Cp4.1LG00g03150 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g03150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Actin-related protein 2/3 complex subunit 1B, putative isoform 1
Location	Cp4.1LG00 : 11298716 .. 11302038 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTCCGCTAGACTTCGAGTCGGAAGACCCACTCCTCAGTTCCCCTGTTTCTCTCAAGAAGAGGTTTCATTCTCTCCGAAATCACCCAAATCCTTTAGTTCGTGTTTTCTTTTTCATAATTTTGACATGGGTTTCTCTTTTCATTTCTAATTTCATCTGGGTTCTCGTTTCCATACTGTTTTCCATTCAAATTTGTGTTGCAATTCCAATAGTAGCATATTTACTCTATAAAGGAAGCTAAGAAATAGCCGTTCTGCTGATTGTTCTTAGCTCTCTGAGCACCAATGGCCCTNTTACTCTATAAAGGAAGCTAAGAAATAGCCGTTCTGCTGATTCTTCTTAGCTCTCTGAGCACCAATGGCCCTTGATGTCTATATTTTTACCAATTAGGAAAAAGATTATCGGGTTAGATGATCTTCTCACTGATCATTACAAGGATAAATGCAAACTCGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAAGTACGATTCAGATGATGAGGACTTTGGCAAAGAGGCTGTGGTGTCCCAAGTTGTTGATGAATGCCAAAATAAGGTAAATTATGCCTGGCGACCAAGAATTATCAGCCTTCTTTCACTAATGATGGGAGAATGTTTTGTGTAGATGAATCAATTGGGAGGTGAGGAAGATACATCCATATGGGGCTTAAACGTTTTTGGAGAACAGGTTTTCGGTTCAACATTACAGCTTCTTATATGCTTTTGATTGTCTAAAATATCTTCATATGAGAGGTCTTCTTTGTGAAGCTGAGTTTCTATGCATGTAAATTGCAGAAACCCCCACCAGCATTACAAAGTCCTGAACTCAAAAATTGCTACCTTTTGCAAACATTCCTGAATAATGAAGTTAACTCTTTGGTGAATCTCACCGTGGAGAAAGGTGTGTATTTCCTTTATGTTTGAGTTCTCCTAATCTCTCCAATCATGTACTAATTTTTTTTTGTAGTTTTTGTTAATTGAGTTATTTTATACCCATCACTATTTTTATCTTGTATAATAAATACTAAAGTTATAGAGTTCAATTTTTGTTTCCTCCACATCTTTGTTATATAAAAAATAGTTGACTAAGGGGTTGATCATGGATTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCTTTTTGGGGAAACAAAAAACAAAGTCATGAGAGATTATGCTCAAAGTCGACAATATCATATCATTGTGAAGAGTTGTGGTTTCTAACATGGTATCAGAATCATGCCCTTAACTTAGCTATGTCAATAGAATCCTCAAATGTCGAATAGAAAAGTTGTGAGCCTCAAAGGTGTAGTCAAAAGTGACTCAAGTGTCCTTTCTTCGAGTGCTCCAGAGAAGGAGTCAAGCCTCAATTAAGGGGAGGCTATTCGAGGGCTCCATAGGTCTTAGGGGAGGCTCTATGGTGTATTTTGTTCGAGGGGAGGATTGTTGAGAATTGTTGGGTGAGAAGTCCCACATCGACTAATTAAGGGGTTGATCATGAGTTTATAAGTAAGGAATACATCTTCACTAGGATGAGGCCTTTTGGGGAAACAAAAAATAAAGCCATGAGAGCTTAGGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGGTTTCTAACAAGCCTAGGACTCTATCGTTGTTAGTAAATATAGCTTGAATTGGTTTGGTTGAGCAGAGTACAAATAAACATATGTATTAATTACGGCTCTTGGAGTTCCCTTTCGCAACTATTTCTGGATTTTGTCACTAAAACTTTGTGCTAAGATAATATTGTTTTAAAGATAAGTGCTAAGATAATATGGTTGTTTGTTGAATTTTCCTTTTCCTTCTTTAGATGGTATCATACTATTTCAGGTAATGGGGACTCTGTTTGGTTCCTTAAAGCTCTCTGGTAGATTTACTCTGAAAGTTAATGCAATAAAGGACTTGAGGGCCTGATGTGGAGGTTCAGAAGTCCATTTCTTTGCATGAGAGTTGTTGCTTAGGAGGCTACATTATATTATCTATAAATTCAAAGAAGCCACCTTTCCTTGTCTCTGTTATCGTAAGTGCATCCTTTGAGAGAAGGCAAGCGAAGACTTGCACTGTATTATGATACTCTGTTGTAACAGCTCAAACCCACCGCTAATAGATATAGTCTTCTTTGGATTTTTCTTTTTAGGCTTTCCTTCAAAGTTTTTAAAACGCGTCTGCTAGGAAGAGGTTTCCACTCCCTTATAAAAAAATGTTTCGTTCTCCTTTCCAACTGATGTGGGATCTCAGGGCCCAACGTCCTTGTTGGTACCCGTTCTCTTCTCCAATCAATGTGGAACCTCCCAATCCACCCTCCTTCGAGGTCCAACGTCCTTGTTGGCACACTGCCTCATGTCCACCCCCCCCCCCTTCGGGGCTTAGCCACCTCGCTGGCACATCGCCCAATGTCTGCCTCTAATACCATTTGTAATAGCTCAAGTCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTCGGGTTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGATTTCTACGCTCTTATAAAGAATGCTTCGTTCTCTTCTCCAACCGATGTGAGATCTCATAACTGTCCTCTGAGAGTGAAGTCGTGGGAGAATTTTTAAGAGATGCTTAGATTCTCATGGGAGCCGTACTTTTGGTTGAAAGAAATTTCGAATGATCTTTGGCCCTTCGTTTTTTTTCTAGAAAGAACAGGAAAAAATGATAAAGAAGTCCCCCATCTTATGGGTCAGTTGTAGAAAAAGTCGAGGAAATAGAGTAATTGTCTTGCAGTTCTGCTTTTTATTAACACTCATCTATAATTTATCCAATACTTTTGTAATGCTCCTTAGTTATATCCATTCTTATAGAATTTCATTCATTTTCATACAAAATAGAAGAAAAGAAAGGAAAACCATGATGTTTCTTAAACTCTAAAGCCTATCAAAAACTAATTAAATAAGTTACTGATAATATTTATTTGATATGTTCTTACAGGTGAAGCTTTCCTTGAAGGTTTATTGGTAAACGGTTGGCTTTCAACGCTCGTTTCTGTGACGAATCGTGTAGAAAAACCTCTTGCCATATGGACTTTCAATTTAAGTGAGTTCATCTATTGTTTCAGTCATGTTTATGGAACTCCAAACAGTATCATTACTTCTTTTTTATATGTTTATTTTGATATTTCAGTGTTATATTCATCAAGAGAAGAACTAAGTACATCTGCTTGTGATTTCTGGAGGGATATCATGTTAACAACAAATGAGGTCTCTCTTTTTCCTTTGACCACA

mRNA sequence

ATGGATGACTTCGAGTCGGAAGACCCACTCCTCAGTTCCCCTGTTTCTCTCAAGAAGAGGAAAAAGATTATCGGGTTAGATGATCTTCTCACTGATCATTACAAGGATAAATGCAAACTCGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAAGTACGATTCAGATGATGAGGACTTTGGCAAAGAGGCTGTGGTGTCCCAAGTTGTTGATGAATGCCAAAATAAGATGAATCAATTGGGAGGTGAGGAAGATACATCCATATGGGGCTTAAACGTTTTTGGAGAACAGAAACCCCCACCAGCATTACAAAGTCCTGAACTCAAAAATTGCTACCTTTTGCAAACATTCCTGAATAATGAAGTTAACTCTTTGGTGAATCTCACCGTGGAGAAAGGTGAAGCTTTCCTTGAAGGTTTATTGGTAAACGGTTGGCTTTCAACGCTCGTTTCTGTGACGAATCGTGTAGAAAAACCTCTTGCCATATGGACTTTCAATTTAATGTTATATTCATCAAGAGAAGAACTAAGTACATCTGCTTGTGATTTCTGGAGGGATATCATGTTAACAACAAATGAGGTCTCTCTTTTTCCTTTGACCACA

Coding sequence (CDS)

ATGGATGACTTCGAGTCGGAAGACCCACTCCTCAGTTCCCCTGTTTCTCTCAAGAAGAGGAAAAAGATTATCGGGTTAGATGATCTTCTCACTGATCATTACAAGGATAAATGCAAACTCGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAAGTACGATTCAGATGATGAGGACTTTGGCAAAGAGGCTGTGGTGTCCCAAGTTGTTGATGAATGCCAAAATAAGATGAATCAATTGGGAGGTGAGGAAGATACATCCATATGGGGCTTAAACGTTTTTGGAGAACAGAAACCCCCACCAGCATTACAAAGTCCTGAACTCAAAAATTGCTACCTTTTGCAAACATTCCTGAATAATGAAGTTAACTCTTTGGTGAATCTCACCGTGGAGAAAGGTGAAGCTTTCCTTGAAGGTTTATTGGTAAACGGTTGGCTTTCAACGCTCGTTTCTGTGACGAATCGTGTAGAAAAACCTCTTGCCATATGGACTTTCAATTTAATGTTATATTCATCAAGAGAAGAACTAAGTACATCTGCTTGTGATTTCTGGAGGGATATCATGTTAACAACAAATGAGGTCTCTCTTTTTCCTTTGACCACA

Protein sequence

MDDFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNEVNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSACDFWRDIMLTTNEVSLFPLTT

Homology

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BLAST of Cp4.1LG00g03150 vs. TrEMBL
Match: A0A0A0LVC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095530 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.8e-93
Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLLSSPV+LKKRKKIIGLDDLLTDHYKDKCKLVEKESK AKK+K YDSDD+DFG
Sbjct: 8   DFESEDPLLSSPVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKLAKKRKNYDSDDDDFG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQ+PEL++C  LQTFLNNE
Sbjct: 68  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQTPELESCQFLQTFLNNE 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           VNSLVNLTVEKG+ FLEGLLVNGWLSTLVS+T  VEK LAIWTFNLMLYSSRE L TSAC
Sbjct: 128 VNSLVNLTVEKGDVFLEGLLVNGWLSTLVSLTGHVEKSLAIWTFNLMLYSSREGLRTSAC 187

Query: 183 DFWRDIMLTTNEV 196
           DFW+DIMLTTNEV
Sbjct: 188 DFWKDIMLTTNEV 200

[Close]

BLAST of Cp4.1LG00g03150 vs. TrEMBL
Match: B9HQN6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01180g PE=4 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-61
Identity = 118/198 (59.60%), Postives = 155/198 (78.28%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFE EDPLL+SPV +KK KK+IGLDDLLTDHY++K K++E+ESK+AK KKKYDSD++DF 
Sbjct: 6   DFEFEDPLLNSPVIVKKSKKVIGLDDLLTDHYQEKSKVIERESKRAKAKKKYDSDEDDFD 65

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEA++S+ + EC N+M +L GE + + WG++VFG QK  P L  PEL +C LLQ+F+++E
Sbjct: 66  KEALLSKQIIECHNQMQELSGEAEIATWGVHVFGNQKRLPVLTLPELGSCSLLQSFMSSE 125

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +NSLV LT EK E FLEGLLVNGWLS LV+  + +EK +A WTF LMLYSS+EEL  SAC
Sbjct: 126 LNSLVELTTEKVETFLEGLLVNGWLSKLVNTRSYIEKSIAKWTFYLMLYSSKEELRASAC 185

Query: 183 DFWRDIMLTTNEVSLFPL 201
           DFW +I+   ++    P+
Sbjct: 186 DFWCNILSPRDKTEKLPI 203

[Close]

BLAST of Cp4.1LG00g03150 vs. TrEMBL
Match: U5G022_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01180g PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-61
Identity = 118/198 (59.60%), Postives = 155/198 (78.28%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFE EDPLL+SPV +KK KK+IGLDDLLTDHY++K K++E+ESK+AK KKKYDSD++DF 
Sbjct: 6   DFEFEDPLLNSPVIVKKSKKVIGLDDLLTDHYQEKSKVIERESKRAKAKKKYDSDEDDFD 65

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEA++S+ + EC N+M +L GE + + WG++VFG QK  P L  PEL +C LLQ+F+++E
Sbjct: 66  KEALLSKQIIECHNQMQELSGEAEIATWGVHVFGNQKRLPVLTLPELGSCSLLQSFMSSE 125

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +NSLV LT EK E FLEGLLVNGWLS LV+  + +EK +A WTF LMLYSS+EEL  SAC
Sbjct: 126 LNSLVELTTEKVETFLEGLLVNGWLSKLVNTRSYIEKSIAKWTFYLMLYSSKEELRASAC 185

Query: 183 DFWRDIMLTTNEVSLFPL 201
           DFW +I+   ++    P+
Sbjct: 186 DFWCNILSPRDKTEKLPI 203

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BLAST of Cp4.1LG00g03150 vs. TrEMBL
Match: B9SCJ4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0474390 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 117/197 (59.39%), Postives = 153/197 (77.66%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPL S+P   +KRKK+IGLDDLLTD+YK+K K++E+ESK+AK +K Y+SD++D G
Sbjct: 9   DFESEDPLASTPAITQKRKKVIGLDDLLTDYYKEKSKVIERESKRAKSRKYYNSDEDDCG 68

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEA++S+ ++ECQN+M ++  EE+ S WG+ VFG +K PP L  PEL++C  L +F++N+
Sbjct: 69  KEALLSRKINECQNQMRKMSAEEEISTWGVQVFGNEKTPPPLVFPELQSCSFLHSFMSNK 128

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +NSLV LT EKGE FL GLLVNGWLS LV     VE+ LA WTFNL+LYSS+EEL TSA 
Sbjct: 129 LNSLVELTTEKGETFLAGLLVNGWLSKLVIRHGHVEESLAKWTFNLILYSSKEELRTSAH 188

Query: 183 DFWRDIMLTTNEVSLFP 200
           DFW  I+L  N+V   P
Sbjct: 189 DFWCSILLPGNKVDKMP 205

[Close]

BLAST of Cp4.1LG00g03150 vs. TrEMBL
Match: M5W453_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005516mg PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 114/198 (57.58%), Postives = 153/198 (77.27%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLL+ P   KKRKK IGLDDLLTD YK++ KLVEK+SK+AK ++  DSD+ED  
Sbjct: 9   DFESEDPLLNRPAVTKKRKKAIGLDDLLTDFYKEEDKLVEKKSKRAKPRRNNDSDEEDNH 68

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEA +  +VD+C+N+M ++ G+ED+ +WG+  FG+QK PP L  PE+K+C LLQ+F+N+E
Sbjct: 69  KEAALYDIVDKCENEMREISGKEDSFVWGICAFGDQKTPPPLSFPEIKSCTLLQSFINDE 128

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +NS+++++ E G+ FLEGLLVNGWLS LV  +  +EK +A WTFNLMLYS +E+L  SAC
Sbjct: 129 LNSVIDISTENGDTFLEGLLVNGWLSKLVFASRHLEKSVATWTFNLMLYSPKEDLRASAC 188

Query: 183 DFWRDIMLTTNEVSLFPL 201
           DFW  I+   NEV L P+
Sbjct: 189 DFWCAILSFENEVDLQPI 206

[Close]

BLAST of Cp4.1LG00g03150 vs. TAIR10
Match: AT2G28130.1 (AT2G28130.1 unknown protein)

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-54
Identity = 99/194 (51.03%), Postives = 145/194 (74.74%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFE+EDPL++ P  ++KRKK+IGLDDLL+D YK+K K+++K +K+ K  K Y SDD++ G
Sbjct: 8   DFENEDPLVNPPTIIEKRKKVIGLDDLLSDFYKEKSKVIDKVNKKRKVSKVYHSDDDEQG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           +   +SQ V ECQN+MN++  EE+   WGL++FG+QK P      +L +C LL+ F+NN+
Sbjct: 68  QVDKLSQCVVECQNQMNEIADEEENQEWGLSMFGDQKTPIPSLLVDLDSCCLLKEFMNNQ 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +N +V LTV++G  F+EGLLVNGWL+ L+    RVEK +  WT N++LYSS+E+L +SAC
Sbjct: 128 LNLVVGLTVDEGTTFIEGLLVNGWLTRLIMTCGRVEKFICKWTLNILLYSSKEDLRSSAC 187

Query: 183 DFWRDIMLTTNEVS 197
           DFW  I+L+ N+V+
Sbjct: 188 DFWCSILLSQNKVN 201

[Close]

BLAST of Cp4.1LG00g03150 vs. NCBI nr
Match: gi|778659030|ref|XP_011653682.1| (PREDICTED: uncharacterized protein LOC101216339 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93
Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLLSSPV+LKKRKKIIGLDDLLTDHYKDKCKLVEKESK AKK+K YDSDD+DFG
Sbjct: 8   DFESEDPLLSSPVALKKRKKIIGLDDLLTDHYKDKCKLVEKESKLAKKRKNYDSDDDDFG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQ+PEL++C  LQTFLNNE
Sbjct: 68  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQTPELESCQFLQTFLNNE 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           VNSLVNLTVEKG+ FLEGLLVNGWLSTLVS+T  VEK LAIWTFNLMLYSSRE L TSAC
Sbjct: 128 VNSLVNLTVEKGDVFLEGLLVNGWLSTLVSLTGHVEKSLAIWTFNLMLYSSREGLRTSAC 187

Query: 183 DFWRDIMLTTNEV 196
           DFW+DIMLTTNEV
Sbjct: 188 DFWKDIMLTTNEV 200

[Close]

BLAST of Cp4.1LG00g03150 vs. NCBI nr
Match: gi|659072086|ref|XP_008463348.1| (PREDICTED: uncharacterized protein LOC103501522 isoform X2 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-92
Identity = 172/193 (89.12%), Postives = 185/193 (95.85%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLLSSPV+LKKRKKIIGLDDLLTDHYKDKCKLVEKE+K AKKKKKYDSDD+DFG
Sbjct: 8   DFESEDPLLSSPVALKKRKKIIGLDDLLTDHYKDKCKLVEKEAKLAKKKKKYDSDDDDFG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEAVV+QVVD+CQNKMNQLGGEEDTSIWGL VFGEQKPPPAL+SPEL++C  LQTFLN+E
Sbjct: 68  KEAVVTQVVDQCQNKMNQLGGEEDTSIWGLVVFGEQKPPPALESPELESCQFLQTFLNSE 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           VNSLVNLTVEKG+AFLEGLLVNGWLSTLVS+T R EK LAIWTFNLMLYSSRE+L TSAC
Sbjct: 128 VNSLVNLTVEKGDAFLEGLLVNGWLSTLVSLTGRAEKSLAIWTFNLMLYSSREDLRTSAC 187

Query: 183 DFWRDIMLTTNEV 196
           DFW+DIMLTTNEV
Sbjct: 188 DFWKDIMLTTNEV 200

[Close]

BLAST of Cp4.1LG00g03150 vs. NCBI nr
Match: gi|659072084|ref|XP_008463342.1| (PREDICTED: uncharacterized protein LOC103501522 isoform X1 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.4e-90
Identity = 171/199 (85.93%), Postives = 185/199 (92.96%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLLSSPV+LKKRKKIIGLDDLLTDHYKDKCKLVEKE+K AKKKKKYDSDD+DFG
Sbjct: 8   DFESEDPLLSSPVALKKRKKIIGLDDLLTDHYKDKCKLVEKEAKLAKKKKKYDSDDDDFG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEAVV+QVVD+CQNKMNQLGGEEDTSIWGL VFGEQKPPPAL+SPEL++C  LQTFLN+E
Sbjct: 68  KEAVVTQVVDQCQNKMNQLGGEEDTSIWGLVVFGEQKPPPALESPELESCQFLQTFLNSE 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNL------MLYSSREE 182
           VNSLVNLTVEKG+AFLEGLLVNGWLSTLVS+T R EK LAIWTFNL      +LYSSRE+
Sbjct: 128 VNSLVNLTVEKGDAFLEGLLVNGWLSTLVSLTGRAEKSLAIWTFNLIYFHISVLYSSRED 187

Query: 183 LSTSACDFWRDIMLTTNEV 196
           L TSACDFW+DIMLTTNEV
Sbjct: 188 LRTSACDFWKDIMLTTNEV 206

[Close]

BLAST of Cp4.1LG00g03150 vs. NCBI nr
Match: gi|659072088|ref|XP_008463357.1| (PREDICTED: uncharacterized protein LOC103501522 isoform X3 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.4e-90
Identity = 171/199 (85.93%), Postives = 185/199 (92.96%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFESEDPLLSSPV+LKKRKKIIGLDDLLTDHYKDKCKLVEKE+K AKKKKKYDSDD+DFG
Sbjct: 8   DFESEDPLLSSPVALKKRKKIIGLDDLLTDHYKDKCKLVEKEAKLAKKKKKYDSDDDDFG 67

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEAVV+QVVD+CQNKMNQLGGEEDTSIWGL VFGEQKPPPAL+SPEL++C  LQTFLN+E
Sbjct: 68  KEAVVTQVVDQCQNKMNQLGGEEDTSIWGLVVFGEQKPPPALESPELESCQFLQTFLNSE 127

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNL------MLYSSREE 182
           VNSLVNLTVEKG+AFLEGLLVNGWLSTLVS+T R EK LAIWTFNL      +LYSSRE+
Sbjct: 128 VNSLVNLTVEKGDAFLEGLLVNGWLSTLVSLTGRAEKSLAIWTFNLIYFHISVLYSSRED 187

Query: 183 LSTSACDFWRDIMLTTNEV 196
           L TSACDFW+DIMLTTNEV
Sbjct: 188 LRTSACDFWKDIMLTTNEV 206

[Close]

BLAST of Cp4.1LG00g03150 vs. NCBI nr
Match: gi|566185712|ref|XP_006378943.1| (hypothetical protein POPTR_0009s01180g [Populus trichocarpa])

HSP 1 Score: 242.3 bits (617), Expect = 7.4e-61
Identity = 118/198 (59.60%), Postives = 155/198 (78.28%), Query Frame = 1


Query: 3   DFESEDPLLSSPVSLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKKYDSDDEDFG 62
           DFE EDPLL+SPV +KK KK+IGLDDLLTDHY++K K++E+ESK+AK KKKYDSD++DF 
Sbjct: 6   DFEFEDPLLNSPVIVKKSKKVIGLDDLLTDHYQEKSKVIERESKRAKAKKKYDSDEDDFD 65

Query: 63  KEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQKPPPALQSPELKNCYLLQTFLNNE 122
           KEA++S+ + EC N+M +L GE + + WG++VFG QK  P L  PEL +C LLQ+F+++E
Sbjct: 66  KEALLSKQIIECHNQMQELSGEAEIATWGVHVFGNQKRLPVLTLPELGSCSLLQSFMSSE 125

Query: 123 VNSLVNLTVEKGEAFLEGLLVNGWLSTLVSVTNRVEKPLAIWTFNLMLYSSREELSTSAC 182
           +NSLV LT EK E FLEGLLVNGWLS LV+  + +EK +A WTF LMLYSS+EEL  SAC
Sbjct: 126 LNSLVELTTEKVETFLEGLLVNGWLSKLVNTRSYIEKSIAKWTFYLMLYSSKEELRASAC 185

Query: 183 DFWRDIMLTTNEVSLFPL 201
           DFW +I+   ++    P+
Sbjct: 186 DFWCNILSPRDKTEKLPI 203

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g03150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g03150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVC0_CUCSA	1.8e-93	90.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G095530 PE=4 SV=1	[more]
B9HQN6_POPTR	5.2e-61	59.60	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01180g PE=4 SV=2	[more]
U5G022_POPTR	5.2e-61	59.60	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s01180g PE=4 SV=1	[more]
B9SCJ4_RICCO	3.4e-60	59.39	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0474390 PE=4 SV=1	[more]
M5W453_PRUPE	3.4e-60	57.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005516mg PE=4 SV=1	[more]

BLAST of Cp4.1LG00g03150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28130.1	3.2e-54	51.03	unknown protein	[more]

BLAST of Cp4.1LG00g03150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659030\|ref\|XP_011653682.1\|	2.5e-93	90.16	PREDICTED: uncharacterized protein LOC101216339 [Cucumis sativus]	[more]
gi\|659072086\|ref\|XP_008463348.1\|	1.3e-92	89.12	PREDICTED: uncharacterized protein LOC103501522 isoform X2 [Cucumis melo]	[more]
gi\|659072084\|ref\|XP_008463342.1\|	3.4e-90	85.93	PREDICTED: uncharacterized protein LOC103501522 isoform X1 [Cucumis melo]	[more]
gi\|659072088\|ref\|XP_008463357.1\|	3.4e-90	85.93	PREDICTED: uncharacterized protein LOC103501522 isoform X3 [Cucumis melo]	[more]
gi\|566185712\|ref\|XP_006378943.1\|	7.4e-61	59.60	hypothetical protein POPTR_0009s01180g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g03150.1	Cp4.1LG00g03150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37212	FAMILY NOT NAMED	coord: 1..200 score: 1.3
None	No IPR available	PANTHER	PTHR37212:SF1	SUBFAMILY NOT NAMED	coord: 1..200 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g03150	Wax gourd	cpewgoB0006
Cp4.1LG00g03150	Cucumber (Gy14) v1	cgycpeB0730
Cp4.1LG00g03150	Cucurbita maxima (Rimu)	cmacpeB693
Cp4.1LG00g03150	Cucurbita moschata (Rifu)	cmocpeB645
Cp4.1LG00g03150	Wild cucumber (PI 183967)	cpecpiB013
Cp4.1LG00g03150	Cucumber (Chinese Long) v2	cpecuB016
Cp4.1LG00g03150	Melon (DHL92) v3.5.1	cpemeB001
Cp4.1LG00g03150	Cucumber (Gy14) v2	cgybcpeB579
Cp4.1LG00g03150	Melon (DHL92) v3.6.1	cpemedB001
Cp4.1LG00g03150	Cucumber (Chinese Long) v3	cpecucB0016