Cp4.1LG00g00390 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAGTAGGTTTTAAATATGCATATTTTACCTCCATTTGCTTCATTTTCTGGTTATATTCGTAGAACTTCGACCTTTTTCTGGATATATTTCTAGTTATNCGTCACTAATTAGGTTAAAGAAAATTAGGGGCGTTACATATGTCTTGCACTATTCGACCATGGAATAGTGTAGGAATAGGAAGCTTGTTGGGTGCCATGAGGGGAGCTTCTGACTAGTGCTTAATAGTAGGCACATATGGAGATATAAGCAGATTAAGAGGCCACCTATAGTGAGCGGTGACTCCTCCATGCCTGTTAGACTTCCCTAGAGCCCGAGACATAGAAGAGCACTCTGACTTATGCACAGGAAGCATAATTGCCTATTGGACCTTGAAAAGTAGGAAATGAGAGGCTAAGTGCACCTTAAAATCAAAATACACCTCGATGGGTGAGTTGCATCCTTGGAATAAGAGTAAGTACGGTATATGACCTTAAGAGCCAGAGAGAATTTGAAATGAACTCAAGCCATGAAATTGGTTGGAATTTAAGAAATATTAAAGAGAAGAAGTTTTGATGGTATCCTACCCGTTAAGTATCAATTCTGTAATGAACAATTTATTAATAATCCAACCATAAATTAAGTGCCTTCGAACTAGTAAGAGGATAAAAGTTCATTATTCAAGTCTCAAAATTAGGCGCGGAAGAAATGGCACTTAAGCATGAAATTGAGAGTAATTAAAGGCAGTAATAGTGTTATTATTTGGGTAAGTATGAAATCGTAATCATTGACGTTTAAAATGGGGTCACCCAATATAATAATGTTAAAATAATAGTAATAATAATAATAAAATAATATGTTTTTGGGGGTTGGAGAAAGGTGTTGAGATTTCTGAGTGGGGCCACCACAGTGATAGCGATGTGTTTGTATAAAAACATTTATTGTCCCAATCTTCATTTTTGTATAGGAAACAAATAAAATATATACATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTGCCATATATGAGAACTTAACAAAATTAGGCAATCAGCTTAATGTCCTTTACTAATCACTATATTTCCTTCAAAAATTTAATTTCCCCATTTAACCAAAATTTAGATGTGAATTTACTTTTTATGGAGGAAAATAGGTTAATTTATTAAATAAATAAATAATCTCCAAAATCTCAATAATATATTATATATATATATATATATATTTTTTTTTTTTAATACTGAAAATATTTTATTTTTTAATTTTTAAAAACTTTAAACTTTTTTTTTTCTTAAATATTCTTTTAATCTCTTTCGTTCTTGATTTTTAAAATTTTAGTATTTCCAAAATAAATATAAGAAATTTTAACATCTATATAATCAATTTCTTTAAATTAAATTAACTCTGAAAATAGAGAAATAATTTATGAATGAGTTTGGTCAGACAATAATTTTTAATTTTTTTTTTTTAAATTTAGAGATATAAAAGTTTTTTGAAACGAGTAATTTTAGTTTTATTATATATATTTGAAATGATATTAATTAATTTGAAAAGTAATTTTGAAATAAAATTAATTAATTTTTGGAAGTTCAAAAGTTGTAGCGTAGCTTGGCGGAGGCACTGAAGGTGGTGGCTTAGACGAAAGAGCCAAGGAGGGGCGCAATACGCACAAAAAGCGAAAGGGTTTGAACTTTGAATTTTCATTTTGTCCATTTCCGAAACGCACACATCTTACACCTAATCTCCTCTCTCCCTCCCTCTCTCTCTTCGTTCCATGTGATCCAAAGGGCAAAAGCTTCGGCTGGATGTCCATGGATTTGTTCTCTCTTAACACCAGCTGACGTTGTTTGCGTTGGTCGAGAGCAATTTCCATGGCCAAATTGCAGTTGCAAGCTCCACTTTTCGTCTGAGAGAAATCCTAGCTGCAGACGGGGATTTAGGGTTTTGTTTTAAGGAAAATCGCATCGTTTTCAAGAATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAGTAG ATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAAATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAGTAG ATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAAATGCCGACGCACGGATCCAAATCCGAAAAGCAAGATGCCGCGGTGATGAACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCCAGAAACTCCACGGATCAGGAAATCAAAAGCGCTTACAGAAGAATGGCTCTCAAGTAG MPTHGSKSEKQDAAVMNRRDPYEVLGVSRNSTDQEIKSAYRRMALKMPTHGSKSEKQDAAVMNRRDPYEVLGVSRNSTDQEIKSAYRRMALK
BLAST of Cp4.1LG00g00390 vs. Swiss-Prot
Match: DNJ16_ARATH (Chaperone protein dnaJ 16 OS=Arabidopsis thaliana GN=ATJ16 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.8e-12 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. Swiss-Prot
Match: DNJ39_ARATH (Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09 Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein DnaJ OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein DnaJ OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein DnaJ OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TrEMBL
Match: A0A0A0KRV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G467910 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-14 Identity = 41/46 (89.13%), Postives = 45/46 (97.83%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TrEMBL
Match: A0A059D846_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03370 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 5.9e-12 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TrEMBL
Match: W9S1Y2_9ROSA (Chaperone protein dnaJ 16 OS=Morus notabilis GN=L484_027835 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.9e-11 Identity = 39/46 (84.78%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TrEMBL
Match: V4K9N1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007684mg PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.5e-11 Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TrEMBL
Match: A0A087HQS3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G261200 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.5e-11 Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TAIR10
Match: AT1G24120.1 (AT1G24120.1 ARG1-like 1) HSP 1 Score: 72.0 bits (175), Expect = 2.1e-13 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TAIR10
Match: AT1G59980.1 (AT1G59980.1 ARG1-like 2) HSP 1 Score: 63.9 bits (154), Expect = 5.8e-11 Identity = 40/82 (48.78%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. TAIR10
Match: AT1G68370.1 (AT1G68370.1 Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 3.0e-07 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. NCBI nr
Match: gi|449452046|ref|XP_004143771.1| (PREDICTED: chaperone protein dnaJ 16 isoform X1 [Cucumis sativus]) HSP 1 Score: 86.3 bits (212), Expect = 3.1e-14 Identity = 41/46 (89.13%), Postives = 45/46 (97.83%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. NCBI nr
Match: gi|778702900|ref|XP_011655277.1| (PREDICTED: chaperone protein dnaJ 16 isoform X2 [Cucumis sativus]) HSP 1 Score: 86.3 bits (212), Expect = 3.1e-14 Identity = 41/46 (89.13%), Postives = 45/46 (97.83%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. NCBI nr
Match: gi|659131600|ref|XP_008465767.1| (PREDICTED: chaperone protein dnaJ 16 isoform X1 [Cucumis melo]) HSP 1 Score: 85.1 bits (209), Expect = 6.9e-14 Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. NCBI nr
Match: gi|659131604|ref|XP_008465769.1| (PREDICTED: chaperone protein dnaJ 16 isoform X2 [Cucumis melo]) HSP 1 Score: 85.1 bits (209), Expect = 6.9e-14 Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 1
BLAST of Cp4.1LG00g00390 vs. NCBI nr
Match: gi|702277334|ref|XP_010044663.1| (PREDICTED: chaperone protein dnaJ 16 [Eucalyptus grandis]) HSP 1 Score: 78.2 bits (191), Expect = 8.5e-12 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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