Cp4.1LG00g09290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g09290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG00 : 29000157 .. 29001521 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTATTAAAAGTATTTAGCAGTTGAATGTGAAGGTGTAAAGCGTAAACTCCCTCCACTTCCTCATTGCTTTGTCTTCTTCTTCTTCTTCGTCTTCTTTGCATTTAAGATCCTCACGACTCGCGTGTTTTAGCTTCGAATTTCGACCCCTTATGGGGCTCCGAGATTAATTAACAACAGAGAGGTGGAATTCATCTGAACCTTTCAAGAAACTCACGAGATTTCCATGGCCGAAGGTAATCCTATCCCCCCCCAACGGCTTTCAGTTGTTTTATTCTGTTCTGTTTTTAATTTTGTTCTGAGAAATTTGTTCGAATCGGAATCGGAATCGGAAAATATGAGTCTTCTCAGAGTGATTTTGCAGGAAGCAGCCAGGCGAGAGACGGAAGCTAGGACGATTTGGGGATTTTTGAGCGACCAAATGGACGGTGTCGATGGAGGAGGGAGGCGGCGGCGGCAGAGTTTAAAGCAACGTCTAGGGTTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTCCCGGCCGGCGACAGGAAGCGTCAGAGGCGGCGGCGGCGGCGACGACGACGACGACGATAACGATGACCAGAGAGTACCGGAGACAGAGGTGACGAATCCGCGCCGATTTCAGGAGGAGAGGCAGTTGGATCGGAGTTTTATGAGTCCGTTATCCGTTCCGTCGCCGGCGACGTCTGGGATGAACTTAGCCACGGCTCTGGCGGCGGAGCGTCGTTTAAGAGCGTCACCGCGTGGAGCGGAGGGGGGATTTTTGGAATCTAGTAACAACGATTTTGATTCACTGGGCGGAATGATGGTAACGGAGACGCCGTTGAAGGTGTCGCTTATACGGCTGCTGAACGAAACAGACGGTAGCGATGGCGGTCGTGGGAGTTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCGGGAAATGATTCGATGTGTTGCGTATGCATGGGGAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAATCGAGGATTTTGTCCGCTCTGCAACCGTCCGATCATGGAGATTCTTGATATATTTTGAAGGAGCACGATGCGTGCGATGAAGATAAGCGCAGACGATAGTTGGGTACCGGAAGGAGAAGTGGTTGCCTCAAAATTTCGAGACAGACTGTTTTGATTGGACGATACTGAACGTTGGCCGTATCTGGACGACACGTGGATGCTATGCGGGTGACCGAACTTTTTTACTGACGGGAAAAAGTTAAATCAACAAATTCGATGTAATTCATAAATTTAAACTTTTTATGTACATGGGATTTAACAACAACTACTACTTCCATGGTTGCATTTTTT

mRNA sequence

ATGAAAGAAGCAGCCAGGCGAGAGACGGAAGCTAGGACGATTTGGGGATTTTTGAGCGACCAAATGGACGGTGTCGATGGAGGAGGGAGGCGGCGGCGGCAGAGTTTAAAGCAACGTCTAGGGTTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTCCCGGCCGGCGACAGGAAGCGTCAGAGGCGGCGGCGGCGGCGACGACGACGACGACGATAACGATGACCAGAGAGTACCGGAGACAGAGGTGACGAATCCGCGCCGATTTCAGGAGGAGAGGCAGTTGGATCGGAGTTTTATGAGTCCGTTATCCGTTCCGTCGCCGGCGACGTCTGGGATGAACTTAGCCACGGCTCTGGCGGCGGAGCGTCGTTTAAGAGCGTCACCGCGTGGAGCGGAGGGGGGATTTTTGGAATCTAGTAACAACGATTTTGATTCACTGGGCGGAATGATGGTAACGGAGACGCCGTTGAAGGTGTCGCTTATACGGCTGCTGAACGAAACAGACGGTAGCGATGGCGGTCGTGGGAGTTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCGGGAAATGATTCGATGTGTTGCGTATGCATGGGGAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAATCGAGGATTTTGTCCGCTCTGCAACCGTCCGATCATGGAGATTCTTGATATATTTTGAAGGAGCACGATGCGTGCGATGAAGATAAGCGCAGACGATAGTTGGGTACCGGAAGGAGAAGTGGTTGCCTCAAAATTTCGAGACAGACTGTTTTGATTGGACGATACTGAACGTTGGCCGTATCTGGACGACACGTGGATGCTATGCGGGTGACCGAACTTTTTTACTGACGGGAAAAAGTTAAATCAACAAATTCGATGTAATTCATAAATTTAAACTTTTTATGTACATGGGATTTAACAACAACTACTACTTCCATGGTTGCATTTTTT

Coding sequence (CDS)

ATGAAAGAAGCAGCCAGGCGAGAGACGGAAGCTAGGACGATTTGGGGATTTTTGAGCGACCAAATGGACGGTGTCGATGGAGGAGGGAGGCGGCGGCGGCAGAGTTTAAAGCAACGTCTAGGGTTTAAGGTTATGGGCTGTTGTGGTGCTACTTGGGGTTCCCGGCCGGCGACAGGAAGCGTCAGAGGCGGCGGCGGCGGCGACGACGACGACGACGATAACGATGACCAGAGAGTACCGGAGACAGAGGTGACGAATCCGCGCCGATTTCAGGAGGAGAGGCAGTTGGATCGGAGTTTTATGAGTCCGTTATCCGTTCCGTCGCCGGCGACGTCTGGGATGAACTTAGCCACGGCTCTGGCGGCGGAGCGTCGTTTAAGAGCGTCACCGCGTGGAGCGGAGGGGGGATTTTTGGAATCTAGTAACAACGATTTTGATTCACTGGGCGGAATGATGGTAACGGAGACGCCGTTGAAGGTGTCGCTTATACGGCTGCTGAACGAAACAGACGGTAGCGATGGCGGTCGTGGGAGTTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCGGGAAATGATTCGATGTGTTGCGTATGCATGGGGAGGAAAAAGGGAGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGGGAGCTGTGGTTAAATCGAGGATTTTGTCCGCTCTGCAACCGTCCGATCATGGAGATTCTTGATATATTTTGA

Protein sequence

MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRGSLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIMEILDIF
Homology
[Close]
BLAST of Cp4.1LG00g09290 vs. Swiss-Prot
Match: LUL4_ARATH (Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 1 

Query: 187 EEAGNDSMCCVCMGRKKGAAFIPCGHT-FCRVCSRELWLNRGFCPLCNRPIMEILDI 243
           +E+G+ + C +CM   K  A +PC H   C  C++EL L    CP+C +PI E+L+I
Sbjct: 294 DESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350

[Close]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match: A0A0A0KMY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.7e-98
Identity = 189/245 (77.14%), Postives = 207/245 (84.49%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGS 60
           ++EAARRE EARTIWGFL+DQMDG+DGGGRRR  SLKQRLGFKVMGCCGATWG RP + S
Sbjct: 8   LQEAARREREARTIWGFLTDQMDGIDGGGRRR-PSLKQRLGFKVMGCCGATWGFRPPSDS 67

Query: 61  VRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATAL 120
           VR GGG DDD      +RVP+ EV N RR  EER+L+RS +SPLSV SP  SGMNLATAL
Sbjct: 68  VRDGGGEDDD------RRVPDLEVMNTRR--EERELNRSCLSPLSVQSPGPSGMNLATAL 127

Query: 121 AAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGS--DGGRGS 180
           AAERRLRASPRGAEG  +E +NNDFDS  GMM T TPL+VSL+RLL ETDG   DGG G+
Sbjct: 128 AAERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGN 187

Query: 181 LGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIME 240
           LGVAEKKR+E  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRG CPLCNRPI+E
Sbjct: 188 LGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIE 243

Query: 241 ILDIF 244
           ILDIF
Sbjct: 248 ILDIF 243

[Close]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match: A0A061GHE7_THECC (RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030318 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 125/223 (56.05%), Postives = 143/223 (64.13%), Query Frame = 1 

Query: 22  MDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRGGGGGDDDDDDNDDQRVPE 81
           MDGVD    RRR+S K+RLGFK++GCCGATWG    T SVR          D+D+  V E
Sbjct: 1   MDGVDR--ERRRRSFKERLGFKIVGCCGATWGLGSTTISVR----------DDDEVEVVE 60

Query: 82  TEVTNPRRFQEERQLDRSFMSPLSV-PSPATSGMNLATALAAERRLRASPRGAEGGFLES 141
            E  + +R Q E         P  + PSP +SGMNLA ALAAER  RA+     G    +
Sbjct: 61  EEEADQQREQVEATHSGHNPDPGCINPSPVSSGMNLAAALAAERHFRAAQEPEGGNAAPT 120

Query: 142 SNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRGSLGVAEKKREEAGNDSMCCVCMG 201
           S  D  S  G+    TPL+VSL+RLL E DG  GG    G  EK   E G+DSMCCVCMG
Sbjct: 121 S--DGQSNAGLRSPGTPLRVSLMRLLEEADGFCGG----GEQEKGGVEMGSDSMCCVCMG 180

Query: 202 RKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIMEILDIF 244
           +KKGAAFIPCGHTFCRVCSRELWLNRG CPLCNR I+EILDIF
Sbjct: 181 KKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 205

[Close]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match: W9RJS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 131/251 (52.19%), Postives = 153/251 (60.96%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGS 60
           ++E+ RRE EARTI  FL +QMD  D   R R++SLK+RLG   MGCCGATWG RP T S
Sbjct: 8   LQESVRREREARTILCFLREQMDVADEE-RGRKRSLKERLGLTGMGCCGATWGFRPTTIS 67

Query: 61  VRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSP---LSVPSPATSGMNLA 120
           V        DDD+ ++Q+            QEE  LD +  +P    S P P    MNLA
Sbjct: 68  VL-------DDDEIEEQQQ-----------QEEHHLDPTANNPGPICSDPDPPGPSMNLA 127

Query: 121 TALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRG 180
            ALAAER+LR S     G   + +        G     TP++VSL+RLL ETDG D    
Sbjct: 128 AALAAERQLRTSNDNERGNTGDETTG--SRTRGSTAPGTPMRVSLMRLLEETDGRD---- 187

Query: 181 SLGVAEKKREEAGN-----DSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLC 240
               A  +R  AG      DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLC
Sbjct: 188 ----AMTERSGAGGGVGSCDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGACPLC 229

Query: 241 NRPIMEILDIF 244
           NRPI+EILDIF
Sbjct: 248 NRPILEILDIF 229

[Close]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match: A0A166GZX8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002207 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.0e-52
Identity = 128/248 (51.61%), Postives = 151/248 (60.89%), Query Frame = 1 

Query: 10  EARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRGGGGGDD 69
           E +TI  FL ++MDGVD     RR+SL QRLGFK MGCCGATWG R +  SV      DD
Sbjct: 19  EGKTILEFLKERMDGVDR--LERRKSLAQRLGFKGMGCCGATWGVRDSDISVM-----DD 78

Query: 70  DDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVP-------SPATSGMNLATALAA 129
           DD   D    P   +TN +  Q+   ++   + P+  P       +P  +GMNLA ALAA
Sbjct: 79  DDRSYDFDSGPP--LTNNQTEQQAEDVESGRVDPVVSPDPGCESGAPVVAGMNLADALAA 138

Query: 130 ERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGR------ 189
           ER+ RA   G +G  L  +  D        V +TPL+VSL+RLL ETDG DG        
Sbjct: 139 ERQFRAGDEGEDGSGLSPTRPD-------NVPDTPLRVSLMRLLEETDGGDGEEVEEKGV 198

Query: 190 -GSLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRP 244
            GS G A         DS+CCVCMGRKKG+AFIPCGHTFCRVCSRELWLNRG CPLCNR 
Sbjct: 199 VGSTGSA---------DSVCCVCMGRKKGSAFIPCGHTFCRVCSRELWLNRGTCPLCNRQ 241

[Close]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match: V4W9T1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50
Identity = 124/245 (50.61%), Postives = 154/245 (62.86%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQ--SLKQRLGFKVMGCCGATWGSRPAT 60
           ++E+  RE E  TI   L ++MDGVD   R R +  SLK+RLG K MGCCGATWG RP T
Sbjct: 8   LQESLDRERETITILALLREKMDGVDSIRRERGRGRSLKERLGLKSMGCCGATWGFRPNT 67

Query: 61  GSVRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLAT 120
            ++      D + ++   + + +   T+  + Q + +     MS + + S   SGMNLA 
Sbjct: 68  INL-----SDSEGEEQQQRHLNQERSTSSAQNQPDNETVPVCMSRIPLIS---SGMNLAA 127

Query: 121 ALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRGS 180
           ALAAER LR++  GA        NND +         TPL+VSL+RLL ET+G DG    
Sbjct: 128 ALAAERHLRSAD-GANPAGPTVINNDHNVGPTGTKRGTPLRVSLMRLLAETEGCDG---- 187

Query: 181 LGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIME 240
                   E+AGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNR I+E
Sbjct: 188 -------EEKAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNRSILE 232

Query: 241 ILDIF 244
           ILDIF
Sbjct: 248 ILDIF 232

[Close]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match: AT4G03965.1 (AT4G03965.1 RING/U-box superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 5.6e-45
Identity = 112/246 (45.53%), Postives = 140/246 (56.91%), Query Frame = 1 

Query: 5   ARRET-EARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRG 64
           A+ ET ++ T    L  QMDG+D   RRR+++LK+RLGFK +GCCG TWG R  + +   
Sbjct: 11  AQPETPQSTTFLDLLRLQMDGLDRS-RRRKRTLKERLGFKRIGCCGPTWGLRLTSNT--- 70

Query: 65  GGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATALAAE 124
              G+DDD+  +++ V  ++                      V  P   GMNLATALAAE
Sbjct: 71  ---GEDDDEPFENRLVSGSD---------------------HVTGPLNQGMNLATALAAE 130

Query: 125 RRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNET------DGSDGGRG 184
           R  R     A G                    TPLKVSL+RLL ET      + ++  R 
Sbjct: 131 RNYRTEETEASGSL------------------TPLKVSLMRLLEETAERVVVEENETERV 190

Query: 185 SLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIM 244
           +   +   R    NDS+CCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNRPI+
Sbjct: 191 TASASSTVRG-VNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPII 209

[Close]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match: AT4G22250.1 (AT4G22250.1 RING/U-box superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-39
Identity = 108/246 (43.90%), Postives = 127/246 (51.63%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGS 60
           M E  R  T   T    L  QM G D    RR+++LK+RL FK +GCCG TW  R    +
Sbjct: 13  MTETHRTTT---TFLDLLRRQMSGHDL--TRRKRTLKERLRFKCIGCCGPTWNLRLTNNT 72

Query: 61  VRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATAL 120
                   DD+                    EE Q++   +  L     + +GMNLATAL
Sbjct: 73  TLHSPTSRDDEI-------------------EELQIETGLV--LESDHGSGTGMNLATAL 132

Query: 121 AAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGS---DGGRG 180
            AER  R     AE                     TP +VSL+RLL ET      D G+ 
Sbjct: 133 EAERYNRGESTEAEADM------------------TPRRVSLMRLLEETAEKIVDDDGKE 192

Query: 181 SLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIM 240
           +  +        GNDS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRPI+
Sbjct: 193 TEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPII 214

Query: 241 EILDIF 244
           EILDIF
Sbjct: 253 EILDIF 214

[Close]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match: AT1G62370.1 (AT1G62370.1 RING/U-box superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 8.7e-30
Identity = 94/248 (37.90%), Postives = 126/248 (50.81%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQ--SLKQRLGFKVMGCCGATWGSRPAT 60
           ++E+       RT+   L ++ D ++GG R   +  +LKQRL F  +GCCG     +P T
Sbjct: 8   LRESEDGTRSERTMMMSLLEE-DQINGGDRTMSKWTTLKQRLRFDWVGCCG-----KPLT 67

Query: 61  GSVRGGGGGD--DDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNL 120
             +R        DDDDD ++ +    + ++P    E   L R             S  NL
Sbjct: 68  LRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLTRG------------STRNL 127

Query: 121 ATALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPL-KVSLIRLLNETDGSDGG 180
           A ALA ER                       L  +   ET + KV L+RLL E+DG D  
Sbjct: 128 AEALAEER-----------------------LAHVTEEETAVTKVPLMRLLAESDGCDST 187

Query: 181 RGSLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRP 240
              LG          ND +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG CPLCNR 
Sbjct: 188 TTWLG----------NDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRS 204

Query: 241 IMEILDIF 244
           I ++LD++
Sbjct: 248 IFDVLDLY 204

[Close]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match: AT3G25030.1 (AT3G25030.1 RING/U-box superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-22
Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 1 

Query: 157 PLKVSLIRLLNETDGSDGGRGSLGVAEKK-REEAGNDSMCCVCMGRKKGAAFIPCGHTFC 216
           P ++SL+ LL E +G        G AE++       +  CCVCM R KGAAFIPCGHTFC
Sbjct: 163 PARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFC 222

Query: 217 RVCSRELWLNRGFCPLCNRPIMEILDIF 244
           R+CSRELW+ RG CPLCN  I+E+LD+F
Sbjct: 223 RLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match: AT4G13100.2 (AT4G13100.2 RING/U-box superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 6.7e-22
Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 1 

Query: 148 LGGMMVTET-PLKVSLIRLLNETDGS------------DGGRGSLGVAEKKREEAGNDSM 207
           LG ++  E  P ++SL+ LL + DG             +G  G  G  E        +  
Sbjct: 157 LGTVLAAEREPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELG 216

Query: 208 CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIMEILDIF 244
           CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG CPLCN  I+++LDIF
Sbjct: 217 CCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match: gi|700193867|gb|KGN49071.1| (hypothetical protein Csa_6G512860 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 2.4e-98
Identity = 189/245 (77.14%), Postives = 207/245 (84.49%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGS 60
           ++EAARRE EARTIWGFL+DQMDG+DGGGRRR  SLKQRLGFKVMGCCGATWG RP + S
Sbjct: 8   LQEAARREREARTIWGFLTDQMDGIDGGGRRR-PSLKQRLGFKVMGCCGATWGFRPPSDS 67

Query: 61  VRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATAL 120
           VR GGG DDD      +RVP+ EV N RR  EER+L+RS +SPLSV SP  SGMNLATAL
Sbjct: 68  VRDGGGEDDD------RRVPDLEVMNTRR--EERELNRSCLSPLSVQSPGPSGMNLATAL 127

Query: 121 AAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGS--DGGRGS 180
           AAERRLRASPRGAEG  +E +NNDFDS  GMM T TPL+VSL+RLL ETDG   DGG G+
Sbjct: 128 AAERRLRASPRGAEGDIVEFNNNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGN 187

Query: 181 LGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIME 240
           LGVAEKKR+E  NDSMCCVCMGRKKGAAFIPCGHTFCR+CSRELWLNRG CPLCNRPI+E
Sbjct: 188 LGVAEKKRDETRNDSMCCVCMGRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIE 243

Query: 241 ILDIF 244
           ILDIF
Sbjct: 248 ILDIF 243

[Close]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match: gi|659079058|ref|XP_008440052.1| (PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 2.0e-89
Identity = 175/222 (78.83%), Postives = 187/222 (84.23%), Query Frame = 1 

Query: 22  MDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRGGGGGDDDDDDNDDQRVPE 81
           MDGVDGGGRRR  SLKQRLGFKVMGCCGATWG RP + SVR GGG DDD      +RVP+
Sbjct: 1   MDGVDGGGRRR-PSLKQRLGFKVMGCCGATWGFRPPSVSVRDGGGEDDD------RRVPD 60

Query: 82  TEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATALAAERRLRASPRGAEGGFLESS 141
            EV N RR  EER+LDRS +SPLSV SP  SGMNLATALAAERRLRASPRGAEGG +E +
Sbjct: 61  LEVMNTRR--EERELDRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGGIVEFN 120

Query: 142 NNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRGSLGVAEKKREEAGNDSMCCVCMGR 201
           NNDFDS  GMM T TPL+VSL+RLL ET+G   G G+LGVAEKKREE GNDSMCCVCMGR
Sbjct: 121 NNDFDSAVGMMETGTPLRVSLLRLLEETEGGCDGGGNLGVAEKKREETGNDSMCCVCMGR 180

Query: 202 KKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIMEILDIF 244
           KKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRPI+EILDIF
Sbjct: 181 KKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 213

[Close]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match: gi|778720231|ref|XP_004134982.2| (PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 1.5e-87
Identity = 172/224 (76.79%), Postives = 187/224 (83.48%), Query Frame = 1 

Query: 22  MDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGSVRGGGGGDDDDDDNDDQRVPE 81
           MDG+DGGGRRR  SLKQRLGFKVMGCCGATWG RP + SVR GGG DDD      +RVP+
Sbjct: 1   MDGIDGGGRRR-PSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDD------RRVPD 60

Query: 82  TEVTNPRRFQEERQLDRSFMSPLSVPSPATSGMNLATALAAERRLRASPRGAEGGFLESS 141
            EV N RR  EER+L+RS +SPLSV SP  SGMNLATALAAERRLRASPRGAEG  +E +
Sbjct: 61  LEVMNTRR--EERELNRSCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEFN 120

Query: 142 NNDFDSLGGMMVTETPLKVSLIRLLNETDGS--DGGRGSLGVAEKKREEAGNDSMCCVCM 201
           NNDFDS  GMM T TPL+VSL+RLL ETDG   DGG G+LGVAEKKR+E  NDSMCCVCM
Sbjct: 121 NNDFDSAVGMMETGTPLRVSLLRLLEETDGGCDDGGGGNLGVAEKKRDETRNDSMCCVCM 180

Query: 202 GRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIMEILDIF 244
           GRKKGAAFIPCGHTFCR+CSRELWLNRG CPLCNRPI+EILDIF
Sbjct: 181 GRKKGAAFIPCGHTFCRICSRELWLNRGSCPLCNRPIIEILDIF 215

[Close]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match: gi|1009181356|ref|XP_015872124.1| (PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba])

HSP 1 Score: 226.1 bits (575), Expect = 6.6e-56
Identity = 133/256 (51.95%), Postives = 162/256 (63.28%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGG-RRRRQSLKQRLGFKVMGCCGATWGSRPATG 60
           ++E+ RRE EA TI GFL +QMD VDG    RRR +LK+RLG K MGCCGA WG RP   
Sbjct: 8   LQESVRREREAGTILGFLREQMDDVDGERVGRRRITLKERLGLKGMGCCGAAWGFRPTAI 67

Query: 61  SVRGGGGGDDDDDDNDDQRVPETEVTNPRRFQEERQLDRSFMSPL--------SVPSPAT 120
           SVR     ++DD++   Q+  + +    RR  +E +   +  +P         + P    
Sbjct: 68  SVRDNDDDNEDDEEQHQQQQQQQQQQRQRRQGQETETVNAGQAPTENNTDPSCTDPVNTG 127

Query: 121 SGMNLATALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTET----PLKVSLIRLLN 180
           SGMNLA ALAAER+ RA+    EG    S++N+  S+ G +  ET    PL+VSL+RLL 
Sbjct: 128 SGMNLAAALAAERQFRATNE-TEGVSAGSTSNNNRSVSGSVAAETAPGTPLRVSLMRLLE 187

Query: 181 ETDGSDGGRGSLGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG 240
           ETDG D         E      GNDS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG
Sbjct: 188 ETDGGDATE-----KEGVGTTLGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG 247

Query: 241 FCPLCNRPIMEILDIF 244
            CPLCNR I+EILDIF
Sbjct: 248 SCPLCNRSILEILDIF 257

[Close]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match: gi|802778942|ref|XP_012091278.1| (PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 130/245 (53.06%), Postives = 155/245 (63.27%), Query Frame = 1 

Query: 1   MKEAARRETEARTIWGFLSDQMDGVDGGGRRRRQSLKQRLGFKVMGCCGATWGSRPATGS 60
           ++E+ARRE E  TI G L  QMD VDG  R  R  LK+RLG + + CCGATWG RP T S
Sbjct: 8   LQESARREREVITIIGLLRQQMDTVDGRRRTTRMGLKERLGLRGLACCGATWGFRPTTIS 67

Query: 61  VRGGGGGDDDDDDNDDQRVPETEVTN--PRRFQEERQLDRSFMSPLSVPSPATSGMNLAT 120
           VR         DD ++ R  +TEV N  P   QE          P  +P PA+SGMNLA 
Sbjct: 68  VR---------DDEEEPREQQTEVVNTGPTPSQE-------ISDPDCLPIPASSGMNLAA 127

Query: 121 ALAAERRLRASPRGAEGGFLESSNNDFDSLGGMMVTETPLKVSLIRLLNETDGSDGGRGS 180
           ALAAER+ R      E   +  SN + DS   M    TPL+VSL+RLL E   S+ G G 
Sbjct: 128 ALAAERQFR------EASSMNGSNGNADS---MTAPGTPLRVSLMRLLEE---SEVGDGE 187

Query: 181 LGVAEKKREEAGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGFCPLCNRPIME 240
           +G  EK+    G+D++CCVCM RKKGAAFIPCGHT+CRVCSRE+WLNRG CPLCNR I+E
Sbjct: 188 IGGGEKEGGGVGSDTVCCVCMVRKKGAAFIPCGHTYCRVCSREVWLNRGSCPLCNRLILE 224

Query: 241 ILDIF 244
           ILDIF
Sbjct: 248 ILDIF 224

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g09290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LUL4_ARATH1.3e-0640.35Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 S... [more]
BLAST of Cp4.1LG00g09290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMY7_CUCSA1.7e-9877.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512860 PE=4 SV=1[more]
A0A061GHE7_THECC1.1e-5256.05RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030... [more]
W9RJS4_9ROSA1.4e-5252.19Uncharacterized protein OS=Morus notabilis GN=L484_014139 PE=4 SV=1[more]
A0A166GZX8_DAUCA9.0e-5251.61Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002207 PE=4 SV=1[more]
V4W9T1_9ROSI1.7e-5050.61Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017636mg PE=4 SV=1[more]
BLAST of Cp4.1LG00g09290 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03965.15.6e-4545.53 RING/U-box superfamily protein[more]
AT4G22250.12.7e-3943.90 RING/U-box superfamily protein[more]
AT1G62370.18.7e-3037.90 RING/U-box superfamily protein[more]
AT3G25030.13.0e-2254.55 RING/U-box superfamily protein[more]
AT4G13100.26.7e-2247.71 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG00g09290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193867|gb|KGN49071.1|2.4e-9877.14hypothetical protein Csa_6G512860 [Cucumis sativus][more]
gi|659079058|ref|XP_008440052.1|2.0e-8978.83PREDICTED: uncharacterized protein LOC103484644 [Cucumis melo][more]
gi|778720231|ref|XP_004134982.2|1.5e-8776.79PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus][more]
gi|1009181356|ref|XP_015872124.1|6.6e-5651.95PREDICTED: death-associated inhibitor of apoptosis 1-like [Ziziphus jujuba][more]
gi|802778942|ref|XP_012091278.1|2.5e-5553.06PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g09290.1Cp4.1LG00g09290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 195..232
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 195..233
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 183..238
score: 3.9
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 18..100
score: 8.8E-30coord: 137..243
score: 8.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 192..238
score: 6.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 186..240
score: 1.44

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g09290Cucumber (Chinese Long) v3cpecucB0010
Cp4.1LG00g09290Cucurbita pepo (Zucchini)cpecpeB001