Cp4.1LG00g04250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g04250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPathogenesis-related protein PR-4
LocationCp4.1LG00 : 16004081 .. 16004595 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGGGAGCTTTTTGATGATATTAGCTTTGGCTTTGGGCATATTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTATAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCGATCGAGTGGCGTCGTCAGTACGGTTGGACTGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGCTTGAGGGTAAGTAAATCTCCTAGTTCTTGCGAAAAATTATCATGTTTTAGAGTTACAAATGTGGTGAGAAATTTTCATGGGAATGTTTGCAGGTCACTAACACTGAAACAGGAGCTTCGGAAATTGTGAGAATCGTTGATCAATGTGCCAATGGAGGGCTGGATTTGGATGTGAATGTGTTTAAGAGAATCGATACCAATGGAAATGGAGTCTTCCGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

mRNA sequence

ATGGAGAAAGGGAGCTTTTTGATGATATTAGCTTTGGCTTTGGGCATATTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTATAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCGATCGAGTGGCGTCGTCAGTACGGTTGGACTGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGCTTGAGGGTCACTAACACTGAAACAGGAGCTTCGGAAATTGTGAGAATCGTTGATCAATGTGCCAATGGAGGGCTGGATTTGGATGTGAATGTGTTTAAGAGAATCGATACCAATGGAAATGGAGTCTTCCGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Coding sequence (CDS)

ATGGAGAAAGGGAGCTTTTTGATGATATTAGCTTTGGCTTTGGGCATATTGAGCTTGGCTAATGCTCAAAGTGCCAACAATGTGAGGGCTACTTACCATTTGTATAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCGATCGAGTGGCGTCGTCAGTACGGTTGGACTGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGCTTGAGGGTCACTAACACTGAAACAGGAGCTTCGGAAATTGTGAGAATCGTTGATCAATGTGCCAATGGAGGGCTGGATTTGGATGTGAATGTGTTTAAGAGAATCGATACCAATGGAAATGGAGTCTTCCGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Protein sequence

MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC
Homology
[Close]
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match: PRP2_SOLLC (Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-56
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 16  ILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPV 75
           ++++A AQSA NVRATYHLYNPQ+INWD   ASV+CATWDA+KP+EWRR+YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIV 135
           GP GQASCGRCLRVTNT TG  E VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match: PR4B_TOBAC (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.5e-55
Identity = 94/127 (74.02%), Postives = 109/127 (85.83%), Query Frame = 1 

Query: 16  ILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPV 75
           ++++A AQSA NVR+TYHLYNPQ+INWD   AS FCATWDA+KP+ WR++YGWTAFCGP 
Sbjct: 19  MMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPA 78

Query: 76  GPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIV 135
           GPRGQ SCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHLIV
Sbjct: 79  GPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIV 138

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 139 NYEFVNC 145

[Close]
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match: PR4A_TOBAC (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 95/136 (69.85%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 7   LMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQY 66
           L+I+++   ++++A AQSA NVR+TYHLYNPQ+INWD   AS FCATWDA+KP+ WR++Y
Sbjct: 13  LLIISM---VMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKY 72

Query: 67  GWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGN 126
           GWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG 
Sbjct: 73  GWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGV 132

Query: 127 GVFRGHLIVNYQFVNC 143
           G  +GHL VNY+FVNC
Sbjct: 133 GYQQGHLTVNYEFVNC 145

[Close]
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-53
Identity = 88/119 (73.95%), Postives = 104/119 (87.39%), Query Frame = 1 

Query: 24  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDANKP+ WR++YGWTAFCGPVGPRG+ SC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVF++IDT+GNG  +GHLIVNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 1 

Query: 24  SANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQASC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT+G G  +GHLIVNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match: A0A0A0LIC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 2.7e-72
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match: A0A0A0LG76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010380 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-64
Identity = 115/142 (80.99%), Postives = 127/142 (89.44%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS  VRIVDQC+NGGLDLD+  FK 
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match: A0A072VMG3_MEDTR (Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_1g080810 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-55
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 1 

Query: 7   LMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQY 66
           L++    +G++ L + QSAN VR+TYHLYNPQ+INWDY RASV+CATWDAN+P+EWR++Y
Sbjct: 10  LLVFCFLVGMM-LVSGQSANGVRSTYHLYNPQNINWDYNRASVYCATWDANQPLEWRKKY 69

Query: 67  GWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGN 126
           GWTAFCGP GPRG+ SCG+CLRV NT TGA E VRIVDQCANGGLDLDVNVFKRIDTNG 
Sbjct: 70  GWTAFCGPQGPRGRDSCGKCLRVKNTATGAQETVRIVDQCANGGLDLDVNVFKRIDTNGQ 129

Query: 127 GVFRGHLIVNYQFVNC 143
           G  +GHLIV+Y FVNC
Sbjct: 130 GYQKGHLIVDYVFVNC 144

[Close]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match: A0A061F129_THECC (Pathogenesis-related protein P2 OS=Theobroma cacao GN=TCM_026324 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-55
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1 

Query: 9   ILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGW 68
           IL LA  + S A AQSA+NVRATYHLYNP+  NWD    S FCATWDANKP+EWRR+YGW
Sbjct: 8   ILLLACLVASAA-AQSASNVRATYHLYNPEQNNWDLTAVSAFCATWDANKPLEWRRKYGW 67

Query: 69  TAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGV 128
           TAFCGP GPRGQA+CGRCLRVTNT TGA   VRIVDQC+NGGLDLDVNVF+++DTNGNG+
Sbjct: 68  TAFCGPAGPRGQAACGRCLRVTNTGTGAQATVRIVDQCSNGGLDLDVNVFRQLDTNGNGI 127

Query: 129 FRGHLIVNYQFVNC 143
            +GHLIVNY FV+C
Sbjct: 128 AQGHLIVNYDFVDC 140

[Close]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match: I3SZI9_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-55
Identity = 99/136 (72.79%), Postives = 118/136 (86.76%), Query Frame = 1 

Query: 7   LMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQY 66
           L++    +G++S++  QSAN VR+TYHLYNPQ+INWDY RASV+CATWDAN+P+EWR++Y
Sbjct: 10  LLVFCFLVGMMSVSG-QSANGVRSTYHLYNPQNINWDYNRASVYCATWDANQPLEWRKKY 69

Query: 67  GWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGN 126
           GWTAFCGP GPRG+ SCG+CLRV NT TGA E VRIVDQCANGGLDLDV+VFKRIDTNG 
Sbjct: 70  GWTAFCGPQGPRGRDSCGKCLRVKNTATGAQETVRIVDQCANGGLDLDVDVFKRIDTNGQ 129

Query: 127 GVFRGHLIVNYQFVNC 143
           G  +GHLIV+Y FVNC
Sbjct: 130 GYQKGHLIVDYVFVNC 144

[Close]
BLAST of Cp4.1LG00g04250 vs. TAIR10
Match: AT3G04720.1 (AT3G04720.1 pathogenesis-related 4)

HSP 1 Score: 190.3 bits (482), Expect = 8.3e-49
Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 1 

Query: 23  QSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQAS 82
           +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQAS
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTNGNGVFRGHLIVNYQFVNC 142
           CG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +IDT+G G  +GHLIV+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

[Close]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match: gi|659070649|ref|XP_008456018.1| (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 3.5e-73
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           IDTNGNG FRGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match: gi|449442941|ref|XP_004139239.1| (PREDICTED: pathogenesis-related protein PR-4 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 3.9e-72
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match: gi|449442937|ref|XP_004139237.1| (PREDICTED: pathogenesis-related protein PR-4A-like [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64
Identity = 115/142 (80.99%), Postives = 127/142 (89.44%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+
Sbjct: 1   MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS  VRIVDQC+NGGLDLD+  FK 
Sbjct: 61  EWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKA 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           IDTNGNG   GHL VNY+FVNC
Sbjct: 121 IDTNGNGYKNGHLKVNYEFVNC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match: gi|659070651|ref|XP_008456027.1| (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 7.8e-57
Identity = 104/142 (73.24%), Postives = 119/142 (83.80%), Query Frame = 1 

Query: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60
           MEK S +MIL LALG+LSLANAQSA NV ATYHLYNPQ INWDY +A+V+CATWDANKP 
Sbjct: 1   MEKESIVMILLLALGVLSLANAQSATNVTATYHLYNPQIINWDYTKANVYCATWDANKPF 60

Query: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120
           EWR +YGWTAFCGPVGP GQASCGRC +VTN ET AS IVRIVD+C+ GG DLDV VF R
Sbjct: 61  EWRSRYGWTAFCGPVGPHGQASCGRCTKVTNAETKASTIVRIVDECSYGGFDLDVGVFMR 120

Query: 121 IDTNGNGVFRGHLIVNYQFVNC 143
           +DT+G G   G ++VNY+FV+C
Sbjct: 121 LDTDGIGSTNGFIMVNYEFVDC 142

[Close]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match: gi|1009117494|ref|XP_015875350.1| (PREDICTED: pathogenesis-related protein PR-4-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55
Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = 1 

Query: 5   SFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPIEWRR 64
           SFLM+L L   ++    A SAN VRATYHLYNP++I +D  RA+ FCATWDANKP+EWRR
Sbjct: 8   SFLMVLLLITCLVGSGTANSANRVRATYHLYNPRNIGYDLSRANAFCATWDANKPLEWRR 67

Query: 65  QYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKRIDTN 124
           +YGWTAFCGP GPRGQA+CG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVF +IDTN
Sbjct: 68  KYGWTAFCGPAGPRGQAACGKCLRVTNTATGAQATVRIVDQCSNGGLDLDVNVFNKIDTN 127

Query: 125 GNGVFRGHLIVNYQFVNC 143
           G G  +GHLIVNYQFVNC
Sbjct: 128 GRGHAQGHLIVNYQFVNC 145

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g04250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP2_SOLLC1.3e-5677.17Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1[more]
PR4B_TOBAC2.5e-5574.02Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1[more]
PR4A_TOBAC1.2e-5469.85Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1[more]
WIN1_SOLTU2.3e-5373.95Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1[more]
WIN2_SOLTU1.3e-5173.11Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1[more]
BLAST of Cp4.1LG00g04250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIC8_CUCSA2.7e-7290.85Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010390 PE=4 SV=1[more]
A0A0A0LG76_CUCSA1.2e-6480.99Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010380 PE=4 SV=1[more]
A0A072VMG3_MEDTR1.0e-5573.53Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_1g080810 PE=... [more]
A0A061F129_THECC3.0e-5575.37Pathogenesis-related protein P2 OS=Theobroma cacao GN=TCM_026324 PE=4 SV=1[more]
I3SZI9_MEDTR3.0e-5572.79Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
BLAST of Cp4.1LG00g04250 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04720.18.3e-4968.33 pathogenesis-related 4[more]
BLAST of Cp4.1LG00g04250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070649|ref|XP_008456018.1|3.5e-7391.55PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo][more]
gi|449442941|ref|XP_004139239.1|3.9e-7290.85PREDICTED: pathogenesis-related protein PR-4 [Cucumis sativus][more]
gi|449442937|ref|XP_004139237.1|1.7e-6480.99PREDICTED: pathogenesis-related protein PR-4A-like [Cucumis sativus][more]
gi|659070651|ref|XP_008456027.1|7.8e-5773.24PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo][more]
gi|1009117494|ref|XP_015875350.1|1.1e-5573.19PREDICTED: pathogenesis-related protein PR-4-like isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0050832defense response to fungus
GO:0042742defense response to bacterium
Vocabulary: INTERPRO
TermDefinition
IPR018226Barwin_CS
IPR009009RlpA-like_DPBB
IPR001153Barwin_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g04250.1Cp4.1LG00g04250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRODOMPD004535coord: 31..142
score: 1.0
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 117..141
score: 5.6E-42coord: 58..76
score: 5.6E-42coord: 96..114
score: 5.6E-42coord: 77..95
score: 5.6
IPR001153Barwin domainPFAMPF00967Barwincoord: 24..142
score: 1.2
IPR001153Barwin domainPROFILEPS51174BARWIN_3coord: 23..142
score: 79
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 24..142
score: 7.7
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 24..142
score: 2.27
IPR018226Barwin, conserved sitePROSITEPS00771BARWIN_1coord: 83..91
scor
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 135..142
scor
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 1..142
score: 4.6
NoneNo IPR availablePANTHERPTHR22595:SF62HEVEIN-LIKE PREPROPROTEINcoord: 1..142
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g04250Wax gourdcpewgoB0007
Cp4.1LG00g04250Cucurbita pepo (Zucchini)cpecpeB015
Cp4.1LG00g04250Cucurbita pepo (Zucchini)cpecpeB000
Cp4.1LG00g04250Cucumber (Gy14) v1cgycpeB0350
Cp4.1LG00g04250Cucurbita maxima (Rimu)cmacpeB165
Cp4.1LG00g04250Cucurbita maxima (Rimu)cmacpeB760
Cp4.1LG00g04250Cucurbita moschata (Rifu)cmocpeB141
Cp4.1LG00g04250Cucurbita moschata (Rifu)cmocpeB714
Cp4.1LG00g04250Wild cucumber (PI 183967)cpecpiB005
Cp4.1LG00g04250Cucumber (Chinese Long) v2cpecuB007
Cp4.1LG00g04250Bottle gourd (USVL1VR-Ls)cpelsiB004
Cp4.1LG00g04250Watermelon (Charleston Gray)cpewcgB010
Cp4.1LG00g04250Watermelon (97103) v1cpewmB016
Cp4.1LG00g04250Melon (DHL92) v3.5.1cpemeB009
Cp4.1LG00g04250Cucumber (Gy14) v2cgybcpeB152
Cp4.1LG00g04250Melon (DHL92) v3.6.1cpemedB011
Cp4.1LG00g04250Silver-seed gourdcarcpeB1003
Cp4.1LG00g04250Silver-seed gourdcarcpeB1493
Cp4.1LG00g04250Cucumber (Chinese Long) v3cpecucB0007