Cp4.1LG01g00060 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g00060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionB3 domain-containing protein
LocationCp4.1LG01 : 3870288 .. 3873672 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTAGTGTATATATAAACCAGGCTACAGGGATGTTGACACAGACAGCCTCACATGAGCCCAACCAGCTCAATCCATGGGAACCCTCCTCTTCTCTTCTCTTAACCATAACTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCTTCCTTTCTCTCTCTAGAAACCCAAACCAGAGAACAAATATTATTTTTCTTTTATTTTTTTTTTCTCTTTCAAGAAAAGAAAAAAGTTTCAATTTTTGCAACTGGGTTTTGTGTTTGGCTCTTGTTTCTCTTAATTTTTTGTGTTTTGGTTTGTGGGTTTTGGGCTTTTTTCCTTTTTGTGCTGTTTTTAGTATAATATCTTGAGAGATCCATTAATGGATTTGGGTTCGTGTTCTAGATTTGCGCTTGATTCAAGCACAGATTTTGAAAAGGAGGAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTAGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAGAGCTACGTCATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAGCGCCTCGATGCTGGTGATATCGTCTCCTTTCAACGAGGCCTTGGTCATCTTGGTAAAGATCGGTTTTTTATTGATTGCCGCCGCCGCCCACCTCATGCTCCGCTTGACACACCAATTACTTTTCACCACAACCACCACCTCCACGGCGGTGGAGCCGCCGGGGTTGCCCAAATTCCTCACCATTTTCACCTTCACCAGTGGACTCCAGTTGCCACACCCTTATCTTTACCCAGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATCATAATTTTAATCTCTATAATCATCATTATCTTAACCCTCCTCCCATCCGAGACGGCGGTGATTCGCCATCGGTTTTGTACCATTTAAGATCTGCACCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCGGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTGTCAACATGGAATGTGCAGTGTCTGAAGATCAATCCGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGCCTCAATTCCGCGTTTACGATGGAATGCCGATGTCGATACCAATACCGATGCCGAACAGTAACAACAAGCTGACGACCGACTTTTTCAATAAAGGGAGGTCGTCAAATTGAATCTACACCTCCAAAAAGCTTCATGAACAAACGAGGAAGATAATCAAATTGTAAGTCATGTAACCAATTTTAGTCATTTTTCTAGTTGGGGATGTGTTGAAAATTTGAATATGTTCTTGGTTTTTTCTGTAGGGCTCTCTTGGATTAAACCTCAGCGACAAGAATCCATAGAACACGTAGTGTAAACTGAAATGTAAGTTCAAGAAATGAAGAACATGAAGAACATGATGTTTTTACATAATTTCAATTCAATTGATTCATTGTTTGTTATGTTCTTGTAGGTAGCGATGGCTGTCTCTACTTGGTTGGACAAATGGCAAAGCCCATGCAGGTTTTGGCAGAGAAAAGTTTGAAAGAGATGGCTTTTAACAGGTTGGCTAATGGCTTATAAATTAATATATACATTCTAATCTTCATATTATATTATATTCATTCATTACTTAAAAAAAAAACCCTTTAATTATTTCTTCTTTTCTCACTTTCCAATCTTGTCTGGTAATTATGATGATGAAATGAATGTGTTTGTGCTGAATAGTATGAATTTTTTGTTTTCTTTCCCCTTCTTTTTGTTCTCTCCTCACTTAAACCAATTATTGGTCTTCTAAAAACACACTAAATTACTGTAGTTTAGGCACTACATTTTGCTGTTGGCTTTGTACATTGCCAATTGTAGCAACTGTCCCATTTCAGTTGTATTCTTTGCGTGTTCTTTATACTCGAGTATGTAAATCTCTCTTAGCAGACGCGTTTTAAAAACTTAGAGGGAAAACATGAAAGGAAAAACTCAAATAGAAAAGTATCTACTAGCAGTGAACTTGGATTGTAACGTATACTATTTATGAAAGGCTTTCGGTTTTGATATTTGATTTGGTTGACTTTGTTTAAACAAATTTATGAGTAAAAGTAAGCCCTTATGTGAAATGGGATTTAAGATATGAAAATGACAGTTCTATATATGGATATATATTTAACACATCTTCTGGAGGGACTAATCCCAATCAATTAACAATAATTGAAGGATTAAATGCAAATAAATACGACTTTTAGGGAGTGACCCAGTGGGAAGCTAGCTAAGTTATTGCTATCTCACTCCAAAGATCCATTTTTTTTTCAGGTCATTTATTGCTTATTTACACATAAAAACACATGATCCAAGTATTTATATGCTATTTAATTCTTCAAATATTTAGTATTTATGCTCCTAGCTAGCTATTGATGATCTTACTCCTATTTCCCTATTATTATGTGGTTTTGTTATAAATTGATTAGCTCTAGTAGCTTAATAATGCACTTGTTTATGAACAATTTTACTTGTTTTTCTTCTAATGGCCATAAAATCATACCATTTACTACTACCACTCATCAACATATGCTTGGTTGCATTCATTTACTACTTTTTCATATCCAAAATTCTTTGTTTTTGACATGAATTATGGCTTTTTAGCATGAGAATTCAGAGAAATGAACTGCTTCTATATATATATTTGTCTTGCCTTCATGATGTAGTGAGTAAATTGATGTAGTGATTTTAGGGTTGGTCGAAGTGTTGAAGCATTGTTTGGACCAAAAAACATAACAGTTAAACCATAACAGACAACATAGGAACACAAATGCTGCCGTCCAATTCTTGTTCTTGATATTGTTGATCATCTCATGAATGCTTTTTTTTTTTTATCTTTTTTTTTTGTGCAGTTTTGGATATGGCAGTGGAAGCAACTGCTTTCTTTTTCTGGTGATTAAATGCTTCATTTCTGTTGACAATCACAGTCTCACAAACAAGTTTGGTTTTGTTTATAGGTTTTGACATCTTTGTTCCAAGGTGTGTTTTTTGTTCTGACAATGTTCTAAATTTGTGTCTCTTGTGTAAAACATTATTGTAACATGCTTTTAATTTGTAATATTTTTGGGAAATGTTTAGAGGGAAAAGGAATTAAAGTGTTTCTTTTTTTCTTCTTTTTCTTTTAAGGGAGATGCTTATTCACAGGGTTTTATAATCAATAATAATGAATGA

mRNA sequence

ATGAAAAAGAAAAAAGTTTCAATTTTTGCAACTGGGTTTTGTTATAATATCTTGAGAGATCCATTAATGGATTTGGGTTCGTGTTCTAGATTTGCGCTTGATTCAAGCACAGATTTTGAAAAGGAGGAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTAGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATCATAATTTTAATCTCTATAATCATCATTATCTTAACCCTCCTCCCATCCGAGACGGCGGTGATTCGCCATCGGTTTTGTACCATTTAAGATCTGCACCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCGGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTAGCGATGGCTGTCTCTACTTGGTTGGACAAATGGCAAAGCCCATGCAGGTTTTGGCAGAGAAAAGTTTGAAAGAGATGGCTTTTAACAGTTTTGGATATGGCAGTGGAAGCAACTGCTTTCTTTTTCTGGGAGATGCTTATTCACAGGGTTTTATAATCAATAATAATGAATGA

Coding sequence (CDS)

ATGAAAAAGAAAAAAGTTTCAATTTTTGCAACTGGGTTTTGTTATAATATCTTGAGAGATCCATTAATGGATTTGGGTTCGTGTTCTAGATTTGCGCTTGATTCAAGCACAGATTTTGAAAAGGAGGAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTAGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATCATAATTTTAATCTCTATAATCATCATTATCTTAACCCTCCTCCCATCCGAGACGGCGGTGATTCGCCATCGGTTTTGTACCATTTAAGATCTGCACCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCGGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTAGCGATGGCTGTCTCTACTTGGTTGGACAAATGGCAAAGCCCATGCAGGTTTTGGCAGAGAAAAGTTTGAAAGAGATGGCTTTTAACAGTTTTGGATATGGCAGTGGAAGCAACTGCTTTCTTTTTCTGGGAGATGCTTATTCACAGGGTTTTATAATCAATAATAATGAATGA

Protein sequence

MKKKKVSIFATGFCYNILRDPLMDLGSCSRFALDSSTDFEKEEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRDHLLHLPQNNSNHNNLTLFHNHNFNLYNHHYLNPPPIRDGGDSPSVLYHLRSAPPPPPVAVGGGGGGIGKGAASSKTLRLFGSDGCLYLVGQMAKPMQVLAEKSLKEMAFNSFGYGSGSNCFLFLGDAYSQGFIINNNE
Homology
[Close]
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 1 

Query: 56  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD++SN+KGLLL+FEDR GK WR
Sbjct: 31  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDRTGKPWR 87

[Close]
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=3 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-23
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 1 

Query: 56  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDS++N+KGLLL+FEDR GK WR
Sbjct: 104 IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWR 160

[Close]
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 1 

Query: 56  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           VEKEHMFDKVVTPSDVGKLNRLVIPKQ+AEKYFPLD+++N+KGLLLNFEDR GK WR
Sbjct: 90  VEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWR 146

[Close]
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-23
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 40  EKEEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGL 99
           E+E +   E E +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSSSN+KGL
Sbjct: 13  EEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGL 72

Query: 100 LLNFEDRCGKSWR 113
           LLNFED  GKSWR
Sbjct: 73  LLNFEDLTGKSWR 85

[Close]
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match: NGA2_ARATH (B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-22
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 1 

Query: 42  EEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS---NDKG 101
           +E +++ +E +S  +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD+S+   ++KG
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKG 62

Query: 102 LLLNFEDRCGKSWR 113
           LLLNFEDR G SWR
Sbjct: 63  LLLNFEDRSGNSWR 76

[Close]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match: A0A0A0KZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 64/89 (71.91%), Postives = 70/89 (78.65%), Query Frame = 1 

Query: 34  DSSTDFEKEEQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 93
           D     ++++QQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 94  AEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           AEKYFPLDSSSN+KGLLLNFEDRCGK WR
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWR 117

[Close]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match: A0A078IPA9_BRANA (BnaC03g72370D protein OS=Brassica napus GN=BnaC03g72370D PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 1 

Query: 32  ALDSSTDFEKEEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD 91
           A +   + E+EE+++ E +  +  VE+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD
Sbjct: 8   AREGEGEEEEEEEEEAEAKKPTEEVEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLD 67

Query: 92  SSSNDKGLLLNFEDRCGKSWR 113
           SSSN+KGLLLNFED  GKSWR
Sbjct: 68  SSSNEKGLLLNFEDLTGKSWR 88

[Close]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match: A0A061DTX9_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_005014 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 52  SSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSW 111
           SS  +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN+KGLLLNFEDR GKSW
Sbjct: 100 SSRSIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKSW 159

Query: 112 R 113
           R
Sbjct: 160 R 160

[Close]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match: A0A067H3S6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015743mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-23
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1 

Query: 50  ESSSLF--VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRC 109
           ESS ++  +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN+KGLLLNFEDR 
Sbjct: 118 ESSGMYRSIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRN 177

Query: 110 GKSWR 113
           GK+WR
Sbjct: 178 GKAWR 182

[Close]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match: V4U6Y0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020450mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-23
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1 

Query: 50  ESSSLF--VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRC 109
           ESS ++  +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN+KGLLLNFEDR 
Sbjct: 118 ESSGMYRSIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRN 177

Query: 110 GKSWR 113
           GK+WR
Sbjct: 178 GKAWR 182

[Close]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match: AT2G46870.1 (AT2G46870.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 53/73 (72.60%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 40  EKEEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGL 99
           E+E +   E E +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSSSN+KGL
Sbjct: 13  EEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGL 72

Query: 100 LLNFEDRCGKSWR 113
           LLNFED  GKSWR
Sbjct: 73  LLNFEDLTGKSWR 85

[Close]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 1 

Query: 42  EEQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS---NDKG 101
           +E +++ +E +S  +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD+S+   ++KG
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKG 62

Query: 102 LLLNFEDRCGKSWR 113
           LLLNFEDR G SWR
Sbjct: 63  LLLNFEDRSGNSWR 76

[Close]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match: AT1G01030.1 (AT1G01030.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.8e-23
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1 

Query: 57  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLDSS+N  G LLNF+DR GK WR
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWR 106

[Close]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match: AT5G06250.2 (AT5G06250.2 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 58  KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL----------DSSSNDKGLLLNFEDRC 113
           KE +F+K +TPSDVGKLNRLVIPKQHAEKYFPL          D+SS++KG+LL+FED  
Sbjct: 42  KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101

[Close]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match: AT4G01500.1 (AT4G01500.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-17
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 

Query: 58  KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           +EHMFDKV+TPSDVGKLNRLVIPKQHAE +FPL+ + N  G +L+F+D+ GK WR
Sbjct: 32  REHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN--GTVLDFQDKNGKMWR 84

[Close]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match: gi|778690845|ref|XP_011653180.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 64/89 (71.91%), Postives = 70/89 (78.65%), Query Frame = 1 

Query: 34  DSSTDFEKEEQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 93
           D     ++++QQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 94  AEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           AEKYFPLDSSSN+KGLLLNFEDRCGK WR
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWR 117

[Close]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match: gi|700198178|gb|KGN53336.1| (hypothetical protein Csa_4G047970 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 64/89 (71.91%), Postives = 70/89 (78.65%), Query Frame = 1 

Query: 34  DSSTDFEKEEQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 93
           D     ++++QQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 94  AEKYFPLDSSSNDKGLLLNFEDRCGKSWR 113
           AEKYFPLDSSSN+KGLLLNFEDRCGK WR
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWR 117

[Close]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match: gi|659102258|ref|XP_008452034.1| (PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 5.7e-26
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1 

Query: 40  EKEEQQQQEMESS------------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY 99
           ++++QQ QEME              S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY
Sbjct: 33  QRKQQQDQEMEEESCNNNSSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY 92

Query: 100 FPLDSSSNDKGLLLNFEDRCGKSWR 113
           FPLDSSSN+KGLLLNFEDRCGK WR
Sbjct: 93  FPLDSSSNEKGLLLNFEDRCGKLWR 117

[Close]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match: gi|1021524863|ref|XP_016205813.1| (PREDICTED: B3 domain-containing protein Os03g0120900-like [Arachis ipaensis])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-23
Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 51  SSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKS 110
           SSS  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDR GK 
Sbjct: 95  SSSEAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRNGKL 154

Query: 111 WR 113
           WR
Sbjct: 155 WR 156

[Close]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match: gi|1012181423|ref|XP_015968292.1| (PREDICTED: B3 domain-containing protein Os03g0120900 [Arachis duranensis])

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-23
Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 51  SSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKS 110
           SSS  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDR GK 
Sbjct: 96  SSSEAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRNGKL 155

Query: 111 WR 113
           WR
Sbjct: 156 WR 157

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g00060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3209_ORYSJ1.2e-2389.47B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y4814_ORYSJ2.0e-2387.72B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y2835_ORYSJ2.6e-2387.72B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA1_ARATH3.4e-2372.60B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 P... [more]
NGA2_ARATH3.8e-2268.92B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 P... [more]
BLAST of Cp4.1LG01g00060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZM6_CUCSA1.8e-2671.91Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1[more]
A0A078IPA9_BRANA1.4e-2370.37BnaC03g72370D protein OS=Brassica napus GN=BnaC03g72370D PE=4 SV=1[more]
A0A061DTX9_THECC1.4e-2391.80AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
A0A067H3S6_CITSI3.1e-2386.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015743mg PE=4 SV=1[more]
V4U6Y0_9ROSI3.1e-2386.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020450mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g00060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46870.11.9e-2472.60 AP2/B3-like transcriptional factor family protein[more]
AT3G61970.12.1e-2368.92 AP2/B3-like transcriptional factor family protein[more]
AT1G01030.14.8e-2385.71 AP2/B3-like transcriptional factor family protein[more]
AT5G06250.23.5e-1866.15 AP2/B3-like transcriptional factor family protein[more]
AT4G01500.15.1e-1769.09 AP2/B3-like transcriptional factor family protein[more]
BLAST of Cp4.1LG01g00060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690845|ref|XP_011653180.1|2.5e-2671.91PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus][more]
gi|700198178|gb|KGN53336.1|2.5e-2671.91hypothetical protein Csa_4G047970 [Cucumis sativus][more]
gi|659102258|ref|XP_008452034.1|5.7e-2674.12PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo][more]
gi|1021524863|ref|XP_016205813.1|1.2e-2393.55PREDICTED: B3 domain-containing protein Os03g0120900-like [Arachis ipaensis][more]
gi|1012181423|ref|XP_015968292.1|1.2e-2393.55PREDICTED: B3 domain-containing protein Os03g0120900 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00060.1Cp4.1LG01g00060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 62..125
score: 1.
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 55..113
score: 6.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 59..122
score: 1.57
NoneNo IPR availablePANTHERPTHR31140FAMILY NOT NAMEDcoord: 29..112
score: 1.5
NoneNo IPR availablePANTHERPTHR31140:SF4B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATEDcoord: 29..112
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g00060CmoCh04G007850Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g00060MELO3C016356.2Melon (DHL92) v3.6.1cpemedB486
Cp4.1LG01g00060CsaV3_4G005920Cucumber (Chinese Long) v3cpecucB0503
Cp4.1LG01g00060Bhi01G001809Wax gourdcpewgoB0510
Cp4.1LG01g00060CsGy4G005630Cucumber (Gy14) v2cgybcpeB508
Cp4.1LG01g00060Carg22199Silver-seed gourdcarcpeB0839
Cp4.1LG01g00060Carg14136Silver-seed gourdcarcpeB1302
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g00060Cp4.1LG14g02110Cucurbita pepo (Zucchini)cpecpeB233
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g00060Cucumber (Gy14) v1cgycpeB0239
Cp4.1LG01g00060Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g00060Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g00060Cucurbita moschata (Rifu)cmocpeB313
Cp4.1LG01g00060Wild cucumber (PI 183967)cpecpiB405
Cp4.1LG01g00060Cucumber (Chinese Long) v2cpecuB406
Cp4.1LG01g00060Watermelon (Charleston Gray)cpewcgB405
Cp4.1LG01g00060Watermelon (97103) v1cpewmB408
Cp4.1LG01g00060Melon (DHL92) v3.5.1cpemeB415