Cp4.1LG00g02420 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g02420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin, putative
Location	Cp4.1LG00 : 7418097 .. 7437053 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTAGAGAAAAGTTCAGGACGAGGAACAAAAGATACGAACAAGAGGAGACAATTCAAATAAAAAAATCGAAATCATGAAGCTGAGCTGATGAAACTCAACAACATGAATGAATTTGGAATGGATAGAATAAACAGAAAAATTGTAGAAGATAGCACAAAGCTTCTAAACAAGATAGCACAAAGCTTCTAAACAGATGCTTTAAGTATCACAAATAAGCTTATTCTCGCAAAATATTGAGTTAGAATGAGAAACAACGAGCTAAAACAACTAAAAACGAATTTAACTTGATTCATTGCACAAATAGAGTAAAAAGAAGAACAGAAGTTCATGCTTAGAGAAAAGGTATGAAATCTAGAAGCGAAAATAAGCAAAAAAAAAAAAAAGGGGAGGAGAGAACTCAACCTGATTCGAAGCCTAAGCCAATTGAAAAAGAAAATGATGAAAACGGAGAATAGTGAAGGAGAAGAAGAAGAACGTCCAAACCTGAAGAAAAGTGATTGGAAAAATGTCATAAACACAAAAACAATTTAATTCTCCCTCTCACAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTTATTTGAATTTTTTTATTCTATTGATTTTTTCTCTTTTTGTTTTCTTTTCTACCTTCGTGAATACTTTCCTTTTTATTTCCCCCCTTTCTTCCATTCATTTTTCTCCAATTCCTTCTTTTCTCTTTTCCATCTCTTTCATTTCTTCTTTTTTTTTTTTCTTTTATTTCTGATTCGTTACTTTCTCCTCTACTCTCGACAGAAAGTTTAGGCAAGATTGTAAATGATGAAACCCTAATCTATTTGCTGAAGATGATGACAGAAAGTTTCGAGTTCATGGTGGTTCAAAAATTGAAGCCCTAAACCCTTTGCAGAAACCATTTGAAGAAGATGGCCCCTTGTTATTGAAGGAACCATGGTAATTTATTCTCTCTTCAATAACAAGGGACCATCTTCTTCATACGGTCTTATGACATGATTTTAAAGTTTTGATTTTTCGATAACACATTGTGGCCTTTTTTATCAAATGTTCTATTTTCACTGAACTCCTTTCTTTTGCCTAATATCTAGTTTTCATTCATTTCTTACTCCAACATTTCTCCGTTTTTTTAATTTAATTTTTAGTTTATATTCCAACTCAAGCCTTTGGAGAGGTTGACTTGGAGTGTGTGGTTTCTCTTTGATTATTTTTATTTGGTTGTTTGAGGTTTTGATTCTATTATTGATTACCTTAAAATCATGGTAAATGGTTCTACCAATTATTTGTGCTAGGTTGTTTTGGGTTTTAATTCTATTATTGTTGCCATTGAAATTATGGCAAACGGTAAAAACACCCGTAAAGAATTATATTTATTTCAAATTCAAAATTTGTTAGTGTTTCCTTGTTCTATTTTTTATCACTTCTTTTTTCATGCTCGGGATAAAAGCAAGACCACCTAATTTCCACTTCGCTATATATATGATGACATGATGACATGATGTCTAATTATTTTTATGCAATCAGTTAAATATTGAAATATTCAAGTTATTAATATTTGGTAATCTTATTTTGTTTTCTTGCACAAAATTTACAGTGAATAGAGTGGTTAATTATCAAGATAAGAAGATAATGTACTAAGCTTTCTTTATGTGTTGTATCTAGGTTGATGTTCTATGTTTTCTCTTCTAGTCAGTAACAAATTGTTCCAATGTTTAGTTAACTTGCATACGAGTGTAGTTTAGGTAGGATGACAAAAGATTGTGATATATTAAGAGACTGAAATTTTTTATGACTTCGTAAAAGATTCTTTTCAATTTCATATACTCATTACATTTTTCTATGTAAAATCAATTTGGTTAACTAAGCTGGAATATCTTGTATGGCTAAGTGGTGGATGTGGAACACATTTTCATGCAACAATCAAGAGAAAAATGTCTTATGAATGTTTTGTTTGACCGGGAGGATAATAAGTTTTAAAAATTGCATGAAACATGGATAATTTTAATTTATTTTTAGGGGCAAGGATCTGTACTAATTGAGATTTGGTTTTGATAATATAGCTTTTTCTTTTCTCTTTGTTTGGAATTGACTTTTTCTTTACTCAATTCTTCCCATTGAACTTTGCAAGTACCTATTGAACCATAAGTGTTAGAAGATATACAAGAGAGTAAGTTAAAATTTTGTACTTAAAGATTTTTTCTAAATACCTTTACTTCTCAAAGTCTTGATCGACTATGTTAATTATTTTGGATGCTTTCTTTGGTTTTTGGCATTTTTTGAGTTTTTGCTGTCGTCTGTATCAGCTCATTTTGTTTGCTTTTATTAATAGTGTAAAAACATTTTAGTTGGTGCTGATAAATGGTCTGACTTTTTTCCTTACTAGGTAAATAGGAACTAAGTTGGGAAGAAAAAATGTGGAATAACAAAGTTGCATAACATTGGTGACATGGCTTAACCCTTTACACTCAAAGATTGGTGACTTGCGAAAAAGGAGGTAGAGATGGTTTAACCCTTTACACTCAAAGATTGGTGACTTTACACTTAAAATGACTCTCCCTTCTTTTGGTTCCTCAAACAACAGGATCAAAATTCTCTAATCTCATCTATCATACTAGTGCAAGGTATTGAAAAACATCTAATGTACCTTTAGTCATATCAACAACAAGAAGATGATCAAAGTCTAAAAGTTATTTTCTTGGTTGTAATGTTCTTGTAGAAATTCATGTTAAAAAATTGTATCTTTTTTTTCCTTTTGACTGATGTCTTCTCATTTGAACTTGCTTAATTGGTGCACTTGGAATTGTATTTTACACCATTTAGTATTCTATCTTATTTAATTACTGATGCCTTCTCATTTGAACTTGCTTAATTGGTGCACTTGGAATTGTATTTTACACCATTTAGTATTCTACCTTATTTAATTAACTCAATAACTTATGCCTTGTATGTTTGCTACATGGTTGGAGATGTTATATTCTTCTCTATGTTGGCCACCAATGAATTTAAAATCTCTTGTGCTTTGTTTTCGATTGTTTTGCCATTGAAATTATGGCAAACGGTAAAAACACCCGTAAAGAATTATATTTATTTCAAATTCAAAATTTGTTAGTGTTTCCTTGTTCTATTTTTTATCACTTCTTTTTTCATGCTCGGGATAAAAGCAAGACCACCTAATTTCCACTTCGCTATATATATGATGACATGATGACATGATGTCTAATTATTTTTATGCAATCAGTTAAATATTGAAATATTCAAGTTATTAATATTTGGTAATCTTATTTTGTTTTCTTGCACAAAATTTACAGTGAATAGAGTGGTTAATTATCAAGATAAGAAGATAATGTACTAAGCTTTCTTTATGTGTTGTATCTAGGTTGATGTTCTATGTTTTCTCTTCTAGTCAGTAACAAATTGTTCCAATGTTTAGTTAACTTGCATACGAGTGTAGTTTAGGTAGGATGACAAAAGATTGTGATATATTAAGAGACTGAAATTTTTTATGACTTCGTAAAAGATTCTTTTCAATTTCATATACTCATTACATTTTTCTATGTAAAATCAATTTGGTTAACTAAGCTGGAATATCTTGTATGGCTAAGTGGTGGATGTGGAACACATTTTCATGCAACAATCAAGAGAAAAATGTCTTATGAATGTTTTGTTTGACCGGGAGGATAATAAGTTTTAAAAATTGCATGAAACATGGATAATTTTAATTTATTTTTAGGGGCAAGGATCTGTACTAATTGAGATTTGGTTTTGATAATATAGCTTTTTCTTTTCTCTTTGTTTGGAATTGACTTTTTCTTTACTCAATTCTTCCCATTGAACTTTGCAAGTACCTATTGAACCATAAGTGTTAGAAGATATACAAGAGAGTAAGTTAAAATTTTGTACTTAAAGATTTTTTCTAAATACCTTTACTTCTCAAAGTCTTGATCGACTATGTTAATTATTTTGGATGCTTTCTTTGGTTTTTGGCATTTTTTGAGTTTTTGCTGTCGTCTGTATCAGCTCATTTTGTTTGCTTTTATTAATAGTGTAAAAACATTTTAGTTGGTGCTGATAAATGGTCTGACTTTTTTCCTTACTAGGTAAATAGGAACTAAGTTGGGAAGAAAAAATGTGGAATAACAAAGTTGCATAACATTGGTGACATGGCTTAACCCTTTACACTCAAAGATTGGTGACTTGCGAAAAAGGAGGTAGAGATGGTTTAACCCTTTACACTCAAAGATTGGTGACTTTACACTTAAAATGACTCTCCCTTCTTTTGGTTCCTCAAACAACAGGATCAAAATTCTCTAATCTCATCTATCATACTAGTGCAAGGTATTGAAAAACATCTAATGTACCTTTAGTCATATCAACAACAAGAAGATGATCAAAGTCTAAAAGTTATTTTCTTGGTTGTAATGTTCTTGTAGAAATTCATGTTAAAAAATTGTATCTTTTTTTTCCTTTTGATTGATTTCTTCTCATTTGAACTTGCTTAATTGGTGCACTTGGAATTGTATTTTACACCATTTAGTATTCTACCTTATTTAATTAACTCAATAACTGATGCCTTGTATGTTTGCTACATGGTTGGAGATGTTATATTCTTCTCTATGTTGGCTACCAATGAATTTAAAATCTCTTGTGCTTTGTTTTCGATTGTTCGTGCTTGTGGCTACTTTGGCTACTTGTGGTATAGTGAGCCCATTAAGTAAGGCTTGGTAATACTCAAAGGTATGATTAGTCTCTTTGAACATAAATATTAATTTGAAAGTTGGGTATTTAAATTGGTCTCTTTCTTGGTTAACAGACTAGTGACTGGGTCGGGCCTAAGTCTTATAATGTGATAGGAGCACCCAGAATCAAGAATCCATTCACTAGTTTGGCTGACTGATAGGGAGATTGTCAAGGCATCATCTGTATCAGTGTCGTTATCTCTAACCACATTGGACGACCCCTTCTCTTTTAAGATCGGACAATCTTTCTTCCAATAGCCTTTCTGTTGACAATATGCACACTCATTTTTATCAAGTTTTTTGGATCTTCTTCTCTCCAAACCACGTAAATATCTTGGTGTTTCTTTGTGTAATTTCGTTCATTGGTGTTGTGAGTACATTTGTTCCGCTTTCGGCGCACAACAAGTGGTATCAAAGCCTGATTGTGGCATTTGGGGTATTGTGAAAGTTTTGGCCTCATCGACCACTAGATGTGCTCACAATCGTGCTTATTTTCTTGAAAATGGCAAAATCATCTGGAATTAAATCACGGCGTGGATCGAGATTTTTGAGTTCTAATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGCGAGGCGAAGTTAGCGATTTGATGATCATGCAAGATCTTGATGCTTCTCTCCAAGAGGTGATGCCTGAAGACATGACAGAAGCAGAATGGACGAAATTAAATTGGAAAGCTTGTGGAATTATTCGATCATGTCTTGGTAAGGATCATAAATATCCATTTATGAAGGTAACCACGGCGAAAGAACTATGGGACAAGCTTGAGGTGAAATATATGAAAAAGAGTGGAAAATAAACTCTATGTGAAGAAGAAACTCTTCCGTTTTGACTACAAGAAAGGTATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATTATCACTGATTTGCTCAATCTTGATGTTAAGATTGATGACGAAGACAAGGTGTTGTTGTTATTAAATTCTTTGCCGGAATCCTACGAGTTCTTAGTAACGACCCTACTATATGGAATCATTAATATTGATTTTGAAGATGTCTCAAATGCCTTAATAAATAATGAGATGCGAAAGAAGGAAAGGGAGACATATCAAGATAAATAATGAGATGTGAAAGACGGAAAAGGAGACATATCAAGACTCTAGCTCAAATGTTCTCACTGCTCGTGGAAGGACTTCTACTTGGCAAAGGAACGAATGTGGAGAGTCCCGATCAAAGTCGAGAGGTAGATCAGATAATTGGATAAAACTTGATAAAAACGAGTGTGCATATTGTCGATAGAAAGGCCATTGGAAGAAAGATTGTCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATGATGTCTTGACAATCTCCTTATCAGTCAGCCAAACCAGTGAATGGATTCTTGATTCTGAGTGCTCCTATCATATGTGTCCGAATAGAGAGATTTTTGGACTTAAAAGAGTTCATTGGTGGAGTTGTCTATATGGGCAATGATAGTACTTGCAAGATGATGGGAATCGACTCAGTACAAATCAAGATGTTTGACGGGGTTATACGAAAACTCAATGATGTGAGGTATGTCCTTGACTTGAAGAAAAATTTGATTTCCTTTAGCGTTTTGGATGCGAGTGGTTATCGTATCATTTTGAAAGGAGGGAATTTGAAAGTAGCTCGTGGGGCATATACTACCTCAACGGAACCACAATAATTGGGCATGTTGCTGTGGCAAGTTCGAAAGAACAAGACATATCGAAATTATGGCACATGAGACTTGGGCACGCTGGTGAGAAGGCGCTTTAGACATTGATGAACCAAGGAGTCCTTAAGGGTACCTCAACTGGTAAAATTGATTTCTATGAACATTGTATATTTGGTAAACAAAAAATGTGAAAGTTTTGTACAACTATACATCAAACAAAGGGCATTTTGGATTATGTTCACACTGATGTATGGCGCCCCACGAAGAATGTCTCATTGGGAGGAAAGAGGTGGTTTGTCACCTTTATTGATAACTACTCGATGAGAGTTTGGATGTATCCCATGAGGCACAGAAACGAGGTTCTCCAAATCTTCCTAGAGTGGAAGAAAATGGTAGAGAGTCAGACAGACAGGAAAATCAAAAAGTTGAGATCAGACAACTGTGGAGAATATACTTATGATCCATTTCTTAAAGTATGCTGAGATGAAGGGATCGTTCGACACTTCACTGTTCCTGGTAAGCCACAACAAAATGGAGTTGCTAAGAGAATGAACCAGACATTAATAGAGAAGGTTCGATGCATTTTGTCTTAAGCAGGATTGAGTAAGGCATTTTGGGCTTAGGCTCTCAGTTATGCAGTTCACTTGGTGAATCGTTTACCTGTTTCTGGAAATGGTGGGAAAACTCCGCTTGAGGTATGATCAGGTACTCCTGTTAGTGATTATGATAAATTGCATGTGTTTGGGTCTCCTGCTTATTATCATGTGACAGACTCAAAGCTGGATCCTAGAGCAAGAAAAGTCAAGTTTATGGGCTTTAGCAAAGGCGTGAAGGACTATAGATTATGGTGTCCAGAAACAAGTAAGATTGTTAATAGTCGAGATGTGACATTCGATGAGTCTGGAATGTTTTTGCAGGAAATTGAAAATAATGACGAGGCATTGAAGCAAGTGGAGAAGGTGGTGTTCTCTCCTGATATGGTTGCTCCTACTGAAGAACCTATTATCAGGTAGATAATAACTCTGATATCTTAGAACAGGAGGAGCAAAGCCTTGTAAATGAAAGAATGGAGGAACCTGAGTCCATCGTCAGGAATAGACCACGAAGAGAAATTCAAAACGTGCAAGGTTTGATGATATGATAACATATGCTTTCCCTTTGATTGATGGAGTTCCCAATAACTACAAAGATGCTATCCAGAGCCCGGATAGATGGCACTAACAAAAGGCTATGAATTAGGAGATAGCATCATTGTAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAACGGTAAGAAGAAAATTGGTTATAAATGGGTTTTTGCAAAACAAGAAGATTCTTCTGGTATACGTTATAAGGCTCAACTTGTGGCTAAAGGCTATGCAAGAAGATATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCCATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTGATCTTGAGCTTGTACAACTCGATGTAAAAACCGCCTTTTTGCATGGGGATTTGGAAGAAGAAATATATATGGCGCAACCAATTGGTTTTCGAGTAGTTGGACAACAACATTTGGTATGCAGATTGAAGAAATCTTTGTATGGGCTGAAGCAATCTCCTCGCCAATGGTATAAAAAGTTTGATCATTTCATGGTAGAGCATATGTATACTCATAGTCAATTTGATCATTGTGTGTATTATCGGTGTCTTGATGATGGATCCTTTATCTATGTTGATGATATGTTAATTGCTTCAAAGAGACAAGTGGAGATTGATAAGCTCAAAGATCAGCTTTCTAAAACATTTGAAATGAAAGACTTTGGCAATGAAAGAAAATACTTGGAATTTAGATAGAGCGAGATCGAAAAAAATGCTTTCCCTTTGATTGATGGAGTTCCCAATAACTACAAAGACGCTATTTAGAGCCCGGATAGATTGCACTAACAAAAGGCTATGAATCAGGAGATAACAAAAGGCTATGAATTAGGAGATAGCATCATTGTAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAACGGTAAGAAGAAAATTGGTTATAAATGGGTTTTTGCAAAACAAGAAGATTCTTCTGGTATATGTTATAAGGCTCAACTTGTGGCTAAAGGCTATGCAAGAAGATATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCCATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTGATCTTGAGCTTGTACAACTCGATGTAAAAACCGCCTTTTTGCATGGGGATTTGGAAGAAGAAATATATATGGCACAACCGATTGGTTTTCGAGTAGTTGGACAACAACATTTGATATGCAGATTGAAGAAATCTTTGTATGGGCTGAAGCAATCTCCTCGCCAATGGTATAAAAAGTTTGATCATTTCATGGTAGAGCATATGTATACTCATAGTCAATTTGATCATTGTGTGTATTATCGGTGTCTTGATGATGGATCCTTTATCTATGTTGATGATATGTTAATTGCTTCAAAGAGACAAGTGGAGATTGATAAGCTCAAAGATCAGCTTTCTAAAACATTTGAAATGAAAGACTTTGTCAATGCAAAGAAAATACTTGGAATTGAGATAGAGTGAGATCGAAAAAAAGGTACAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGACAAGATTTAGTTTGAATAATTTAACCAAACCCATTGGTACTCCACTTGCTTCTCATTTCAAGCTTAGTGCTTCATGTGTCCAAGTTCTGACAATGACAAAAGGTATATGGAGAATATTCTTTATACAAATGTTATTGGTGCTTTGATGTATGCTATAGTCTGTACTCGATCTGATCTTTCACACGCAGTAAGCATGGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTCAAATGGATTCTTAGGTACATTCTTGGTACTACTGATGTTGGCTGTCAAATGGATTCTTAGGTAAATTATTGGTACGATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCTTGTAGTTGGTTATGTGGATTTTGATTATGCTGGTGATTTGGATAAGCGACGATCTACTACGAGTTATTTATTTACTATGGCTGATGGACCTGTTTGTTGGCATTCAACATTGCAGTCTACTGTTGCACTGTCTACCACCGAAGCAGAGTATATGGCAGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGGATTTTGCTGGAACATATAGATGTGTTTTATGATAGCCAGAGTGCTATTTGTTTGTCAAAAAATCAAGTCCATCATGCTCGTACTAAACATATTGATGTCCGTTTTCACTTTATTCGAAAAATTATTAGTGAAGGGGACATTCGTTTATTAGAAATTGGAACTGCTGATATGTTGACAAAGGTGATCGCTCGTGAAGAGTTCTGGCATTGTTTGGATTTCATCAACGTTGAAAGAAAGGAGTAGTGCGTTGATGTGGTAGCAACCAGCTCATTTATTAACTTGGAGATCTTATGACAAAGTGGAGATTGTTGTAAATTGTCATAAGATTTTGATTTGATTTGGTTATTTGGATTAGATTTGATTGGTTATTTGGATTAGATTTGATTTGGTTATTTGGATTAGATTTGATTTGGTTATTTGAATTAGATTTAGTCATACCAGATTTAGTTATATATTGAGATTTGGGAGAGTTTTGTGTGTCACATTGTATTTGTTAAGTGACATATTGGTGAGAGTCTTTGTAGTGTGATAGTGAGGTATTCACTTCTAACACTTTGTTTATTAGTGATTGGTTGCTACCCGTGGTTGTAGGAGAACTTCTTCTCTCTGAACCACGTAAATATTTTGGTGTCTCTTTGTGTAATTTTGTTCATTGATTGTAGTCCTTGTTGTGCGCCGAAAACGGAACAAATGTACTCACAACACCAATGAACGGAATTACACAAAGAGACACCAAGATATTTACATGGTTCGGAGAGAAGAAGTTCCCCTACATCCACGGGTAGCAACCAATCACTAATAAAACCAAGCCTTCCAAGTGAATACCTCACTGACACACTATATAGACTCTCACCAATATGTCACTCAAGAATACAATATGACACACAAAACATTCCCAAATCCCGATATCAAATTCCGAGATGACTAAATCTGGTATGACTAAATCTAATTCAAATAACTAAATCAGATCTAATCTAAATAACCAAATCAAATTTGATCCAAATAACCAAATCAAATCTAATCCAAATAACCAAATCAAATCGGATCCAAATAACCAAATCAAATCAAAACTTATGACAATTTACAACAATCTCCACCTTGTCATAAGATCTCCAAGTTGATAACTGAGTTGGTTGCTACCACGTCAACACACTACTCCTTTCTTCCAACGTTGATGAAATCCAAACAATGCCAGACCTTTTCACGAGCGATCACCTTTGTCAACATATTAGCAGGGTTATCAGCAGTTCCAATTTTAATAAACGAATGTCCCCTTCACTAATAATTTCTCGAATAAAGTGAAAACGGACATCAATATGTTTAGTACGAGCATGATGGACTTGATTTTTTGACAAACAAATATCACTCTGGCTATCACAAAACACATCTATATGTTCCTGCAAAATACCCAAGTCATTGATCAAACCATGCATCCAAATAGCTTCTTTTGAAAGTTGTACCAAATCCCAGGTTTGATTTATCTCCAATGATGCAATCTCCTGATTCATACCCTCTTGCCAGTGCAATCTATCCGGGCTCTGGGTAGCATCTTTGTAGTCGTTGGGAACTCCATCAATCAAAGGGAAAGCATATGCTATCGTATCATCAAATCTTGCAGGTTTTCGAATTTTCCTTCGTGGTCTATTCCTGGCGATGGACTTAGGTTCCTCCACTCTTTCATTTACAAGGCTTTGCTCCTCCTGTTCTAAGACATCAAAGTTATTATCTACGTGATCAATATGTTTTTCAGTAGGAGCACAATAGGAGCAACCATATCAAGAGAAAACACCACCTTCTCCACTTGTTTCTGGACACCATAACCTATAGCCCTTCATTCCTTTGTTTAGCCCATAAACTTGGCTATTTTTGCTCCCTTCACGCCTTTACTAAAGCCCATAAACTTGGCTTTTTTTGCTTTAGGATCCAGCTTTGAGTCTCAAGCGGAGTTTTCCCACCATTTCCAGAAACAGGCAAACGATTCACCAAGTGAACAGTTGTGACACCCTTAAGAACTCCTCGGTTCACCAATGTCTGAAGCGCCTTCTCACCAGCATGCCCAAGTCTCATGTGTCATAATTTCGATATGTCTTGTTCTTTCGAACTTCCCACAGCAGCATGCTCAATTATTGTGGTTCCGTTGAGATAGTATATGCTACCTCTTCTAGTTCCTTTAATTGCCACCAAAGCTCCACGAGCTACTTTCAAATTCCCTCCTTCCAAAATTATACGATAACCACTCGCATCTAAAGCGCCAAGGTTCAAATTTTTCTTCAAGTCAAGGACATACCTCACATCATTGAGTTTTTGTATAACCCCGTCAAACATCTTGATTTGTACTGAGCCGATTCTAATCATCTTGCAAGTACTATCATTGCCCATATAGACAACTCCACCATATCCCAATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCTAAGACGACCGCGACGTCGAATTCTACGAAATCCTCCAGCACTCTCGCATTCAACTCCTCGTAGCTTCCGAATACCAAAACAATTTCCAATCCCAATCGCAACCCCAAATCGACCCGAACCATTCAATCGAGCGCCTCAAACAGAGGATCCACGAAATCAACTTTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGCCTCCCTTGCCGACTTACAGGATCAACGTTCCTTGCGTGACAGTGAGATGTCGGAGAATTCTGAGGTTGAGGTTTGTTTGCGGTCGTTGCCTACAGTTTTGACCACTGCGCCGGGATGACAACGCCGCCGCCGCAGCTGTCGACGACGACGGCGGCTGTGATGGTGGCAACAAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAGCCCAACAGATAACGTGAGAAAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGATTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACATTATGGACGAAGACCGCTCCTTCCGTTGGCATGGTGTGGCCCACGGCGATACCATTGAGATCTTCAATGGCAGCATTTCTGGCGGATCTTAATTATCTCTGATACCACTTGTTGTGTGCCAAAAGCGGAACAAATGTACTCACAACACCAATGAACGGAATTACACAAAGAGACACTAAAATATTTGCATGGTTCGGAGAGAAGAAGTTCCTACATCCACGGGTAGCAACCAATCACTCCTAAAACCAAGCCTTCCAAGTGAATACCTCACTATCACACTATATAGACTCTCACCAATATGTCACTCAAGAAATACAGAAATACAATGTGACACACAAAACATTCCCAGATCCCGATATCAAATTCCGATATGACTAAATCTAATCCAAATAACCAAATCAAATCAAATCATAACTTATGACAATTTACAATAACAAGGTACTTCAAATTCATTTTCGTTTGGGTCCTTAACCAATCACCAATGAAAGCCTGACGCCGTCCTCAAGAATTGAGAATAGCGTAATAAAGTTACATATAGGCTTATCCTTGTAGCTATTACTTGTGCATTATTTAATACGGTGAAATGAACAGCATGTTTTGTCTTTCAATTGCTTTACGTTGATACTCAATTCATTTTAATCTTGGTTTAATTTTATTGCGTGGTAGATATGCTTTAATGCTTTTGATCTTAATGCTTTTGATCAAGCTATAGACCTCGATGTTTTGGATCATCTTGTTCTAAATTTTATATACTACCTTGTAAATTCAGTTTTACCTATGATATTTCGCTTGTGGTTGTTTGTTTTACTGGAATCTTTTAGTCAATTGGGGTATTCTAATCAATATGATGAGTTTCCTGCAACTGAGTATTAGTGTTCTATGATGATGAATTCATTCAGTTTGCGTATTGGTGTTCTATGATGATGATGAATTTAGTTCAGTCTCATTGTCATGTTTATGCTGATCGGGCCTTTAAAATTATAATCTTCCCCCAGATGGATGATGTGAGTTATTCTTCGAATGGAATATGTTTTTCCTTAGTATTGTCTACTTCTTTTTGCTCGAAAAAATGTGGAATGTCATTTTCTTTCAAAGGTACGAGTTCTTACTTGTGCTTCCATGTCTACAGTTGGTTGAGATTTTACCTTCTTCTCTAGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGAATTACGCAGTACCATCCTATCCGCTGAAAGAGTCGAGAAAGAAAAAGAAATTCTGATCAAGGTTTCAACTAGTTGCATGCAAAAGGAAGTGAAGAATTGGGAATGTAAAGGTACATGCTTTCTTTCTTATTACTTGGTATACTTTGGGGTATTTTAAATAATTATGCAGGAACAGCTTTGTGTAGATCGAACACGAGTTGTTGTTGTTTATTTATCTTTGAGCAATATACTTAAAACTTGGTTTCTTATGTGCTCTCATATTTAACTCATAGTGACTTATCGATACAAAATTTTGTACTTCAATTATGTTTTTGTTTAGCATTTTAGGTGAAATGGCTTAACAAGCTATCAACAAAATGTGGTCATTTGTTGCAGTTGTAAGTTTCTATGCCATGTTTGCTAACAACCCGGAAAAATAAAATAAACTAATAATAATAATAATAATAAATAAATAAATAAATAAATAAATAATAAAAATATTTATAAAAAAAAAAAAAACAACAACATTTCCCCACCTCTCTCCACTAACCTCTCATCCCTTCCCACAATTATCTCTCCTCAACCCATTCTTATAAAAAAAAAAGAAACAATAATGATCAGATTTACTTGAAGATAGATCTGATGTATATATTAAATCTTTATTTTTTTTTTATCTTATTTTTCTTAGAAATCACAACCAATTAGAGTAAGATCTTCATTCAATTATTACAATGGTCTACCTTTGAGTTAGAAACTAAATGTCCATCATTTATAGGATTCTAGTAAATCACTTCAGATTAGTAATATTATATTAATTTTTTATCAGTAGCCAAATGAATAGGTTAAAGATAGAATGGCAAGAAAACTTCTGAATAGGAAACACTAAGATAAGGAAAGATTTGGAAATAGAGATCCACTATAAATTTGAATTTGAAATAGATGAGAACAGAATTAAAAGGCAAAGGATAAATATAGAGTAGTAAAACACAGAATAACTTGAAATAGCTGTATCTACTCTCTTATACCAAGTAACCATGAAAAATAAGATTTTTAATAAAAATATAATTATAGATATATAACATTTCAAGACTTTTAACAATGGACCAATGTAAATTAGAGAAATAATGTTGTAGAGTTCAAACCTGAAACTAATGTCATGGGCTCATATAGGTTGACTCAGTTTTCAAAGAACGGAATCAAACTTTCATTAAAGATATATTCGTGACAACGACTTAAGCTAGCCAGGTAAGTGACCTTACTATCGGCATGGTTATATTTGATGTTGACACGTGGCCTGTGGTTCTGCACGTGTCATATATATTGATATGTGTGAATTGTCTGTGGATCGATATGCTTCCTATATGTTATGTATACGTTATAATATGTGAATTGTATGATAATAATTACGGTACGATGTGTTCAAGGATATGTTTGAGATATGATACAAGAATGATGCACAAAACGAAATGTAACGATAGGAATAAAATACATTCATGAAACGTTAATGTTAGGTTACATACCGGAGTGATATGGATAAGAGACATTGATGGAAGAATACGGTTAGGTTACACGTCCAAAATTACCCGTTAGGACAGCACGGTAGGGAAAATGGAATGAAAGATAGGTCTCATCATCTCATTGCATGTGATTGTTGCATTTAACCCCAATAGTGGAGTCACTTACTGAGTATTTCTCTAAATACTCAAGCCCTGTGCTATTACATTTTTTAGGTTAAGGCAAGGCATTTATGTACGGCTAACGACGGCATCGCAACTCGAGACCATGGCAGATGCATAGGATAGTGGTATTTATTTTCTTAGACTTAGGGTAGAATAGAATGTTTTTAACTTAAACTCTTATTAGTTTTATTTTATCTTTTGTTGTGTCGTTTTAAAGATGTTTTCGAAACATGTTAGTCCATGGGTGTGTTTTAAGATAAAGGTTATGTTTTATGGAATTTTAATGAAGTCTTCCGCATTCAATGTTTATGCTATGTATACAGTAGCAACCTTAAATTAACTAGAAAATTTCGAGTCATTAAAGATCGTTATGCTTTACATAGCGCTGCCATGACGGTTACCAGTTCTAGTGGGTGTCCAGCCTAAGGGGCTCCCAGAGTATGCTCACCGGATAAGAAAGGTGGCCCAGCGGTGTGCAAACTAGCTGGTGAGCCCATACTCGCACGTATGGACTGTGTGTAAAGTATATGGTACACATCCAAAATTACCCATTAGGACAGAACCGTAGGGAAAACGAACTGAAAAATAGGTTCTATCATCTCATTGCATGTGATTGTTGCATTTAACCACAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGTATTCTTGTACGGCGAACGAGGGCATCGCAACTCGAGACCATGACACATGCATAGGATAGTGGTATTTATTTTCTTAGACCTAGGGGAGAATAGAATGTTTTTAACTTAAACTCACTCTTATTCATCTTATTTAGTCTTTTGTAGTGTCGTTTTAAAGATGTTTTCGAAACA

mRNA sequence

ATGAAAAGTAAAAAGAAGAACAGAAGTTCATGCTTAGAGAAAAGGAGAGAACTCAACCTGATTCGAAGCCTAAGCCAATTGAAAAAGAAAATGATGAAAACGGAGAATAGTGAAGGAGAAGAAGAAGAACGTCCAAACCTGAAGAAAAGTGATTGGAAAAATCACTCTCGCATTCAACTCCTCGTAGCTTCCGAATACCAAAACAATTTCCAATCCCAATCGCAACCCCAAATCGACCCGAACCATTCAATCGAGCGCCTCAAACAGAGGATCCACGAAATCAACTTTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGCCTCCCTTGCCGACTTACAGGATCAACGTTCCTTGCGTGACAGTGAGATGTCGGAGAATTCTGAGGTTGAGGTTTGTTTGCGTTTTGACCACTGCGCCGGGATGACAACGCCGCCGCCGCAGCTGTCGACGACGACGGCGGCTGTGATGGTGGCAACAAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAGCCCAACAGATAACGTGAGAAAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGATTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACATTATGGACGAAGACCGCTCCTTCCGTTGGCATGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGAATTACGCAGTACCATCCTATCCGCTGAAAGAGTCGAGAAAGAAAAAGAAATTCTGATCAAGGTTTCAACTAGTTGCATGCAAAAGGAAGTGAAGAATTGGGAATGTAAAGTCTTCCGCATTCAATGTTTATGCTATGTATACAGTAGCAACCTTAAATTAACTAGAAAATTTCGAGTCATTAAAGATCGTTATGCTTTACATAGCGCTGCCATGACGTGTCGTTTTAAAGATGTTTTCGAAACA

Coding sequence (CDS)

ATGAAAAGTAAAAAGAAGAACAGAAGTTCATGCTTAGAGAAAAGGAGAGAACTCAACCTGATTCGAAGCCTAAGCCAATTGAAAAAGAAAATGATGAAAACGGAGAATAGTGAAGGAGAAGAAGAAGAACGTCCAAACCTGAAGAAAAGTGATTGGAAAAATCACTCTCGCATTCAACTCCTCGTAGCTTCCGAATACCAAAACAATTTCCAATCCCAATCGCAACCCCAAATCGACCCGAACCATTCAATCGAGCGCCTCAAACAGAGGATCCACGAAATCAACTTTGTGGGCCCCATCAACGGGATCATGCTCCAACCCAACGCCTCCCTTGCCGACTTACAGGATCAACGTTCCTTGCGTGACAGTGAGATGTCGGAGAATTCTGAGGTTGAGGTTTGTTTGCGTTTTGACCACTGCGCCGGGATGACAACGCCGCCGCCGCAGCTGTCGACGACGACGGCGGCTGTGATGGTGGCAACAAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAGCCCAACAGATAACGTGAGAAAATTGAAGAAAGAGCTGCAAAAGCTACAGCAGAGATTGCATTTTCATCTGCCACCAGAGGGTTTCTTTTTCATTTATGACCGCGACATTATGGACGAAGACCGCTCCTTCCGTTGGCATGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGAATTACGCAGTACCATCCTATCCGCTGAAAGAGTCGAGAAAGAAAAAGAAATTCTGATCAAGGTTTCAACTAGTTGCATGCAAAAGGAAGTGAAGAATTGGGAATGTAAAGTCTTCCGCATTCAATGTTTATGCTATGTATACAGTAGCAACCTTAAATTAACTAGAAAATTTCGAGTCATTAAAGATCGTTATGCTTTACATAGCGCTGCCATGACGTGTCGTTTTAAAGATGTTTTCGAAACA

Protein sequence

MKSKKKNRSSCLEKRRELNLIRSLSQLKKKMMKTENSEGEEEERPNLKKSDWKNHSRIQLLVASEYQNNFQSQSQPQIDPNHSIERLKQRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPPQLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHFHLPPEGFFFIYDRDIMDEDRSFRWHVLFILRKLPPKRELRSTILSAERVEKEKEILIKVSTSCMQKEVKNWECKVFRIQCLCYVYSSNLKLTRKFRVIKDRYALHSAAMTCRFKDVFET

Homology

[Close]

BLAST of Cp4.1LG00g02420 vs. TrEMBL
Match: V4U8Q0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.6e-30
Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 55  HSRIQLLVASEYQNNFQS-QSQPQ-------------------------IDPNHSIERLK 114
           +SRIQLLVAS+ +   ++ QS P                          +D N ++ RLK
Sbjct: 64  NSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLK 123

Query: 115 QRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPP 174
           ++IHE+  + P+N +++Q  +S A+LQD RSLRD E+ +N+E++V +R         P P
Sbjct: 124 EKIHEMESI-PVNRLLVQ--SSGAELQDHRSLRDCELMDNAEIDVHVR---------PSP 183

Query: 175 QLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHF 234
             ++TT+      SG    KLK++V  + GN +IP+EV+ +DNV +L+KELQKL QR HF
Sbjct: 184 TATSTTS------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHF 243

[Close]

BLAST of Cp4.1LG00g02420 vs. TrEMBL
Match: A0A067G7E3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.4e-30
Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 55  HSRIQLLVASEYQNNFQS-QSQPQ-------------------------IDPNHSIERLK 114
           +SRIQLLVAS+ +   ++ QS P                          +D N ++ RLK
Sbjct: 64  NSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLK 123

Query: 115 QRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPP 174
           ++IHE+  + P+N +++Q  +S A+LQD RSLRD E+ +N+E++V +R         P P
Sbjct: 124 EKIHEMESI-PVNRLLVQ--SSGAELQDHRSLRDCELMDNAEIDVHVR---------PSP 183

Query: 175 QLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHF 234
             ++TT+      SG    KLK++V  + GN +IP+EV+ +DNV +L+KELQKL QR HF
Sbjct: 184 TATSTTS------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHF 243

[Close]

BLAST of Cp4.1LG00g02420 vs. TrEMBL
Match: M5WRM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022934mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 74/157 (47.13%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 77  QIDPNHSIERLKQRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLR 136
           ++D N ++ +LK++I  ++   PI  ++L    +  +LQD RSLRD E+S+N+E+EV LR
Sbjct: 115 EMDINDTVTKLKEKIQAMDQAVPIGRLVLHSLGN--ELQDHRSLRDCELSDNAEIEVSLR 174

Query: 137 FDHCAGMTTPPPQLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLK 196
               A      P       A  VA S   +NKLK+MV PK G  KIP+E++P+DNV +L+
Sbjct: 175 PSPTAAAAVASPLAMGGPGAGGVAVS---RNKLKLMVLPKCGTKKIPVEMNPSDNVGELR 234

Query: 197 KELQKLQQRLHFHLPPEGFFFIYDRDIMDEDRSFRWH 234
           KELQKL  RLHFHLP E +FFIY +++M++DRSFRWH
Sbjct: 235 KELQKLHHRLHFHLPQESYFFIYKQNVMEDDRSFRWH 266

[Close]

BLAST of Cp4.1LG00g02420 vs. TrEMBL
Match: A0A061GGR6_THECC (Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.5e-29
Identity = 79/157 (50.32%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 77  QIDPNHSIERLKQRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLR 136
           ++D N ++ RLK++I E+  V P+N +++Q  +S A+LQD  SLRD E+ +N+E++V ++
Sbjct: 108 EMDVNDTVLRLKEKIREMEPV-PVNRLVVQ--SSGAELQDHLSLRDCELPDNTEIDVNIK 167

Query: 137 FDHCAGMTTPPPQLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLK 196
                    P P  S T +A   AT+G+ K  LKVMV PK G  KIP+EV+ +DNV +L+
Sbjct: 168 ---------PSPTGSGTGSAG--ATTGT-KRLLKVMVLPKCGTKKIPVEVNASDNVAELR 227

Query: 197 KELQKLQQRLHFHLPPEGFFFIYDRDIMDEDRSFRWH 234
           KELQKLQQRL FHLP EG+FFIY +++MD+DRSFRWH
Sbjct: 228 KELQKLQQRLQFHLPQEGYFFIYKQNVMDDDRSFRWH 249

[Close]

BLAST of Cp4.1LG00g02420 vs. TrEMBL
Match: A5AW52_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033883 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 72/157 (45.86%), Postives = 103/157 (65.61%), Query Frame = 1


Query: 77  QIDPNHSIERLKQRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLR 136
           ++D  H++ RLK++IHE+  + P+N ++L       +LQD RSLRD E+S+ SE++V ++
Sbjct: 132 EMDLAHTVGRLKEKIHEMEXI-PVNRMVLYWRGR--ELQDSRSLRDCELSDRSEIDVGIK 191

Query: 137 FDHCAGMTTPPPQLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLK 196
                    P P           A SGS   +LK+MV  K G  K+P+EV+P DNV +L+
Sbjct: 192 ---------PLP-----------AASGSGSKRLKLMVMSKCGTKKVPVEVNPLDNVGELR 251

Query: 197 KELQKLQQRLHFHLPPEGFFFIYDRDIMDEDRSFRWH 234
           KEL+KL QR  FHLPPEG+FFIY +++MD+DRSFRWH
Sbjct: 252 KELEKLDQRFQFHLPPEGYFFIYKQNVMDDDRSFRWH 265

[Close]

BLAST of Cp4.1LG00g02420 vs. TAIR10
Match: AT4G05230.1 (AT4G05230.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-18
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 155 AAVMVATSGSSKN----KLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHFHL 214
           + VM+  S ++ N    KL+VMV PK G  KIP++V+  DNV +L+KEL K+QQR    L
Sbjct: 105 STVMIPMSNNNNNNNPKKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSL 164

Query: 215 PPEGFFFIYDRDIMDEDRSFRWH 234
           P EG+FFIY +++MDE+RSFRWH
Sbjct: 165 PQEGYFFIYKQNVMDENRSFRWH 187

[Close]

BLAST of Cp4.1LG00g02420 vs. TAIR10
Match: AT4G03370.1 (AT4G03370.1 Ubiquitin family protein)

HSP 1 Score: 62.0 bits (149), Expect = 7.9e-10
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1


Query: 168 KLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHFHLPPEGFFFIYDRDIMDED 227
           K+ VMVQP     +I +EV+   NV  L+KEL K+Q+R   +LP EGFFFI+ +D++ ED
Sbjct: 199 KITVMVQPFEETRRIQVEVNVLSNVEVLRKELVKMQERGELNLPHEGFFFIHKQDVLRED 258

Query: 228 RSF 231
           +SF
Sbjct: 259 QSF 261

[Close]

BLAST of Cp4.1LG00g02420 vs. NCBI nr
Match: gi|567913557|ref|XP_006449092.1| (hypothetical protein CICLE_v10018056mg [Citrus clementina])

HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 55  HSRIQLLVASEYQNNFQS-QSQPQ-------------------------IDPNHSIERLK 114
           +SRIQLLVAS+ +   ++ QS P                          +D N ++ RLK
Sbjct: 64  NSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLK 123

Query: 115 QRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPP 174
           ++IHE+  + P+N +++Q  +S A+LQD RSLRD E+ +N+E++V +R         P P
Sbjct: 124 EKIHEMESI-PVNRLLVQ--SSGAELQDHRSLRDCELMDNAEIDVHVR---------PSP 183

Query: 175 QLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHF 234
             ++TT+      SG    KLK++V  + GN +IP+EV+ +DNV +L+KELQKL QR HF
Sbjct: 184 TATSTTS------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHF 243

[Close]

BLAST of Cp4.1LG00g02420 vs. NCBI nr
Match: gi|568827267|ref|XP_006467986.1| (PREDICTED: polyubiquitin 9 [Citrus sinensis])

HSP 1 Score: 140.6 bits (353), Expect = 4.9e-30
Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 55  HSRIQLLVASEYQNNFQS-QSQPQ-------------------------IDPNHSIERLK 114
           +SRIQLLVAS+ +   ++ QS P                          +D N ++ RLK
Sbjct: 64  NSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVLRLK 123

Query: 115 QRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPP 174
           ++IHE+  + P+N +++Q  +S A+LQD RSLRD E+ +N+E++V +R         P P
Sbjct: 124 EKIHEMESI-PVNRLLVQ--SSGAELQDHRSLRDCELMDNAEIDVHVR---------PSP 183

Query: 175 QLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHF 234
             ++TT+      SG    KLK++V  + GN +IP+EV+ +DNV +L+KELQKL QR HF
Sbjct: 184 TATSTTS------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRKELQKLHQRYHF 243

[Close]

BLAST of Cp4.1LG00g02420 vs. NCBI nr
Match: gi|595914316|ref|XP_007214682.1| (hypothetical protein PRUPE_ppa022934mg [Prunus persica])

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 74/157 (47.13%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 77  QIDPNHSIERLKQRIHEINFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLR 136
           ++D N ++ +LK++I  ++   PI  ++L    +  +LQD RSLRD E+S+N+E+EV LR
Sbjct: 115 EMDINDTVTKLKEKIQAMDQAVPIGRLVLHSLGN--ELQDHRSLRDCELSDNAEIEVSLR 174

Query: 137 FDHCAGMTTPPPQLSTTTAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLK 196
               A      P       A  VA S   +NKLK+MV PK G  KIP+E++P+DNV +L+
Sbjct: 175 PSPTAAAAVASPLAMGGPGAGGVAVS---RNKLKLMVLPKCGTKKIPVEMNPSDNVGELR 234

Query: 197 KELQKLQQRLHFHLPPEGFFFIYDRDIMDEDRSFRWH 234
           KELQKL  RLHFHLP E +FFIY +++M++DRSFRWH
Sbjct: 235 KELQKLHHRLHFHLPQESYFFIYKQNVMEDDRSFRWH 266

[Close]

BLAST of Cp4.1LG00g02420 vs. NCBI nr
Match: gi|645236530|ref|XP_008224781.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Prunus mume])

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29
Identity = 84/200 (42.00%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 41  EEERP-------NLKKSDWKNHSRIQLLVASEYQNNFQSQSQPQIDPNHSIERLKQRIHE 100
           E E+P       N+K  D    ++IQL V        +     ++D N ++ +LK++I  
Sbjct: 74  ESEKPTTTNNNNNVKVEDSSPSNKIQLNVKIPTS---KMHVPVEMDINDTVTKLKEKIQA 133

Query: 101 INFVGPINGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPPQLSTT 160
           ++   P+  ++L    +  +LQD RSLRD E+S+N+E+EV LR    A      P     
Sbjct: 134 MDQAVPVGRLVLHSLGN--ELQDHRSLRDYELSDNAEIEVSLRPSPTAVAAVASPVAMGG 193

Query: 161 TAAVMVATSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHFHLPPE 220
           T    VA S   +NKLK+MV PK G  KIP+E++P+DNV +L+KELQKL QRLHFHLP E
Sbjct: 194 TGGAGVAVS---RNKLKLMVLPKCGTKKIPVEMNPSDNVGELRKELQKLHQRLHFHLPQE 253

Query: 221 GFFFIYDRDIMDEDRSFRWH 234
            +FFIY +++M++DRSFRWH
Sbjct: 254 SYFFIYKQNVMEDDRSFRWH 265

[Close]

BLAST of Cp4.1LG00g02420 vs. NCBI nr
Match: gi|802779511|ref|XP_012091408.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas])

HSP 1 Score: 137.1 bits (344), Expect = 5.5e-29
Identity = 81/193 (41.97%), Postives = 121/193 (62.69%), Query Frame = 1


Query: 41  EEERPNLKKSDWKNHSRIQLLVASEYQNNFQSQSQPQIDPNHSIERLKQRIHEINFVGPI 100
           + ++P +K  +     +IQL +      + +     ++D N ++ RLK++I E+  V PI
Sbjct: 74  DNDKPQIKVEESSPSKKIQLSIKIP---SSKLHVPLEMDLNDTVLRLKEKIQEMESV-PI 133

Query: 101 NGIMLQPNASLADLQDQRSLRDSEMSENSEVEVCLRFDHCAGMTTPPPQLSTTTAAVMVA 160
           + ++LQ N    +LQD RSL + E+ ENSE+ V +R         P P  S T +    A
Sbjct: 134 HRLILQSNGG--ELQDNRSLHECELMENSEINVNIR---------PSPTCSGTGSTGAAA 193

Query: 161 TSGSSKNKLKVMVQPKFGNSKIPMEVSPTDNVRKLKKELQKLQQRLHFHLPPEGFFFIYD 220
           T+  +KNKLK+MV  K G  KIP+E++ +DNV +L+KELQKL Q+L FHLP EG+FFIY 
Sbjct: 194 TTTGTKNKLKLMVLTKCGTKKIPVEMNASDNVGELRKELQKLHQKLQFHLPQEGYFFIYK 251

Query: 221 RDIMDEDRSFRWH 234
           +++MDED+SFRWH
Sbjct: 254 QNVMDEDQSFRWH 251

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g02420 vs. TrEMBL


Match Name	E-value	Identity	Description
V4U8Q0_9ROSI	2.6e-30	41.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1	[more]
A0A067G7E3_CITSI	3.4e-30	41.46	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1	[more]
M5WRM5_PRUPE	1.7e-29	47.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022934mg PE=4 SV=1	[more]
A0A061GGR6_THECC	6.5e-29	50.32	Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1	[more]
A5AW52_VITVI	1.4e-28	45.86	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033883 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g02420 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05230.1	2.7e-18	53.01	Ubiquitin-like superfamily protein	[more]
AT4G03370.1	7.9e-10	49.21	Ubiquitin family protein	[more]

BLAST of Cp4.1LG00g02420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|567913557\|ref\|XP_006449092.1\|	3.8e-30	41.46	hypothetical protein CICLE_v10018056mg [Citrus clementina]	[more]
gi\|568827267\|ref\|XP_006467986.1\|	4.9e-30	41.46	PREDICTED: polyubiquitin 9 [Citrus sinensis]	[more]
gi\|595914316\|ref\|XP_007214682.1\|	2.4e-29	47.13	hypothetical protein PRUPE_ppa022934mg [Prunus persica]	[more]
gi\|645236530\|ref\|XP_008224781.1\|	4.2e-29	42.00	PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Prunus mume]	[more]
gi\|802779511\|ref\|XP_012091408.1\|	5.5e-29	41.97	PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02420.1	Cp4.1LG00g02420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 24..44 scor
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 161..233 score: 2.
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 46..138 score: 2.2E-25coord: 168..233 score: 2.2
None	No IPR available	PANTHER	PTHR10666:SF159	SUBFAMILY NOT NAMED	coord: 168..233 score: 2.2E-25coord: 46..138 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g02420	Cucurbita maxima (Rimu)	cmacpeB025