Cp4.1LG01g00260 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g00260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transducin/WD40 repeat-like superfamily protein
Location	Cp4.1LG01 : 3617204 .. 3625864 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTGCTCCCGCACAATCGAAGGGGTTTTGTTGGAGCAGACGAGGGCGCGAAATAGAGAATTGAGATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACCGGTTCGGCGGACGGAACCGTCGTCATCTTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAACTTCAAGGTTTTTTAGTTTCACTGCTTTCTTTTATTTCAGTTGGACTTCATTATCCTAGGTCGAATCCGTGGTTTCTTAGAGCTAATCTTACTTCTAAATGATTGTTAGTTTACATTTACAAAATGGACAAACGTCCTAAGATTTTGGAGATGTATCAGTCATGTTATTTTAATTTCGTGCTTCGATTAGACTTCATGGAGAATTTCTATGAACTTTGAATTCACTTGTCAAGAGAGAGAAAAGTAAAGAGTGGAGGGGTCAAGTGCAATGCGAGTGAGTTTTTGGGGCGAAGGAGTGAAATTGGGTTATTGACGGCAAGAGGAGAAAATTGATGATATGCGACTCATTTTCATCATTGCATGCTATGCTGAAATTGAGTCACATTACAATTTCAACAAGACAATAACTAATTCAAAGCTAGTAGAGGCATAAGCGAGGGAAATATTCAAAGCCAACCAGGAAGTTTGTTCTCATCCTTCATTGGATGGCTTATGTTTCATGTTTTTTCTCGAAGAAGGCAAGGGCTTTAAGCTCTTAAAATTTTTGAAGCTGGAAAGGGCAATGTTCCCTTAGAAGATCATATCTGGCATAGAAATTAAATAGACAGAAATTATTGAATCACCGAAAGATTCATTAACGTTAAGCGTCTGCTAACACTTTCAAGGCTAGTAGGTGCATTTTGAGTTCTTATTTGGGTCTCTCTCTTTGAGACCTTGGCTTGTTAAACGTTGTTCCAGAAAAGCTTTTAATGAGTGAAGTTTGCTCGAGCCTAAACCAGGTGAAACCATCTTTGTAGGTTCATGAGGCTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTATTGCATGCATTTGTTCAGATGGAAGTTCGTCATTGTGGGAGGAGGTTGTTGAAGGTAATCTTTTGGTTTTTGTTGACCCCGGGTTCTCTCTCAAATTTTATTGTTACGTTAGCTACGTCTATTTCTTACATCTTATCTTCCCCTTTACTTGGCCCAAGAGCATGGTACATAAACTATAAACCCTCATTTGACTAGAATTTGAAGCGTCCTAATCATTGTATAAATCTATTGCCTGTTGCTGCTTTCTAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGGTAAATGACAATATTTCTTCTGATTCTCTTGCGACATATATATCCTTGTGCTGTTACTGGTGGATGATTCCTGTGTTTTTTGCTACTTCTCAATTGCCTTTGATTTTTAACGCATTCAATTAGTTCATTTTTATTACTCTGGAACTTAACATATCACTATTTCCCCCTCAATAATGAAGTACTATAAGGATTTATTTGGATATAAATGTGATAGTTGGGTCAAGAATAACTTTGGATGTCTAAAATACTTTCTCATTGTTTCATTTTTGTTGCATTTTGTTATTCATGAAAAAGTATTTCCTATTAAAAAAAAACCCATTACACTCTTTTTTATGCCTTTTGTTTTTTTGTAGATTGCGGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGTGATCAATCTTTTAATCTTTTTTCATGTTCTCTAATTTTATTAGACTTCAGAAGTTATCATTTGAATGGCTTATTCCATTATGATCTTGCAATCTGAGGAAAGATGTACTGTAATTCGTTTGAACATTGGTTGAACTTCAATCAATTGGATTTCCTCTTTTATAATAAAGGAAACTGACCTTTAGATTTCCTTTATTTCAAAATTATCCATCTTTTTAACCTATTGATGTTTCACATCTATATTCCAATGTTCTAATGTAACTATATAATTGGACATGGATATTTGTGTACTGCTCCTGTGAATTGCACGTTATTCTTTGTGTTACAGTTCTACCGCTATGTCATAGCTTTCTTATGTCAACAGTCTATTGAACCATTCTTTTGGGGATGCTTGAATTTTGACACCACATCCTTTCTCTTTCGTTGTTGGAGGATTGTTTTCAAAGAATATGGAGATCTGGAATATATTGAAAAAACAACAATCTTCTTGCTCCAGTCACTTCATCTTCCTCCCCTTGTCACTCTTTATAAAGGATAAAAGTAAAAAATAAAAAATAAAAAAGTGGTGTGTGCGGGCACACAAACTCTTCTGAAAGGAAATATTTGGTTTGGGTCCTTTACCTTCACTATGGCTTGTTATTGACATATGAAGAGTCTCAAGGGAAGCACATCGTGAACGGCTGGCTAGTTTTATGATGTTATCCAGAAACCCGATGAGCAACATCTGCTGAATTTTAGGAATTTAAAAGCATCTTTATTTCTTTCATTTTGGGTTAAATGAGGATCATGATGATTTATCACCATAGATCCTCGGATCAGCCTATTCATTTTTATTTGACAATGTTTTCTTCATTGCTCTTTCTTGGTGTAAATTGAATCCTCTATTTCTTTTGTATAGTCTTTTTATTTTATTTTATATATATACATCAATGATATCCCCCCCACCAAAAAAAAGAAACCAAGTTAGTAATGACCTTTTAATAATTTGACTCCTAATTTTCTACTTTTGTGCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCAAGTATATCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCAAGTTTTGTTTTGGCTTTTCATTCGGATACACCACAGCTTGATTCTGCCAAGGTAATCTAAGTTCTTCTGATGCCATTACTGCACTCAAAATTGTGATATGACCTGCTGCTCACAGCATATTGGTCAGTCCACGATGATTGCATACTAGAGTTAATATGTTATTTGTCCTCCATAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGTAATGGACTAATTCCTAAAGGAGCTTCATATAATTGGTGTATCTGTGGTGTATAATTTTGAAACACATAGGTTCAGCAGATATATCCTTGTTTATCATGTAGTCCTTCAATTTCTTTACAGTTGTCACAAACTTCCCAGGGCAATTCCTGGTAACTGTTTGAAAGAATCACCACAATGAGCTTGATATGACCAAATTCATTCACGTGTCTACTTGGAATTCTTAAAAAACAGTGAATAAGCTTCAGCAATAATGATATTAATTGTTCTTGAATATAATTTAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTTGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTATCTCTTCAAAATTTCTCTCTGTTTTCTCATTCCCCTTTCTTTTCATTTATATTTCTTGAAAATCCAAGATGGATGCATTTGAAACGTCCATTTGTTAAGAGAAACCCCTAGTGTAGATAGGAGTCCATTTGAATCCATGACGATGGAACCTTATAAAATAAATATGAAGATGATCGCTCATAATTGACTACAAATGTTGCTACAATTTAGTTGATATGGTTCCATGAACTGCGTGTTTTAGATTTTGTTCTCTTTCGATTATTCTTAGATAGGAGGGAAGAGGTGGTGTTGCTAATTGATGGTCATGTTTTCACTTGCACTGTCAGGTGTGGGACATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACGTTTTGTTTCTCTATGATGTAACCGCTTCCTGTATTCGTTGTTAGGAAGAATTTTCAAATAACTTATCTGTCTTGCTGAGTGGGGTGCTTAGATTAGTGATGTCTTACTGGAGACCTATCTTTTATTTTAACAAATTTCTCTTGCTGAGTTGTGACTTCGGTTGCTTAAGAGGTATATAGTCAACACGTACACAGGAAGAATAACTGACTAGAGATATTTGAGAATTGAGTTTTAAGATGAGATGCTTATGAATTTGAAGGAAAATAATTAGTATAACTAAGGATAATATAGTATTTCCGTCCTCGAAAAGAACAGTTCTTAAGAACTTTAAAATGAGTTTTGGAAATTTAACTGTAAAAGGATTTGCAATAGCAGACGGTCCAAAGAAGCTTCCACTTCCAAATTCATCCAGCGTCGAGGATTGTGGAACAAGAATGGTTCATTGTCTTTGCAGAATTGAGCTCATATTGGGCCTAAATCTGGGGCCAAATTAGTGAAATGAGCTTTAGATCCGAGGGGATAGCAGCCGCCAACTCAAGAAGATGCCACTTTTTCTGCCGTGTTTCCCCAAGAACCTCTATGAAAAGATTCTGATTGCCTGAACTCTTGAGCACCGATTGATCGATGGGCAGGGCACATTTTCCAAGGCTCTTGCTTCTATTTTACTTGACACCAGCTTCTTCTACATTATTGCCAGATTAAAGTATGCTTCACATTCAAAGCTGCTCCTTTGTCCCTGAAGCCTGTGAGTCCCTCCGATACTCTTTTAATTACGATCGTGAAGTCTGTTTGAAGTACTAATGAATAGAGTTTTGGCTAAATGATATATTGGTGATCAGTCCTTATCAGCTTTATTGTCGTTCTGATTACCTCTGAGCTGCTTGTTTCTGAAAATTTCCTTTTGAACATTCTATACTAAATTAGTTTGATGGCCCTTTGAATCAACAATTCTGGCTGGAAATGGTTTTTCTGTGCTACAATATGTGGTTCTTTCCTGTCTTTATCTGAGCTAGGATCTGCTTTGCCCAGCATAGTTAAAATGTTTTATCTGTATTGTCAACTCCAGGTTTCTTTATCTGGTTCCTGCGCTGGGATATTGGTAAGTTGGTAACCTCTCTCCATCGAGTAGAAGTAATGACATTTCCGTGTCTGTGCTAACTGGAAGTGCTTTTTGTATCTTCTTAATCAGTCCCATTTTCCCAATGCATAATTTCATGACTGACTGTCTCTTTGTTGAAAAAGTTATGGTTTATCATTGCACTTGTTCAATATGGGTTGATATATTTGGCTTCTTTCCGAACTATGCTTGCAATCTGTTCTTGATCGAAGAGGTCTTATACCTGTTATGCGTATGCTTAAGTTCCGATTCCCATAAGAGTTAATATGGTGAAGAATACTTGCAGCAACATGCATCTTTCTGGTTTAGTGAGTTTGTAGGTATACTCCTTCGTGATGTGAACTTAATTGCTGATATCCATTTGAATTGATTATTAACAAAACATGTCTGTCATTTTTCCCCATCTCCTTGATGACATGGTGATATTTGATATAGTATGTAAATTCACTCATATTATAGAAAATGCATGATAAACTAGTATATATTTTTCAATTACTACTATTGTAAGGGAGCTTCCTAATTTCAAACAAGACGTGCTATTGCTTAGTCTAATGTTGTAGGAAATCAATTGGGAACAAAATTAATAAAAGAACCAAAAATGAAGCTGCTAGTTATATTACTAATCACCATGCTTTGCAAGGAATTTAGAAAATGAAACCTGGGTAGGGGCGGCCTTTCCTTCTTCTGTCTTGGTTCATGATTGAGGCTAAATTCTAAAGGATTTGCAATTAACCAGTTTGCAATTTTATTTTTATCCCCAAGTGATTTAGTAGAAAAATCCTGGGGAGTTAAATGGGAAATTTGAGTTGATCTGCTCCGAATCGAATGGAAAATCCCAATCCAGGATAGGGGAGTTGGTAGCTGAAGTGTTGGCCGAGAAAATCTCATGGACATCAGATTCTAGAGGTTGCATATTATGAGTCCCTCCTATGTTGCTCCTTTGGCATGGGGATGGAGTGAAGTAGTTTGAGTCAGGTGTGGTTGGGGAGATAAATGACTGAGAAAAGCTTCCCAAGGCGGTGTGAGTGTCAATGGCTAAATGAGAAAAGCCACCATTTACAATGTCCTTACATCCACCAGAAGTTGAGCCGAAGCAGAATGTCAATGCCTTGTTTTCGAGCTTTTCGATGTTCTCAATAGTTTGATTACCAAATAAGCTCTCTTGTGCAGGCTGCTTCTGATGATGATCATGGCCGTGGTCGTTTTCCTTATTTTCTTGCTTTTCTGGTGAATGACATGATTGGGCTAAATAGTTCCCTTGGGAACAAGTGTGTTTTCCTCTATATGTAATTTCAAACACAGAAGGGTCTTCATCTGATCTCTGCACTTGCTTTACTGCCCAACAATTCTGAGTATTACGGAAAGTGCATCTATAGTAGCTTCTGCAAGTATACACCAGGTATTAGATTAATTGATGGGGAACAGAGAAGAAATCTCATCTTCATTAAGGTTATAACTATAGCTCTACAATCTTTTTCCTTATTTCTAAGTGATTCTTGTATTTTTTGGTTTCTTTCCTGTTAGTTAGTTTATTTACTTTTTAATAAAGTAGAGTTTTGACTTTGAATTTTGAGCTGCTGACATTTCTTTCTCTTGTATTTTCCTATCAAATTCCTTATATTCAAATTCTCTTTCTATTTCTCTTCTGGTTTTCCTTCATGTTGCCTATTGCATTCATCCATTAGAAAGAAAAAAGAAAAAAACACATAGTATGAGATCTCCCTTCTCCCCATTGAATTTTTTAGCATGTTTTTGTTTTATACTGAAGTAAAAAAGATGATTTGAAATATGAATGCATGGGCATTTGAATATATGTTCAGTGCATGGTTTGCATGTTTCCAGAGCAGGAAGAGGAAGAAATCATCTCACCTGGGATATGTTGCACCAAGTATGTCCTTTTGGCCATATTTTCTCCAGCTATAACCATCCTCGTGGGGTCCTTCAAATCCTGTCTCAGAGTTCACTTTCACTTGTACTTTCCATCTGGGCTGTGTCTTTCTGTAATCACAGAATTAGAACCATGTTATATAACTTGTCTATTAACCTCTTATTTGATTTCAGTTCTTAAAACTTGGCGAAAAAAGTTGGAAAGAAGATTCTAAACTCACCTCTTCTTTGATTCCTTTCTGGGGTCCTGCTGAGGGTCCTTGAGGCCTCTGCCAGAATCATCACTAGAAGCACTTCCATTGACAGAAATTGGTGACCCTGGCAATCCGGGGGCTACTTCCGGCATCGGAGGCTGATTCATTGGTGCGTTCCGTTTCAGTATCAAAAGAGCTCTTTCATATGAAGATAAAATCCCCTGTATTAATGATCCTCTGCTTTCTTCTGTAGATGCTGAACTCAACTCTGTTCTCAATCGCTTGGTAAGCTCCATCCCCTGAATTATCTCACCAACGAGTGACGTTTGATCCCAACTCCTCCCACCTTCCATTTTCAATACCTCTTTATTTCTTAAAATGAACTGATGCTCTACTATGCTAGTTCATAGTAGGAAGAACAAGAACTCAGCACATTTCTGTTTGGATTTATAGGTCTATCAAGAAGCAGAAGCTTTCTATCTAAGGAGAAGAAGCAGAAGGTAGAGCAAATGGAAGACCCAAATGGTAAAGAAACAAAGACAACAAACATGGAAGTAGCCAGGTAGGTAGTTTGGTTAACTGGGTATGTTTGTGTTTAATCAAAACCGAAGTAGAATAGAGAGAAGAAGAAGAACAAAGAGAGAGAGTGAGAGAGAGAGAGATGAGGAGAAGCTTTGGATTGAAGAAGAACCGGTCATGGGGTTCTTATAAGGAATTGAAAAGGGAAAACAACTTCGTTTCATTCTTTTTTAAAATTTTCTTGAAGATTTAGAATTGGGAAACTTTTGACTGAGACAAACCCGAGTTGCTTTCTTCCCTTGGCTCTTTGTTTTGATAGGCTGGTCTTTTTTGTGGAAGTCCAAGTTCAAAATCTGACCAAGTCCACTTCCACTTGGATCTAACTTCCAAAAGGGTTTCTCTTTCTCCCTCTAGATCCTACGGCTGTGGTTTGTGTTGAATGAAATTCCATGATTGAGATAGAGAGAGAAGTGGAAAGTCAAAGTCCATGCTTGGAGAGTAGACCAAGAATTTTCAAAGCTGAAATCCGCGTTGTAGTATAGTAAACATGTGCTCTCTCTCTCTTTTTAAATCTAATGCTTATGATTGTGAGTGAACAGCTCTTCCACGTAAGACTGCTGACTTGGATTTCTTGCATCATCAAATTCCAACTCTTGAGACCATTTCTTCTCTCACTATTTTATTTTACTTCTTTTTCTTTGATTCTACGTAAATTAGATCTTAGTCCTTAGCTTAGAAAATTTTGTAGTCAAAATTAGTGTTTTCTGTGTATGTTTATTTGATTAAAGTTTGAAA

mRNA sequence

TAGTGCTCCCGCACAATCGAAGGGGTTTTGTTGGAGCAGACGAGGGCGCGAAATAGAGAATTGAGATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACCGGTTCGGCGGACGGAACCGTCGTCATCTTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAACTTCAAGGTTCATGAGGCTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTATTGCATGCATTTGTTCAGATGGAAGTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGATTGCGGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCAAGTATATCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCAAGTTTTGTTTTGGCTTTTCATTCGGATACACCACAGCTTGATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTTGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGACATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACGTTTTGTTTCTCTATGATGTAACCGCTTCCTGTATTCGTTGTTAGGAAGAATTTTCAAATAACTTATCTGTCTTGCTGAGTGGGGTGCTTAGATTAGTGATGTCTTACTGGAGACCTATCTTTTATTTTAACAAATTTCTCTTGCTGAGTTGTGACTTCGGTTGCTTAAGAGGTATATAGTCAACACGTACACAGGAAGAATAACTGACTAGAGATATTTGAGAATTGAGTTTTAAGATGAGATGCTTATGAATTTGAAGGAAAATAATTAGTATAACTAAGGATAATATAGTATTTCCGTCCTCGAAAAGAACAGTTCTTAAGAACTTTAAAATGAGTTTTGGAAATTTAACTGTAAAAGGATTTGCAATAGCAGACGGTCCAAAGAAGCTTCCACTTCCAAATTCATCCAGCGTCGAGGATTGTGGAACAAGAATGGTTCATTGTCTTTGCAGAATTGAGCTCATATTGGGCCTAAATCTGGGGCCAAATTAGTGAAATGAGCTTTAGATCCGAGGGGATAGCAGCCGCCAACTCAAGAAGATGCCACTTTTTCTGCCGTGTTTCCCCAAGAACCTCTATGAAAAGATTCTGATTGCCTGAACTCTTGAGCACCGATTGATCGATGGGCAGGGCACATTTTCCAAGGCTCTTGCTTCTATTTTACTTGACACCAGCTTCTTCTACATTATTGCCAGATTAAAGTATGCTTCACATTCAAAGCTGCTCCTTTGTCCCTGAAGCCTGTGAGTCCCTCCGATACTCTTTTAATTACGATCGTGAAGTCTGTTTGAAGTACTAATGAATAGAGTTTTGGCTAAATGATATATTGGTGATCAGTCCTTATCAGCTTTATTGTCGTTCTGATTACCTCTGAGCTGCTTGTTTCTGAAAATTTCCTTTTGAACATTCTATACTAAATTAGTTTGATGGCCCTTTGAATCAACAATTCTGGCTGGAAATGGTTTTTCTGTGCTACAATATGTGGTTCTTTCCTGTCTTTATCTGAGCTAGGATCTGCTTTGCCCAGCATAGTTAAAATGTTTTATCTGTATTGTCAACTCCAGGTTTCTTTATCTGGTTCCTGCGCTGGGATATTGGTAAGTTGGTAACCTCTCTCCATCGAGTAGAAGTAATGACATTTCCGTGTCTGTGCTAACTGGAAGTGCTTTTTGTATCTTCTTAATCAGTCCCATTTTCCCAATGCATAATTTCATGACTGACTGTCTCTTTGTTGAAAAAGTTATGGTTTATCATTGCACTTGTTCAATATGGGTTGATATATTTGGCTTCTTTCCGAACTATGCTTGCAATCTGTTCTTGATCGAAGAGGTCTTATACCTGTTATGCGTATGCTTAAGTTCCGATTCCCATAAGAGTTAATATGGTGAAGAATACTTGCAGCAACATGCATCTTTCTGGTTTAGTGAGTTTGTAGGTATACTCCTTCGTGATGTGAACTTAATTGCTGATATCCATTTGAATTGATTATTAACAAAACATGTCTGTCATTTTTCCCCATCTCCTTGATGACATGGTGATATTTGATATAGTATGTAAATTCACTCATATTATAGAAAATGCATGATAAACTAGTATATATTTTTCAATTACTACTATTGTAAGGGAGCTTCCTAATTTCAAACAAGACGTGCTATTGCTTAGTCTAATGTTGTAGGAAATCAATTGGGAACAAAATTAATAAAAGAACCAAAAATGAAGCTGCTAGTTATATTACTAATCACCATGCTTTGCAAGGAATTTAGAAAATGAAACCTGGGTAGGGGCGGCCTTTCCTTCTTCTGTCTTGGTTCATGATTGAGGCTAAATTCTAAAGGATTTGCAATTAACCAGTTTGCAATTTTATTTTTATCCCCAAGTGATTTAGTAGAAAAATCCTGGGGAGTTAAATGGGAAATTTGAGTTGATCTGCTCCGAATCGAATGGAAAATCCCAATCCAGGATAGGGGAGTTGGTAGCTGAAGTGTTGGCCGAGAAAATCTCATGGACATCAGATTCTAGAGGTTGCATATTATGAGTCCCTCCTATGTTGCTCCTTTGGCATGGGGATGGAGTGAAGTAGTTTGAGTCAGGTGTGGTTGGGGAGATAAATGACTGAGAAAAGCTTCCCAAGGCGGTGTGAGTGTCAATGGCTAAATGAGAAAAGCCACCATTTACAATGTCCTTACATCCACCAGAAGTTGAGCCGAAGCAGAATGTCAATGCCTTGTTTTCGAGCTTTTCGATGTTCTCAATAGTTTGATTACCAAATAAGCTCTCTTGTGCAGGCTGCTTCTGATGATGATCATGGCCGTGGTCGTTTTCCTTATTTTCTTGCTTTTCTGGTGAATGACATGATTGGGCTAAATAGTTCCCTTGGGAACAAGTGTGTTTTCCTCTATATGTAATTTCAAACACAGAAGGGTCTTCATCTGATCTCTGCACTTGCTTTACTGCCCAACAATTCTGAGTATTACGGAAAGTGCATCTATAGTAGCTTCTGCAAGTATACACCAGGTATTAGATTAATTGATGGGGAACAGAGAAGAAATCTCATCTTCATTAAGGTTATAACTATAGCTCTACAATCTTTTTCCTTATTTCTAAGTGATTCTTGTATTTTTTGGTTTCTTTCCTGTTAGTTAGTTTATTTACTTTTTAATAAAGTAGAGTTTTGACTTTGAATTTTGAGCTGCTGACATTTCTTTCTCTTGTATTTTCCTATCAAATTCCTTATATTCAAATTCTCTTTCTATTTCTCTTCTGGTTTTCCTTCATGTTGCCTATTGCATTCATCCATTAGAAAGAAAAAAGAAAAAAACACATAGTATGAGATCTCCCTTCTCCCCATTGAATTTTTTAGCATGTTTTTGTTTTATACTGAAGTAAAAAAGATGATTTGAAATATGAATGCATGGGCATTTGAATATATGTTCAGTGCATGGTTTGCATGTTTCCAGAGCAGGAAGAGGAAGAAATCATCTCACCTGGGATATGTTGCACCAAGTATGTCCTTTTGGCCATATTTTCTCCAGCTATAACCATCCTCGTGGGGTCCTTCAAATCCTGTCTCAGAGTTCACTTTCACTTGTACTTTCCATCTGGGCTGTGTCTTTCTGTAATCACAGAATTAGAACCATGTTATATAACTTGTCTATTAACCTCTTATTTGATTTCAGTTCTTAAAACTTGGCGAAAAAAGTTGGAAAGAAGATTCTAAACTCACCTCTTCTTTGATTCCTTTCTGGGGTCCTGCTGAGGGTCCTTGAGGCCTCTGCCAGAATCATCACTAGAAGCACTTCCATTGACAGAAATTGGTGACCCTGGCAATCCGGGGGCTACTTCCGGCATCGGAGGCTGATTCATTGGTGCGTTCCGTTTCAGTATCAAAAGAGCTCTTTCATATGAAGATAAAATCCCCTGTATTAATGATCCTCTGCTTTCTTCTGTAGATGCTGAACTCAACTCTGTTCTCAATCGCTTGGTAAGCTCCATCCCCTGAATTATCTCACCAACGAGTGACGTTTGATCCCAACTCCTCCCACCTTCCATTTTCAATACCTCTTTATTTCTTAAAATGAACTGATGCTCTACTATGCTAGTTCATAGTAGGAAGAACAAGAACTCAGCACATTTCTGTTTGGATTTATAGGTCTATCAAGAAGCAGAAGCTTTCTATCTAAGGAGAAGAAGCAGAAGGTAGAGCAAATGGAAGACCCAAATGGTAAAGAAACAAAGACAACAAACATGGAAGTAGCCAGGCTGGTCTTTTTTGTGGAAGTCCAAGTTCAAAATCTGACCAAGTCCACTTCCACTTGGATCTAACTTCCAAAAGGGTTTCTCTTTCTCCCTCTAGATCCTACGGCTGTGGTTTGTGTTGAATGAAATTCCATGATTGAGATAGAGAGAGAAGTGGAAAGTCAAAGTCCATGCTTGGAGAGTAGACCAAGAATTTTCAAAGCTGAAATCCGCGTTGTAGTATAGTAAACATGTGCTCTCTCTCTCTTTTTAAATCTAATGCTTATGATTGTGAGTGAACAGCTCTTCCACGTAAGACTGCTGACTTGGATTTCTTGCATCATCAAATTCCAACTCTTGAGACCATTTCTTCTCTCACTATTTTATTTTACTTCTTTTTCTTTGATTCTACGTAAATTAGATCTTAGTCCTTAGCTTAGAAAATTTTGTAGTCAAAATTAGTGTTTTCTGTGTATGTTTATTTGATTAAAGTTTGAAA

Coding sequence (CDS)

ATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACCGGTTCGGCGGACGGAACCGTCGTCATCTTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAACTTCAAGGTTCATGAGGCTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTATTGCATGCATTTGTTCAGATGGAAGTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGATTGCGGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCAAGTATATCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCAAGTTTTGTTTTGGCTTTTCATTCGGATACACCACAGCTTGATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTTGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGACATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA

Protein sequence

MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

Homology

[Close]

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot
Match: SEH1_ARATH (Protein SEH1 OS=Arabidopsis thaliana GN=SEH1 PE=1 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 6.9e-125
Identity = 206/325 (63.38%), Postives = 260/325 (80.00%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           M K+MAT D GT CS+WN S  RL  GS +G + I++S   +SSS++ + TS  +V E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WKL K  K+ SSQ+LD+QFG S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
              LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           +GE Q+ SFVLAF+SD+P L+S+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEP 326
           G DGMV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

[Close]

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-33
Identity = 91/314 (28.98%), Postives = 160/314 (50.96%), Query Frame = 1


Query: 16  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSI 75
           ++++   R+ T S+D +V ++D  D    +     T+++K H  +++++ W  PE+G  +
Sbjct: 19  SYDFHGRRMATCSSDQSVKVWDKSDNGEWNC----TASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNS-----SQILDIQFGNSSSGLKMIAAF 135
           A    D ++++WEE+V ++   Q  LS   K  +     + + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCS 138

Query: 136 SDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+   R  S  +
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPS-SSRAHSPMI 198

Query: 196 LAFHSDTPQLDSAKV--WEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIA 255
                D+    S KV  +E+ +  +++  V  L    D    V+ +A+A N+GR + V+A
Sbjct: 199 AVGSDDSNTAYSGKVQIYEYVENTRKYAKVETLMTVTDP---VHDIAFAPNLGRSFHVLA 258

Query: 256 VATQKGIAIWRL-GLNPDSDG----RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD 315
           +AT K + I++L  +  +S      +L  +  A   GHN +VW + W++    LAS+G D
Sbjct: 259 IAT-KDVRIFKLIPMRKESSSSGPTKLEVQLQAQFDGHNSQVWRVSWNITSTLLASSGDD 312

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GCVRLWKANYMDNW 312

[Close]

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-b PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.0e-32
Identity = 83/314 (26.43%), Postives = 154/314 (49.04%), Query Frame = 1


Query: 16  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSI 75
           ++++   R+ T S+D +V ++D     S + +   T+++K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWDK----SENVNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSSSLWEEVVEDAQPL-----QWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAF 135
           A    D ++++WEE+V ++         W        + + + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFHSDTPQL-DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAV 255
           +     +P +    +++E+++  +++     L   +D    V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDP---VHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD 315
           AT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFENHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-a PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.0e-32
Identity = 83/314 (26.43%), Postives = 154/314 (49.04%), Query Frame = 1


Query: 16  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSI 75
           ++++   R+ T S+D +V ++D     S + +   T+++K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWDK----SENGNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSSSLWEEVVEDAQPL-----QWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAF 135
           A    D ++++WEE+V ++         W        + + + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFHSDTPQL-DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAV 255
           +     +P +    +++E+++  +++     L   +D    V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDP---VHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD 315
           AT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 83/314 (26.43%), Postives = 153/314 (48.73%), Query Frame = 1


Query: 16  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSI 75
           ++++   R+ T S+D +V ++D     S +     T+++K H  +++++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWDK----SENGDWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGSSSLWEEVVEDAQPL-----QWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAF 135
           A    D ++++WEE+V ++         W        + + + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAFHSDTPQL-DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAV 255
           +     +P +    +++E+++  +++     L   +D    V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSDP---VHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD 315
           AT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of Cp4.1LG01g00260 vs. TrEMBL
Match: A0A0A0KWZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051460 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 1.8e-164
Identity = 284/327 (86.85%), Postives = 305/327 (93.27%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEKAMATF KGT+CSAWNYS++RL T S+DGT+VIFDS  PSSSSTS T TSNFK HE A
Sbjct: 1   MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVA 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNSSQILD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
           SSGLKMIAAFSDG +KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK++C SASISWNP+
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFV+AF S+TPQL+SAKVWEFDQAH RWLPVAELAL A+KGD VYAVAWAQNI
Sbjct: 181 RGE-QQSSFVIAFSSNTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIW LGL+PD DGRLS ERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWHLGLSPDMDGRLSRERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of Cp4.1LG01g00260 vs. TrEMBL
Match: A5BBL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003214 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 1.7e-146
Identity = 246/327 (75.23%), Postives = 279/327 (85.32%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK++ T D GT CS+WNY+  RL TGS DGT+ IFDS+DP+SSS   T TS  +VHE +
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSS--FTCTSRSRVHEDS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I K+VWVPPEYGD++ CIC+DG+ SLWEEVVEDAQPLQWKL K F SNS+++LD+QFG S
Sbjct: 61  IVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
            + LKM++A+SDG+VKVYEL+DPL+LKSWQLQAEFQN  DS+ST  KA CLSAS+SWNP 
Sbjct: 121 PTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQ 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVL FHSDTPQL+SAKVWEFDQ HQRWLPVAELAL  DKGD V+ VAWA NI
Sbjct: 181 RGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGIAIW LGLNPD DGRLS ERVALLSGH+GEVW MEWDM GMTLA+T
Sbjct: 241 GRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATT 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVWH+ AA EPTS
Sbjct: 301 GGDGMVRLWQSNLNGVWHEQAALEPTS 325

[Close]

BLAST of Cp4.1LG01g00260 vs. TrEMBL
Match: D7TVD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01250 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.2e-146
Identity = 245/327 (74.92%), Postives = 279/327 (85.32%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK++ T D GT CS+WNY+  RL TGS DGT+ IFDS+DP+SSS   T TS  +VHE +
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSS--FTCTSRSRVHEDS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           + K+VWVPPEYGD++ CIC+DG+ SLWEEVVEDAQPLQWKL K F SNS+++LD+QFG S
Sbjct: 61  VVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
            + LKM++A+SDG+VKVYEL+DPL+LKSWQLQAEFQN  DS+ST  KA CLSAS+SWNP 
Sbjct: 121 PTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQ 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVL FHSDTPQL+SAKVWEFDQ HQRWLPVAELAL  DKGD V+ VAWA NI
Sbjct: 181 RGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGIAIW LGLNPD DGRLS ERVALLSGH+GEVW MEWDM GMTLA+T
Sbjct: 241 GRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATT 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVWH+ AA EPTS
Sbjct: 301 GGDGMVRLWQSNLNGVWHEQAALEPTS 325

[Close]

BLAST of Cp4.1LG01g00260 vs. TrEMBL
Match: M5W9X2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008587mg PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.6e-144
Identity = 247/328 (75.30%), Postives = 277/328 (84.45%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK +   DKGT CS+WNYS+ RL TGS DGT+ IFD+ DP+SSS S T  S  KVHEAA
Sbjct: 1   MEKPLVALDKGTTCSSWNYSSQRLATGSVDGTLAIFDTRDPASSSFSCTSKS--KVHEAA 60

Query: 61  -IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGN 120
            I KIVWVPPEYGD++AC+C+DG+ SLWEE  EDAQP+QWKL   FKS S+Q+LD QFG 
Sbjct: 61  GIVKIVWVPPEYGDAVACVCADGTLSLWEEAAEDAQPIQWKLCTSFKSGSAQLLDTQFGV 120

Query: 121 SSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNP 180
           S SGLKM+ A+SDG+VKVYEL+DPLDLK+WQLQAEFQNVIDS+ST  KA CL+ASISWNP
Sbjct: 121 SPSGLKMVTAYSDGHVKVYELLDPLDLKNWQLQAEFQNVIDSVSTFGKAMCLAASISWNP 180

Query: 181 NRGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQN 240
            RGE Q+SSFVL F+S+TPQL+S+KVWEFDQAHQRWLPVAELAL  D  D VYAVAWA N
Sbjct: 181 QRGESQESSFVLGFNSNTPQLNSSKVWEFDQAHQRWLPVAELALPGDNSDQVYAVAWAPN 240

Query: 241 IGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAS 300
           IGRPYEVIAVAT KGIAIW LGLNPDSDGRLS E++A LSGHNGEVW MEWDM GMTLA+
Sbjct: 241 IGRPYEVIAVATDKGIAIWHLGLNPDSDGRLSLEKIAQLSGHNGEVWQMEWDMSGMTLAT 300

Query: 301 TGKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           TG DG VRLWQSNLNGVWH+ A FEPTS
Sbjct: 301 TGNDGAVRLWQSNLNGVWHEEATFEPTS 326

[Close]

BLAST of Cp4.1LG01g00260 vs. TrEMBL
Match: V4TLV2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021146mg PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-139
Identity = 237/327 (72.48%), Postives = 274/327 (83.79%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           M+KA+AT DKGT  S+WNY   RL TGS DGT+ IFDS DPSSSS   T     KVH  A
Sbjct: 1   MDKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSS--FTCNLKTKVHAGA 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I K+VWVPPE+GD++ACICSDGS  LWEE+VEDAQPLQWKL K F+S S+Q+LD+QFG S
Sbjct: 61  ILKVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
           S+ LK++AA+SDG+VKVYEL+DPL LK+WQLQAEFQN IDS++  RKA+C+SASISWNP 
Sbjct: 121 STSLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQ 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           +GE Q SSFVL F+SDTPQL+S+KVWEFD+AH RWLPVAELAL  D+ D VYAVAWA NI
Sbjct: 181 KGENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIW +G NP+ DGRLS E+VALLSGH GEVW MEWDM G TLA+T
Sbjct: 241 GRPYEVIAVATQKGIAIWHVGANPELDGRLSVEKVALLSGHGGEVWQMEWDMSGTTLATT 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVW + AAF+PT+
Sbjct: 301 GSDGMVRLWQSNLNGVWDEQAAFQPTA 325

[Close]

BLAST of Cp4.1LG01g00260 vs. TAIR10
Match: AT1G64350.1 (AT1G64350.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 448.4 bits (1152), Expect = 3.9e-126
Identity = 206/325 (63.38%), Postives = 260/325 (80.00%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           M K+MAT D GT CS+WN S  RL  GS +G + I++S   +SSS++ + TS  +V E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WKL K  K+ SSQ+LD+QFG S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
              LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           +GE Q+ SFVLAF+SD+P L+S+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEP 326
           G DGMV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

[Close]

BLAST of Cp4.1LG01g00260 vs. TAIR10
Match: AT2G30050.1 (AT2G30050.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 91.7 bits (226), Expect = 9.3e-19
Identity = 83/314 (26.43%), Postives = 126/314 (40.13%), Query Frame = 1


Query: 18  NYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSIAC 77
           +Y   R+ T S+D T+ I    +   S    T T     H   ++++ W  P+YG  +A 
Sbjct: 20  DYYGKRIATASSDCTIKITGVSNNGGSQQLATLTG----HRGPVWEVAWAHPKYGSILAS 79

Query: 78  ICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKV 137
              DG   LW+E  ++    QW     F  + S +  I +     GL +    SDGN+ V
Sbjct: 80  CSYDGQVILWKEGNQN----QWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISV 139

Query: 138 YELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVL---AFH 197
           +          W         ID    V        S+SW P        S  L    + 
Sbjct: 140 FTARAD---GGWDTSR-----IDQAHPVGVT-----SVSWAPATAPGALVSSGLLDPVYK 199

Query: 198 SDTPQLDSA-KVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQK 257
             +   D+  KVW+   A+  W      AL+    D V  VAWA N+G P   IA  +Q 
Sbjct: 200 LASGGCDNTVKVWKL--ANGSWKMDCFPALQKHT-DWVRDVAWAPNLGLPKSTIASGSQD 259

Query: 258 G-IAIWRLGLNPDS-DGRLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKDGMVRLWQS 317
           G + IW +G   +  +G+       +L      VW + W + G  LA +  +  V +W+ 
Sbjct: 260 GKVIIWTVGKEGEQWEGK-------VLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKE 302

Query: 318 NLNGVWHQHAAFEP 326
            ++G W Q  A EP
Sbjct: 320 AVDGEWEQVTAVEP 302

[Close]

BLAST of Cp4.1LG01g00260 vs. TAIR10
Match: AT3G01340.1 (AT3G01340.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-18
Identity = 78/314 (24.84%), Postives = 124/314 (39.49%), Query Frame = 1


Query: 18  NYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAAIFKIVWVPPEYGDSIAC 77
           +Y   R+ T S+D T+ I    +   S    T T     H   ++++ W  P++G  +A 
Sbjct: 20  DYYGKRVATASSDCTIKITGVSNSGGSQHLATLTG----HRGPVWQVAWAHPKFGSLLAS 79

Query: 78  ICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKV 137
              DG   LW+E  ++    QW  +  F  +   +  I +     GL +    SDGN+ V
Sbjct: 80  CSYDGQIILWKEGNQN----QWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISV 139

Query: 138 YELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNP--NRGERQQSSFV-LAFH 197
           +              A      D+    +       S+SW P    G    S  +   + 
Sbjct: 140 FS-------------ARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYK 199

Query: 198 SDTPQLDSA-KVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQK 257
             +   DS  KVW+F      W      AL     D V  VAWA N+G P   IA  ++ 
Sbjct: 200 LASGGCDSTVKVWKFSNGS--WKMDCFPALNKHT-DWVRDVAWAPNLGLPKSTIASGSED 259

Query: 258 G-IAIWRLGLNPDS-DGRLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKDGMVRLWQS 317
           G + IW +G   +  +G        +L      VW + W + G  LA +  +  V +W+ 
Sbjct: 260 GKVIIWTIGKEGEQWEG-------TVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKE 302

Query: 318 NLNGVWHQHAAFEP 326
           +++G W Q    EP
Sbjct: 320 SVDGEWEQVTVVEP 302

[Close]

BLAST of Cp4.1LG01g00260 vs. NCBI nr
Match: gi|659102062|ref|XP_008451932.1| (PREDICTED: nucleoporin seh1 [Cucumis melo])

HSP 1 Score: 604.0 bits (1556), Expect = 1.6e-169
Identity = 293/327 (89.60%), Postives = 313/327 (95.72%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEKAMATFDKGT+CSAWN+S+SRL T S+DGT+VIFDS  PSSSSTSLTRTSNFK HEAA
Sbjct: 1   MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAA 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPL+WKL K FKSNSSQILD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
           SSGLKMIAAFSDG +KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK++C SASISWNP+
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVLAF S+TPQL+SAKVWEFDQAHQRWLPVAELAL A+KGD VYAVAWAQNI
Sbjct: 181 RGE-QQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of Cp4.1LG01g00260 vs. NCBI nr
Match: gi|449464070|ref|XP_004149752.1| (PREDICTED: protein SEH1 [Cucumis sativus])

HSP 1 Score: 586.6 bits (1511), Expect = 2.6e-164
Identity = 284/327 (86.85%), Postives = 305/327 (93.27%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEKAMATF KGT+CSAWNYS++RL T S+DGT+VIFDS  PSSSSTS T TSNFK HE A
Sbjct: 1   MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVA 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNSSQILD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
           SSGLKMIAAFSDG +KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK++C SASISWNP+
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFV+AF S+TPQL+SAKVWEFDQAH RWLPVAELAL A+KGD VYAVAWAQNI
Sbjct: 181 RGE-QQSSFVIAFSSNTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIW LGL+PD DGRLS ERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWHLGLSPDMDGRLSRERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of Cp4.1LG01g00260 vs. NCBI nr
Match: gi|147790324|emb|CAN61200.1| (hypothetical protein VITISV_003214 [Vitis vinifera])

HSP 1 Score: 526.9 bits (1356), Expect = 2.4e-146
Identity = 246/327 (75.23%), Postives = 279/327 (85.32%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK++ T D GT CS+WNY+  RL TGS DGT+ IFDS+DP+SSS   T TS  +VHE +
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSS--FTCTSRSRVHEDS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           I K+VWVPPEYGD++ CIC+DG+ SLWEEVVEDAQPLQWKL K F SNS+++LD+QFG S
Sbjct: 61  IVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
            + LKM++A+SDG+VKVYEL+DPL+LKSWQLQAEFQN  DS+ST  KA CLSAS+SWNP 
Sbjct: 121 PTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQ 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVL FHSDTPQL+SAKVWEFDQ HQRWLPVAELAL  DKGD V+ VAWA NI
Sbjct: 181 RGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGIAIW LGLNPD DGRLS ERVALLSGH+GEVW MEWDM GMTLA+T
Sbjct: 241 GRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATT 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVWH+ AA EPTS
Sbjct: 301 GGDGMVRLWQSNLNGVWHEQAALEPTS 325

[Close]

BLAST of Cp4.1LG01g00260 vs. NCBI nr
Match: gi|731378322|ref|XP_002270960.3| (PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera])

HSP 1 Score: 526.6 bits (1355), Expect = 3.2e-146
Identity = 245/327 (74.92%), Postives = 279/327 (85.32%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK++ T D GT CS+WNY+  RL TGS DGT+ IFDS+DP+SSS   T TS  +VHE +
Sbjct: 449 MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSS--FTCTSRSRVHEDS 508

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           + K+VWVPPEYGD++ CIC+DG+ SLWEEVVEDAQPLQWKL K F SNS+++LD+QFG S
Sbjct: 509 VVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVS 568

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
            + LKM++A+SDG+VKVYEL+DPL+LKSWQLQAEFQN  DS+ST  KA CLSAS+SWNP 
Sbjct: 569 PTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQ 628

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVL FHSDTPQL+SAKVWEFDQ HQRWLPVAELAL  DKGD V+ VAWA NI
Sbjct: 629 RGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNI 688

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGIAIW LGLNPD DGRLS ERVALLSGH+GEVW MEWDM GMTLA+T
Sbjct: 689 GRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATT 748

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVWH+ AA EPTS
Sbjct: 749 GGDGMVRLWQSNLNGVWHEQAALEPTS 773

[Close]

BLAST of Cp4.1LG01g00260 vs. NCBI nr
Match: gi|297742315|emb|CBI34464.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 526.6 bits (1355), Expect = 3.2e-146
Identity = 245/327 (74.92%), Postives = 279/327 (85.32%), Query Frame = 1


Query: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60
           MEK++ T D GT CS+WNY+  RL TGS DGT+ IFDS+DP+SSS   T TS  +VHE +
Sbjct: 1   MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSS--FTCTSRSRVHEDS 60

Query: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120
           + K+VWVPPEYGD++ CIC+DG+ SLWEEVVEDAQPLQWKL K F SNS+++LD+QFG S
Sbjct: 61  VVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180
            + LKM++A+SDG+VKVYEL+DPL+LKSWQLQAEFQN  DS+ST  KA CLSAS+SWNP 
Sbjct: 121 PTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQ 180

Query: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240
           RGE QQSSFVL FHSDTPQL+SAKVWEFDQ HQRWLPVAELAL  DKGD V+ VAWA NI
Sbjct: 181 RGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300
           GRPYEV+AVAT KGIAIW LGLNPD DGRLS ERVALLSGH+GEVW MEWDM GMTLA+T
Sbjct: 241 GRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATT 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           G DGMVRLWQSNLNGVWH+ AA EPTS
Sbjct: 301 GGDGMVRLWQSNLNGVWHEQAALEPTS 325

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g00260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SEH1_ARATH	6.9e-125	63.38	Protein SEH1 OS=Arabidopsis thaliana GN=SEH1 PE=1 SV=1	[more]
SEH1_OSMMO	2.1e-33	28.98	Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1	[more]
SEH1B_XENLA	4.0e-32	26.43	Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-b PE=2 SV=1	[more]
SEH1A_XENLA	9.0e-32	26.43	Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-a PE=2 SV=1	[more]
SEH1_XENTR	1.2e-31	26.43	Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1	[more]

BLAST of Cp4.1LG01g00260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWZ8_CUCSA	1.8e-164	86.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051460 PE=4 SV=1	[more]
A5BBL2_VITVI	1.7e-146	75.23	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003214 PE=4 SV=1	[more]
D7TVD9_VITVI	2.2e-146	74.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01250 PE=4 SV=...	[more]
M5W9X2_PRUPE	1.6e-144	75.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008587mg PE=4 SV=1	[more]
V4TLV2_9ROSI	1.5e-139	72.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021146mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g00260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64350.1	3.9e-126	63.38	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G30050.1	9.3e-19	26.43	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	7.8e-18	24.84	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Cp4.1LG01g00260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102062\|ref\|XP_008451932.1\|	1.6e-169	89.60	PREDICTED: nucleoporin seh1 [Cucumis melo]	[more]
gi\|449464070\|ref\|XP_004149752.1\|	2.6e-164	86.85	PREDICTED: protein SEH1 [Cucumis sativus]	[more]
gi\|147790324\|emb\|CAN61200.1\|	2.4e-146	75.23	hypothetical protein VITISV_003214 [Vitis vinifera]	[more]
gi\|731378322\|ref\|XP_002270960.3\|	3.2e-146	74.92	PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera]	[more]
gi\|297742315\|emb\|CBI34464.3\|	3.2e-146	74.92	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0051788	response to misfolded protein
cellular_component	GO:0005635	nuclear envelope
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g00260.1	Cp4.1LG01g00260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 278..309 score: 7.
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 47..88 score: 2.8coord: 98..139 score: 1.7coord: 271..310 score: 1.1E-6coord: 1..37 score:
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 278..310 score: 12
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 13..162 score: 3.1E-14coord: 201..311 score: 2.8
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 278..319 score: 10.68coord: 5..148 score: 9
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 13..311 score: 2.66
None	No IPR available	PANTHER	PTHR11024	PROTEIN TRANSPORT PROTEIN SEC13-RELATED	coord: 14..319 score: 2.4
None	No IPR available	PANTHER	PTHR11024:SF3	NUCLEOPORIN SEH1	coord: 14..319 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g00260	CmaCh04G006990	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g00260	CmoCh04G007430	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g00260	MELO3C016280	Melon (DHL92) v3.5.1	cpemeB415

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g00260	Melon (DHL92) v3.6.1	cpemedB486
Cp4.1LG01g00260	Silver-seed gourd	carcpeB0061
Cp4.1LG01g00260	Silver-seed gourd	carcpeB0839
Cp4.1LG01g00260	Cucumber (Chinese Long) v3	cpecucB0503
Cp4.1LG01g00260	Cucumber (Chinese Long) v3	cpecucB0538
Cp4.1LG01g00260	Wax gourd	cpewgoB0518
Cp4.1LG01g00260	Cucurbita pepo (Zucchini)	cpecpeB206
Cp4.1LG01g00260	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG01g00260	Cucumber (Gy14) v1	cgycpeB0239
Cp4.1LG01g00260	Cucurbita maxima (Rimu)	cmacpeB324
Cp4.1LG01g00260	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g00260	Cucurbita moschata (Rifu)	cmocpeB287
Cp4.1LG01g00260	Cucurbita moschata (Rifu)	cmocpeB313
Cp4.1LG01g00260	Wild cucumber (PI 183967)	cpecpiB405
Cp4.1LG01g00260	Wild cucumber (PI 183967)	cpecpiB431
Cp4.1LG01g00260	Cucumber (Chinese Long) v2	cpecuB406
Cp4.1LG01g00260	Cucumber (Chinese Long) v2	cpecuB432
Cp4.1LG01g00260	Bottle gourd (USVL1VR-Ls)	cpelsiB378
Cp4.1LG01g00260	Watermelon (Charleston Gray)	cpewcgB413
Cp4.1LG01g00260	Watermelon (97103) v1	cpewmB407
Cp4.1LG01g00260	Melon (DHL92) v3.5.1	cpemeB362
Cp4.1LG01g00260	Cucumber (Gy14) v2	cgybcpeB508