Cp4.1LG00g09120 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g09120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibose-5-phosphate isomerase A
LocationCp4.1LG00 : 28567838 .. 28568307 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCTCTCCTTTATCTCTCCTCCTTCTCTCTCCTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCCCAAAATCCATAAATCTCTCCGCCCATTGCCGACCTCTCTCCGTCCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTTAAAAAGCTCGCCGCCGACAAAGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACTGGTTCCACCGCCGCCTTCGTCGTCGCCAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGAGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGGTCATTAGGAATTCCTCTCTCTGTCTTGGACGACCATCCGCATCTCGATTTGGCCATCGATGGCGCTGATGAAGTCGATCCAGATCTGAATCTCGTCAAAGGCCGCGGCGGCGCTCTCTTGCGTGA

mRNA sequence

ATGGCTTCCCTCTCCTTTATCTCTCCTCCTTCTCTCTCCTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCCCAAAATCCATAAATCTCTCCGCCCATTGCCGACCTCTCTCCGTCCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTTAAAAAGCTCGCCGCCGACAAAGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACTGGTTCCACCGCCGCCTTCGTCGTCGCCAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGAGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGATCTGAATCTCGTCAAAGGCCGCGGCGGCGCTCTCTTGCGTGA

Coding sequence (CDS)

ATGGCTTCCCTCTCCTTTATCTCTCCTCCTTCTCTCTCCTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCCCAAAATCCATAAATCTCTCCGCCCATTGCCGACCTCTCTCCGTCCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTTAAAAAGCTCGCCGCCGACAAAGCCGTCGAGTATGTCAAGAGCGGCATGGTCCTCGGCCTCGGCACTGGTTCCACCGCCGCCTTCGTCGTCGCCAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGAGACATTGTTGGAATCCCTACCTCGAAGCGGACGGAGGAGCAAGCTAGATCTGAATCTCGTCAAAGGCCGCGGCGGCGCTCTCTTGCGTGA

Protein sequence

MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARSESRQRPRRRSLA
Homology
[Close]
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match: RPI3_ARATH (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=RPI3 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.3e-22
Identity = 71/121 (58.68%), Postives = 83/121 (68.60%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRP-----LSVQARSVSTLTQDD 60
           MASLSF+S             ++L LR+P     S    P      SV+A+SV  L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSV-ALSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 117
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL S +L DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 108

[Close]
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match: RPI2_ARATH (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana GN=RPI2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.4e-17
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 51  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRT 110
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 111 EEQARS 117
           +EQA S
Sbjct: 91  QEQALS 96

[Close]
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match: RPI1_ARATH (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana GN=RPI1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 

Query: 45  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGI 104
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L+DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 105 PTSKRTEEQARS 117
           PTS  T EQA S
Sbjct: 81  PTSTTTHEQAVS 92

[Close]
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-14
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 1 

Query: 52  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTE 111
           +QD LKK AA+KAVEY++SGMV+GLG+GSTA F +  I  L+K  +L+DIVGIP+S  TE
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 112 EQARS 117
           E ARS
Sbjct: 63  EVARS 67

[Close]
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match: RPIA_PEDPA (Ribose-5-phosphate isomerase A OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpiA PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 1 

Query: 51  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRT 110
           + Q++LKKL  ++AV++++ GM +GLGTGST  F+V  +GE +K+  L +IVG+PTS RT
Sbjct: 1   MDQNELKKLVGEEAVKFIEDGMTVGLGTGSTVKFMVDALGERVKNENL-NIVGVPTSDRT 60

Query: 111 EEQARS 117
            EQARS
Sbjct: 61  AEQARS 65

[Close]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match: A0A0A0LFJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011530 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-44
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60
           MASLSFISPPS+SSSRHVSSIANLLLRS K +NLS H RPLSV AR VSTLTQDDLKKLA
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VSTLTQDDLKKLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 117
           ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL DIVGIPTSKRTEEQARS
Sbjct: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 115

[Close]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match: U5GAQ0_POPTR (Ribose 5-phosphate isomerase-related family protein OS=Populus trichocarpa GN=POPTR_0005s05360g PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-29
Identity = 81/123 (65.85%), Postives = 97/123 (78.86%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSI-------ANLLLRSPKSINLSAHCRPLSVQARSVSTLTQ 60
           MASLS +  PS SSS  +SS+       + L LR+P S+NL    +  S++A+S   LTQ
Sbjct: 1   MASLSLLPSPSSSSSSSLSSLHHTTPSSSRLTLRTP-SLNLRTRTKISSIKAQSAPVLTQ 60

Query: 61  DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQ 117
           DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAK+GELLK+ +L+DI+G+PTSKRTEEQ
Sbjct: 61  DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELKDIIGVPTSKRTEEQ 120

[Close]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match: M5VZJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009739mg PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-29
Identity = 78/115 (67.83%), Postives = 97/115 (84.35%), Query Frame = 1 

Query: 2   ASLSFISPPSLSSSRHVSSIANLLLRSPKSINL-SAHCRPLSVQARSVSTLTQDDLKKLA 61
           +SLS +SP       H +S  +LLLR+PK+ NL S+  RP+S++AR+V  LTQD+LKKLA
Sbjct: 3   SSLSLLSP-------HNASTTHLLLRTPKTPNLRSSSYRPMSIKARTVPALTQDELKKLA 62

Query: 62  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 116
           ADKAVEYVKSGMVLGLGTGSTAAFVV+K+GELLKS +L++IVG+PTSKRTE+QAR
Sbjct: 63  ADKAVEYVKSGMVLGLGTGSTAAFVVSKLGELLKSGELQNIVGVPTSKRTEDQAR 110

[Close]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match: B9I5E5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s03700g PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-29
Identity = 82/120 (68.33%), Postives = 98/120 (81.67%), Query Frame = 1 

Query: 1   MASLSFISPPSLSS--SRH--VSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDL 60
           MASLSF+SPPS SS  S H    S + L LR+P S+NL A  +  S++A+S   LTQD+L
Sbjct: 1   MASLSFLSPPSSSSLSSLHNTTPSSSRLFLRTP-SLNLRAPTKIFSLKAQSAPVLTQDEL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 117
           KK+AADKAVEYVKSGMVLGLGTGSTAAFVVAK+GELLK+ +L +I+G+PTSKRTEEQARS
Sbjct: 61  KKIAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELTNIIGVPTSKRTEEQARS 119

[Close]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match: I1NC83_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G243800 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-29
Identity = 82/116 (70.69%), Postives = 92/116 (79.31%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60
           MASLS  SPPSLSS+ H +S   L+LR+P S+NL      L ++A    TLTQDDLK+LA
Sbjct: 1   MASLSLSSPPSLSSAHHNAS-TRLILRTPNSLNLRTIPHSLPIRA---ITLTQDDLKRLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 117
           ADKAVE VKSGMVLGLGTGSTAAFVVAK+G LL S QL DIVG+PTSKRTEEQARS
Sbjct: 61  ADKAVESVKSGMVLGLGTGSTAAFVVAKLGALLASGQLTDIVGVPTSKRTEEQARS 112

[Close]
BLAST of Cp4.1LG00g09120 vs. TAIR10
Match: AT3G04790.1 (AT3G04790.1 Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 71/121 (58.68%), Postives = 83/121 (68.60%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRP-----LSVQARSVSTLTQDD 60
           MASLSF+S             ++L LR+P     S    P      SV+A+SV  L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSV-ALSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 117
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL S +L DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 108

[Close]
BLAST of Cp4.1LG00g09120 vs. TAIR10
Match: AT2G01290.1 (AT2G01290.1 ribose-5-phosphate isomerase 2)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-18
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 51  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRT 110
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 111 EEQARS 117
           +EQA S
Sbjct: 91  QEQALS 96

[Close]
BLAST of Cp4.1LG00g09120 vs. TAIR10
Match: AT1G71100.1 (AT1G71100.1 Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 87.0 bits (214), Expect = 8.9e-18
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 

Query: 45  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGI 104
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L+DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 105 PTSKRTEEQARS 117
           PTS  T EQA S
Sbjct: 81  PTSTTTHEQAVS 92

[Close]
BLAST of Cp4.1LG00g09120 vs. TAIR10
Match: AT5G44520.1 (AT5G44520.1 NagB/RpiA/CoA transferase-like superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 1 

Query: 67  YVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQA 115
           YVKSGM++GLG+G  + F +  +G+ L S  L ++VG+P S R+  +A
Sbjct: 51  YVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEA 98

[Close]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match: gi|659070609|ref|XP_008455835.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-45
Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60
           MASLSFISPPSLSSSRHVSSIANLLLRS K +NLS HCRPLSV AR VSTLTQDDLKKLA
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSSKPLNLSTHCRPLSVHAR-VSTLTQDDLKKLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 117
           ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL DIVGIPTSKRTEEQARS
Sbjct: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 115

[Close]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match: gi|449442917|ref|XP_004139227.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 1 

Query: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60
           MASLSFISPPS+SSSRHVSSIANLLLRS K +NLS H RPLSV AR VSTLTQDDLKKLA
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VSTLTQDDLKKLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARS 117
           ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL DIVGIPTSKRTEEQARS
Sbjct: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 115

[Close]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match: gi|1009117613|ref|XP_015875411.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-32
Identity = 84/116 (72.41%), Postives = 96/116 (82.76%), Query Frame = 1 

Query: 2   ASLSFISPPSLSSSRH-VSSIANLLLRSPKSINLSAHCR-PLSVQARSVSTLTQDDLKKL 61
           +SLS +SPPSLSS+ H VSS A L++R+   +NL  H R P+S+ A S   LTQDDLKKL
Sbjct: 3   SSLSLLSPPSLSSNLHNVSSTARLIMRTTMPLNLRTHSRRPMSITAHSAPALTQDDLKKL 62

Query: 62  AADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 116
           AADKAV+YVKSGMVLGLGTGSTAAFVVAK+GELL S QL DIVG+PTSKRTEEQAR
Sbjct: 63  AADKAVDYVKSGMVLGLGTGSTAAFVVAKLGELLSSGQLTDIVGVPTSKRTEEQAR 118

[Close]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match: gi|694375877|ref|XP_009364519.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 77/114 (67.54%), Postives = 98/114 (85.96%), Query Frame = 1 

Query: 2   ASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLAA 61
           +SLS +SP + S++ H      L+LR+PKS N+S+  RP+S++AR+V  LTQDDLKKLAA
Sbjct: 4   SSLSLLSPHNASTATH------LILRTPKSPNMSSSYRPMSIKARTVPALTQDDLKKLAA 63

Query: 62  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 116
           DKAVEYVKSGMVLGLGTGSTAAFVV+K+GELLKS +L+D++G+PTSKRTE+QAR
Sbjct: 64  DKAVEYVKSGMVLGLGTGSTAAFVVSKLGELLKSGELKDVIGVPTSKRTEDQAR 111

[Close]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match: gi|657992812|ref|XP_008388666.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Malus domestica])

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 1 

Query: 2   ASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLAA 61
           +SLS +SP + S++ H      L+LR+PKS N+ +  RP+SV+AR+V  LTQDDLKKLAA
Sbjct: 4   SSLSLLSPHNASTATH------LILRTPKSPNMRSSYRPMSVKARTVPALTQDDLKKLAA 63

Query: 62  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQAR 116
           DKAVEYVKSGMVLGL TGSTAAFVV+K+GELLKS +L+DI+G+PTSKRTE+QAR
Sbjct: 64  DKAVEYVKSGMVLGLXTGSTAAFVVSKLGELLKSGELKDIIGVPTSKRTEDQAR 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g09120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPI3_ARATH4.3e-2258.68Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana G... [more]
RPI2_ARATH5.4e-1769.70Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana GN=RPI2 PE=1 SV=... [more]
RPI1_ARATH1.6e-1663.89Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana GN=RPI1 PE=1 SV=... [more]
RPIA_DESAA3.3e-1463.08Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) ... [more]
RPIA_PEDPA2.6e-1153.03Ribose-5-phosphate isomerase A OS=Pediococcus pentosaceus (strain ATCC 25745 / 1... [more]
BLAST of Cp4.1LG00g09120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFJ4_CUCSA2.8e-4491.38Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011530 PE=3 SV=1[more]
U5GAQ0_POPTR1.5e-2965.85Ribose 5-phosphate isomerase-related family protein OS=Populus trichocarpa GN=PO... [more]
M5VZJ1_PRUPE1.5e-2967.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009739mg PE=3 SV=1[more]
B9I5E5_POPTR2.5e-2968.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s03700g PE=3 SV=1[more]
I1NC83_SOYBN5.6e-2970.69Uncharacterized protein OS=Glycine max GN=GLYMA_19G243800 PE=3 SV=1[more]
BLAST of Cp4.1LG00g09120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04790.12.4e-2358.68 Ribose 5-phosphate isomerase, type A protein[more]
AT2G01290.13.1e-1869.70 ribose-5-phosphate isomerase 2[more]
AT1G71100.18.9e-1863.89 Ribose 5-phosphate isomerase, type A protein[more]
AT5G44520.13.5e-0643.75 NagB/RpiA/CoA transferase-like superfamily protein[more]
BLAST of Cp4.1LG00g09120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070609|ref|XP_008455835.1|1.2e-4593.10PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo][more]
gi|449442917|ref|XP_004139227.1|4.0e-4491.38PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativ... [more]
gi|1009117613|ref|XP_015875411.1|2.1e-3272.41PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Ziziphus juju... [more]
gi|694375877|ref|XP_009364519.1|1.3e-3167.54PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Pyrus x brets... [more]
gi|657992812|ref|XP_008388666.1|1.9e-3067.54PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Malus domesti... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004751ribose-5-phosphate isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0009052pentose-phosphate shunt, non-oxidative branch
Vocabulary: INTERPRO
TermDefinition
IPR004788Ribose5P_isomerase_typA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015976 carbon utilization
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0009409 response to cold
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0000165 MAPK cascade
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g09120.1Cp4.1LG00g09120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004788Ribose 5-phosphate isomerase, type APANTHERPTHR11934RIBOSE-5-PHOSPHATE ISOMERASEcoord: 2..116
score: 2.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.1360coord: 51..116
score: 1.0
NoneNo IPR availablePANTHERPTHR11934:SF0RIBOSE-5-PHOSPHATE ISOMERASEcoord: 2..116
score: 2.9
NoneNo IPR availableunknownSSF100950NagB/RpiA/CoA transferase-likecoord: 52..115
score: 3.89

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g09120Cucumber (Chinese Long) v3cpecucB0010
Cp4.1LG00g09120Cucurbita pepo (Zucchini)cpecpeB001