Cp4.1LG00g02870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g02870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix loop helix (BHLH) family transcription factor
LocationCp4.1LG00 : 8791900 .. 8796254 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTTCATACATAAACAGCTGAAAGCTCAGAGGGCGGGCAATTGAAGTGGAAGTGAAGATCATCGGAGAAGATCAGGCGGTGATCAAAGTTCAAACCAAGAATGTGAGCTATGCCATGACGAAATTAATGGAAGCGCTCAGAGATTTGGAGGTGAAGGTTCACCATGCGAGCATGTCCAATTTACAGGACATGACTCTGGAGGATTTGGTTGGATCTATTACTGAAGAAGGTATTAAGCAAGCACTTATTACAATATTAGAACATGATAATCCATGATAATCCATGATCTTGGCATGTCTCAATCATGTTTCGAGTGGATTAATGATTAAATGCCTCTGTCTCTGTAAATTTTGTAATGCTGTGTTCTAGATCTGGATGGAATCTTGTTGAGAGTGTTTGAAATTGCAGAGATAGTGGATGAAAATGTGGACATGTGATGAATGTTGATAGGGTCACATGAATAGATACACGTCACATGTTGAAGGGTCACTCATAGATAGATATAGGTAGGTTCATTAGTTCATAATTAATTAGGTACATGACTTTTGGATAATGAATAGTATTGAGAAATGTCTCAAATTACCTATTTATATGTATGTTGGCATTGGTGGAAGAGGTAGAAAATCAATTAAGCATTCATCCATAGTAATACAAAGTTCTCTTCTAACTGCTTGAAGTTAGCACGTTTTACTCTCGTTGAGCCTTGATACTTCCTTCTCATTGAATTTCAGATCTCCTTGGACGTCTTCTTAAGCATTGTTTCCAAGATAGTCCGATCAATGGACTGAAATAAGTAGTTCTTAACCTTTAGGTTCGATCTTGCAGCAACAAGAATGGCAGCAGAAAGAGAAGTTGATAACTTTGTTCAACCCGCCATCCCGAGATTTGATGATCACTATGATCATAGGGCGATGTTGATGGAAAATTTTTTCAGATCAAAGGAGTTCTTTGATATGGTGGAGATGGGTTATGTAAAGCCAAATGAAGGTAAGGTACTCTCAGTTGTTCAACATCAACCGTTGACAACATCAAAGTTGAAGGACTTGAACGTCAAGAACTACTTATTCCAGTCCATTGATCGAACTATCTTTGAAACAATACTTCAGAAGAAGACGTTCAAGGAGATTTTGGATTCAATGAGAAGGAAGTATCAAGACCCAATGAGAGTAAAGCATGCTCAACTTCAAGTAGTTAGAAGAGAACTTTATAGNTTAATATTAAAACCATATACTTTTTCTATCAAATATTAATTAATTAATTTTTTTTACGTATATATATATAGAGAGAGAGAGAGGTAATTTGGGACATTTCCTACTACCATTCATTATCCAAAAGTCATGCACCTAATTAATTATGAACTTGGTGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGATCACAAAGAAAAGGATAGAGAGAATTCAAGGAGAACTCTGGCTAAAAGGATTTTTTATTGATGACTTCAGGCATGTACAACAAGAGAGTACATAAAATAGAGAGTACATTTCAAAGCTTTACTGGACGGGATATATATATGGTTCAATCTACTAAATATAGTTTTACCAGATTTAACCATCTACTATATATAGCTATGTACCATATATAGCTTTACCGGATATAGCTTCACCATATATGGCTTTACCAAATATAGCTTTACCGGATATAGTCATTGACCAAGCTATAAATACAGGGAGCAGACTCCATAACTCAACACTTGGGACATTCCCCACTACCATTCATTATCCAAAAGTCATGCACCTAATTAATTATGAACTAATGAACCTATGAACCTACATGTATCTATTCATACATGACCTTATATATGTATCTATACATGTATCTACAAGTGACCATTCAATACATGTATCTATTCATACATATATCTACAAGTGACCCTTCAACAACGAATGCTTAAAACGTTTACAATAACATTTTGAGTTTTAAAAATAAAAAATAGGTTAAATTACATACATGGGTTCGGTTGAGTTAAAAAAAAATTCTAAAATTTACGAGAACATTTTGTAGTCTTAGTAAGAGGGGAAAGGGTTAAGGATTTACCCGGTATGAGATATCACATTGTTCGAGGAACCCTAGATGTTGTCGGAGTAAAGGAAGGTCAACAAGGGCGTTCTAGTGCGTTGTAGATTCTTATCCAAGACTTCTATCAATTGATGATACCATGTGATAGCTAGAAACATGTAAAGTATATGGCTAGCCCAATAACGAAAGGATCTTCTTTTCAAAGAGATTCGATTCGAAACTCTTATATGTCTAAGGTCCAATATTGAAATAATTTCAGTGGTTTTCCTTGACTTTGTCCGTGGCAACAAACAACTCGAAATGCCTCGACTTTTTTAGAACAGGTCAAAGTCAAATAGTAATAATTCGAAGCTAGTTAGTGAGGTTGGTGACTCAGCGAATAGGGTTTGGGCTTTGTTGACTTTATATATTGACTTCGAACTTTGATGGCCTGTGAGCTCAATCTTTGGTCTTAATCGTTTGGGCTTCAGGTCAAATTATCATTTAAGAAACCTTCCTTTTCATTATTTAAACTTGTGAAAATTTCTAATATTACTATAGTATATACTAATTACATTTCAAAATTGACACGTATCGAACATAGTTAAAATATGCAATGTTCTGACCATAGAAATGAGAATGAACGTATCAATGTATACTAACTGTTAAGTAGATTTAAATGAAAATTGCCAAAAAAAAGATTGATAGACAACAGTATTTTATAATCTATTATAGATATTAAAAATAGTAGCTTCGAAAGAAAAATTCATCACTACGAAGTTTGTAAATATGAAATTAAAGTNAAAAAGCTAACACCATAAAAGTTGAAACACTATATCGTGAATGATACAAGTGACTTTATTGGGAGCTAAGCTTTAGAAGTACCGAGATGTAGAAAACTCCTCTGCCATGAAAAGTTTTAAATCTAAGTTTGAGAACAACAGCAAGTATGAAAGCTATGAGGTGAATTAAAAGTATAGTCATAGTTTGGAGGAGATATTACGATCACGATCAAAGTTTTATAAGTATTTATGGAGATGGACGGTTGAGATATTCAAGATATCTTAAATTTAAGAACAATTTAAGATTGATTTGAGAGTCCAATCAGGCTAAAAAAAAATGTTTAAATGATTAAAAAAATGTTAAAATACCATTTGTTAGTTGAACATGACTATCCACAATGGTATGATATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCAAAAGGGGACTCTTTGTTCGATATTTGAGGATTCTATTGACATGGCTAAGTTTAGGGCATGGCTCTAGTACCATGTTAGTTGAATACGATTCTCCACAATTGTATGATATTATCTACTTTAAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCGTCATACCAATGAAGAGAGTATTCCTTGATTATAAACCCATGATCATTCTCTAAATTAGCGAATCTGGGACTTTCTTCCAACACCTTTCCTCGAACAAAGTACACCTTCCTTTAATTGAGGCTCAACTTCTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGACTTCGAGGAGCCTCGACTCCTTTATTTTTTGGAGTTCTTTGTTTGACATTTGGGGATTCTATTGACATGGCTAAGTTTCGGCATGACTCTGATACCGTGTTAGTTGAACACGACTCTCCACAATAGTACTGTATTGTCCACTTTAAGTATAAGCTTTCATGGGTTTACTTTGGGCTTCCCCAGGAGGCCTCGTACCAATAGAGATAGTATCTTTTGATTATAAACTCTGGTTTTGATTATAAAATGCGCTAGGGTTTGGTGTGGATATTCCATAGGTAGCAGGGGATGTGTGTAGTGTTGGTGAAATCCATTAGGCATTAATTAGGGAATGTTTTTGTAACCTTTTNATATGGAGATACTGTTTCTTTTTCATTTTTTTCTTTTTTAATGATAGGTTCCTAGATTTTAAGTGGCATGTATTTGCATTTCTTAATCCCAATAGTGGAGCTTCTTTAAATATTCAAGTCGTGTGCTACTCCTATTTCAGGTACAGGCAAGGGATTACACTACGGCTAACGATGGTATCGCAACACGATATCATGACACATGCATAGGGTAGATATACTTATTTTCTTATAACTACGGCTAACGATGGTATCGCAACATGATATCATGACACATGCATAGGGTAGATATACTTATTTTCTTATAACTAGGTTAGAATAGGGTGATTTAAATTTAACATTTATTTATTCATTTACTATTTCGTTTTGTTATTTTAAAGATGTTTTTAGAAGTCCATGA

mRNA sequence

ATGCCAGGGCGGGCAATTGAAGTGGAAGTGAAGATCATCGGAGAAGATCAGGCGGTGATCAAAGTTCAAACCAAGAATGTGAGCTATGCCATGACGAAATTAATGGAAGCGCTCAGAGATTTGGAGGTGAAGGTTCACCATGCGAGCATGTCCAATTTACAGGACATGACTCTGGAGGATTTGGTTGGATCTATTACTGAAGAAGATGTTTTTAGAAGTCCATGA

Coding sequence (CDS)

ATGCCAGGGCGGGCAATTGAAGTGGAAGTGAAGATCATCGGAGAAGATCAGGCGGTGATCAAAGTTCAAACCAAGAATGTGAGCTATGCCATGACGAAATTAATGGAAGCGCTCAGAGATTTGGAGGTGAAGGTTCACCATGCGAGCATGTCCAATTTACAGGACATGACTCTGGAGGATTTGGTTGGATCTATTACTGAAGAAGATGTTTTTAGAAGTCCATGA

Protein sequence

MPGRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLVGSITEEDVFRSP
Homology
[Close]
BLAST of Cp4.1LG00g02870 vs. Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-06
Identity = 26/65 (40.00%), Postives = 47/65 (72.31%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G  +EV+VKI+G ++A+I+VQT+NV++  + LM AL +++ +V HA+ S L  + ++D+V
Sbjct: 342 GSDLEVQVKIVG-EEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVV 401

Query: 63  GSITE 68
             + E
Sbjct: 402 VLVPE 405

[Close]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match: A0A0A0LKN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G080170 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.3e-13
Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 1 

Query: 4   RAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 63
           R IE++VKIIG D+AVI+V+++N+SYA+ KLMEALRDLE+KV H SM NL+D+TL+DLV
Sbjct: 231 RGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLELKVEHGSMWNLKDLTLQDLV 289

[Close]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match: A0A0D2U279_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G128800 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-09
Identity = 33/72 (45.83%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 6   IEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLVGSI 65
           ++++VK+ G D A+I+VQ++NV+Y   +LM ALRDLE +VHHASMS + ++ L+D+V  I
Sbjct: 408 LQLDVKVKGNDDAIIRVQSENVNYPSARLMSALRDLEFQVHHASMSCVNELMLQDIVAKI 467

Query: 66  ----TEEDVFRS 74
               T E+  +S
Sbjct: 468 PYGLTSEEAIKS 479

[Close]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match: M5X2D4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-09
Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G  +EVEVKI+G D A+I+VQ++NV+Y   +LM ALRDLE+++HHAS+S + ++ L+D+V
Sbjct: 414 GSGLEVEVKIVGTD-AMIRVQSENVNYPSARLMAALRDLELQIHHASLSCINELMLQDIV 473

Query: 63  GSITE 68
             + E
Sbjct: 474 LKVPE 477

[Close]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match: W9RDL1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023447 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-09
Identity = 35/62 (56.45%), Postives = 50/62 (80.65%), Query Frame = 1 

Query: 6   IEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLVGSI 65
           +E+EVKIIG D A+I+VQ++NV+Y   +LM ALRDLE +VHHAS+S++ D+ L+D+V  I
Sbjct: 444 LEIEVKIIGTD-AMIRVQSENVNYPSARLMGALRDLEFQVHHASVSSINDLMLQDVVVKI 503

Query: 66  TE 68
            E
Sbjct: 504 PE 504

[Close]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match: B9I929_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0014s09950g PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.4e-09
Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G A+EVEVK +G D A+I+VQ+ NV+Y  ++LM ALRDLE +VHHASMS++ ++ L+D+V
Sbjct: 349 GLALEVEVKFVGND-AMIRVQSDNVNYPGSRLMSALRDLEFQVHHASMSSVNELMLQDVV 407

[Close]
BLAST of Cp4.1LG00g02870 vs. TAIR10
Match: AT4G00870.1 (AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 8.3e-08
Identity = 26/65 (40.00%), Postives = 47/65 (72.31%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G  +EV+VKI+G ++A+I+VQT+NV++  + LM AL +++ +V HA+ S L  + ++D+V
Sbjct: 342 GSDLEVQVKIVG-EEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVV 401

Query: 63  GSITE 68
             + E
Sbjct: 402 VLVPE 405

[Close]
BLAST of Cp4.1LG00g02870 vs. TAIR10
Match: AT1G32640.1 (AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 47.4 bits (111), Expect = 4.5e-06
Identity = 25/54 (46.30%), Postives = 41/54 (75.93%), Query Frame = 1 

Query: 6   IEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLE 60
           +E+EVKIIG D A+I+V++   ++   +LM AL DLE++V+HASMS + D+ ++
Sbjct: 546 MEIEVKIIGWD-AMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQ 598

[Close]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match: gi|700206198|gb|KGN61317.1| (hypothetical protein Csa_2G080170 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-13
Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 1 

Query: 4   RAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 63
           R IE++VKIIG D+AVI+V+++N+SYA+ KLMEALRDLE+KV H SM NL+D+TL+DLV
Sbjct: 231 RGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLELKVEHGSMWNLKDLTLQDLV 289

[Close]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match: gi|659082631|ref|XP_008441948.1| (PREDICTED: transcription factor MYC4-like [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-11
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = 1 

Query: 4   RAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 63
           R IE++VKIIG D+AVI+V+++N+SYA+ KLMEALRDL +KV H SM N +D+TL+DLV
Sbjct: 228 RGIEIDVKIIGGDRAVIRVESRNLSYAVAKLMEALRDLGLKVEHGSMWNWKDLTLQDLV 286

[Close]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match: gi|743790502|ref|XP_011039024.1| (PREDICTED: transcription factor MYC2 isoform X1 [Populus euphratica])

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-09
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G A+EVEVK +G D A+I+VQ+ NV+Y  ++LM ALRDLE +VHHASMS++ ++ L+D+V
Sbjct: 412 GLALEVEVKFVGND-AMIRVQSDNVNYPASRLMSALRDLEFQVHHASMSSVNELMLQDVV 471

Query: 63  -----GSITEEDV 71
                G  TEE++
Sbjct: 472 VRVPDGLRTEEEL 483

[Close]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match: gi|743790522|ref|XP_011039030.1| (PREDICTED: transcription factor MYC2 isoform X2 [Populus euphratica])

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-09
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G A+EVEVK +G D A+I+VQ+ NV+Y  ++LM ALRDLE +VHHASMS++ ++ L+D+V
Sbjct: 412 GLALEVEVKFVGND-AMIRVQSDNVNYPASRLMSALRDLEFQVHHASMSSVNELMLQDVV 471

Query: 63  -----GSITEEDV 71
                G  TEE++
Sbjct: 472 VRVPDGLRTEEEL 483

[Close]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match: gi|470141822|ref|XP_004306627.1| (PREDICTED: transcription factor MYC2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-09
Identity = 31/65 (47.69%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 3   GRAIEVEVKIIGEDQAVIKVQTKNVSYAMTKLMEALRDLEVKVHHASMSNLQDMTLEDLV 62
           G  +E+EVKI+G D A+I+VQ++NV+Y   +LM A+RDLE ++HHAS+S++ D+ L+D+V
Sbjct: 408 GSGLEIEVKIVGTD-AMIRVQSENVNYPSARLMTAMRDLEFQIHHASLSSINDLMLQDIV 467

Query: 63  GSITE 68
             + +
Sbjct: 468 VKVPD 471

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g02870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH014_ARATH1.5e-0640.00Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1[more]
BLAST of Cp4.1LG00g02870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKN8_CUCSA3.3e-1367.80Uncharacterized protein OS=Cucumis sativus GN=Csa_2G080170 PE=4 SV=1[more]
A0A0D2U279_GOSRA6.4e-0945.83Uncharacterized protein OS=Gossypium raimondii GN=B456_008G128800 PE=4 SV=1[more]
M5X2D4_PRUPE6.4e-0950.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1[more]
W9RDL1_9ROSA6.4e-0956.45Uncharacterized protein OS=Morus notabilis GN=L484_023447 PE=4 SV=1[more]
B9I929_POPTR8.4e-0956.67Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0014s09950... [more]
BLAST of Cp4.1LG00g02870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00870.18.3e-0840.00 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G32640.14.5e-0646.30 Basic helix-loop-helix (bHLH) DNA-binding family protein[more]
BLAST of Cp4.1LG00g02870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206198|gb|KGN61317.1|4.7e-1367.80hypothetical protein Csa_2G080170 [Cucumis sativus][more]
gi|659082631|ref|XP_008441948.1|1.5e-1164.41PREDICTED: transcription factor MYC4-like [Cucumis melo][more]
gi|743790502|ref|XP_011039024.1|4.1e-0952.05PREDICTED: transcription factor MYC2 isoform X1 [Populus euphratica][more]
gi|743790522|ref|XP_011039030.1|4.1e-0952.05PREDICTED: transcription factor MYC2 isoform X2 [Populus euphratica][more]
gi|470141822|ref|XP_004306627.1|7.0e-0947.69PREDICTED: transcription factor MYC2 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02870.1Cp4.1LG00g02870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11514MYCcoord: 3..62
score: 7.1
NoneNo IPR availablePANTHERPTHR11514:SF40TRANSCRIPTION FACTOR BHLH14coord: 3..62
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g02870CsaV3_2G010120Cucumber (Chinese Long) v3cpecucB0008
Cp4.1LG00g02870Bhi06G000914Wax gourdcpewgoB0009
Cp4.1LG00g02870CsGy2G007950Cucumber (Gy14) v2cgybcpeB153
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None