Cp4.1LG00g02660 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g02660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Syntaxin 61 family protein
Location	Cp4.1LG00 : 8391007 .. 8399867 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGTCAGCGTAGATCTTAACCGTCACCTCATACTCTCAGAAGATTCCAGCTTAATCCCCACCCCATATCCTCTCTCATTTCTCTCATCAGTCTTCGTTCGTTAGATCTCATCACGCGATTGGGTTTTTCGCGTTCTGGCAAGTATCCTTTTCCTTCTGGATTCTCGATCCACTTCCTTTTGATCGTGTTCTTGGCCTTCGATTTGTGATTCTTTTGGTTTCTGGATTTTGTTTTCTGGTTCGTCTTTTCCTTCCTTTGATTAATGGTTTTTGTGTATTTGGTCTGACGACGGTGGGAGATTGATCGTTCTGTTGAGGAATAGATAGGGTTTTGTTCGTCTGCTGGATTGTTGTCTTTTCCTTTATCTTGTTTAGGGTTGTTTTTCCTTACGAGATGCGTTTTCTTTCTCGAACGGTAGAGATTTATGCACCCAAAGGAATCCGTTCTCACAATCAATTTTCTTGAAAAAGTTAGGAAAGCAAGGTTAATAGTCAATGTTGTCTGGTACCTATCGGACTAATCTTGGTTTTAAAGACACTGAACTCTAGGGAGTGATGCTTCTCTGTGATCTTGATCTTGAACTTTGCCCTGTGGACTGGCCACCTACTTAGGATTCGATATTCTACAAGGTGTCCACAGGCTGACCCAAATTAAATTTGTATCTATTGATTATTAGGGCATACAAATTTTACAAGTCCAATCTGTTTTCTCTGCGATTGAGAATGAAATTAAGTTGATTTGAGGGTGTGAGAGTTCTGTTTTTCTTTCATTCAGTTAACTGCAGACAAATATTGATTTCTGGAATTCATTGTGTTAATTTTTATTAATTGCAGTTGAATATGCCATCGGCTCAAGATCCGTTTTATGTTGTAAAAGATGAGATTCAAGAATCTGTAAGTTTGTTGCTTGCATCCAGTTATGATTGTCTGTAGTGCTTGAATTATGCTCGCATTGTCATTTACATTAAGCTTCTTGAACCTATGTTTTTGTTTATCTGCAATATTTAATTGGTTGTTTAAAGCTAAAGAATGTGAATTAGAACAGGAAAACTGGAGAGTGGAAATAGCGAGACAAACTTGTGACTATGCTTGCTTGCTGCAAAAAGAACCCTCGTCAACATACGAGACATAATGAAAGTTGTTACACGAATATATGAAATATAAATCTAACTAGATCTCGGATGTCCAATGTGGAGATAGAATGCACGTTAAATCACAACTCCCAAGATGAACATTTAGCAACTATCAGTGATTGAAATTTTTTGTGAAAGAAAAAATATGGATGTAAATTCATCCTTTTTCTTCATAAGTTGACATCTTTCCGATCTTATTGAGATTTTTCTTTATCTCTAAAAATCTACCTTGTCCTTTGTATTTGTCACTAATATTCTGTGAGATGATAGCCACAGGCCAATATACAACCTTCCATTTGAAAAGTTCATCTTCAAATTATGAACAGTTAAGTTAAACATGACATCTCAATACCATATTGGATGTTCGTTAATTGTTCAAAGAGGCTTATGAGGATGGTGTTTATATGATGGGTGTTGATGATACCGTGGGGGTTTTTTTGGAGAGTGAAGTGGGGAAGGCACCTGGACAGTTAAACATGACATCTCAGTACCATATTGGATATTCGTTAATTGTTCAAAGAGGCTTATGAGGATGGTGTTAATATGATGGGTGTTGATGATACCGTGGGTTTTTTGGAGAGTGAAGTGGGGAAGGCACCTGGACAGTTTGAGTGGGTCAAAGGGAGGGCTACCCGTCTGATCCTTGAAGTGTTAGTTATTCTGAAGATGAATACTTTTTATCTTCTCCAATGTTGAAGGATCAAGACTTCCCTAGTTGGGTTAAATGTTTGAAGTGGGAGGGAATAAGAAGATTGATGATAGTGTAGTTTCCCTGAGCAAATTCTATCTATTAGTTTAATGCCCCATGATATTCGTGAAGTTAATTAGGAGGGGTTAATGTAGAGGAATAGTGAAAGCTTGTCTTTGGAAGGGCATGAATGCAGAGGAGCAGTGAAAGTTGTCTTTGGATGGGCACAAATGTAGAGGAGTAGTGAAAGCTTGTCTTTGGAAGGGCACAACAGGGTGTGCTTGATCCCAACAGTCCCTCTCTAATTGTTCCTTGGGGTTAGCTTTGAAGTCTCACCCAATTAGGCATGTTTTCCTTCGTCTGCATTTTGTCCTAAGTGTTGAAACCTTGTCTTTGGAAGGTAACAACAAGGTGTGCTTGATCCCAAAAGTTCCTTACCAATTGCTCCTTGGGGTTAGTTTGAAGCCTCAGATAATCAGTACATTTTCCTTTAGATTTTTTGCCTTACACATTTAATGTGAGAGAGAGGAAGGTGGCTGGATCTGGGCCTTTTTCTCCTTACTTGCCATTGGGGTAGGAATCAGTTTGGATGTCTTTCTCATCCATTTCCTCCATTTCCTCCTCACTTCCTTAATCCTTTCCCTATTTATAGTTTTATTGTGCCTCATCAAGTCGTTACTTAATTGTGAGAGAGGTTTGTTCTATTTTCTTTGCCTTGTGTTTAGCTTCTTTGGCTTGTGTTGAGGGTAGAGGATGATTAGTGGAGGGAGTTCATTTGGTAGCCTTAGAGGGTGTTATGAGAGATCCTTTTTATTGTGTTTAATCAACTAGGTATTCTCGATGTGTCATTAATGGAGGTTATTATTTTCATTGGTTGTTGATGTGTGCCCTTTTAGCTTCAGCTGGCATGCATGTGCTATCCATAGAGGGTCCTTTGTTGGGTGGCAAGGTTCCTCTCCCAATTTAGGTTTGTAGGTAAAGATGAAGTAGGAGGAAGCAAAAGGGGGATAGAGGGTTTGGCAGTTAAAAAATTTGGGGCGTTCCCTAAATTAGAAGGGAATAAAGGTAGTTCTTTGAGGTTTTAAAATGAAGGTGATCTCTTTGAACATTAGAGGGTTTAAGCAAGGTATAAAATAGATTGGTTAGGGAGTTTATTACTAAGGAGAATCCAATCATTGTTGTTTTGATCGAAACTAAGTATATGAACTTTTGAGGAGTCCTTAGGGAAGAAGGTAGGATGGGGTTATTTGGCGACCTTGGGTGCCTCTAGGGGTATTGTTATGATGTAGGATGTTAGTGTTGTTAAACCTCTTGAGGTGGAGGGGTGGGTGACGACAGTGTATGGCCCTTTGAGATAGAGGGCTAAGAAGGAATTTCAGGAAGAGGTGGGTTGGCTCTTTGGCTTGTGTGGGGTGTTTGGTAGGGGACTTTAATGTTTTTGATTTCCTCGAGGGAAGGTGTTAAGGAGGAAGAATAACCCGGTCTGTGAGACATTTTAATGTTTTATTGAGGATTGCCTTTTGTTTCCATCCACCCTTAGTTAATGGGAATTTTACTTGATCCAACCGCTTGCTTGAAGTTGGATTGGTATGTTCTCGTCATTTAAAGAGTGGATAGATGCTTTTATTAATGCGAGGTGTCACAATCACACTCTTGTGGCAGTGGGACAACGATTGTGCGACACTCGTTCTAACCTGTCGAACAAGTTAGTTGTATGAAAATCGTAAGTCGCGGAAGATTCAAATGTATGATTGAACCTTGGTCACATTCTGAGAAAGCATTTTAGAAAACGTGAGTGAGGAAATGTGTTGAAAACAATTTGTAAGAATTGTAAGTGGAGTTCTTGTTTTAAACTCTCCCAAGTGTCCATGGTACATTGGCCATATTGAATGTGGGTACTTGGATCTCCACCACAACTTTGCATCATTAGATGCATTATGGCCAACATGACCTTCGCCTCTTCTGCCACAGTATTTGTGGCTTAAAGTATTGTTCAAAGTCTAAGATAAAATTCTCTAAACCTTAGTGTCTCGAGCCCCACATAAGTGCTTAGGCTTTGAGACCTTCACTTTGTTAAACTAGACCGCACCCCAAGTTGGAGTTTGGTTCCCTACCGCTTTCATAGTGAGGTTTAACTTGGCGCTCAAATCTGCCACTTCAGCCTTGACTATTCCAAGGGAATCTCAAATCCTCAGACATTTTTGAGATAATCTGAATGATTGCTTGTTCGGCATTGTCTAGGCCCTCGATACATTCTTCCATTTGGGCGATAAGAGCATGTTGATCTATTCCCACGCTTGAAGTCACCAGTAGTTGTGACTGTCTTTTAAGGCCTTGACCCTAACCATTAATTCATGGACCGACATTGCCTCAAGGCGGCTTGCCATTTCATTGATCCTGTTTACTTTAGCGGCACTCTCGTTCATGTGGGACTCCAAAAGCCTCATTCCCTTAAGAACTTCACTAATGTAGAGCAAGTGATCTTTGATCTCTACCAATCGGTTAGCTCGGGACTTACCCAATTGTTTTGCAGTGGACATGTTTCAATACTAGGAGCGAACTTGGCTCGGATACCACTTGTCTCAATCGCACTCTTGTGACAGCGGGACATCGATTAAACGACACTTGTTTCAACCTGACAAACAAGTCAGTCGTATGAAAATCGTAAGTCGTAGATAATTCGGTTCTATGATCGAACCTTGGTCATGTTTGAGAGAGCATTTTAGAAAACATGAGCGAGAAATGTGTTGAAAACAATTTGTAAGAAAGCAATGTTATAGGCTAAAAACAAATAAGCAACAACCATTGCTTTTATAGCATATAACCTAGGTAGGAAGAATTGACGATTAGTCACATCCCTTATAATACATATTGGGGCATTTTAACTTTGGCGGGTGTAGACCTGATTTTGGTGAACAATCATGCACCCCCGTATTGTTACGATAGGAATAATAGAAACCTAACTATACATGAAAACAAGTAAAAGGGGTTTGGAACGGGCATGTGGTCATGGACAACACATCATGGACAAACATGACTGAGACATCCGACATGCGGCCACAAGCAACATACATGGGACAAACATGATCGTTACATGAGGCATGTTTTGGGGCTTAAAGTTGCTTTGGACCATTGGTGGCATTGTTTGGACTCAGGTCTTTGAGTTAGGCCCCATATCCTTTCAGGTTTGAGAATATGTGGGTTGTCTCACCCTTACTTTACAACCTCATTCTCGTGGTGTTGTTAGGTTGAGGCTCTAGAAGGAAGCTGTGCGCACTCAAAAGGGGGTGTTGAAGTCTAGGAGTAGAGACATTTTTGGGGATGAGGGTCAAGAAGGAAGATGTAGTGCTTAATGATACTCTTATGGAAGAGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAGACTGGAAAATGAGTGTTGGAAAAGAAAAAAAGAAAAAAAAGGAAAAAAAAAAAAAGGGAAGAAAAAACAATGTCTAGTGAGCTAGTGATGTAATCTGGCCTATTTTCACGGACAAGAACTTTGTTGGCTCCATTGAGAATGAGGCCAAGGTGGTGTTGAAAAGGGACTAGGGGATTGAGGGGGAAGTGCTCCTTTTTTTTTCTTTCTTCTCTATATGATCGTGTAGTGGCTCTCAAAGCTTTTCTAGAGGACGTGGATTGGAGTGTAGACTAAGCTATGTTGGACTCTCACTTCTCAATGGGAGGAAGTTAGAAGGATGGTTCTTGGGAAACGTTGCTCTATGTCTCCATGTGTTTTCTTATGATCTTTCTCCAAGATAATTGAGAGTTTATCAAGGACTTTTGAAGATTGCTCAGATGAGTTCTTTGAGAGTGGCATTTTGGGTAGAACTTTACATAAAACTTTTGTTTGCCATATTTTGAAGAAGGATAGACTATGAGGTTCGAGATTTTCGGTCTATCAGCCTCATGACTAATGTGTATAAGATGAGAAGATCTTTGCCAAGGTGTTGGTTGATTGACTTAGAAAGGTTCTCCCCATGACAATTTCAGAGCAAAGCCTACAGCTAATGAGGCTATTGAGGATTATAGATCCCATTAGTGGGAAAGGGGTCATCTTTAAGATTGATTTTGAGAAGGCTTATGATCGTGGATTGAGATTTTTCTTGTAGATCGTTGTGAAGAAGGGGTTTGGGTATAAATGGACATTGTGGAATTGTGACCTTCTCTCTCATTTTCTTTTCCTCTTTGTAGTGGACATCGTAGTAGAGTTATTACAAAATGATTGTAGGGTAACATTCAGCAGGGGTTTTAGATTGGAAGGATAGAGTGGCCTTGTTTTACTTTAATTTGTTGATGATACAATTTTTTCTGTCTCGAAAGGAGGGATCTTTCTTAATTTGAATCAAAACTTAATATTTTTAGGGTATTTTAGTTCTTAGGATTGATAACGCAAATGTTAGATCTTAAGTTAATTCTACTAAAATTGGGCAGATGGGTGACCTTTGTGGGGTGTGAGGTCAGAGCATTTCTTAAGCCTAGGAGCCTTATGTTTTAGGACCCTGTCGAAAGAAAGATTTGAAGGAGATTCGCATCTTGGAGGAAAGGTTTTTTCTTCAACGGTGAGACAGCCTAAATGGTATCCCGATTACTATATGTGATTGTTTAGAGTGCCTAGTGCAATAAGCGAGACAATTGAGAAATTGATGAGAGATTTCTTATTGGGAAGGGGTTGATGAGGAGGAAAATTTTGAACTTTGTGAGCTGGGAGGTGGTTTCTTAATTGGTGGACCTCGGGGGGGTGTAGGCACAGGTTGAACGTAAGGACTAGAAGCAAAGCCCTGTTGGCTAAATTGCTTTGGCAATTCCAGCATGATTTTTATACCTTATGGCATAATATCATTGTAAGTAAGTACAAATTCTCATCTTTTTGAATATACCAATGGTGAGGTTAGAGGCTCTTCTAGAAACCCATGGGGAAGATTGGAGAGATTGGAGAGATACTTATTGGAGGATAGATGTTTTTAAAGTCTATGTTTTTCTGCCATTTTGTTTGGTAACATGTGCATTTTCTTATAATGTGATTTTTCATCCTATTAGATCGATAAACTGCAATCAAGTTTTCACCAATGGGAAAGGATATCTTCCGATCTAGGAGAGAGAGTACAACTCACAAAAGAGTTGCTCGCTGCCTGCGAGAGCATTGAATGGCAGGTAAATTCTCAATTTTTAAACCATCATGTCCGCTTCTTTTATTTGTTGTGAACCTTTTTTTTTTTTTTGAATTATATCGAAAAGATTGGATAGCATTTGTTCTGACTTTTAAGCATTGTAAATGATTCAATATGTTGCAACTGGTGCTCCTAATTTTGACTTGTAACATAAACTTTCTCTGAAAGTCAGCTTTCTTGATAGGAAGGTGGATGAACTGGACAAAGCTATTGTTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATGATGCAGAACTTGAAAGACGAAGGAGATGGACGAGTACAGCTAGGACACAGGTGAGCCTTTTTTTTGTAATCTTTGTTTCTTTCCATATAGTTGCATGTGCTTCTTGTTTATTGTAATGACTCAAGATATTCAGGAATGCGTCAGTTCTTCTAAATAGCTTGAACAAAGCATCTTCTATGTATTTACGTTTCTTTTTGATACTTTATTAGGTTGGAAATGTCAAGAAAGTAGTGGGAGCTGGAAAGGAGCAAGCTGGAACTGCTAGTTCTAATGGGATGCGTCGAGAATTGATGAGATTACCAAATCCGCACGAAACAGACAGATCAAACTTATATACAGCCCACCAAGCGAATGATGACTTCATCACATCTGAATCAGATCGACAGCTGCTTCTCATAAAGTAACGTTTGTGCATCTTAATTTGGTTGTTATCTGAATCCTTCCTGCTTAAAGTATAATGATGAAGTATCAAAACAACAGAATAAAATGAGATGTCATTGTTCGTTAGCACTTTTCCGTCCAAACCTGGGGCTGTTTATGTGGAGTACTTGTTTGCTCACCTGGATTTTGTTTCCCTGTTGAATTTAATATAGGCGGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCAAATTGCAGGTGTAGATTTTGTAGGCTGCAGTGCTGCCAATTGATTCTGTTATACATAAGCAATCTGGTTCGATTTTCTAAAACTTGAAAAAAATCTGTGCAGGATAAAATTATTGACGATCTTGGAAATGAAATGGACAGTACATCAAATCGCCTCGATTTTGTTCAGGTGTGTTCATTATCTCAATGCTTGCCATATGCACAAAATCACCTTCAAGTTTCCAATAATAAAGATTAAACCTTTTTTGTATTGACTCTTACAGAAAAAAGTAGCTGTTGTCATGAAGAAGGCCAGCGCCAAGGGCCAGCTAATGATGATCTTGTTCTTGGTGGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGTCTTTGAATCAAAATGAGACCCTTGCCATTCACGATGATGGATCAGAAATGGATATGTTAAACCAGAAGATGAGGTACTTTATCCGCATATCGTCAAAACTATCCCGAAATTTTGAATTGAGAACTACATTGGGTTGATCAGAATTCAGAACCGAGCTTCTGAATTACAAAATGCAATGTGAAACTCATTTGCACTTGCTCCTTATCCTTGTTTTATAGTTTTTTTTTTTTCCTTTTCTTATTATTATTGTTTTTTTTATAGTTCGTTTACCTTAATTTCGTGTAATTATAGAGATCTACACAGATTATGATAATTTGAACAATCACTATTTCTATTGCCTTTTCGTCACTCTGTATATCTCGCACGACATACACTTCTGAGGACATATTTGGCAGTGGTTTTATAGAATAACCAAAATCACTTCATTTCTCATGTTGTTTATGTTGCATACATATGTACGCCTCACCAATCATGAAGATATTTTAGGATGAC

mRNA sequence

CATGTCAGCGTAGATCTTAACCGTCACCTCATACTCTCAGAAGATTCCAGCTTAATCCCCACCCCATATCCTCTCTCATTTCTCTCATCAGTCTTCGTTCGTTAGATCTCATCACGCGATTGGGTTTTTCGCGTTCTGGCAAGTATCCTTTTCCTTCTGGATTCTCGATCCACTTCCTTTTGATCGTGTTCTTGGCCTTCGATTTGTGATTCTTTTGGTTTCTGGATTTTGTTTTCTGTTGAATATGCCATCGGCTCAAGATCCGTTTTATGTTGTAAAAGATGAGATTCAAGAATCTATCGATAAACTGCAATCAAGTTTTCACCAATGGGAAAGGATATCTTCCGATCTAGGAGAGAGAGTACAACTCACAAAAGAGTTGCTCGCTGCCTGCGAGAGCATTGAATGGCAGGTGGATGAACTGGACAAAGCTATTGTTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATGATGCAGAACTTGAAAGACGAAGGAGATGGACGAGTACAGCTAGGACACAGGTTGGAAATGTCAAGAAAGTAGTGGGAGCTGGAAAGGAGCAAGCTGGAACTGCTAGTTCTAATGGGATGCGTCGAGAATTGATGAGATTACCAAATCCGCACGAAACAGACAGATCAAACTTATATACAGCCCACCAAGCGAATGATGACTTCATCACATCTGAATCAGATCGACAGCTGCTTCTCATAAAGCGGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCAAATTGCAGGATAAAATTATTGACGATCTTGGAAATGAAATGGACAGTACATCAAATCGCCTCGATTTTGTTCAGAAAAAAGTAGCTGTTGTCATGAAGAAGGCCAGCGCCAAGGGCCAGCTAATGATGATCTTGTTCTTGGTGGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAGTCTTTGAATCAAAATGAGACCCTTGCCATTCACGATGATGGATCAGAAATGGATATGTTAAACCAGAAGATGAGGTACTTTATCCGCATATCGTCAAAACTATCCCGAAATTTTGAATTGAGAACTACATTGGGTTGATCAGAATTCAGAACCGAGCTTCTGAATTACAAAATGCAATGTGAAACTCATTTGCACTTGCTCCTTATCCTTGTTTTATAGTTTTTTTTTTTTCCTTTTCTTATTATTATTGTTTTTTTTATAGTTCGTTTACCTTAATTTCGTGTAATTATAGAGATCTACACAGATTATGATAATTTGAACAATCACTATTTCTATTGCCTTTTCGTCACTCTGTATATCTCGCACGACATACACTTCTGAGGACATATTTGGCAGTGGTTTTATAGAATAACCAAAATCACTTCATTTCTCATGTTGTTTATGTTGCATACATATGTACGCCTCACCAATCATGAAGATATTTTAGGATGAC

Coding sequence (CDS)

ATGCCATCGGCTCAAGATCCGTTTTATGTTGTAAAAGATGAGATTCAAGAATCTATCGATAAACTGCAATCAAGTTTTCACCAATGGGAAAGGATATCTTCCGATCTAGGAGAGAGAGTACAACTCACAAAAGAGTTGCTCGCTGCCTGCGAGAGCATTGAATGGCAGGTGGATGAACTGGACAAAGCTATTGTTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATGATGCAGAACTTGAAAGACGAAGGAGATGGACGAGTACAGCTAGGACACAGGTTGGAAATGTCAAGAAAGTAGTGGGAGCTGGAAAGGAGCAAGCTGGAACTGCTAGTTCTAATGGGATGCGTCGAGAATTGATGAGATTACCAAATCCGCACGAAACAGACAGATCAAACTTATATACAGCCCACCAAGCGAATGATGACTTCATCACATCTGAATCAGATCGACAGCTGCTTCTCATAAAGCGGCAGGACGAGGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACATGAAGAGCTCAAATTGCAGGATAAAATTATTGACGATCTTGGAAATGAAATGGACAGTACATCAAATCGCCTCGATTTTGTTCAGAAAAAAGTAGCTGTTGTCATGAAGAAGGCCAGCGCCAAGGGCCAGCTAATGATGATCTTGTTCTTGGTGGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAG

Protein sequence

MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDELDKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILFVLVFLT

Homology

[Close]

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-87
Identity = 171/246 (69.51%), Postives = 204/246 (82.93%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQ+SIDKLQS+FH+WERIS D+G++  + KEL+A C SIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           +KAI VAA+DPSWYGID+AELE+RRRWTS ARTQV NVK  V AGK  +G   ++ +RRE
Sbjct: 61  EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMR+PN  E  R + Y     +D F+ SESDRQ+LLIK+QDEELDELS SV+RIGGVGLT
Sbjct: 121 LMRMPNSGEASRYDQYGGRD-DDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IH+EL  Q++IID+L  EMDST NRL+FVQKKV +VMKKA AKGQ+MMI FL+ LFIILF
Sbjct: 181 IHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 245

[Close]

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot
Match: STX6_MOUSE (Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 76/252 (30.16%), Postives = 131/252 (51.98%), Query Frame = 1


Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERI----SSDLGERVQ-LTKELLAACESIEWQV 62
           S +DPF+VVK E+Q++++  Q  F +W  +    S+   E +   T EL     SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGM 122
           ++LD+ I +   +P  + +D  EL  R+ + ++ R  V ++K  + A   QA     N  
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSASSVQALAERKN-- 121

Query: 123 RRELM-----RLPNPHETDRSNLYTAHQ--ANDDFITSESDRQLLLIKRQDEELDELSAS 182
           R+ L+     +  N    DR          AN  FI  +  +Q L++++QDE+L+ +S S
Sbjct: 122 RQALLGDSSSQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGS 181

Query: 183 VERIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMIL 242
           +  +  +   I  EL+ Q  ++DD  +E++ST +RLD V KK+A V    S + Q   I 
Sbjct: 182 IGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIA 241

[Close]

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot
Match: STX6_CHICK (Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 74/250 (29.60%), Postives = 127/250 (50.80%), Query Frame = 1


Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERISSD--LGERVQL---TKELLAACESIEWQV 62
           S +DPF+VVK E+Q++++  Q  F +W  +  D  +  R ++   T EL     SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSIATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSN-- 122
           ++LD+ I +   +P  + +D  EL  R+ + ++ R  V  +K  +     QA     N  
Sbjct: 62  EDLDETISIVEANPRKFNLDATELGIRKSFITSTRQVVREMKDQMSNSSMQALAERKNRQ 121

Query: 123 ---GMRRELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVE 182
              G          P +  R +      AN  FI  +  +Q L++++QDE+L+ +S S+ 
Sbjct: 122 ALLGESSSQSWSSGPDKYSRLDR-ELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIG 181

Query: 183 RIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFL 242
            +  +   I  EL+ Q  ++DD  +E+DST +RLD V KK+A V    S + Q   I+ L
Sbjct: 182 VLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLAKVSHMTSDRRQWCAIIVL 241

[Close]

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot
Match: STX6_HUMAN (Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 72/252 (28.57%), Postives = 129/252 (51.19%), Query Frame = 1


Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQ-----LTKELLAACESIEWQV 62
           S +DPF+VVK E+Q++++  Q  F +W  +  D     +      T EL     SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGM 122
           ++LD+ I +   +P  + +D  EL  R+ + ++ R  V ++K  +     QA     N  
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKN-- 121

Query: 123 RRELMRLPNPHE--TDRSNLY-----TAHQANDDFITSESDRQLLLIKRQDEELDELSAS 182
           R+ L+         T  ++ Y        +AN  FI  +  +Q L++++QDE+L+ +S S
Sbjct: 122 RQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGS 181

Query: 183 VERIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMIL 242
           +  +  +   I  EL+ Q  +++D  +E++ST +RLD V KK+A V    S + Q   I 
Sbjct: 182 IGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIA 241

[Close]

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot
Match: STX6_PONAB (Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 72/252 (28.57%), Postives = 129/252 (51.19%), Query Frame = 1


Query: 3   SAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQ-----LTKELLAACESIEWQV 62
           S +DPF+VVK E+Q++++  Q  F +W  +  D     +      T EL     SIEW +
Sbjct: 2   SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDL 61

Query: 63  DELDKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGM 122
           ++LD+ I +   +P  + +D  EL  R+ + ++ R  V ++K  +     QA     N  
Sbjct: 62  EDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKN-- 121

Query: 123 RRELMRLPNPHE--TDRSNLY-----TAHQANDDFITSESDRQLLLIKRQDEELDELSAS 182
           R+ L+         T  ++ Y        +AN  FI  +  +Q L++++QDE+L+ +S S
Sbjct: 122 RQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGS 181

Query: 183 VERIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMIL 242
           +  +  +   I  EL+ Q  +++D  +E++ST +RLD V KK+A V    S + Q   I 
Sbjct: 182 IGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIA 241

[Close]

BLAST of Cp4.1LG00g02660 vs. TrEMBL
Match: B9H2P0_POPTR (Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0004s05020g PE=4 SV=2)

HSP 1 Score: 382.1 bits (980), Expect = 5.1e-103
Identity = 208/248 (83.87%), Postives = 226/248 (91.13%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSD GE+V+LTKELLAACESIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKE--QAGTASSNGMR 120
           DKAI VAARDPSWYGID+AELE+RRRWTSTARTQVGNVKK V AGKE   +GTAS NGMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVG 180
           RELMR+P+  +TD+SN YT  Q NDDFI SESDRQ+LLIK+QD+ELDELSASVERIGGVG
Sbjct: 121 RELMRMPDAQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVG 180

Query: 181 LTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFII 240
           LTIHEEL  Q++II DL  EMD+TSNRLDFVQKKVA+VMKKASAKGQLMMILFLV LFII
Sbjct: 181 LTIHEELLAQERIIGDLDTEMDTTSNRLDFVQKKVAMVMKKASAKGQLMMILFLVVLFII 240

Query: 241 LFVLVFLT 247
           LFVLVFLT
Sbjct: 241 LFVLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. TrEMBL
Match: U5FVV6_POPTR (Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0011s05870g PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-100
Identity = 202/248 (81.45%), Postives = 221/248 (89.11%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERIS D+G++V LTK+LLAACESIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISCDMGDQVHLTKDLLAACESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQ--AGTASSNGMR 120
           DKAI VA RDPSWYGID+AELE+RRRWTSTAR QVGNVKK V AG+E   +GTAS +GMR
Sbjct: 61  DKAISVAGRDPSWYGIDEAELEKRRRWTSTARNQVGNVKKAVVAGREVNISGTASVSGMR 120

Query: 121 RELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVG 180
           RELMR+PN  + D+SN YT  Q NDDFI SESDRQLLLIK+QDEELDELS ++ R+GGVG
Sbjct: 121 RELMRMPNSQQADKSNQYT--QDNDDFIQSESDRQLLLIKQQDEELDELSITIGRLGGVG 180

Query: 181 LTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFII 240
           LTIHEEL  Q+KIIDDLG EMDSTSNRLDFVQKKVA VMKKASAKGQLMMILFLV LFII
Sbjct: 181 LTIHEELLAQEKIIDDLGMEMDSTSNRLDFVQKKVATVMKKASAKGQLMMILFLVVLFII 240

Query: 241 LFVLVFLT 247
           LFVLVFLT
Sbjct: 241 LFVLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. TrEMBL
Match: M5WIL7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010587mg PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.0e-100
Identity = 202/246 (82.11%), Postives = 217/246 (88.21%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           MPSAQDPFYVVK+EIQESIDKLQSSFHQWERISSD GE++ LTKEL+A C SI+WQVDEL
Sbjct: 1   MPSAQDPFYVVKEEIQESIDKLQSSFHQWERISSDTGEQLHLTKELIATCGSIDWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           DKAI VAARDP+WYGID+ ELE+RRRWTSTAR QVG VKK V AGK+  GT S NGMRRE
Sbjct: 61  DKAISVAARDPTWYGIDEVELEKRRRWTSTARAQVGAVKKAVEAGKDSTGT-SVNGMRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMRL N  ETDRSN Y A Q NDDFITSESDRQLLLIK+QDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLANSQETDRSNQYAA-QHNDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IHEEL  Q+KI+D+LG EMDSTSNRLDFVQKKVA VMKKA  KGQ MMI+FL+ LFIILF
Sbjct: 181 IHEELLAQEKIVDELGMEMDSTSNRLDFVQKKVATVMKKAGVKGQCMMIVFLLVLFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 244

[Close]

BLAST of Cp4.1LG00g02660 vs. TrEMBL
Match: A0A061GE34_THECC (Syntaxin of plants 61 OS=Theobroma cacao GN=TCM_029787 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.2e-98
Identity = 195/246 (79.27%), Postives = 216/246 (87.80%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M  AQDPFY+VK+EIQ+SIDKLQ SFHQWERI  D GE+V LTKELLA CESIEWQVDEL
Sbjct: 1   MSKAQDPFYIVKEEIQDSIDKLQLSFHQWERIPPDTGEQVHLTKELLANCESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           DK I VAARDPSWYGID+ ELE+RRRWTSTARTQVGN+KK V AGKE   TA +  MRRE
Sbjct: 61  DKTISVAARDPSWYGIDEVELEKRRRWTSTARTQVGNIKKAVVAGKENGNTAIA--MRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMRLPN H+ DRSN Y+A + NDDFI SESDRQ+LLIK+QDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNSHQPDRSNQYSA-EDNDDFIASESDRQMLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IHEEL  Q+KI+D+LG EMDST+NRLDFVQKKVA+VMKKASAKGQ+MMILFL+ LFIILF
Sbjct: 181 IHEELLAQEKIVDELGTEMDSTTNRLDFVQKKVAMVMKKASAKGQIMMILFLLVLFIILF 240

Query: 241 VLVFLT 247
           +LVF T
Sbjct: 241 ILVFFT 243

[Close]

BLAST of Cp4.1LG00g02660 vs. TrEMBL
Match: A5BHU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034578 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.2e-98
Identity = 196/248 (79.03%), Postives = 220/248 (88.71%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQESIDKL S+FHQWERI  + GE+V LTKELLA+CESIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQ--AGTASSNGMR 120
           DK I VAA+DP+WYGID+ EL++RRRWTSTA TQV NVKK V AGKE    GTA+ NGMR
Sbjct: 61  DKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTGTANVNGMR 120

Query: 121 RELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVG 180
           RE+MR+ NPH+ DRSN Y + Q NDDFI+SESDRQLLLI+RQDEELD LSASVERIGGVG
Sbjct: 121 REMMRMSNPHQADRSNQYGS-QDNDDFISSESDRQLLLIRRQDEELDVLSASVERIGGVG 180

Query: 181 LTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFII 240
           LTIHEEL  Q+KIID+LG+EMDSTSNRLDFVQKKVA+VMKKASAKGQ+MMILFLV LFI+
Sbjct: 181 LTIHEELLAQEKIIDELGSEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILFLVVLFIV 240

Query: 241 LFVLVFLT 247
           LFVLVFLT
Sbjct: 241 LFVLVFLT 247

[Close]

BLAST of Cp4.1LG00g02660 vs. TAIR10
Match: AT1G28490.1 (AT1G28490.1 syntaxin of plants 61)

HSP 1 Score: 323.9 bits (829), Expect = 8.3e-89
Identity = 171/246 (69.51%), Postives = 204/246 (82.93%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQ+SIDKLQS+FH+WERIS D+G++  + KEL+A C SIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           +KAI VAA+DPSWYGID+AELE+RRRWTS ARTQV NVK  V AGK  +G   ++ +RRE
Sbjct: 61  EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMR+PN  E  R + Y     +D F+ SESDRQ+LLIK+QDEELDELS SV+RIGGVGLT
Sbjct: 121 LMRMPNSGEASRYDQYGGRD-DDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IH+EL  Q++IID+L  EMDST NRL+FVQKKV +VMKKA AKGQ+MMI FL+ LFIILF
Sbjct: 181 IHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 245

[Close]

BLAST of Cp4.1LG00g02660 vs. TAIR10
Match: AT1G27700.1 (AT1G27700.1 Syntaxin/t-SNARE family protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 1


Query: 5   QDPFYVVKDEIQESIDKLQSSFHQW---ERISSDLGERVQLTKELLAACESIEWQVDELD 64
           +DPF+   +E+QES D+++S++  W   +R SS + +  QL ++L AA  + +WQ+DE  
Sbjct: 10  KDPFFPAAEEVQESADRMESAYRTWLNGKRDSSKVWDSEQLHRDLHAALGTTKWQLDEFQ 69

Query: 65  KAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE- 124
           KA+  +  +     + D   +R R +T     QV  ++K +    +  G  +   +R + 
Sbjct: 70  KAVKSSYDN----RLSDETRDRHREFTFVMEAQVSKIEKSLKEAAQSDGKGTPRWVRLDE 129

Query: 125 ------LMRLPNPHETDRSN 135
                  + L  P E+ ++N
Sbjct: 130 DDRNELALFLTGPSESAKAN 145

[Close]

BLAST of Cp4.1LG00g02660 vs. TAIR10
Match: AT1G16240.1 (AT1G16240.1 syntaxin of plants 51)

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 1


Query: 153 QLLLIKRQDEELDELSASVERIGGVGLTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKK 212
           Q  +++ QDE L++L  +V     + L + EEL LQ ++IDDL   +D T +RL  VQK 
Sbjct: 135 QRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKS 194

Query: 213 VAVVMKK----ASAKGQLMMILFLVALFIILFVLV 244
           +AV+ K      S    L+ +L +V L +++++LV
Sbjct: 195 LAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLV 229

[Close]

BLAST of Cp4.1LG00g02660 vs. NCBI nr
Match: gi|659120260|ref|XP_008460099.1| (PREDICTED: syntaxin-61 [Cucumis melo])

HSP 1 Score: 435.3 bits (1118), Expect = 7.3e-119
Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSD GERVQ TKELLA+CESIEWQVDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           DKAI VAARDPSWYGIDDAELE+RRRWTSTARTQVGNVKKVVGAGKEQ G AS++GMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDDAELEKRRRWTSTARTQVGNVKKVVGAGKEQTGIASASGMRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMRLPN HETDRSNLYTAHQANDDFITSESDRQLLLIK+QDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYTAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IHEEL  QDKIIDDLG EMDSTSNRLDFVQKKVAVVMKKASAKGQ+MMILFLVALFIILF
Sbjct: 181 IHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. NCBI nr
Match: gi|449474827|ref|XP_004154296.1| (PREDICTED: syntaxin-61 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 2.1e-118
Identity = 230/246 (93.50%), Postives = 238/246 (96.75%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSD GERVQ TKELLA+CESIEWQVDEL
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           DKAI VAARDPSWYGID+AELE+RRRWTSTARTQVGNVKKVVGAGKEQ GTAS++GMRRE
Sbjct: 61  DKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTASASGMRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMRLPN HETDRSNLY+AHQANDDFITSESDRQLLLIK+QDEELDELSASVERIGGVGLT
Sbjct: 121 LMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IHEEL  QDKIIDDLG EMDSTSNRLDFVQKKVAVVMKKASAKGQ+MMILFLVALFIILF
Sbjct: 181 IHEELLAQDKIIDDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQIMMILFLVALFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. NCBI nr
Match: gi|743846501|ref|XP_011027754.1| (PREDICTED: syntaxin-61 [Populus euphratica])

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-103
Identity = 210/248 (84.68%), Postives = 226/248 (91.13%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSD GE V+LTKELLAACESIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGELVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKE--QAGTASSNGMR 120
           DKAI VAARDPSWYGID+AELE+RRRWTSTARTQVGNVKK V AGKE   +GTAS NGMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVG 180
           RELMR+P+  +TD+SN YT  Q NDDFI SESDRQ+LLIK+QDEELDELSASVERIGGVG
Sbjct: 121 RELMRMPDTQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDEELDELSASVERIGGVG 180

Query: 181 LTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFII 240
           LTIHEEL  Q++IIDDL  EMD+TSNRLDFVQKKVA+VMKKASAKGQLMMILFLV LFII
Sbjct: 181 LTIHEELLAQERIIDDLDTEMDTTSNRLDFVQKKVAMVMKKASAKGQLMMILFLVVLFII 240

Query: 241 LFVLVFLT 247
           LFVLVFLT
Sbjct: 241 LFVLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. NCBI nr
Match: gi|566165008|ref|XP_002305773.2| (Syntaxin 61 family protein [Populus trichocarpa])

HSP 1 Score: 382.1 bits (980), Expect = 7.3e-103
Identity = 208/248 (83.87%), Postives = 226/248 (91.13%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           M SAQDPFY+VK+EIQESIDKLQSSFHQWERISSD GE+V+LTKELLAACESIEWQVDEL
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKE--QAGTASSNGMR 120
           DKAI VAARDPSWYGID+AELE+RRRWTSTARTQVGNVKK V AGKE   +GTAS NGMR
Sbjct: 61  DKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMR 120

Query: 121 RELMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVG 180
           RELMR+P+  +TD+SN YT  Q NDDFI SESDRQ+LLIK+QD+ELDELSASVERIGGVG
Sbjct: 121 RELMRMPDAQQTDKSNQYT--QDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVG 180

Query: 181 LTIHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFII 240
           LTIHEEL  Q++II DL  EMD+TSNRLDFVQKKVA+VMKKASAKGQLMMILFLV LFII
Sbjct: 181 LTIHEELLAQERIIGDLDTEMDTTSNRLDFVQKKVAMVMKKASAKGQLMMILFLVVLFII 240

Query: 241 LFVLVFLT 247
           LFVLVFLT
Sbjct: 241 LFVLVFLT 246

[Close]

BLAST of Cp4.1LG00g02660 vs. NCBI nr
Match: gi|694363426|ref|XP_009360989.1| (PREDICTED: syntaxin-61-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-101
Identity = 205/246 (83.33%), Postives = 222/246 (90.24%), Query Frame = 1


Query: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDLGERVQLTKELLAACESIEWQVDEL 60
           MPSAQDPFYVVK+EIQESIDKLQSSFHQWERISSD GE+V+LTKELLA+C SIEWQVDEL
Sbjct: 1   MPSAQDPFYVVKEEIQESIDKLQSSFHQWERISSDNGEQVRLTKELLASCGSIEWQVDEL 60

Query: 61  DKAIVVAARDPSWYGIDDAELERRRRWTSTARTQVGNVKKVVGAGKEQAGTASSNGMRRE 120
           DKAI VAARDP+WYGID+ ELE+RRRWTSTAR QVG++KK V AGKE +GT S NGMRRE
Sbjct: 61  DKAISVAARDPTWYGIDEVELEKRRRWTSTARAQVGSLKKAVEAGKESSGT-SVNGMRRE 120

Query: 121 LMRLPNPHETDRSNLYTAHQANDDFITSESDRQLLLIKRQDEELDELSASVERIGGVGLT 180
           LMR+ N  ET+RSN Y AH  NDDFITSESDRQLLLIK+QDEELDELSASVERIGGVGLT
Sbjct: 121 LMRVANSQETERSNPYGAHH-NDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLT 180

Query: 181 IHEELKLQDKIIDDLGNEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLVALFIILF 240
           IHEEL  Q+KII++LG EMDSTSNRLDFVQKKVA VMKKA  KGQLMMILFL+ LFIILF
Sbjct: 181 IHEELLAQEKIIEELGTEMDSTSNRLDFVQKKVAAVMKKAGVKGQLMMILFLLVLFIILF 240

Query: 241 VLVFLT 247
           VLVFLT
Sbjct: 241 VLVFLT 244

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYP61_ARATH	1.5e-87	69.51	Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1	[more]
STX6_MOUSE	1.0e-19	30.16	Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1	[more]
STX6_CHICK	1.3e-19	29.60	Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1	[more]
STX6_HUMAN	1.7e-19	28.57	Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1	[more]
STX6_PONAB	1.7e-19	28.57	Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1	[more]

BLAST of Cp4.1LG00g02660 vs. TrEMBL


Match Name	E-value	Identity	Description
B9H2P0_POPTR	5.1e-103	83.87	Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0004s05020g PE=4 SV=2	[more]
U5FVV6_POPTR	1.4e-100	81.45	Syntaxin 61 family protein OS=Populus trichocarpa GN=POPTR_0011s05870g PE=4 SV=1	[more]
M5WIL7_PRUPE	4.0e-100	82.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010587mg PE=4 SV=1	[more]
A0A061GE34_THECC	2.2e-98	79.27	Syntaxin of plants 61 OS=Theobroma cacao GN=TCM_029787 PE=3 SV=1	[more]
A5BHU9_VITVI	2.2e-98	79.03	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034578 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g02660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28490.1	8.3e-89	69.51	syntaxin of plants 61	[more]
AT1G27700.1	3.2e-08	26.43	Syntaxin/t-SNARE family protein	[more]
AT1G16240.1	3.0e-06	35.79	syntaxin of plants 51	[more]

BLAST of Cp4.1LG00g02660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120260\|ref\|XP_008460099.1\|	7.3e-119	93.90	PREDICTED: syntaxin-61 [Cucumis melo]	[more]
gi\|449474827\|ref\|XP_004154296.1\|	2.1e-118	93.50	PREDICTED: syntaxin-61 [Cucumis sativus]	[more]
gi\|743846501\|ref\|XP_011027754.1\|	1.1e-103	84.68	PREDICTED: syntaxin-61 [Populus euphratica]	[more]
gi\|566165008\|ref\|XP_002305773.2\|	7.3e-103	83.87	Syntaxin 61 family protein [Populus trichocarpa]	[more]
gi\|694363426\|ref\|XP_009360989.1\|	1.4e-101	83.33	PREDICTED: syntaxin-61-like isoform X1 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0048193	Golgi vesicle transport
GO:0016192	vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015260	Syntaxin-6_N
IPR010989	SNARE
IPR000727	T_SNARE_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005802	trans-Golgi network
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02660.1	Cp4.1LG00g02660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 191..242 score: 1.4
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 149..216 score: 2.
IPR000727	Target SNARE coiled-coil homology domain	PROFILE	PS50192	T_SNARE	coord: 154..216 score: 1
IPR010989	t-SNARE	unknown	SSF47661	t-snare proteins	coord: 5..100 score: 6.51
IPR015260	Syntaxin 6, N-terminal	PFAM	PF09177	Syntaxin-6_N	coord: 6..99 score: 5.3
None	No IPR available	unknown	Coil	Coil	coord: 192..212 scor
None	No IPR available	GENE3D	G3DSA:1.20.5.110		coord: 156..217 score: 1.3
None	No IPR available	GENE3D	G3DSA:1.20.58.90		coord: 3..102 score: 4.7
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 5..245 score: 1.3E
None	No IPR available	PANTHER	PTHR19957:SF111	SUBFAMILY NOT NAMED	coord: 5..245 score: 1.3E
None	No IPR available	unknown	SSF58038	SNARE fusion complex	coord: 153..216 score: 2.04

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g02660	CmaCh01G009440	Cucurbita maxima (Rimu)	cmacpeB457
Cp4.1LG00g02660	CmoCh01G009840	Cucurbita moschata (Rifu)	cmocpeB418
Cp4.1LG00g02660	Carg25825	Silver-seed gourd	carcpeB1484

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g02660	Wax gourd	cpewgoB0017
Cp4.1LG00g02660	Cucurbita maxima (Rimu)	cmacpeB025
Cp4.1LG00g02660	Cucumber (Gy14) v2	cgybcpeB895