Cp4.1LG00g09630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g09630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Histone deacetylase 2a
Location	Cp4.1LG00 : 29401833 .. 29408787 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCTGGGGTATGTGATCCTGGTTTTTGTTCTTGTTGGCTTAAGCTAAGAAGTTTCAATGTGTTTAAACAGCTATGAGTTATTCACTTCTGCATTTTGTTTCGTACTCATAATTCTTTCTCCTGCATTTATCCTGTCATCGTCTATGTAGTATATAAGAGTTTTAGAAAGTTATTGAATTACTCGTTTGAAGCTTCTTCATCCTGTTTTCTTGTTTGCACTGGAGGTTTAAAGGGTTGGGTACATATACTATTGTATCCGTTTGAATTTTGGAACTTTCAGATGAACAACTTGTCGTAATGTATGAAGCAGATGCATAAACTGATGTTTTATGGATGTCTCAGTGTGATAATGTTGTCTCGTAATATTTTAATTGACAAATACTTGTGAATTCTTGAAAGTTCATGATGGATTTGTGTTCTTAGGTGTTGAGGTTAAGCCTGGTCAGGCACTCTCTGTGAAGCCTGGAGATCAGAAATATCTGCATCTATCACAGGTACTGTTGTTGCTGCTGTAGTTGTTGACTTTATTTTAGAATTTTTGCCCAGTTGAGCCCTTTGGCCTCTTTGTTTGATATCAATCCCCCATTATAGTTAACTTGATGAAATCTTTTTATGCAGGCTACTCTTGGTGAATTAAAGAAGGACAAATCGAAGGAATCCGTGACTATTTTTTTGAAGATTGATGAACAGAAGCTTGTTCTGGGAATTCTCTCTGCAGAGAAGTTCCCTCAGCTATCATTTGATCTCGTGTTCGAGAAGGAATTTGAGCTCTCACACAACGGGAAGAGTGGAAGTATTTACTGTATGGGATACCAGGCTTCTGCAGAAGACCAAGAACAATATCCTTTCTTACCAGCTTGAGCGATTTTGTTTCCCCTTGTAACAATGATACTGAGTTGTTTCATTTTATGGTTGTTGTAATTGAAGTCAGAAGCCACATTTCTTATTTGATTTTAAGATTGTGCTATCATAGCCTATGAGTTTGGTTTCAAGGGAATTATAGCTATCTTGGAAGTCAGTTATGCTATTTAATATGATGACATTTGTTTTTACACCTCTATTTTCATTTATTTCTATTATCCGTTTCTTCCTTAACTCTTATATCTTGTCTTCTCTTTTCCACTGAAGAGTATTCTGGTAAGTTTCTAAGCATTCACATGTCTAGTACCCAGACAGATCCTTTCTGTTTCTGATTATGAAACTGATTAGCTGAGTGTGTGTTTTCTCATTTCAGATTCTGATTTTGGCTCAGAGGACGAGGAACTTGCTCTGCAACATGTGCCGAATGGTAATTGCATTCGGTCGTGTAAATATAATAGGAGCTTGGTTACTAGAAATATTCTTGGCACTGCCTCCTTATCTCGTGATGATCTACTTTCAGGAAAACCTATCCAGAAGGAGGAGAAGTCTATTGTGGGAAAACATAGTTCTTTGAAGCCCGAAACTTCAAAGAAGACACATTCTAAGTCTCTTGAACCAAGCAAGGAGGACGAGGATGACGATTCTGAAGATGACGATGAATCTGATGATGAGGATTCAAGTGATGAGTCTGATGAGGTAATTGAAATCAAAGTCTTTTGCATCTATTATATTCTGGGAGAAATGATCGAAAAAGACGTTTTTGTTTCCTTGCCTGAAGAGCATGACACAGGTACCTTGCAATAAGAAGGGAGTTGAAATTGTCATTATTTTAGTATTCTTAATAAAAGACTTTTTTCATATGTAAATATTTTAGTTACATTTTCCTACTGTGTGCTCCCCAATAACAAATCCCTCACCTTTGTTTTGTCTTGTGCCTAAGTTCTTGAGGGTTATCGTATTTCTTGTCTATCTCGTTAATATCAGTCATGCATATGAAATTGGGATCACTAAGTATACATGATTCAATAATGACTCTTGGTATTAATTTGGTTCTTACTGTGAGTGTTTTCAATATTGGATTGTAGTAATGACACCTTTGGTTCGCTTCTATAGTTATTATTATGGAAGTCATCAGGATAGGCCTCTTCATGTGCTTTCAAAACACTGCATCAAGGAAATGATATGCAACCTAAACATATTTGTTCTTTATGATTCACGCAACAAGCTTTCACCATTTGTGGTTTTGGAATTTTATCTATTCAATTAGTTAATCTTGTCATGGCGACCTTTTGAGGTTTTTGATTGTTCTTCAATTTTGATTTGGGCATTGTCCCAGCTATAACCCCGAACCCTTTTTGTTTAGTTGCTTAGTATTCATTAGATAATGAAATTATGTTGATAAATTGCAGGAAATGCTCGGATCTGACAGTGACTCTGATGATGAAGATGATGATATTGAGAGTGAGGAGGAGACACCAAAGAAAAAGGTGTATTTTTACTCCTCGTGTAACTTCTATATTGAAACATCTAATGGATCTCATTTATAGTTTTCTTTTAGCATCATTTTTATCAGCTCGTGTGCTCTTGTAGGTCGAATCGAACAAGAAGAGGTCGAATGACTCTGCCTCGGTGACCCCTGTTTCTAAGAAGTCCAAGCTAGCTTCGGCTGAGAAGTCCGGTGATTCTTTTAACCATTCATTTATTTCCTACTAATGTTAATAAGCCTCAAATTTGTTTCTTGGTACGCCATTAAAAGCCCCATTGATTTAAATTGGTCCTGAACTTATTAGTTGTTTGTTGCCAGATGCTAAAAAGGGCGGCCATACAGCCACTCCCCACCCTGCTAAGAAACCTCTGAAAACCCCAGCCAAAGCAGCCACTCCAAAATCCGGTGGCCAGTTCTCTTGCAAATCATGCGACAGGTTTCTTTGTTCTCTCTATATATACATTTTACTCATCATCATTGGAAGCGACCCGACGATGCTAATGTCATGTCCTCTGTTGTTCGTTTAGGTCCTTCGGTTCGGACGGTGCCCTTCAGTCGCACGGTAAAGCAAAGCACAGTGGTGGTAAGTGAAAAGAAGAGTTAGCAGTGAAGGATAACATATTATTTTGCAGCTCCAATATGTTATTCTCTAAGATAGGTCGTCACACCATGGCTGAGATTTCGTGTCGACATTTGATTATAAAACGAGAAGCCATGGCTGAGATTATATTATTCTGTGTTTAGGACTTCAATATCATTATAATTTGTTAGGGAACACTTCAGAAAATCAATCTTAGTTCAGCTAATCCTTCTCTGAGTTATAACAAAAATGCATAATCTTTTTATTTTAGAATATATTCATTGATATTCACATTTAATTGATTACTTCATTAATCTTAATCATTAATCAATACTAAATAGTAAACATGATGATATTAAAGCATAAATCTATTAAAAATTCTAAATTAATACGTACTAATAATAAATAAATGAAATTCAAATTATAACTATTAAGCAATATTTTGATTATTAACGTTTTAAGTGTCGTTAATTATTAATTAGCGGCTTTCAAAAAAATATTAATTAGGCCCAAGCCCACACTTACATGGGCCAAGATGCAGGCCCACACTAACATGGGCCAGTATGCAGGCCCACACTTACATGGGCCAAGATGCAGGCCCACACCGACATTGAAATTTGTCAATCGATGATTTGAAACCCTAAGCTACCCGGAAAGCTGGCGCCAATTCCCATATAAAATGTTCAAACATTTTCGACTGCCAATCACGTCTGTCCGATCGTTCGTTCTGAAGTTGTGTCACTGTTCATTTCTTCTTCAGGGCTTTTCTTAAACCCTAGAGTCTTCTACGTGCACTGTCGATGGAGTTTTGGGGTAAGCTATTGTTCTTTTCCTTCTTCTCAGCTTTATCGTTTATCATGTTTCTCCACTCTTCACTTTTGCTGCCGTCTGTATCAATATATNTCGTTTATCATGTTTCTCCACTCTTCACTTTTGCTGCCGTCTGTATCAATATATATGTTTTTCGGATTGCTTCGTTTATTGTTTGTTTTTTTTGCTTTTGTTCTCTCAATCTCTTTAGCTTGTTTTTGTTGTAACCAGTTCTCGTAGTATTTGGATTGCTTAAAGTCATCACGATTTTTTTTTTTCCTTTTTTTGTGACATGATGAACTAAGAACATTCGTTATATAATTGGTATTGTAGGTGTTGAAGTCAAGCCTGGTCAGGCACTCGTTGTGAAGCCTGGAATTCAGCAGTACCTGCATCTATCACAGGTAGGGGCTGTTCTCATTATTGCTATTATCATTTTCCCAGTTGAACTACATGGTTTGGTGTAAGGTCTTCTCACGTAGCACATTTGATGAAATGTTTTTATTCAGGCGACTCTAGGTGAAACAAAGAAGGACAAAGCAAATGAAAACGTGACCATCTTCTTGAAGATTGGTGGCCAAAAGCTTGTTCTTGGCATTCTCTCCTCAGAGAAGTTTCCCCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCCCATAATGGGAAGGGTGGAAGTGTTTACTGTGCTGGATACCAGGCTTATGCCGAGGATCAAGATCCATATCCTTTCTTTCCTTTTTGAGGATTTATATTTCCCCTTAGATTAACGATAATAAGCTTATGTATTATTTGAAGATTATATTTGTTAGTGTCTCATGGCCGGCCTTAAAGTTTATAGTAGTTCGTATAGGTGATCAAAAGATTTGATGTATGCATATTTTTATTAATTAGCTTAATTAGAATTTTTGAAGCTGATGCTACTTCATATGATGGGATTGAGTTTTTTTTTTCCTTGACCACTTCCTGTTCTCTCTTTTCCACTGGCGATTATTTTGGTAAGTTGTTTCGCATTCATAAGATTTGTACCTCGACACATGTCTATTGAGGAAGATTAACTTAGAGTGTGTTGTATCTATTCAGATTCTGATTCTGGCTCGGAGGATGAAGAACTTGAATTGCCCCTTGCTCAAAACGGTAAATGCAAGCCACTACTAAAACGTTGGTGTTTTTTTTTTGGAAATATACTCAAGACTCTGTACGCATTATCTCATGATGACTCTCTATCAGGGAAAGCTACCCAGAAGGAGAAGGCTATTGCCGATAAAAGTAATGCTGCAAAGGCTCTGTCTTTAAAGAAGTCAGATGCAAAGCCTTCGAAACCAAGCAAGGATGAAGATGACTCTGAGGATGACGATGACTCTGACGAAGATGAAGATTTTGATGATGAATCGGATGAGGTATAGATTCTTTCAATTGTGTTTGTATTCAAATTATTTGTTTGCTATGGATTTTATCTATCTTCTGAAAATGTTTGAATTCTTTGCCAAATTCAAAAGACTAGAAACAGGATTTTGAAAGCTAGATAAGAAAACAGGAAATCCACCGGTAGAACTAATATTTATAATCTTCATTGTCAAAAACCAAAAATCAAATAGTTGGAAAATTGTTGGTGAGTTCTTCCATGCATCAACTGAATATAAGTGATTCCTTCGTGGGTGGCATTTGAATTTTTATCGAACTGAAAGCCCTAGATTATTGTTAATACCATTGTTGGTTCTCCTCCACATTTAACTTTGCCTATTACCTTTTTTCATGTGAAGTAATCAGGAGGTGAGATTCTACATTTTCTTTTGTTGTATATTTTTCCCCCTTCTCGTGTCCTGTTCTGAAATGGCCTTCCAATTCATATTTACATACAAGCATTGAATGTATGTTGTTTTTTTTTTATGAAACATTTGCAAAACACTAAAAATTTGGTTCACTGAAGTTTATATTCAAAATCACGTGAGCAATACTCTTAATCTGGAGTGTATGCATCATAGTCTACGGTGACTATTTCAGTTTTCATTTATTTCTGTGATTTGGCTTGGACATTTACATTGTGATAATCGGCAGGAAATGCTCAATGCTGACAGTAGCGAATCTGATGATGAAGATGATGACACTGAAAGTGATGAGGAGACACCGAAGAAGGTGCTTGTGATCATAGTAACGTTGTCATCTTCTTTATCATATGTAGCATCATATTGATTACCTCTTATCCTTGTAGGTTGAAGCAACCAAGAAGAGGCCAAATGAGTCTGCCTCCAAGACGACTCCCCTCCCTGCTAAGAAAGCAAAGTTAGCTTCGCCTGTAAAGACTGGTAATTCTTTCAACTATTTAAGGCAAAAATATTTCACTATTTTGTTTTTTGTTTCCTGTCTTTTTGTTTGCATCCTCTTTTTTATAAAGATAAACAGAAGTACATTTGGTAACCTTTTCTTATTTCTTGTTCATTCTTCTTTATAGAAAAAAACAAAACAGATACATGTTAGGTAATCTTATCTTGTTTATTGTTCATTCTTCTAAATATGCAAAAAATTTATTTGAAAATTACTTTTTAAAATTAAAAACCAACATTTTTATGTTAATACTACTTGTAGATATTTATTGTGCATTTTAAGAGTAAAAATGATTACAGTAACTAAACACGAACATTACCAAACGACTCCTTATTTACTCCATACTTTTGCATTTTGGCAAAAGCATTGTTTCAAGAATGTCAATTATTTACTCTTTTTAGAGCTTTATAGAATTGCCAATTATAGCAAAAGCTTGTCTCTTCCGTTATCAACTGATCATAATGTAGTCTATATTCTGAAATTGTTGGTTGTGTATTGCCAGATTCAAAGAAGGGGGGCCATACTGCCACTCCCCACCCAACCAAGAAGAACGCTAAAACTCCTGCCAAATCAGAGACCCCAAAATCTGGTGGGCAGTTCTCTTGCAAATCCTGCGACAGGTATGTTTTTGTTTTTGTAAAAGAAAGATTAGTTGCTGAAAATGGAAGTGTGTCCTTATGATTCTGACATAATGTCCTCCGTTTCGTTTGTTTCAGGTCATTTGGTTCTGATGGTGCGCTTCAGTCGCACAGTAAGGCTAAGCACGGGGGTAAGTAAAGGGAACACTGCCATATTTTTTTTCTGCAGCTTCTTCAGTACGTTGCTTTCTAAATAGATTAGAGTCTCGGCTTAAATTTTGTGGTGGGTTGGGATTATAGGA

mRNA sequence

ATGGAGTTCTGGGGTGTTGAGGTTAAGCCTGGTCAGGCACTCTCTGTGAAGCCTGGAGATCAGAAATATCTGCATCTATCACAGGCTACTCTTGGTGAATTAAAGAAGGACAAATCGAAGGAATCCGTGACTATTTTTTTGAAGATTGATGAACAGAAGCTTGTTCTGGGAATTCTCTCTGCAGAGAAGTTCCCTCAGCTATCATTTGATCTCGTGTTCGAGAAGGAATTTGAGCTCTCACACAACGGGAAGAGTGGAAGTATTTACTATTCTGATTTTGGCTCAGAGGACGAGGAACTTGCTCTGCAACATGTGCCGAATGGTAATTGCATTCGGTCGTGTAAATATAATAGGAGCTTGGTTACTAGAAATATTCTTGGCACTGCCTCCTTATCTCGTGATGATCTACTTTCAGGAAAACCTATCCAGAAGGAGGAGAAGTCTATTGTCGAATCGAACAAGAAGAGGTCGAATGACTCTGCCTCGGTGACCCCTGTTTCTAAGAAGTCCAAGCTAGCTTCGGCTGAGAAGTCCGATGCTAAAAAGGGCGGCCATACAGCCACTCCCCACCCTGCTAAGAAACCTCTGAAAACCCCAGCCAAAGCAGCCACTCCAAAATCCGGTGGCCAGTTCTCTTGCAAATCATGCGACAGGTCCTTCGGTTCGGACGGTGCCCTTCAGTCGCACGGTAAAGCAAAGCACAGTGGTGGTGTTGAAGTCAAGCCTGGTCAGGCACTCGTTGTGAAGCCTGGAATTCAGCAGTACCTGCATCTATCACAGGCGACTCTAGGTGAAACAAAGAAGGACAAAGCAAATGAAAACGTGACCATCTTCTTGAAGATTGGTGGCCAAAAGCTTGTTCTTGGCATTCTCTCCTCAGAGAAGTTTCCCCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCCCATAATGGGAAGGGTGGAAGTGTTTACTGTGCTGGATACCAGGCTTATGCCGAGGATCAAGATCCATATCCTTTCTTTCCTTTTTGAGGATTTATATTTCCCCTTAGATTAACGATAATAAGCTTATGTATTATTTGAAGATTATATTTGTTAGTGTCTCATGGCCGGCCTTAAAGTTTATAGTAGTTCGTATAGGTGATCAAAAGATTTGATGTATGCATATTTTTATTAATTAGCTTAATTAGAATTTTTGAAGCTGATGCTACTTCATATGATGGGATTGAGTTTTTTTTTTCCTTGACCACTTCCTGTTCTCTCTTTTCCACTGGCGATTATTTTGGTAAGTTGTTTCGCATTCATAAGATTTGTACCTCGACACATGTCTATTGAGGAAGATTAACTTAGAGTGTGTTGTATCTATTCAGATTCTGATTCTGGCTCGGAGGATGAAGAACTTGAATTGCCCCTTGCTCAAAACGGGAAAGCTACCCAGAAGGAGAAGGCTATTGCCGATAAAAGTAATGCTGCAAAGGCTCTGTCTTTAAAGAAGTCAGATGCAAAGCCTTCGAAACCAAGCAAGGATGAAGATGACTCTGAGGATGACGATGACTCTGACGAAGATGAAGATTTTGATGATGAATCGGATGAGGAAATGCTCAATGCTGACAGTAGCGAATCTGATGATGAAGATGATGACACTGAAAGTGATGAGGAGACACCGAAGAAGGTTGAAGCAACCAAGAAGAGGCCAAATGAGTCTGCCTCCAAGACGACTCCCCTCCCTGCTAAGAAAGCAAAGTTAGCTTCGCCTGTAAAGACTGATTCAAAGAAGGGGGGCCATACTGCCACTCCCCACCCAACCAAGAAGAACGCTAAAACTCCTGCCAAATCAGAGACCCCAAAATCTGGTGGGCAGTTCTCTTGCAAATCCTGCGACAGGTCATTTGGTTCTGATGGTGCGCTTCAGTCGCACAGTAAGGCTAAGCACGGGGGTAAGTAAAGGGAACACTGCCATATTTTTTTTCTGCAGCTTCTTCAGTACGTTGCTTTCTAAATAGATTAGAGTCTCGGCTTAAATTTTGTGGTGGGTTGGGATTATAGGA

Coding sequence (CDS)

ATGGAGTTCTGGGGTGTTGAGGTTAAGCCTGGTCAGGCACTCTCTGTGAAGCCTGGAGATCAGAAATATCTGCATCTATCACAGGCTACTCTTGGTGAATTAAAGAAGGACAAATCGAAGGAATCCGTGACTATTTTTTTGAAGATTGATGAACAGAAGCTTGTTCTGGGAATTCTCTCTGCAGAGAAGTTCCCTCAGCTATCATTTGATCTCGTGTTCGAGAAGGAATTTGAGCTCTCACACAACGGGAAGAGTGGAAGTATTTACTATTCTGATTTTGGCTCAGAGGACGAGGAACTTGCTCTGCAACATGTGCCGAATGGTAATTGCATTCGGTCGTGTAAATATAATAGGAGCTTGGTTACTAGAAATATTCTTGGCACTGCCTCCTTATCTCGTGATGATCTACTTTCAGGAAAACCTATCCAGAAGGAGGAGAAGTCTATTGTCGAATCGAACAAGAAGAGGTCGAATGACTCTGCCTCGGTGACCCCTGTTTCTAAGAAGTCCAAGCTAGCTTCGGCTGAGAAGTCCGATGCTAAAAAGGGCGGCCATACAGCCACTCCCCACCCTGCTAAGAAACCTCTGAAAACCCCAGCCAAAGCAGCCACTCCAAAATCCGGTGGCCAGTTCTCTTGCAAATCATGCGACAGGTCCTTCGGTTCGGACGGTGCCCTTCAGTCGCACGGTAAAGCAAAGCACAGTGGTGGTGTTGAAGTCAAGCCTGGTCAGGCACTCGTTGTGAAGCCTGGAATTCAGCAGTACCTGCATCTATCACAGGCGACTCTAGGTGAAACAAAGAAGGACAAAGCAAATGAAAACGTGACCATCTTCTTGAAGATTGGTGGCCAAAAGCTTGTTCTTGGCATTCTCTCCTCAGAGAAGTTTCCCCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCCCATAATGGGAAGGGTGGAAGTGTTTACTGTGCTGGATACCAGGCTTATGCCGAGGATCAAGATCCATATCCTTTCTTTCCTTTTTGA

Protein sequence

MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILSAEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFGSEDEELALQHVPNGNCIRSCKYNRSLVTRNILGTASLSRDDLLSGKPIQKEEKSIVESNKKRSNDSASVTPVSKKSKLASAEKSDAKKGGHTATPHPAKKPLKTPAKAATPKSGGQFSCKSCDRSFGSDGALQSHGKAKHSGGVEVKPGQALVVKPGIQQYLHLSQATLGETKKDKANENVTIFLKIGGQKLVLGILSSEKFPQLSFDLVFEKEFELSHNGKGGSVYCAGYQAYAEDQDPYPFFPF

Homology

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BLAST of Cp4.1LG00g09630 vs. Swiss-Prot
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-39
Identity = 115/280 (41.07%), Postives = 152/280 (54.29%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG EVK G+ L+V+PGD   LHLSQA+LGELKKDKS ESV + + ID +KLVLG L+
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESVCLSVNIDGKKLVLGTLN 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY----------------SDFGSEDEELALQH 120
           +EK PQ  FDLVF+++FELSHN KSGS+Y+                 D+   DE++ L  
Sbjct: 61  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTL 120

Query: 121 VPNG-----NCIRSCKYNRSLVTRNILGTASLSRDDLLSGKPIQKEEKSIVESNKKRSND 180
             +G        +S     S   +  +     ++DD         ++ S +  ++  S+D
Sbjct: 121 ANSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDD---EDESSDDDDSDMGEDEDDSDD 180

Query: 181 SASVTPVSKKSKLASAEKSDA----------------------KKGGHTATPHPAKKPLK 238
           S   TP  KK++ A   K+D+                      K GGH ATPHP+K+  K
Sbjct: 181 SEEETP--KKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASK 240

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BLAST of Cp4.1LG00g09630 vs. Swiss-Prot
Match: HDT1_ARATH (Histone deacetylase HDT1 OS=Arabidopsis thaliana GN=HDT1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.9e-30
Identity = 97/257 (37.74%), Postives = 140/257 (54.47%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG+EVK G+ ++V P +   +H+SQA+LGE K  K  E V + +K+  Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKG-EFVPLHVKVGNQNLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFG---------SEDEELALQHVPNGNCI 120
            E  PQL  DLVF+KEFELSH    GS+Y+  +          SE+EE   + VP GN  
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAA 120

Query: 121 RSCKYNRSLVT---------RNILGTASLSRDDLLSGKPIQKEEKSIVE--SNKKRSNDS 180
           ++    ++             +   +  +  DD   G+  ++EE +  +  S+KKR+N++
Sbjct: 121 KAVAKPKAKPAEVKPAVDDEEDESDSDGMDEDD-SDGEDSEEEEPTPKKPASSKKRANET 180

Query: 181 ASVTPVS-KKSKLA-SAEKSDAKKGGHTATPHPAKKPLKTPAKAATPKSGGQFSCKSCDR 236
               PVS KK+K+A + +K+D KK G  A                +PKS  Q SC SC +
Sbjct: 181 TPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQ-------------SPKSASQVSCGSCKK 240

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BLAST of Cp4.1LG00g09630 vs. Swiss-Prot
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.9e-26
Identity = 103/296 (34.80%), Postives = 136/296 (45.95%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGD--QKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGI 60
           MEFWGVEVK GQ ++V P D    Y+H+SQ  LGE KKDK  E V ++LK+ EQK+VLG 
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 61  LSAEKFPQLSFDLVFEKEFELSHNGKSGSIY---------------YSDFGSEDEELALQ 120
           LS +  P LS DLV + + ELSH  KS S++               +SD   EDEELAL+
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALE 120

Query: 121 HVPNGNCIRSCKYNRSLVTRNILGTASLSRDDLLSGKPIQKEEKSIVESNKKRSNDSASV 180
              NG      K   + VT+       +      +     +++ S  ES+   + +  S 
Sbjct: 121 GQDNGK--PELKAEGAKVTKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLAGEDESG 180

Query: 181 TPVSKKSKLASAEKSDA--------------KKGGHTA--TPHPAKK-----PLKTPAK- 237
           +         S E+SD               K+   +A  TP  AKK     P KT  K 
Sbjct: 181 SSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKK 240

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BLAST of Cp4.1LG00g09630 vs. Swiss-Prot
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-24
Identity = 100/305 (32.79%), Postives = 139/305 (45.57%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG+EVKPG  +  +PG    LH+SQA LGE KK    +S  +++K+D++KL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKS---DSALMYVKVDDKKLAIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYS-------------DFGSEDEELALQ-HVP 120
            +K+PQ+ FDLVF KEFELSH  K+ S+++S             D  SEDEE  L   V 
Sbjct: 61  IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPVI 120

Query: 121 NGNCIRSCKYNRSLVTRNILGTASLSRDDLLSGKPIQKEEKSIVESNKKRSNDS------ 180
             N     K  +    + +  TAS S   L        ++    ES+    +DS      
Sbjct: 121 KENGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDEDDSDDSDEG 180

Query: 181 ASVTPVSKKSKLASAEKSDAKKGGHTATPHP----------AKKPLKTP-----AKAATP 235
             ++P   +    S+++ D        TP P          A+  LKTP     AK ATP
Sbjct: 181 EGLSP--DEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALKTPLSDKKAKVATP 240

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BLAST of Cp4.1LG00g09630 vs. Swiss-Prot
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.8e-20
Identity = 88/292 (30.14%), Postives = 131/292 (44.86%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK G+ L + PG  + +H+SQ  LGE K + + E + +++ +   KL++G LS
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVT-EPIQLYVTVGSDKLLIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFGSE----------DEELALQHVPNGNC 120
            EKFPQLS ++V E+ F LSH  K+GS+++S +  +          D++L          
Sbjct: 61  HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQLEAAGFKAAPK 120

Query: 121 IRSCKYNRSLVTRNIL---------GTASLSRDDLLSGKPIQKEEKSIVESNKKRSN--- 180
             + + N  L   ++               S DD       ++EEK   ES+ +  +   
Sbjct: 121 SAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAESDSEEDDSSD 180

Query: 181 ---DSASVTPVSKKSKLASAEKSDAKKGGHTATPHPAK--KPLKT-------------PA 236
              D +S     KK +      ++     + A+   AK   P KT             P+
Sbjct: 181 DEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPS 240

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BLAST of Cp4.1LG00g09630 vs. TrEMBL
Match: A0A0V0HRY4_SOLCH (Putative histone deacetylase HDT1-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 125/286 (43.71%), Postives = 163/286 (56.99%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG EVK GQ LSV+PGD   LHLSQA+LGE+KKDK  E V + + ID +KLVLG LS
Sbjct: 1   MEFWGAEVKSGQPLSVQPGDDMILHLSQASLGEVKKDKGSEPVCLSVTIDGKKLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY----------------SDFGSEDEELALQH 120
           ++K PQ  FDLVF+++FELSHN K+GS+Y+                 D    DEE+ L  
Sbjct: 61  SDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPFEDEEDVDEDEDESDEEIPLTI 120

Query: 121 VPNGNC--------IRSCKYNRSLVTRNILGTA---------SLSRDDLLSGKPIQ---K 180
             NG            S K    +V  + +  A         S   DD + G+  +    
Sbjct: 121 ANNGKTEAKAIAKDSASAKQKVRVVEFSKVAKAEDGDESTDESADEDDSMMGEDEEGDSD 180

Query: 181 EEKSI---------VESNKKRSNDSASVTPV-SKKSKLASAEKSDAKKGG-HTATPHPAK 238
           E++S           E ++KR  DSA+ TPV  KK+K  + +K+D KKG  H ATPHP+K
Sbjct: 181 EDQSDESEEGTPKKAEPSRKRPADSAAKTPVPDKKTKFLTPQKTDGKKGAVHVATPHPSK 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TrEMBL
Match: M1AFH0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008398 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.3e-44
Identity = 126/286 (44.06%), Postives = 163/286 (56.99%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG EVK GQ LSV+PGD   LHLSQA+LGE+KKDK  E V + + ID +KLVLG LS
Sbjct: 1   MEFWGAEVKSGQPLSVQPGDDMILHLSQASLGEVKKDKGSEPVCLSVTIDGKKLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY----------------SDFGSEDEELALQH 120
           ++K PQ  FDLVF+++FELSHN K+GSIY+                 D    DEE+ L  
Sbjct: 61  SDKLPQQQFDLVFDRDFELSHNWKNGSIYFFGYKAANPFEDEEDVDEDEDESDEEIPLTI 120

Query: 121 VPNGNC--------IRSCKYNRSLVTRNILGTA---------SLSRDDLLSGKPIQ---K 180
             NG            S K    +V  + +  A         S   DD + G+  +    
Sbjct: 121 ANNGKTEAKAIAKDSASTKQKVRVVEFSKVAKAEDGDESTDESADEDDSMMGEDEEGDSD 180

Query: 181 EEKSI---------VESNKKRSNDSASVTPV-SKKSKLASAEKSDAKKGG-HTATPHPAK 238
           E++S           E ++KR  DSA+ TPV  KK+K  + +K+D KKG  H ATPHP+K
Sbjct: 181 EDQSDESEEGTPKKAEPSRKRPADSAAKTPVPDKKTKFLTPQKTDGKKGAVHVATPHPSK 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TrEMBL
Match: M5VZI1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009583mg PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 125/286 (43.71%), Postives = 163/286 (56.99%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK G+ +   P D K +HLSQA LGE KK   +  +++  KID++K VLG LS
Sbjct: 1   MEFWGVEVKAGEPVKYVPVDGKVVHLSQACLGETKKGADQGVISV--KIDDKKFVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY--------------SDFGSEDEELALQHVP 120
           ++KFPQL  DLVFEKEFELSHN KSGS+++              S+F S DE++ ++   
Sbjct: 61  SDKFPQLFLDLVFEKEFELSHNLKSGSVHFCGYQTLIGEDEEGDSEFDSSDEDVPMEITQ 120

Query: 121 NG-------NCIRSCKYNRSLV-----------------TRNILGTASLSRD-------D 180
           NG       N ++     +  V                 + + LG    S D       D
Sbjct: 121 NGMPAPSKTNTVKPEASEKQKVKIEEPSNDDDDDSDDSSSEDGLGGFEDSSDEDDDSDED 180

Query: 181 LLSGKPIQKEEKSIVESNKKRSNDSASVTPV-SKKSKLASAEKSDAKKGGHTATPHPAKK 236
             +     +E  +  +++KKR N+SAS TPV +KK+K  + +K+D KK  HTATPHPAKK
Sbjct: 181 DDATDEDDEETPTPKKASKKRPNESASKTPVPAKKAKQVTPQKTDGKKAAHTATPHPAKK 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TrEMBL
Match: A0A0D3GBQ0_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39
Identity = 111/251 (44.22%), Postives = 150/251 (59.76%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG+EVKPGQ +  +P D+++LHLSQA LGE KK    ++  +++K D+QKLV+G LS
Sbjct: 1   MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKK--GSDNAVMYVKTDDQKLVIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFGSEDEELALQHVPNGNCIRSCKYNRSL 120
           A+KFPQ+ FDLVF+KEFELSH  K+         +E+EE  +   P  N     K N   
Sbjct: 61  ADKFPQIQFDLVFDKEFELSHTSKT--------ANEEEEEKIIPAPRANGKVEGKENEQK 120

Query: 121 VTRNILGTASLSR---------DDLLSGKPIQKEEKSIVESNKKRSNDSASVTPVS-KKS 180
                  +AS S+         DD    +  ++E     E+ K++  +    TP S KK+
Sbjct: 121 KQGKTDSSASKSKAAVNDDDDDDDNDEDESDEEETPKKPETGKRKVAEIVLKTPSSDKKA 180

Query: 181 KLA--SAEKSDAKKGGHTATPHPAKKPLKTP----AKAATPKS-GGQFSCKSCDRSFGSD 235
           K+A  S +K+  KKG H ATPHPAK+  KTP    +K  +PKS GG  SCKSC ++F S+
Sbjct: 181 KIATPSGQKTGDKKGVHVATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKTFNSE 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TrEMBL
Match: I1LKW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G189500 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 117/284 (41.20%), Postives = 154/284 (54.23%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGD--QKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGI 60
           MEFWGVEVK GQ ++V P D    Y+H+SQ  LGE KK+K  ESV ++LK+ EQK+VLG 
Sbjct: 5   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKEKPNESVVLYLKVGEQKIVLGT 64

Query: 61  LSAEKFPQLSFDLVFEKEFELSHNGKSGSIYY------------SDFGS--EDEELALQH 120
           LS +  P LS DLV + + ELSH  KS S+++            SDF    EDEELAL+ 
Sbjct: 65  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYRVLTGGNNASDFSDSEEDEELALEG 124

Query: 121 VPN----------------GNCIRSCKYNRS------------LVTRNILGTASLSRDDL 180
             N                G   ++    +             L   +  G++    DD 
Sbjct: 125 QDNDEGAKVTKPSKPVPKIGAPAKTADPKKDEGDDSDDESDDDLAGEDEFGSSDEMDDDS 184

Query: 181 LSGKPIQKEEKSI-VESNKKRSNDSASVTPVS-KKSKLASAEKSDAKKGGHTATPHPAKK 237
            S +   +E  +  V+  KKR N+SA+ TPVS KK+K A+ EK++ KK  H ATPHP+KK
Sbjct: 185 DSDEESDEETPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKNVHVATPHPSKK 244

[Close]

BLAST of Cp4.1LG00g09630 vs. TAIR10
Match: AT3G44750.1 (AT3G44750.1 histone deacetylase 3)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-31
Identity = 97/257 (37.74%), Postives = 140/257 (54.47%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWG+EVK G+ ++V P +   +H+SQA+LGE K  K  E V + +K+  Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKG-EFVPLHVKVGNQNLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFG---------SEDEELALQHVPNGNCI 120
            E  PQL  DLVF+KEFELSH    GS+Y+  +          SE+EE   + VP GN  
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAA 120

Query: 121 RSCKYNRSLVT---------RNILGTASLSRDDLLSGKPIQKEEKSIVE--SNKKRSNDS 180
           ++    ++             +   +  +  DD   G+  ++EE +  +  S+KKR+N++
Sbjct: 121 KAVAKPKAKPAEVKPAVDDEEDESDSDGMDEDD-SDGEDSEEEEPTPKKPASSKKRANET 180

Query: 181 ASVTPVS-KKSKLA-SAEKSDAKKGGHTATPHPAKKPLKTPAKAATPKSGGQFSCKSCDR 236
               PVS KK+K+A + +K+D KK G  A                +PKS  Q SC SC +
Sbjct: 181 TPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQ-------------SPKSASQVSCGSCKK 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TAIR10
Match: AT5G03740.1 (AT5G03740.1 histone deacetylase 2C)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21
Identity = 88/292 (30.14%), Postives = 131/292 (44.86%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK G+ L + PG  + +H+SQ  LGE K + + E + +++ +   KL++G LS
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVT-EPIQLYVTVGSDKLLIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYYSDFGSE----------DEELALQHVPNGNC 120
            EKFPQLS ++V E+ F LSH  K+GS+++S +  +          D++L          
Sbjct: 61  HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQLEAAGFKAAPK 120

Query: 121 IRSCKYNRSLVTRNIL---------GTASLSRDDLLSGKPIQKEEKSIVESNKKRSN--- 180
             + + N  L   ++               S DD       ++EEK   ES+ +  +   
Sbjct: 121 SAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAESDSEEDDSSD 180

Query: 181 ---DSASVTPVSKKSKLASAEKSDAKKGGHTATPHPAK--KPLKT-------------PA 236
              D +S     KK +      ++     + A+   AK   P KT             P+
Sbjct: 181 DEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPS 240

[Close]

BLAST of Cp4.1LG00g09630 vs. TAIR10
Match: AT5G22650.1 (AT5G22650.1 histone deacetylase 2B)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18
Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1


Query: 237 GVEVKPGQALVVKPGIQQYLHLSQATLGETKKDKANENVTIFLKIGGQKLVLGILSSEKF 296
           GV V P  A  V P     +H+SQA+L  T K  + E+V + + +GG KLV+G LS +KF
Sbjct: 5   GVAVTPKNATKVTPEEDSLVHISQASLDCTVK--SGESVVLSVTVGGAKLVIGTLSQDKF 64

Query: 297 PQLSFDLVFEKEFELSHNGKGGSVYCAGYQAYAEDQDPY 336
           PQ+SFDLVF+KEFELSH+G   +V+  GY++   +QD +
Sbjct: 65  PQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDF 101

[Close]

BLAST of Cp4.1LG00g09630 vs. TAIR10
Match: AT2G27840.1 (AT2G27840.1 histone deacetylase-related / HD-related)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-15
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKI--DEQKLVLGI 60
           MEFWG+E+KPG+   V   D   +H SQ TLG+++K K  E+  +++KI  DE   ++G 
Sbjct: 1   MEFWGIEIKPGKPFKVIQKDGFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGN 60

Query: 61  LSAEKFPQLSFDLVFEKEFELSHNGKSGSIY---YSDFGSEDE 99
           LS +KFPQ S DL    EFE+SHN  S S+Y   Y  F + DE
Sbjct: 61  LS-QKFPQFSIDLYLGHEFEISHNSTS-SVYLIGYRTFDAFDE 101

[Close]

BLAST of Cp4.1LG00g09630 vs. NCBI nr
Match: gi|659117491|ref|XP_008458629.1| (PREDICTED: histone deacetylase HDT1-like [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 2.6e-58
Identity = 157/293 (53.58%), Postives = 177/293 (60.41%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK GQ+L VKPG++K +HLSQATLGE+KKDK+ E+VTIFLKI +QKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY-----------------SDFGSEDEELALQ 120
           AEKFPQLSFDLVFEKEFELSHNGKSGS+Y                  SD GS+DEEL L 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEHDGYLDSDAGSDDEELPLA 120

Query: 121 HVPNGNCIRSCKYNRSLVTRNILGTASLSR--------DDLLSGKPIQKEEKSIVESNK- 180
              NG    S      LV  N    ASL +        DD+        +E S  ES++ 
Sbjct: 121 SAQNGK-PSSKDVKPGLVESNNAKKASLKKPLKPSKDEDDVSEDDESDDDEDSDDESDEE 180

Query: 181 ----------KRSNDSASVTPVSKKSKLA------SAEK----------------SDAKK 235
                     +  +DS S     KK + A      SA K                +D+KK
Sbjct: 181 MLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKK 240

[Close]

BLAST of Cp4.1LG00g09630 vs. NCBI nr
Match: gi|449456084|ref|XP_004145780.1| (PREDICTED: histone deacetylase HDT1 isoform X2 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 4.4e-58
Identity = 152/293 (51.88%), Postives = 173/293 (59.04%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK GQ+L VKPG++K +HLSQATLGE+KK+K+ E+VTIFLKI +QKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY-----------------SDFGSEDEELALQ 120
            EKFPQLSFDLVFEKEFELSHNGKSGS+Y                  SD  SEDEEL L 
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEQDGYLDSDSASEDEELPLV 120

Query: 121 HVPNGNCIRSCKYNRSLVTRNILGTASL-------------SRDDLLSGKPIQKEE--KS 180
             PNG           LV  N    ASL             S DD   G     +E  + 
Sbjct: 121 SAPNGKPSPK-GVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDEE 180

Query: 181 IVESNKKRSNDSASVTPVSKKSKLASAE------------------------KSDAKKGG 237
           +++ +     D  S +      K+ SA+                        K+D+KKGG
Sbjct: 181 MLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKGG 240

[Close]

BLAST of Cp4.1LG00g09630 vs. NCBI nr
Match: gi|778713493|ref|XP_011657054.1| (PREDICTED: histone deacetylase HDT1 isoform X1 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 5.8e-58
Identity = 152/294 (51.70%), Postives = 173/294 (58.84%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK GQ+L VKPG++K +HLSQATLGE+KK+K+ E+VTIFLKI +QKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIYY------------------SDFGSEDEELAL 120
            EKFPQLSFDLVFEKEFELSHNGKSGS+Y                   SD  SEDEEL L
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVYCAGYQAYGDDHEHTDGYLDSDSASEDEELPL 120

Query: 121 QHVPNGNCIRSCKYNRSLVTRNILGTASL-------------SRDDLLSGKPIQKEE--K 180
              PNG           LV  N    ASL             S DD   G     +E  +
Sbjct: 121 VSAPNGKPSPK-GVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDE 180

Query: 181 SIVESNKKRSNDSASVTPVSKKSKLASAE------------------------KSDAKKG 237
            +++ +     D  S +      K+ SA+                        K+D+KKG
Sbjct: 181 EMLDGDNSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSKKG 240

[Close]

BLAST of Cp4.1LG00g09630 vs. NCBI nr
Match: gi|729327970|ref|XP_010535666.1| (PREDICTED: histone deacetylase HDT1-like isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 129/284 (45.42%), Postives = 160/284 (56.34%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK G+ L VKP +   +H+SQA+LGE K  K  ESV +F+K+ +QKLV+G LS
Sbjct: 1   MEFWGVEVKAGKTLKVKPEEDALIHISQASLGESKDKKGGESVPLFVKVGDQKLVMGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIY-----------------YSDFGSEDEELALQ 120
            E FPQ+S DLVFEKEFELSHN K+GS+Y                 YSD    DEE+   
Sbjct: 61  QENFPQISCDLVFEKEFELSHNWKNGSVYFIGYKSPNIEGQDEEGFYSDSEESDEEIPAT 120

Query: 121 HVPNGN----------------CIRSCKYNRSLVTRNILGTASLSRDDLLSGKPI----- 180
              NG                      K ++ L + +         D    G  I     
Sbjct: 121 MTENGKPGAAVENAKAEAKPKAIAAEGKKDKKLASEDDDSDEDGESDSEEEGMGIDDSDD 180

Query: 181 --------QKEEKSIVESNKKRSNDSASVTPV-SKKSKLASA-EKSDAKKGGHTATPHPA 236
                   ++E     E +KKR N+SAS TPV +KK+K A+  +K++ KKGGHTATPHPA
Sbjct: 181 SDDDSEDEEEETPKKAEPSKKRGNESASKTPVPAKKAKAAATPQKTEEKKGGHTATPHPA 240

[Close]

BLAST of Cp4.1LG00g09630 vs. NCBI nr
Match: gi|729327967|ref|XP_010535665.1| (PREDICTED: histone deacetylase HDT1-like isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 197.2 bits (500), Expect = 4.6e-47
Identity = 129/285 (45.26%), Postives = 162/285 (56.84%), Query Frame = 1


Query: 1   MEFWGVEVKPGQALSVKPGDQKYLHLSQATLGELKKDKSKESVTIFLKIDEQKLVLGILS 60
           MEFWGVEVK G+ L VKP +   +H+SQA+LGE K  K  ESV +F+K+ +QKLV+G LS
Sbjct: 1   MEFWGVEVKAGKTLKVKPEEDALIHISQASLGESKDKKGGESVPLFVKVGDQKLVMGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSIY-----------------YSDFGSEDEELALQ 120
            E FPQ+S DLVFEKEFELSHN K+GS+Y                 YSD    DEE+   
Sbjct: 61  QENFPQISCDLVFEKEFELSHNWKNGSVYFIGYKSPNIEGQDEEGFYSDSEESDEEIPAT 120

Query: 121 HVPNGNCIRSCKYNRSLVTRNILGT--------ASLSRDDLLSGKPIQKEEKSI------ 180
              NG    + +  ++      +          AS   D    G+   +EE  +      
Sbjct: 121 MTENGKPGAAVENAKAEAKPKAIAAEGKKDKKLASEDDDSDEDGESDSEEEGQMGIDDSD 180

Query: 181 ----------------VESNKKRSNDSASVTPV-SKKSKLASA-EKSDAKKGGHTATPHP 236
                            E +KKR N+SAS TPV +KK+K A+  +K++ KKGGHTATPHP
Sbjct: 181 DSDDDSEDEEEETPKKAEPSKKRGNESASKTPVPAKKAKAAATPQKTEEKKGGHTATPHP 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g09630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HDT1_SOLCH	1.2e-39	41.07	Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1	[more]
HDT1_ARATH	3.9e-30	37.74	Histone deacetylase HDT1 OS=Arabidopsis thaliana GN=HDT1 PE=1 SV=1	[more]
HDT1_SOYBN	5.9e-26	34.80	Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1	[more]
HDT2_MAIZE	2.5e-24	32.79	Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1	[more]
HDT3_ARATH	2.8e-20	30.14	Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2	[more]

BLAST of Cp4.1LG00g09630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0V0HRY4_SOLCH	2.0e-44	43.71	Putative histone deacetylase HDT1-like OS=Solanum chacoense PE=4 SV=1	[more]
M1AFH0_SOLTU	4.3e-44	44.06	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008398 PE=4 SV=1	[more]
M5VZI1_PRUPE	1.8e-42	43.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009583mg PE=4 SV=1	[more]
A0A0D3GBQ0_9ORYZ	5.5e-39	44.22	Uncharacterized protein OS=Oryza barthii PE=4 SV=1	[more]
I1LKW2_SOYBN	2.7e-38	41.20	Uncharacterized protein OS=Glycine max GN=GLYMA_11G189500 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g09630 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44750.1	2.2e-31	37.74	histone deacetylase 3	[more]
AT5G03740.1	1.6e-21	30.14	histone deacetylase 2C	[more]
AT5G22650.1	2.8e-18	47.47	histone deacetylase 2B	[more]
AT2G27840.1	1.0e-15	45.63	histone deacetylase-related / HD-related	[more]

BLAST of Cp4.1LG00g09630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117491\|ref\|XP_008458629.1\|	2.6e-58	53.58	PREDICTED: histone deacetylase HDT1-like [Cucumis melo]	[more]
gi\|449456084\|ref\|XP_004145780.1\|	4.4e-58	51.88	PREDICTED: histone deacetylase HDT1 isoform X2 [Cucumis sativus]	[more]
gi\|778713493\|ref\|XP_011657054.1\|	5.8e-58	51.70	PREDICTED: histone deacetylase HDT1 isoform X1 [Cucumis sativus]	[more]
gi\|729327970\|ref\|XP_010535666.1\|	3.5e-47	45.42	PREDICTED: histone deacetylase HDT1-like isoform X2 [Tarenaya hassleriana]	[more]
gi\|729327967\|ref\|XP_010535665.1\|	4.6e-47	45.26	PREDICTED: histone deacetylase HDT1-like isoform X1 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g09630.1	Cp4.1LG00g09630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 213..234 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 211..239 score: 11
None	No IPR available	PANTHER	PTHR31802	FAMILY NOT NAMED	coord: 1..235 score: 1.5
None	No IPR available	PANTHER	PTHR31802:SF5	HISTONE DEACETYLASE HDT2-RELATED	coord: 1..235 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g09630	Cucumber (Chinese Long) v3	cpecucB0010