30%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TrEMBL
Match: A0A061DX06_THECC (Hydroxyproline-rich glycoprotein family protein, putative OS=Theobroma cacao GN=TCM_006395 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.2e-98 Identity = 223/450 (49.56%), Postives = 286/450 (63.56%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TrEMBL
Match: A0A067KRP0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05038 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 9.4e-96 Identity = 217/453 (47.90%), Postives = 279/453 (61.59%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TAIR10
Match: AT3G56590.2 (AT3G56590.2 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 200.3 bits (508), Expect = 2.8e-51 Identity = 159/458 (34.72%), Postives = 229/458 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TAIR10
Match: AT1G10790.1 (AT1G10790.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2)) HSP 1 Score: 187.6 bits (475), Expect = 1.9e-47 Identity = 120/328 (36.59%), Postives = 180/328 (54.88%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. TAIR10
Match: AT3G10810.1 (AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein) HSP 1 Score: 172.2 bits (435), Expect = 8.2e-43 Identity = 134/402 (33.33%), Postives = 197/402 (49.00%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. NCBI nr
Match: gi|659112144|ref|XP_008456084.1| (PREDICTED: uncharacterized protein LOC103496125 [Cucumis melo]) HSP 1 Score: 639.0 bits (1647), Expect = 6.7e-180 Identity = 334/440 (75.91%), Postives = 370/440 (84.09%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. NCBI nr
Match: gi|778680189|ref|XP_011651267.1| (PREDICTED: uncharacterized protein LOC101222031 isoform X1 [Cucumis sativus]) HSP 1 Score: 636.0 bits (1639), Expect = 5.7e-179 Identity = 335/439 (76.31%), Postives = 368/439 (83.83%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. NCBI nr
Match: gi|778680192|ref|XP_004149972.2| (PREDICTED: uncharacterized protein LOC101222031 isoform X2 [Cucumis sativus]) HSP 1 Score: 636.0 bits (1639), Expect = 5.7e-179 Identity = 335/439 (76.31%), Postives = 368/439 (83.83%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. NCBI nr
Match: gi|645224119|ref|XP_008218956.1| (PREDICTED: synaptojanin-1 [Prunus mume]) HSP 1 Score: 397.1 bits (1019), Expect = 4.5e-107 Identity = 224/445 (50.34%), Postives = 293/445 (65.84%), Query Frame = 1
BLAST of Cp4.1LG01g02040 vs. NCBI nr
Match: gi|658008307|ref|XP_008339344.1| (PREDICTED: uncharacterized protein LOC103402377 [Malus domestica]) HSP 1 Score: 387.1 bits (993), Expect = 4.6e-104 Identity = 232/464 (50.00%), Postives = 290/464 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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