Cp4.1LG00g02620 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g02620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cp4.1LG00 : 8365712 .. 8367274 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTCAAATTCCTATGGTTGAGGAACAATGCGGCGCAAAATTTCCATGGAAAATTCAGATTAGGGTTCCAAGCATACCTCATAAAAGGTGTTCTTCCTCGCACTCCCATTTCATACAGGCCCTTCTTCCACATCTCCCATCATATTCATCATACCCAAAGTTGCGAAACGACTAGAAACTGTCATGAAACGACTAAACTTTCAAACCCAGTTGCTGTCTCAGATGATTCCATCAACGTTTATGACCAATCTGCTGTTTATGTCCAAAACGTCCTCAAATTTAGAAGACACAAACCAGTGGAGGAGATCGAGACGGCTCTTAATCGATGCAGCCTCGTCTTAACCGATGATTTTGTTCTCCAAGTGTTGCGAAGGCATCGATCGGATTGGAAACCCGCCTTCGATTTCTTCAATTGGGTCACGAAAAGAGGTAATGGAGAAGGTGAGTACTCCCCTGGTTCTGTTATTTACAATGAGATTCTTGATATTCTTGGGAAATCCAGACGCTTCGAGGAAGTAGACAAGGTGTTTGTAGAAATGTCTAAGAGAAAAAAACTTGTTAACGAGGAAACATATTTAGTTCTTCTTAATAGATATGCTGCAGCTCATAAGGTGGAGGAAGCAATTGACATCTTCCACAGAAGGCAAGAACTTGGTCTTGAGATGAATTTGATAGCGTTTCAGTCACTTTTGATGTGGTTATGTAGATACAAGCATGTAGAAATTGCAGAGACCCTGTTCCACTCCAAGAAACATGAGTTTTTTCCTGATATTAAGACGAGTAATATTGTTCTTAATGGGTGGTGTGTGTTGGGAAATGTTCATGAAGCCAAGAGGTTTTGGAGGGAGATAATTGAATCGAAGTGGGAGCCTGATATATACACTTATGGGACTTTGATAAACTCATTGACAAAGAAGGGAAAGTTAGGGACGGCTTTGAAGTTGTATAGAGCCATGTGGGAGAAGGGCTTAAAACCCGATGTTGTAATCTGCAATTGCATCATTGATGCACTTTGTTTCAAGAAGAGGATTCCTGAAGCTCTAGAGATCTTCAAGGAAATGAACGAGAGAGGGTGTGCCTCAAATGTAGCAACTTACAACACTCTCATCAAACACCTCTGTAAGATTAGGAGGATGGAGAAGGTTAATGAGCTTTTGGATGAAATGGTGGAGAGAAATAGAAGTTGTTGGCCGAATTCTGTGACGTTTAGCTACTTACTTGCGTCGGTAAGGGAACCGGAGGAAATTCCAATACTCGTGGAAAGGATGGAGAGGAGTGGATGCAAGATGAGCAGTGACACTTACAATCTGATATTGCGATTGTACATGGAGTGGGATATTGAGGAAAGGGTTGAGTGTACTTGGAATGAAATGGAAGAGATGGGGTTGGGACCGGACCGTCGGTCTTACACGATTATGATACACGGTTTGTACGAGAAGGGAAGAAAAGAAGAGGGGTTGCGTTATTATAGGGAGATGACATTGAAGGGAATGATGGTTGAGGCAAAGACTGAGAAGTTGGTGAATGCTATGAACGTGAAACTGCAGAAAAGAAGGTGA

mRNA sequence

ATGAGGTTCAAATTCCTATGGTTGAGGAACAATGCGGCGCAAAATTTCCATGGAAAATTCAGATTAGGGTTCCAAGCATACCTCATAAAAGGTGTTCTTCCTCGCACTCCCATTTCATACAGGCCCTTCTTCCACATCTCCCATCATATTCATCATACCCAAAGTTGCGAAACGACTAGAAACTGTCATGAAACGACTAAACTTTCAAACCCAGTTGCTGTCTCAGATGATTCCATCAACGTTTATGACCAATCTGCTGTTTATGTCCAAAACGTCCTCAAATTTAGAAGACACAAACCAGTGGAGGAGATCGAGACGGCTCTTAATCGATGCAGCCTCGTCTTAACCGATGATTTTGTTCTCCAAGTGTTGCGAAGGCATCGATCGGATTGGAAACCCGCCTTCGATTTCTTCAATTGGGTCACGAAAAGAGGTAATGGAGAAGGTGAGTACTCCCCTGGTTCTGTTATTTACAATGAGATTCTTGATATTCTTGGGAAATCCAGACGCTTCGAGGAAGTAGACAAGGTGTTTGTAGAAATGTCTAAGAGAAAAAAACTTGTTAACGAGGAAACATATTTAGTTCTTCTTAATAGATATGCTGCAGCTCATAAGGTGGAGGAAGCAATTGACATCTTCCACAGAAGGCAAGAACTTGGTCTTGAGATGAATTTGATAGCGTTTCAGTCACTTTTGATGTGGTTATGTAGATACAAGCATGTAGAAATTGCAGAGACCCTGTTCCACTCCAAGAAACATGAGTTTTTTCCTGATATTAAGACGAGTAATATTGTTCTTAATGGGTGGTGTGTGTTGGGAAATGTTCATGAAGCCAAGAGGTTTTGGAGGGAGATAATTGAATCGAAGTGGGAGCCTGATATATACACTTATGGGACTTTGATAAACTCATTGACAAAGAAGGGAAAGTTAGGGACGGCTTTGAAGTTGTATAGAGCCATGTGGGAGAAGGGCTTAAAACCCGATGTTGTAATCTGCAATTGCATCATTGATGCACTTTGTTTCAAGAAGAGGATTCCTGAAGCTCTAGAGATCTTCAAGGAAATGAACGAGAGAGGGTGTGCCTCAAATGTAGCAACTTACAACACTCTCATCAAACACCTCTGTAAGATTAGGAGGATGGAGAAGGTTAATGAGCTTTTGGATGAAATGGTGGAGAGAAATAGAAGTTGTTGGCCGAATTCTGTGACGTTTAGCTACTTACTTGCGTCGGTAAGGGAACCGGAGGAAATTCCAATACTCGTGGAAAGGATGGAGAGGAGTGGATGCAAGATGAGCAGTGACACTTACAATCTGATATTGCGATTGTACATGGAGTGGGATATTGAGGAAAGGGTTGAGTGTACTTGGAATGAAATGGAAGAGATGGGGTTGGGACCGGACCGTCGGTCTTACACGATTATGATACACGGTTTGTACGAGAAGGGAAGAAAAGAAGAGGGGTTGCGTTATTATAGGGAGATGACATTGAAGGGAATGATGGTTGAGGCAAAGACTGAGAAGTTGGTGAATGCTATGAACGTGAAACTGCAGAAAAGAAGGTGA

Coding sequence (CDS)

ATGAGGTTCAAATTCCTATGGTTGAGGAACAATGCGGCGCAAAATTTCCATGGAAAATTCAGATTAGGGTTCCAAGCATACCTCATAAAAGGTGTTCTTCCTCGCACTCCCATTTCATACAGGCCCTTCTTCCACATCTCCCATCATATTCATCATACCCAAAGTTGCGAAACGACTAGAAACTGTCATGAAACGACTAAACTTTCAAACCCAGTTGCTGTCTCAGATGATTCCATCAACGTTTATGACCAATCTGCTGTTTATGTCCAAAACGTCCTCAAATTTAGAAGACACAAACCAGTGGAGGAGATCGAGACGGCTCTTAATCGATGCAGCCTCGTCTTAACCGATGATTTTGTTCTCCAAGTGTTGCGAAGGCATCGATCGGATTGGAAACCCGCCTTCGATTTCTTCAATTGGGTCACGAAAAGAGGTAATGGAGAAGGTGAGTACTCCCCTGGTTCTGTTATTTACAATGAGATTCTTGATATTCTTGGGAAATCCAGACGCTTCGAGGAAGTAGACAAGGTGTTTGTAGAAATGTCTAAGAGAAAAAAACTTGTTAACGAGGAAACATATTTAGTTCTTCTTAATAGATATGCTGCAGCTCATAAGGTGGAGGAAGCAATTGACATCTTCCACAGAAGGCAAGAACTTGGTCTTGAGATGAATTTGATAGCGTTTCAGTCACTTTTGATGTGGTTATGTAGATACAAGCATGTAGAAATTGCAGAGACCCTGTTCCACTCCAAGAAACATGAGTTTTTTCCTGATATTAAGACGAGTAATATTGTTCTTAATGGGTGGTGTGTGTTGGGAAATGTTCATGAAGCCAAGAGGTTTTGGAGGGAGATAATTGAATCGAAGTGGGAGCCTGATATATACACTTATGGGACTTTGATAAACTCATTGACAAAGAAGGGAAAGTTAGGGACGGCTTTGAAGTTGTATAGAGCCATGTGGGAGAAGGGCTTAAAACCCGATGTTGTAATCTGCAATTGCATCATTGATGCACTTTGTTTCAAGAAGAGGATTCCTGAAGCTCTAGAGATCTTCAAGGAAATGAACGAGAGAGGGTGTGCCTCAAATGTAGCAACTTACAACACTCTCATCAAACACCTCTGTAAGATTAGGAGGATGGAGAAGGTTAATGAGCTTTTGGATGAAATGGTGGAGAGAAATAGAAGTTGTTGGCCGAATTCTGTGACGTTTAGCTACTTACTTGCGTCGGTAAGGGAACCGGAGGAAATTCCAATACTCGTGGAAAGGATGGAGAGGAGTGGATGCAAGATGAGCAGTGACACTTACAATCTGATATTGCGATTGTACATGGAGTGGGATATTGAGGAAAGGGTTGAGTGTACTTGGAATGAAATGGAAGAGATGGGGTTGGGACCGGACCGTCGGTCTTACACGATTATGATACACGGTTTGTACGAGAAGGGAAGAAAAGAAGAGGGGTTGCGTTATTATAGGGAGATGACATTGAAGGGAATGATGGTTGAGGCAAAGACTGAGAAGTTGGTGAATGCTATGAACGTGAAACTGCAGAAAAGAAGGTGA

Protein sequence

MRFKFLWLRNNAAQNFHGKFRLGFQAYLIKGVLPRTPISYRPFFHISHHIHHTQSCETTRNCHETTKLSNPVAVSDDSINVYDQSAVYVQNVLKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQKRR

Homology

[Close]

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot
Match: PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.6e-147
Identity = 251/432 (58.10%), Postives = 328/432 (75.93%), Query Frame = 1


Query: 84  QSAVYVQNVLKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTK 143
           QSA+ V N++K  R    E+I+  L++C + LT++ VL+V+ R+RSDWKPA+     V K
Sbjct: 76  QSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVK 135

Query: 144 RGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAA 203
               +  +   S++YNEILD+LGK RRFEE  +VF EMSKR   VNE+TY VLLNRYAAA
Sbjct: 136 ----QSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAA 195

Query: 204 HKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSN 263
           HKV+EA+ +F RR+E G++ +L+AF  LLMWLCRYKHVE AETLF S++ EF  DIK  N
Sbjct: 196 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMN 255

Query: 264 IVLNGWCVLGNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEK 323
           ++LNGWCVLGNVHEAKRFW++II SK  PD+ +YGT+IN+LTKKGKLG A++LYRAMW+ 
Sbjct: 256 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 315

Query: 324 GLKPDVVICNCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKV 383
              PDV ICN +IDALCFKKRIPEALE+F+E++E+G   NV TYN+L+KHLCKIRR EKV
Sbjct: 316 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 375

Query: 384 NELLDEMVERNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLY 443
            EL++EM  +  SC PN VTFSYLL   +  +++ I++ERM ++ C+M+SD YNL+ RLY
Sbjct: 376 WELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLY 435

Query: 444 MEWDIEERVECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEA 503
           ++WD EE+V   W+EME  GLGPD+R+YTI IHGL+ KG+  E L Y++EM  KGM+ E 
Sbjct: 436 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 495

Query: 504 KTEKLVNAMNVK 516
           +TE L+N    K
Sbjct: 496 RTEMLLNQNKTK 503

[Close]

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-72
Identity = 150/413 (36.32%), Postives = 235/413 (56.90%), Query Frame = 1


Query: 102 EEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEI 161
           +E+   L  C +  +++ V+++L R R+DW+ AF FF W  K+      Y      Y+ +
Sbjct: 112 KELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG----YVRSVREYHSM 171

Query: 162 LDILGKSRRFEEVDKVFVEMSK-RKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELG 221
           + ILGK R+F+    +  EM K    LVN +T L+++ +Y A H V +AI+ FH  +   
Sbjct: 172 ISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 231

Query: 222 LEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWC-VLGNVHEAK 281
           LEM +  FQSLL  LCRYK+V  A  L    K ++  D K+ NIVLNGWC V+G+  EA+
Sbjct: 232 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 291

Query: 282 RFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDAL 341
           R W E+     + D+ +Y ++I+  +K G L   LKL+  M ++ ++PD  + N ++ AL
Sbjct: 292 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 351

Query: 342 CFKKRIPEALEIFKEMNE-RGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCW 401
                + EA  + K M E +G   NV TYN+LIK LCK R+ E+  ++ DEM+E+    +
Sbjct: 352 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG--LF 411

Query: 402 PNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNE 461
           P   T+   +  +R  EE+  L+ +M + GC+ + +TY +++R    W   + V   W+E
Sbjct: 412 PTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 471

Query: 462 MEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNA 512
           M+E  +GPD  SY +MIHGL+  G+ EE   YY+EM  KGM      E ++ +
Sbjct: 472 MKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQS 518

[Close]

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot
Match: PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.4e-57
Identity = 131/402 (32.59%), Postives = 212/402 (52.74%), Query Frame = 1


Query: 120 VLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFV 179
           V + L  + +DW+ A +FFNWV +    E  +   +  +N ++DILGK   FE    +  
Sbjct: 50  VCEALTCYSNDWQKALEFFNWVER----ESGFRHTTETFNRVIDILGKYFEFEISWALIN 109

Query: 180 EM-SKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRY 239
            M    + + N  T+ ++  RY  AH V+EAID + +  +  L  +  +F +L+  LC +
Sbjct: 110 RMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEH 169

Query: 240 KHVEIAETLFHSKK---HEF-FPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDI 299
           KHV  AE L   K    + F   + K  N++L GW  LG   + K +W+++       D+
Sbjct: 170 KHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDL 229

Query: 300 YTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKE 359
           ++Y   ++ + K GK   A+KLY+ M  + +K DVV  N +I A+   + +   + +F+E
Sbjct: 230 FSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFRE 289

Query: 360 MNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREP 419
           M ERGC  NVAT+NT+IK LC+  RM     +LDEM +  R C P+S+T+  L + + +P
Sbjct: 290 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK--RGCQPDSITYMCLFSRLEKP 349

Query: 420 EEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIM 479
            EI  L  RM RSG +   DTY +++R +  W   + V   W  M+E G  PD  +Y  +
Sbjct: 350 SEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 409

Query: 480 IHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKL 517
           I  L +KG  +    Y  EM  +G+    + E +  +++  L
Sbjct: 410 IDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLDETL 444

[Close]

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-53
Identity = 127/399 (31.83%), Postives = 207/399 (51.88%), Query Frame = 1


Query: 104 IETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILD 163
           +E  L+   L L+ D +++VL R R   KPAF FF W  +R      ++  S  YN ++ 
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHDSRTYNSMMS 207

Query: 164 ILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEM 223
           IL K+R+FE +  V  EM   K L+  ET+ + +  +AAA + ++A+ IF   ++   ++
Sbjct: 208 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267

Query: 224 NLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWR 283
            +     LL  L R K  + A+ LF   K  F P++ T  ++LNGWC + N+ EA R W 
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327

Query: 284 EIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKK 343
           ++I+   +PDI  +  ++  L +  K   A+KL+  M  KG  P+V     +I   C + 
Sbjct: 328 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387

Query: 344 RIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVT 403
            +  A+E F +M + G   + A Y  LI      ++++ V ELL EM E+     P+  T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKT 447

Query: 404 FS---YLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEME 463
           ++    L+A+ + PE    +  +M ++  + S  T+N+I++ Y      E     W EM 
Sbjct: 448 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI 507

Query: 464 EMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGM 500
           + G+ PD  SYT++I GL  +G+  E  RY  EM  KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-53
Identity = 127/399 (31.83%), Postives = 208/399 (52.13%), Query Frame = 1


Query: 104 IETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILD 163
           +E  L+   L L+ D +++VL R R   KPAF FF W  +R      ++  S  YN ++ 
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHASRTYNSMMS 207

Query: 164 ILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEM 223
           IL K+R+FE +  V  EM   K L+  ET+ + +  +AAA + ++A+ IF   ++   ++
Sbjct: 208 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267

Query: 224 NLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWR 283
            +     LL  L R K  + A+ LF   K  F P++ T  ++LNGWC + N+ EA R W 
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327

Query: 284 EIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKK 343
           ++I+   +PDI  +  ++  L +  K   A+KL+  M  KG  P+V     +I   C + 
Sbjct: 328 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387

Query: 344 RIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVT 403
            +  A+E F +M + G   + A Y  LI      ++++ V ELL EM E+     P+  T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKT 447

Query: 404 FS---YLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEME 463
           ++    L+A+ + PE    +  +M ++  + S  T+N+I++ Y      E     W+EM 
Sbjct: 448 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 507

Query: 464 EMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGM 500
           + G+ PD  SYT++I GL  +G+  E  RY  EM  KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of Cp4.1LG00g02620 vs. TrEMBL
Match: A0A0A0K3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206990 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 5.5e-240
Identity = 414/524 (79.01%), Postives = 455/524 (86.83%), Query Frame = 1


Query: 1   MRFKFLWLRNNAAQNFHGKFRLGFQAYLIKGVLPRTPISYRPFFHISHHIHHTQSCE--- 60
           M+FKFL LRN +A++FHG F+  FQ+ L+K  LP  P S+RPF  +S  IHH  SC    
Sbjct: 1   MKFKFLRLRNISAEDFHGNFKFRFQSNLVKRFLPHIPTSHRPFSVVSDPIHHILSCHNLT 60

Query: 61  -TTRNCHETTKLSNPVAVSDDSINVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCSLV 120
            + RNCH+ T +S+ +AVSD+ I V+  D SAVYVQNVL FRRHKPVE+IE AL+ C LV
Sbjct: 61  PSPRNCHDRTLVSDSIAVSDEPITVHPDDPSAVYVQNVLYFRRHKPVEDIERALSLCDLV 120

Query: 121 LTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEV 180
           LTDDFVL+VLRRHRSDW PAF FFNWV KRG  E +++PGSVIYNEIL ILGK RRFEEV
Sbjct: 121 LTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEV 180

Query: 181 DKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMW 240
           DKV VEMSKRK+LVNEETY VLLNRYAAAHKVEEAI IF+RRQE GLEMNLIAFQSLLMW
Sbjct: 181 DKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMW 240

Query: 241 LCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDI 300
           LCRYKHVE AETLFHSKKHEF  DIKTSNI+LNGWCVLGNVHEAKRFWREIIESK EPDI
Sbjct: 241 LCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDI 300

Query: 301 YTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKE 360
           YTYGTLINSLTKKGKLGTALKL+RAMWE+GL  DVVICNCIIDALCFKKRIPEALEIFKE
Sbjct: 301 YTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKE 360

Query: 361 MNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREP 420
           MNERGCA+NVATYNTLIKHLCKIRRMEKVNELL+EM ER  SCWPNSVTF YLL SVR P
Sbjct: 361 MNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGP 420

Query: 421 EEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIM 480
           EE+P+L +RMERSGCKM+SD YNLILRLYM+WDI+ERV+ TWNEM+EMGLGPDRRSYTIM
Sbjct: 421 EEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIM 480

Query: 481 IHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQK 519
           IHGLYEKGR ++GLRY+ EMTLKG+M E KTEKLVNA NVK  K
Sbjct: 481 IHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVKEPK 524

[Close]

BLAST of Cp4.1LG00g02620 vs. TrEMBL
Match: A0A067JX44_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20187 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 5.1e-169
Identity = 295/484 (60.95%), Postives = 371/484 (76.65%), Query Frame = 1


Query: 40  YRPFFHISHHIHHTQSCETTRNCHETT-----KLSNPVAVSDDSINVYDQSAVYVQNVLK 99
           Y  + HI H+ +  ++     N   T        +N   V++       + A+ VQN+LK
Sbjct: 31  YIHYLHIPHNRNPEKNYFQESNSQSTAFHFVHSAANAHLVTEFGPKPTSEVAIDVQNILK 90

Query: 100 FRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPG 159
             R     +IE AL +CS  +T+D +L VL+RH SDWK AF FFNW +KRG        G
Sbjct: 91  NYRESATRKIELALTQCSPTVTEDLILNVLKRHHSDWKLAFIFFNWASKRGQA----FLG 150

Query: 160 SVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFH 219
           S +YNEILDILGK RRFEE+ +V  EMSKR+ LVNEETY +L+NRYAAAHKVEEAI++F+
Sbjct: 151 SSVYNEILDILGKMRRFEELTQVLGEMSKREGLVNEETYRILVNRYAAAHKVEEAINVFN 210

Query: 220 RRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGN 279
           +R++LGLE+ L+AFQ LLM LCRYKHVEIAETL +++ + F  DIKT NIVLNGWCVLGN
Sbjct: 211 KRRDLGLELGLVAFQKLLMCLCRYKHVEIAETLLYAEGNSFDLDIKTMNIVLNGWCVLGN 270

Query: 280 VHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNC 339
           VHEAKRFW++II SK +PD++TYGT I +LTKKGKLGTA+KLYRA+WE   KPDVVICNC
Sbjct: 271 VHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTAMKLYRALWETQCKPDVVICNC 330

Query: 340 IIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERN 399
           IIDALCFKKR+PEALE+FKEMNERGC  NVATYN+LIKH CKI+RMEKV ELLDEM E+ 
Sbjct: 331 IIDALCFKKRVPEALEVFKEMNERGCLPNVATYNSLIKHFCKIQRMEKVYELLDEMQEKK 390

Query: 400 RSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVEC 459
            SC PN++TF+YLL ++++PEE+P  +ERM+R+GC ++ DTYNL L+LYM+WD EER   
Sbjct: 391 GSCMPNNITFNYLLKALKKPEELPEFLERMKRNGCAINGDTYNLTLKLYMDWDCEERARN 450

Query: 460 TWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNV 519
           TWNEME+ GLGPDRRSYTIMIH  Y+KGR ++ L Y+ EMT KGM+ + +TE LV+ MN+
Sbjct: 451 TWNEMEKNGLGPDRRSYTIMIHWFYDKGRIKDALHYFGEMTSKGMVPDRRTEILVDTMNM 510

[Close]

BLAST of Cp4.1LG00g02620 vs. TrEMBL
Match: B9T1Y0_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0108810 PE=4 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 6.6e-169
Identity = 287/432 (66.44%), Postives = 361/432 (83.56%), Query Frame = 1


Query: 86  AVYVQNVLKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRG 145
           A+ VQNVLK  R  P  +IE AL +C+  +T+D +L+VL+RHRSDWKPA  FFNWV+K G
Sbjct: 49  ALKVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGG 108

Query: 146 NGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHK 205
               +   GS  YNEILDILGK RRF+E+ +V   MSKR+ LVNEETY VL+NRYAAAHK
Sbjct: 109 ----KVLMGSGAYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHK 168

Query: 206 VEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIV 265
           VEEAI+IF+ R+++GLE++L++FQ+LLM+LCRYKHV+IAE+L +SK  +F  DIKT NIV
Sbjct: 169 VEEAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIV 228

Query: 266 LNGWCVLGNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGL 325
           LNGWCVLGNVHEAKRFW++II SK +PD++TYGT I +LTKKGKLGTALK+YRAMWEK  
Sbjct: 229 LNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQC 288

Query: 326 KPDVVICNCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNE 385
           KPDVVICNCIIDALCFK R+PEALE+F+EM+++GC  N ATYN+LIKH  +IRRMEKV E
Sbjct: 289 KPDVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYE 348

Query: 386 LLDEMVERNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYME 445
           LLDEM+++  SC P+ +TF+YLL ++++PEE+P+++ERMER+GC +S+DTYNLILRLY +
Sbjct: 349 LLDEMLDKKGSCMPDHITFNYLLKALKKPEELPLVLERMERNGCMISTDTYNLILRLYAD 408

Query: 446 WDIEERVECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKT 505
           WD EERV  TWNEME++GLGPDRRSYTIMIH LYEKGR  + L Y+ EMT KGM+ E +T
Sbjct: 409 WDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGMVSEPRT 468

Query: 506 EKLVNAMNVKLQ 518
           E LV++MN+KL+
Sbjct: 469 EMLVSSMNMKLK 476

[Close]

BLAST of Cp4.1LG00g02620 vs. TrEMBL
Match: A0A061F7S4_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_031610 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 4.4e-165
Identity = 282/431 (65.43%), Postives = 350/431 (81.21%), Query Frame = 1


Query: 89  VQNVLKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGE 148
           +QN+L   R+  +EEIE AL++C + +T+   L ++RR+RSDWK A  FF WV+K+G   
Sbjct: 80  LQNILNNHRNSSIEEIEQALDQCEVTMTEGLALDLVRRNRSDWKLAHVFFQWVSKKG--- 139

Query: 149 GEYSPGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEE 208
            E S G  +YNEILD+LGK  RFEE+ KVF EM +R+ LVNE T+ +LL+RYAAA KVE+
Sbjct: 140 -ENSLGFDVYNEILDVLGKMHRFEELRKVFDEMLEREGLVNEGTFKILLHRYAAADKVED 199

Query: 209 AIDIFHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNG 268
           A+ +F+RR+E G + +++AFQ LLM LCRYKHVE AETL+ SK+ EF  DIKT NI+LNG
Sbjct: 200 AMGVFNRRKEFGFKDDVVAFQVLLMCLCRYKHVEFAETLYQSKRREFGYDIKTMNIILNG 259

Query: 269 WCVLGNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPD 328
           WCVLGNVHEA+RFW++IIESK +PD++TYGT IN+LTKKGKLGTA+KL+R MWEKG  PD
Sbjct: 260 WCVLGNVHEARRFWKDIIESKCKPDLFTYGTFINALTKKGKLGTAMKLFRGMWEKGCDPD 319

Query: 329 VVICNCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLD 388
           VVICNC+IDALCFKKRIPEALE+F+EM ERGC  NV TYN+LIKHLCKIRRMEKV E+LD
Sbjct: 320 VVICNCVIDALCFKKRIPEALELFREMGERGCVPNVVTYNSLIKHLCKIRRMEKVYEILD 379

Query: 389 EMVERNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDI 448
           EM E+   C PN VTF+YLL S+++PEE+P ++ERMER GC MS DTYNLIL+LYM+W  
Sbjct: 380 EMEEKG-GCLPNDVTFNYLLKSLKKPEEVPGVLERMERYGCNMSGDTYNLILKLYMKWGH 439

Query: 449 EERVECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKL 508
           EERV CTW+EME+ GLGPDRRSYTIMIHGLY+KG  E+ L Y+ EMT KGM+ E +TE L
Sbjct: 440 EERVRCTWDEMEKSGLGPDRRSYTIMIHGLYDKGSIEDALSYFNEMTSKGMVPEPRTEIL 499

Query: 509 VNAMNVKLQKR 520
           VNAM  KL+++
Sbjct: 500 VNAMKDKLKEQ 505

[Close]

BLAST of Cp4.1LG00g02620 vs. TrEMBL
Match: A0A067EDG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048749mg PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 5.8e-165
Identity = 284/460 (61.74%), Postives = 361/460 (78.48%), Query Frame = 1


Query: 64  ETTKLSNPVAVSDDSINVY----DQSAVYVQNVLKFRRHKPVEEIETALNRCSLVLTDDF 123
           ET +L + +A SD+         D+ A+ VQN+LK        EIE ALN+C L LTDD 
Sbjct: 65  ETAQLVHSLANSDEKSEFQRYPGDEIAINVQNILKTCSVSTKGEIEKALNQCELTLTDDL 124

Query: 124 VLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFV 183
           ++ V+ R+R DW+ A+ FF WV++    EG+YSPGS ++N ILD+LG++RRF E+ +VF 
Sbjct: 125 IVNVINRYRFDWEAAYTFFKWVSR----EGDYSPGSNVFNAILDVLGRARRFVELIQVFD 184

Query: 184 EMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRYK 243
           EM     LVNE+TY +LLNRYAAAH VEEAI +F RR+E G   +L AFQ+LL+WLCRYK
Sbjct: 185 EMPD---LVNEKTYGILLNRYAAAHMVEEAIGVFDRRKEFGELDDLSAFQNLLLWLCRYK 244

Query: 244 HVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDIYTYGT 303
           HVE+AET F S+K+EF  DIKT NI+LNGWCVLGNV+EAKRFW++II+SK EPD  TY T
Sbjct: 245 HVEVAETFFESEKNEFGYDIKTMNIILNGWCVLGNVYEAKRFWKDIIKSKCEPDSVTYAT 304

Query: 304 LINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKEMNERG 363
            +N+LTKKGKLGTAL+L++AMWEKG KPDVV CNCIIDALCFKKRIPEALE+ +EM  RG
Sbjct: 305 FVNALTKKGKLGTALRLFQAMWEKGRKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG 364

Query: 364 CASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREPEEIPI 423
           C  NV TYN+LIKHLCKI+RME V E LDEM ++N SC PN +TF+YLL S+++PEE+P 
Sbjct: 365 CLPNVTTYNSLIKHLCKIKRMETVYEYLDEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 424

Query: 424 LVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIMIHGLY 483
           ++ERMER+GCKMS+DTYN+IL+LY+ WD E++V  TW EME+ G+GPD+RSYT+MIHGLY
Sbjct: 425 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVMIHGLY 484

Query: 484 EKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQKR 520
           +KGR E+ L Y+ EM LKGM+ E +T  LVN MN+KL++R
Sbjct: 485 DKGRLEDALSYFHEMRLKGMVPEPRTGILVNDMNIKLKER 517

[Close]

BLAST of Cp4.1LG00g02620 vs. TAIR10
Match: AT3G15200.1 (AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 522.7 bits (1345), Expect = 2.6e-148
Identity = 251/432 (58.10%), Postives = 328/432 (75.93%), Query Frame = 1


Query: 84  QSAVYVQNVLKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTK 143
           QSA+ V N++K  R    E+I+  L++C + LT++ VL+V+ R+RSDWKPA+     V K
Sbjct: 76  QSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVK 135

Query: 144 RGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAA 203
               +  +   S++YNEILD+LGK RRFEE  +VF EMSKR   VNE+TY VLLNRYAAA
Sbjct: 136 ----QSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAA 195

Query: 204 HKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSN 263
           HKV+EA+ +F RR+E G++ +L+AF  LLMWLCRYKHVE AETLF S++ EF  DIK  N
Sbjct: 196 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMN 255

Query: 264 IVLNGWCVLGNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEK 323
           ++LNGWCVLGNVHEAKRFW++II SK  PD+ +YGT+IN+LTKKGKLG A++LYRAMW+ 
Sbjct: 256 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 315

Query: 324 GLKPDVVICNCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKV 383
              PDV ICN +IDALCFKKRIPEALE+F+E++E+G   NV TYN+L+KHLCKIRR EKV
Sbjct: 316 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 375

Query: 384 NELLDEMVERNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLY 443
            EL++EM  +  SC PN VTFSYLL   +  +++ I++ERM ++ C+M+SD YNL+ RLY
Sbjct: 376 WELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLY 435

Query: 444 MEWDIEERVECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEA 503
           ++WD EE+V   W+EME  GLGPD+R+YTI IHGL+ KG+  E L Y++EM  KGM+ E 
Sbjct: 436 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 495

Query: 504 KTEKLVNAMNVK 516
           +TE L+N    K
Sbjct: 496 RTEMLLNQNKTK 503

[Close]

BLAST of Cp4.1LG00g02620 vs. TAIR10
Match: AT5G15010.1 (AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-73
Identity = 150/413 (36.32%), Postives = 235/413 (56.90%), Query Frame = 1


Query: 102 EEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEI 161
           +E+   L  C +  +++ V+++L R R+DW+ AF FF W  K+      Y      Y+ +
Sbjct: 112 KELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG----YVRSVREYHSM 171

Query: 162 LDILGKSRRFEEVDKVFVEMSK-RKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELG 221
           + ILGK R+F+    +  EM K    LVN +T L+++ +Y A H V +AI+ FH  +   
Sbjct: 172 ISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 231

Query: 222 LEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWC-VLGNVHEAK 281
           LEM +  FQSLL  LCRYK+V  A  L    K ++  D K+ NIVLNGWC V+G+  EA+
Sbjct: 232 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 291

Query: 282 RFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDAL 341
           R W E+     + D+ +Y ++I+  +K G L   LKL+  M ++ ++PD  + N ++ AL
Sbjct: 292 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 351

Query: 342 CFKKRIPEALEIFKEMNE-RGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCW 401
                + EA  + K M E +G   NV TYN+LIK LCK R+ E+  ++ DEM+E+    +
Sbjct: 352 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG--LF 411

Query: 402 PNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNE 461
           P   T+   +  +R  EE+  L+ +M + GC+ + +TY +++R    W   + V   W+E
Sbjct: 412 PTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 471

Query: 462 MEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNA 512
           M+E  +GPD  SY +MIHGL+  G+ EE   YY+EM  KGM      E ++ +
Sbjct: 472 MKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQS 518

[Close]

BLAST of Cp4.1LG00g02620 vs. TAIR10
Match: AT1G80550.1 (AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 2.5e-58
Identity = 131/402 (32.59%), Postives = 212/402 (52.74%), Query Frame = 1


Query: 120 VLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEVDKVFV 179
           V + L  + +DW+ A +FFNWV +    E  +   +  +N ++DILGK   FE    +  
Sbjct: 50  VCEALTCYSNDWQKALEFFNWVER----ESGFRHTTETFNRVIDILGKYFEFEISWALIN 109

Query: 180 EM-SKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMWLCRY 239
            M    + + N  T+ ++  RY  AH V+EAID + +  +  L  +  +F +L+  LC +
Sbjct: 110 RMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEH 169

Query: 240 KHVEIAETLFHSKK---HEF-FPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDI 299
           KHV  AE L   K    + F   + K  N++L GW  LG   + K +W+++       D+
Sbjct: 170 KHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDL 229

Query: 300 YTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKE 359
           ++Y   ++ + K GK   A+KLY+ M  + +K DVV  N +I A+   + +   + +F+E
Sbjct: 230 FSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFRE 289

Query: 360 MNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREP 419
           M ERGC  NVAT+NT+IK LC+  RM     +LDEM +  R C P+S+T+  L + + +P
Sbjct: 290 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK--RGCQPDSITYMCLFSRLEKP 349

Query: 420 EEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIM 479
            EI  L  RM RSG +   DTY +++R +  W   + V   W  M+E G  PD  +Y  +
Sbjct: 350 SEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 409

Query: 480 IHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKL 517
           I  L +KG  +    Y  EM  +G+    + E +  +++  L
Sbjct: 410 IDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLDETL 444

[Close]

BLAST of Cp4.1LG00g02620 vs. TAIR10
Match: AT3G62470.1 (AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 211.8 bits (538), Expect = 9.8e-55
Identity = 127/399 (31.83%), Postives = 207/399 (51.88%), Query Frame = 1


Query: 104 IETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILD 163
           +E  L+   L L+ D +++VL R R   KPAF FF W  +R      ++  S  YN ++ 
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHDSRTYNSMMS 207

Query: 164 ILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEM 223
           IL K+R+FE +  V  EM   K L+  ET+ + +  +AAA + ++A+ IF   ++   ++
Sbjct: 208 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267

Query: 224 NLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWR 283
            +     LL  L R K  + A+ LF   K  F P++ T  ++LNGWC + N+ EA R W 
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327

Query: 284 EIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKK 343
           ++I+   +PDI  +  ++  L +  K   A+KL+  M  KG  P+V     +I   C + 
Sbjct: 328 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387

Query: 344 RIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVT 403
            +  A+E F +M + G   + A Y  LI      ++++ V ELL EM E+     P+  T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKT 447

Query: 404 FS---YLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEME 463
           ++    L+A+ + PE    +  +M ++  + S  T+N+I++ Y      E     W EM 
Sbjct: 448 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI 507

Query: 464 EMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGM 500
           + G+ PD  SYT++I GL  +G+  E  RY  EM  KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of Cp4.1LG00g02620 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-54
Identity = 127/399 (31.83%), Postives = 208/399 (52.13%), Query Frame = 1


Query: 104 IETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILD 163
           +E  L+   L L+ D +++VL R R   KPAF FF W  +R      ++  S  YN ++ 
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQG----FAHASRTYNSMMS 207

Query: 164 ILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEM 223
           IL K+R+FE +  V  EM   K L+  ET+ + +  +AAA + ++A+ IF   ++   ++
Sbjct: 208 ILAKTRQFETMVSVLEEMGT-KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 267

Query: 224 NLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWR 283
            +     LL  L R K  + A+ LF   K  F P++ T  ++LNGWC + N+ EA R W 
Sbjct: 268 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 327

Query: 284 EIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKK 343
           ++I+   +PDI  +  ++  L +  K   A+KL+  M  KG  P+V     +I   C + 
Sbjct: 328 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 387

Query: 344 RIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVT 403
            +  A+E F +M + G   + A Y  LI      ++++ V ELL EM E+     P+  T
Sbjct: 388 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP--PDGKT 447

Query: 404 FS---YLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEME 463
           ++    L+A+ + PE    +  +M ++  + S  T+N+I++ Y      E     W+EM 
Sbjct: 448 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 507

Query: 464 EMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGM 500
           + G+ PD  SYT++I GL  +G+  E  RY  EM  KGM
Sbjct: 508 KKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539

[Close]

BLAST of Cp4.1LG00g02620 vs. NCBI nr
Match: gi|659093850|ref|XP_008447751.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucumis melo])

HSP 1 Score: 860.1 bits (2221), Expect = 1.9e-246
Identity = 420/524 (80.15%), Postives = 464/524 (88.55%), Query Frame = 1


Query: 1   MRFKFLWLRNNAAQNFHGKFRLGFQAYLIKGVLPRTPISYRPFFHISHHIHHTQSCETT- 60
           M+FK  WLRN  A++FHGKF+LGFQ+ L+KG LP TP S+RPF  +S  IHH  SCE   
Sbjct: 1   MKFKVSWLRNITAEDFHGKFKLGFQSNLVKGFLPHTPTSHRPFSVVSDRIHHILSCENLT 60

Query: 61  ---RNCHETTKLSNPVAVSDDSINVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCSLV 120
              RNCHE T +SN +A SD+ I V+  D SAVYVQNVL FRRHKPVEEI+ AL+ C LV
Sbjct: 61  PRPRNCHERTLVSNSIADSDEPITVHRDDPSAVYVQNVLYFRRHKPVEEIDRALSLCDLV 120

Query: 121 LTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEV 180
           LT+DFVL+VLRRHRSDWKPAF FFNWVTK+G  E +++PGSVIYNEILDILGKS RFEEV
Sbjct: 121 LTEDFVLKVLRRHRSDWKPAFIFFNWVTKKGTNEDKFTPGSVIYNEILDILGKSHRFEEV 180

Query: 181 DKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMW 240
           DKVFVEMSKRK+LVNEETY VLLNRYAAAHKVEEAI IF+RRQE GLEMNLIAFQSLLMW
Sbjct: 181 DKVFVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMW 240

Query: 241 LCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDI 300
           LCRYKHVE AETLFHSKKHEF  DIKTSNI+LNGWCVLGNVHEAKRFWREIIESK EPDI
Sbjct: 241 LCRYKHVEAAETLFHSKKHEFVIDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDI 300

Query: 301 YTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKE 360
           YTYGTLINSLTKKGKLGTALKL+RAMWE+GLK DVVICNCIIDALCFKKRIPEALEIFKE
Sbjct: 301 YTYGTLINSLTKKGKLGTALKLFRAMWERGLKTDVVICNCIIDALCFKKRIPEALEIFKE 360

Query: 361 MNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREP 420
           MNERGCA+NVATYNTLIKHLCKIRRMEKVNELL+EM ER  SCWPNSVTFSYLL S+R P
Sbjct: 361 MNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFSYLLRSIRGP 420

Query: 421 EEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIM 480
           EE+P+L++RME SGCKM+SD YNLILRLYM+W+I+ERV+ TWNEM+EMGLGPDRRSYTIM
Sbjct: 421 EEVPVLLQRMETSGCKMTSDIYNLILRLYMDWNIQERVKSTWNEMKEMGLGPDRRSYTIM 480

Query: 481 IHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQK 519
           IHGLYEKGR ++GLRY+ EMTL+G+M E+KTEKLVNA NVK  K
Sbjct: 481 IHGLYEKGRTKDGLRYFNEMTLRGIMPESKTEKLVNATNVKDSK 524

[Close]

BLAST of Cp4.1LG00g02620 vs. NCBI nr
Match: gi|449444202|ref|XP_004139864.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucumis sativus])

HSP 1 Score: 838.2 bits (2164), Expect = 7.9e-240
Identity = 414/524 (79.01%), Postives = 455/524 (86.83%), Query Frame = 1


Query: 1   MRFKFLWLRNNAAQNFHGKFRLGFQAYLIKGVLPRTPISYRPFFHISHHIHHTQSCE--- 60
           M+FKFL LRN +A++FHG F+  FQ+ L+K  LP  P S+RPF  +S  IHH  SC    
Sbjct: 1   MKFKFLRLRNISAEDFHGNFKFRFQSNLVKRFLPHIPTSHRPFSVVSDPIHHILSCHNLT 60

Query: 61  -TTRNCHETTKLSNPVAVSDDSINVY--DQSAVYVQNVLKFRRHKPVEEIETALNRCSLV 120
            + RNCH+ T +S+ +AVSD+ I V+  D SAVYVQNVL FRRHKPVE+IE AL+ C LV
Sbjct: 61  PSPRNCHDRTLVSDSIAVSDEPITVHPDDPSAVYVQNVLYFRRHKPVEDIERALSLCDLV 120

Query: 121 LTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSVIYNEILDILGKSRRFEEV 180
           LTDDFVL+VLRRHRSDW PAF FFNWV KRG  E +++PGSVIYNEIL ILGK RRFEEV
Sbjct: 121 LTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEV 180

Query: 181 DKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRRQELGLEMNLIAFQSLLMW 240
           DKV VEMSKRK+LVNEETY VLLNRYAAAHKVEEAI IF+RRQE GLEMNLIAFQSLLMW
Sbjct: 181 DKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMW 240

Query: 241 LCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVHEAKRFWREIIESKWEPDI 300
           LCRYKHVE AETLFHSKKHEF  DIKTSNI+LNGWCVLGNVHEAKRFWREIIESK EPDI
Sbjct: 241 LCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDI 300

Query: 301 YTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCIIDALCFKKRIPEALEIFKE 360
           YTYGTLINSLTKKGKLGTALKL+RAMWE+GL  DVVICNCIIDALCFKKRIPEALEIFKE
Sbjct: 301 YTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKE 360

Query: 361 MNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRSCWPNSVTFSYLLASVREP 420
           MNERGCA+NVATYNTLIKHLCKIRRMEKVNELL+EM ER  SCWPNSVTF YLL SVR P
Sbjct: 361 MNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGP 420

Query: 421 EEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTWNEMEEMGLGPDRRSYTIM 480
           EE+P+L +RMERSGCKM+SD YNLILRLYM+WDI+ERV+ TWNEM+EMGLGPDRRSYTIM
Sbjct: 421 EEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIM 480

Query: 481 IHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKLQK 519
           IHGLYEKGR ++GLRY+ EMTLKG+M E KTEKLVNA NVK  K
Sbjct: 481 IHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVKEPK 524

[Close]

BLAST of Cp4.1LG00g02620 vs. NCBI nr
Match: gi|1009161913|ref|XP_015899152.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Ziziphus jujuba])

HSP 1 Score: 640.2 bits (1650), Expect = 3.2e-180
Identity = 307/479 (64.09%), Postives = 380/479 (79.33%), Query Frame = 1


Query: 39  SYRPFFHISHHIHHTQSC------ETTRNCHETTKLSNPVAVSDDSINVYDQSAVYVQNV 98
           S+RP  H        Q        +  +N  E+  + N     D   +  DQ+A++VQN+
Sbjct: 32  SHRPILHYFSCFARVQDFLSPKNQKPEKNLKESEFVHNAANNMDSGKDPDDQTAIFVQNI 91

Query: 99  LKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYS 158
           ++FRR K  EEIE AL+RC LVLT++ VL VLRRH SDWKPA+ FFNWV K G G G YS
Sbjct: 92  IRFRRDKSTEEIEGALDRCGLVLTENLVLNVLRRHSSDWKPAYLFFNWVRKGGGGNG-YS 151

Query: 159 PGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDI 218
           PGS  YNEILDILG+ RRFEE+ +V  +MS R+ LV+E TY +LL RYAAAH+VE+AID 
Sbjct: 152 PGSDAYNEILDILGRMRRFEELTQVLEKMSNRRGLVSEMTYGILLRRYAAAHEVEKAIDF 211

Query: 219 FHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVL 278
           F RR+ELGLE++L+AFQ+LLMWLCRYKHVE+AETLF+S+ +EF PDIKT NI+LNGWCV 
Sbjct: 212 FRRRKELGLELDLVAFQTLLMWLCRYKHVEVAETLFYSELNEFRPDIKTMNIILNGWCVR 271

Query: 279 GNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVIC 338
            NV EAKRFW +II+SK +PD++TYGT INSLTKKGKLG+A+KL+RAMW+KG  PDV IC
Sbjct: 272 ANVREAKRFWNDIIKSKCQPDLFTYGTFINSLTKKGKLGSAMKLFRAMWDKGCNPDVTIC 331

Query: 339 NCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVE 398
           NC+IDALCFKKRIPEALE+ KEMNE+GC  NV TYN+LIKHLCKIRRMEKV ELLDEM +
Sbjct: 332 NCVIDALCFKKRIPEALEVLKEMNEKGCLPNVMTYNSLIKHLCKIRRMEKVYELLDEMEQ 391

Query: 399 RNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERV 458
           +  SC PN+VT+S+LL S+++PEE+P L+ERMER+GC+M+ D YNL+L+LYMEWD  E+V
Sbjct: 392 KKGSCLPNAVTYSFLLKSLKKPEEVPSLLERMERNGCRMTGDMYNLVLKLYMEWDCREKV 451

Query: 459 ECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNA 512
             TW+EME  GLGPD+RSYTIMIHGLY+KGRK+  LR++REMT KGM+ E +TE LVN+
Sbjct: 452 RYTWDEMERNGLGPDQRSYTIMIHGLYDKGRKDNALRFFREMTSKGMLPEPRTEILVNS 509

[Close]

BLAST of Cp4.1LG00g02620 vs. NCBI nr
Match: gi|1009162075|ref|XP_015899238.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Ziziphus jujuba])

HSP 1 Score: 638.3 bits (1645), Expect = 1.2e-179
Identity = 306/479 (63.88%), Postives = 379/479 (79.12%), Query Frame = 1


Query: 39  SYRPFFHISHHIHHTQSC------ETTRNCHETTKLSNPVAVSDDSINVYDQSAVYVQNV 98
           S+RP  H        Q        +  +N  E+  + N     D   +  DQ+A++VQN+
Sbjct: 32  SHRPILHYFSCFARVQDFLSPKNQKPEKNLKESEFVHNAANNMDSGKDPDDQTAIFVQNI 91

Query: 99  LKFRRHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYS 158
           ++FRR K  EEIE AL+RC LVLT++ VL VLRRH SDWKPA+ FFNWV K G G G YS
Sbjct: 92  IRFRRDKSTEEIEGALDRCGLVLTENLVLNVLRRHSSDWKPAYIFFNWVRKGGGGNG-YS 151

Query: 159 PGSVIYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDI 218
           PGS  YNEILDILG+ RRFEE+ +V  +MS R+ LV+E TY +LL RYAAAH+VE+AID 
Sbjct: 152 PGSDAYNEILDILGRMRRFEELTQVLEKMSTRRGLVSEMTYGILLRRYAAAHEVEKAIDF 211

Query: 219 FHRRQELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVL 278
           F RR+ELGLE++L+AFQ+LLMWLCRYKHVE+AETLF+S+ +EF PDIKT NI+LNGWCV 
Sbjct: 212 FRRRKELGLELDLVAFQTLLMWLCRYKHVEVAETLFYSELNEFQPDIKTMNIILNGWCVR 271

Query: 279 GNVHEAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVIC 338
            NV EAKRFW +II+SK +PD++TYGT INSLTKKGKLG+A+KL+RAMW+KG  PDV IC
Sbjct: 272 ANVREAKRFWNDIIKSKCQPDLFTYGTFINSLTKKGKLGSAIKLFRAMWDKGCNPDVTIC 331

Query: 339 NCIIDALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVE 398
           NC+IDALCFKKRIPEALE+ KEMNE+GC  NV TYN+LIKHLCKIRRME V ELLDEM +
Sbjct: 332 NCVIDALCFKKRIPEALEVLKEMNEKGCLPNVMTYNSLIKHLCKIRRMENVYELLDEMEQ 391

Query: 399 RNRSCWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERV 458
           +  SC PN+VT+S+LL S+++PEE+P L+ERMER+GC+M+ D YNL+L+LYMEWD  E+V
Sbjct: 392 KKGSCLPNAVTYSFLLKSLKKPEEVPSLLERMERNGCRMTGDMYNLVLKLYMEWDCREKV 451

Query: 459 ECTWNEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNA 512
             TW+EME  GLGPD+RSYTIMIHGLY+KGRK+  LR++REMT KGM+ E +TE LVN+
Sbjct: 452 RYTWDEMERNGLGPDQRSYTIMIHGLYDKGRKDNALRFFREMTSKGMLPEPRTEILVNS 509

[Close]

BLAST of Cp4.1LG00g02620 vs. NCBI nr
Match: gi|694317968|ref|XP_009340662.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Pyrus x bretschneideri])

HSP 1 Score: 629.8 bits (1623), Expect = 4.3e-177
Identity = 323/542 (59.59%), Postives = 398/542 (73.43%), Query Frame = 1


Query: 1   MRFKFLWLR-----NNAAQNFHGKFRLGFQAYLIKGVLPRTPISYRPFFHIS-HHIHHTQ 60
           M FKF  LR     NN  +NF+ KF+            PR   S+ P  H +  ++    
Sbjct: 1   MPFKFRPLRTFSRENNIQRNFNLKFQ----------TQPRNHHSHNPISHKALSYLSKFH 60

Query: 61  SCETTRNCHETTKLSNPV------------AVSDDSINVY------DQSAVYVQNVLKFR 120
           +C++ RN    T   N              +V+D   N        D++AV +QN+LKFR
Sbjct: 61  NCQSPRNAKPETFTKNSQFYFLGRNKTFVHSVADAEENARFGEDPDDRTAVLIQNILKFR 120

Query: 121 RHKPVEEIETALNRCSLVLTDDFVLQVLRRHRSDWKPAFDFFNWVTKRGNGEGEYSPGSV 180
           R KP EEIE AL+RC  VLTD  VL VLRRHRSDWKPA+ FFNWV K G G G Y PGS 
Sbjct: 121 RDKPAEEIEWALDRCGFVLTDCLVLDVLRRHRSDWKPAYAFFNWVCKGGGGSG-YLPGSD 180

Query: 181 IYNEILDILGKSRRFEEVDKVFVEMSKRKKLVNEETYLVLLNRYAAAHKVEEAIDIFHRR 240
            YNEILDILGK R F+EV ++  EM KR+ L+NE TY +LLNRYAAAH+VEEAID+F++R
Sbjct: 181 CYNEILDILGKMRAFDEVHQMLDEMRKREGLINEGTYEILLNRYAAAHRVEEAIDVFYKR 240

Query: 241 QELGLEMNLIAFQSLLMWLCRYKHVEIAETLFHSKKHEFFPDIKTSNIVLNGWCVLGNVH 300
           +E GL+++L+AFQ L+MWLCRYKHVE AETLF+ K  EF  DIKT NI+LNGWCV  NV 
Sbjct: 241 KEFGLKLDLVAFQKLMMWLCRYKHVEAAETLFNVKGIEFGKDIKTWNIILNGWCVRANVR 300

Query: 301 EAKRFWREIIESKWEPDIYTYGTLINSLTKKGKLGTALKLYRAMWEKGLKPDVVICNCII 360
           EAKRFW++II S  +PD +TYGT IN+LTKKGKLGTALKL++AMW++G  PDVV CNCII
Sbjct: 301 EAKRFWKDIIASNCKPDQFTYGTFINALTKKGKLGTALKLFQAMWDQGCNPDVVTCNCII 360

Query: 361 DALCFKKRIPEALEIFKEMNERGCASNVATYNTLIKHLCKIRRMEKVNELLDEMVERNRS 420
           DALCFKKRIP AL++FKEMN RGC  N ATYN+LIKHLCKIRRMEKV ELL+EM +R  S
Sbjct: 361 DALCFKKRIPYALDVFKEMNVRGCLPNAATYNSLIKHLCKIRRMEKVYELLEEMEQRKGS 420

Query: 421 CWPNSVTFSYLLASVREPEEIPILVERMERSGCKMSSDTYNLILRLYMEWDIEERVECTW 480
           C PN VTF+YLL S ++PEEIP L+ER++++GCKM+ DTYNL+L+LYMEWD +ERV  TW
Sbjct: 421 CLPNEVTFNYLLKSSKKPEEIPGLLERLQKNGCKMTGDTYNLLLKLYMEWDCQERVRYTW 480

Query: 481 NEMEEMGLGPDRRSYTIMIHGLYEKGRKEEGLRYYREMTLKGMMVEAKTEKLVNAMNVKL 519
           +EME+ GLGPDRRSYTIMIHG ++K R +E LRY+REMT KGM+ E +TE L+++MNV+ 
Sbjct: 481 DEMEKNGLGPDRRSYTIMIHGFHDKRRIKETLRYFREMTSKGMIPEPRTEILMDSMNVQS 531

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP233_ARATH	4.6e-147	58.10	Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th...	[more]
PP383_ARATH	2.8e-72	36.32	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
PP136_ARATH	4.4e-57	32.59	Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop...	[more]
PP293_ARATH	1.7e-53	31.83	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
PP294_ARATH	2.3e-53	31.83	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG00g02620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3R5_CUCSA	5.5e-240	79.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206990 PE=4 SV=1	[more]
A0A067JX44_JATCU	5.1e-169	60.95	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20187 PE=4 SV=1	[more]
B9T1Y0_RICCO	6.6e-169	66.44	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
A0A061F7S4_THECC	4.4e-165	65.43	Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c...	[more]
A0A067EDG4_CITSI	5.8e-165	61.74	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048749mg PE=4 SV=1	[more]

BLAST of Cp4.1LG00g02620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15200.1	2.6e-148	58.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G15010.1	1.6e-73	36.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80550.1	2.5e-58	32.59	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62470.1	9.8e-55	31.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	1.3e-54	31.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Cp4.1LG00g02620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093850\|ref\|XP_008447751.1\|	1.9e-246	80.15	PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucum...	[more]
gi\|449444202\|ref\|XP_004139864.1\|	7.9e-240	79.01	PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Cucum...	[more]
gi\|1009161913\|ref\|XP_015899152.1\|	3.2e-180	64.09	PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Zizip...	[more]
gi\|1009162075\|ref\|XP_015899238.1\|	1.2e-179	63.88	PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Zizip...	[more]
gi\|694317968\|ref\|XP_009340662.1\|	4.3e-177	59.59	PREDICTED: putative pentatricopeptide repeat-containing protein At3g15200 [Pyrus...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02620.1	Cp4.1LG00g02620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 470..498 score: 5.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 257..305 score: 3.5E-9coord: 327..376 score: 2.6E-17coord: 153..200 score: 1.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 295..329 score: 3.9E-8coord: 330..363 score: 8.5E-6coord: 156..185 score: 5.3E-5coord: 366..394 score: 2.6E-7coord: 192..224 score: 0.0023coord: 470..498 score: 4.5E-4coord: 263..294 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 258..292 score: 10.216coord: 467..501 score: 10.073coord: 154..188 score: 8.418coord: 224..254 score: 5.579coord: 363..397 score: 10.896coord: 432..466 score: 8.243coord: 328..362 score: 11.345coord: 189..223 score: 9.229coord: 293..327 score: 12
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 465..493 score: 2.3E-6coord: 272..371 score: 2.3E-6coord: 171..238 score: 2.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 89..509 score: 2.0E
None	No IPR available	PANTHER	PTHR24015:SF399	SUBFAMILY NOT NAMED	coord: 89..509 score: 2.0E
None	No IPR available	unknown	SSF81901	HCP-like	coord: 200..370 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g02620	CmaCh01G009490	Cucurbita maxima (Rimu)	cmacpeB457
Cp4.1LG00g02620	CmoCh01G009890	Cucurbita moschata (Rifu)	cmocpeB418
Cp4.1LG00g02620	Bhi09G001368	Wax gourd	cpewgoB0017
Cp4.1LG00g02620	CsGy7G009210	Cucumber (Gy14) v2	cgybcpeB895

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g02620	Cucurbita maxima (Rimu)	cmacpeB025