Cp4.1LG00g00310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g00310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG00 : 592487 .. 594811 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAAGGTATTATTATGCTACTATAGAAATAACATGATTAAGACATTGAATCGTGAATTAAGAACTTCATTGATGAATTTAGTTTGATTATCTGTAATTGGTTGTTGTGGTGTGACTATCGAACTTTGATGAATAGATTGACGTAGACTGGTGTTGTGATTTATGTCATAAAACCTCTTAATTAACTATTTTATTTATAATAATAATAATTTTGATTATTTTATTTATAATTTAATATTATTGATTATATTGGTTAACACAGAGAATGATCATGTTCAAGTAATATCTTAAACGATCTATAACATATGTATAAGGTTGAATGTCTTATTCTAATAACTAACATATGTATAAGGTTGAGTGTCTTATTCTAATAACACTGTTGATACAAAGCCATTGTATAATTGTTATAAATGATTTGATTCAAATCATTTATGTAAAGATATGTGAATGTGAGTATCTTATATAATGAGTTTGTATAAGACTGGACCACAAAACATTTAATCTCTACTTATAAATTCGTTAATTAAGAAGATCAATATTTCACATGATGAACATATACAACTCGACCTTAATACTTAATACTGAGTACATTATTAACTCGTGCCTAGAGAGAATGACTTTTGTAACTAATTTAATATACCTATATTTTGGAGACTTGACCAAATAGGGAGCTGAGAACATAATATCACGAGATGGAATTCCCTTCTTTCCATTTAGAAAAAGTAGATTAATTGTTCTCTTAGGTGCTGAATTCGGTACTTGAACAATGGGGTCCTGCCCTCTCATTGGCCCAAGAGTGATTGTGAAATGATATGACTACGATATGTTATGAAATAATATGACTATGAAATGTCGGTGATATGTTATGACATATGTTATGATGTGACGTGTTGATGATACAATATATGTTATGTTGTAACACGTTTGGCAATACAAAACATGTCGTGACGTGTTTTATGATATGATATGTCGAAGGATATGTTATGTGCATGATATGACATAAGACCATATATGTTATGAATCATACGAGATTCAACTCTAATACATGCCTTAAAGGCTATGTTGAAAAATGATATGATTTGAAGGAAAATAAAAGGGGTTGTTTTACATGATAATGAATGAAAATGTTGATCTCATACATCATTAAATATCCCCTTGTTATGATTGTACGGACGCGTATGTTACAAGACAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCGTATGTGTGGGTCGTGTATAGAACAGTATCTAAATAGTGGGGTCATTTATGAGTATTTCTTAAGATACTCAAGTCACGTGGTACTTCTCAGATGCATAAGATAGTTGTATTTATTTATTTTTAGTTTTATATAAATATAAAATTTGAGAGAGAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGGTTCCTTCTTCAACACCCAATCATTTTTCTTTTTCTTTTTTTCTTTTTTCATTTTTCAAATTAATTAATCAATTTTATTTTTATAAATTCAAATTATTAAAAATTATCCAAATTAATTTTATATATTTTCAAATTTTATTTAATTTTATTTTCCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

mRNA sequence

ATGAATAAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

Coding sequence (CDS)

ATGAATAAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

Protein sequence

MNKENEHYVATIVIPNKCPTSIVPENARTTKNEDQEVHKPTCGPILRERFWCDILNVKISPERPPISFIFYILHLLPLSDPNISVSIQLNSNTMDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVVRVK
Homology
[Close]
BLAST of Cp4.1LG00g00310 vs. TrEMBL
Match: A0A0A0KRW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468990 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.4e-26
Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 1 

Query: 135 DGEPSDDEPSDDEPSSPATSDLQSRAVG-EAIMRGWEIVKAKVISGIVGFGSHARRLCSA 194
           + + +  E    E S+P +SD++ RAV  EAIMRG E+VKAKV+SGIVGFG +  RL S 
Sbjct: 29  ENQIASSESESSESSTPESSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSI 88

Query: 195 LPVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISEL 254
              TAMA  L +LL L      +K+K+ LPWRP    V  D +  L+LLLKHKD+KI+EL
Sbjct: 89  FGATAMAGLLIVLLFL------LKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINEL 148

Query: 255 LLQIAQMNEMLSARRKVPVVRVK 277
           L+QIAQMNE LSARRKVPVVR+K
Sbjct: 149 LVQIAQMNETLSARRKVPVVRIK 165

[Close]
BLAST of Cp4.1LG00g00310 vs. TrEMBL
Match: A0A067L9U4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15652 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-08
Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 1 

Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPA-HAHSDDEPSDGEPSDDEPSDDEPSSPA 153
           M+G +A     +   ++ +  +     VFPP+ H      P    P    P D +P    
Sbjct: 1   MEGGEATESLNDWEQVQPEIILQDDLSVFPPSYHEGLQISPPQPPPLPPSPPDSQPPIQP 60

Query: 154 TSDLQSRAVGEAIMRGWEIVKAKV---------------ISGIVGFGSHARRLCSALPVT 213
           +S +   A GE +       KAKV                SGIV   S AR       + 
Sbjct: 61  SSVVVCSAEGEEVFSPSPDSKAKVGNEIGKCLRWRFEILRSGIVWIASRARGGSGFWSLA 120

Query: 214 AMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQI 273
           +++A     +LL+L     K++    W      V  ++++RL+ L+K KDQKIS+LLLQI
Sbjct: 121 SVSAVFATAVLLYL-----KLQKWRQW------VREESENRLIHLIKEKDQKISQLLLQI 180

Query: 274 AQMNEMLSARRKVPVVRV 276
           AQMNEMLSARRKVPVVRV
Sbjct: 181 AQMNEMLSARRKVPVVRV 187

[Close]
BLAST of Cp4.1LG00g00310 vs. TrEMBL
Match: W9S8E9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015703 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 1 

Query: 118 KSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPATSD-----------------LQSRA 177
           +SP  PP    +   PS    S    S   P S ++S                  + +R 
Sbjct: 56  RSPALPPPQEPNSPSPSSSSSSPTPESPPVPPSSSSSRNSKRDEEATRRRSDSRLVAARE 115

Query: 178 VGEAIMRGWEIVKAKVI---SGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFKIKIK 237
           +G+ +     I+ A+V+   S +  +   A R  S + V  +  A+ L LL       +K
Sbjct: 116 IGKRLRLRLGILSAEVLRAASKVCNYWMIAGRFWSVVSVVGVLTAMLLSLLY------VK 175

Query: 238 IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVVRV 276
           +K R  WR  T  +  D++ RL+LLLK KD+KIS+LL+QIA+MNE LSARR+VPV+RV
Sbjct: 176 LKPR--WR--TRRLLRDDKERLILLLKEKDEKISQLLVQIAEMNEALSARRRVPVLRV 223

[Close]
BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: gi|659131561|ref|XP_008465748.1| (PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo])

HSP 1 Score: 166.4 bits (420), Expect = 7.1e-38
Identity = 108/201 (53.73%), Postives = 132/201 (65.67%), Query Frame = 1 

Query: 94  MDGSQALTQP-----QNLLVIREDYFVHYKSPVFPPA------------HAHSDDEPSDG 153
           MDGS+    P     +N LVIR+DYFVH++SPVFPP             H  S DE    
Sbjct: 1   MDGSEGEEAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDESESS 60

Query: 154 EPSDDEPSDDEPSSPATSDLQSRAVG-EAIMRGWEIVKAKVISGIVGFGSHARRLCSALP 213
           E SD   S    S+P +SD++ RAV  EAIMRG E+VKAKV+SGIVGFG +  RL S   
Sbjct: 61  ESSDSSDS----STPESSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFG 120

Query: 214 VTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLL 273
            TAMA     LL++ LF +K+K+K+ LPWRP    V  D +  L+LLLKHKD+KI++LLL
Sbjct: 121 ATAMAG----LLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDEKINQLLL 180

Query: 274 QIAQMNEMLSARRKVPVVRVK 277
           QIAQMNE LSARRKVPVVR+K
Sbjct: 181 QIAQMNETLSARRKVPVVRIK 193

[Close]
BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: gi|700195980|gb|KGN51157.1| (hypothetical protein Csa_5G468990 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 1 

Query: 135 DGEPSDDEPSDDEPSSPATSDLQSRAVG-EAIMRGWEIVKAKVISGIVGFGSHARRLCSA 194
           + + +  E    E S+P +SD++ RAV  EAIMRG E+VKAKV+SGIVGFG +  RL S 
Sbjct: 29  ENQIASSESESSESSTPESSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSI 88

Query: 195 LPVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISEL 254
              TAMA  L +LL L      +K+K+ LPWRP    V  D +  L+LLLKHKD+KI+EL
Sbjct: 89  FGATAMAGLLIVLLFL------LKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINEL 148

Query: 255 LLQIAQMNEMLSARRKVPVVRVK 277
           L+QIAQMNE LSARRKVPVVR+K
Sbjct: 149 LVQIAQMNETLSARRKVPVVRIK 165

[Close]
BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: gi|802567322|ref|XP_012067706.1| (PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas])

HSP 1 Score: 67.8 bits (164), Expect = 3.4e-08
Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 1 

Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPA-HAHSDDEPSDGEPSDDEPSDDEPSSPA 153
           M+G +A     +   ++ +  +     VFPP+ H      P    P    P D +P    
Sbjct: 1   MEGGEATESLNDWEQVQPEIILQDDLSVFPPSYHEGLQISPPQPPPLPPSPPDSQPPIQP 60

Query: 154 TSDLQSRAVGEAIMRGWEIVKAKV---------------ISGIVGFGSHARRLCSALPVT 213
           +S +   A GE +       KAKV                SGIV   S AR       + 
Sbjct: 61  SSVVVCSAEGEEVFSPSPDSKAKVGNEIGKCLRWRFEILRSGIVWIASRARGGSGFWSLA 120

Query: 214 AMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQI 273
           +++A     +LL+L     K++    W      V  ++++RL+ L+K KDQKIS+LLLQI
Sbjct: 121 SVSAVFATAVLLYL-----KLQKWRQW------VREESENRLIHLIKEKDQKISQLLLQI 180

Query: 274 AQMNEMLSARRKVPVVRV 276
           AQMNEMLSARRKVPVVRV
Sbjct: 181 AQMNEMLSARRKVPVVRV 187

[Close]
BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: gi|703146139|ref|XP_010108714.1| (hypothetical protein L484_015703 [Morus notabilis])

HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07
Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 1 

Query: 118 KSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPATSD-----------------LQSRA 177
           +SP  PP    +   PS    S    S   P S ++S                  + +R 
Sbjct: 56  RSPALPPPQEPNSPSPSSSSSSPTPESPPVPPSSSSSRNSKRDEEATRRRSDSRLVAARE 115

Query: 178 VGEAIMRGWEIVKAKVI---SGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFKIKIK 237
           +G+ +     I+ A+V+   S +  +   A R  S + V  +  A+ L LL       +K
Sbjct: 116 IGKRLRLRLGILSAEVLRAASKVCNYWMIAGRFWSVVSVVGVLTAMLLSLLY------VK 175

Query: 238 IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVVRV 276
           +K R  WR  T  +  D++ RL+LLLK KD+KIS+LL+QIA+MNE LSARR+VPV+RV
Sbjct: 176 LKPR--WR--TRRLLRDDKERLILLLKEKDEKISQLLVQIAEMNEALSARRRVPVLRV 223

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g00310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g00310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRW8_CUCSA7.4e-2655.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468990 PE=4 SV=1[more]
A0A067L9U4_JATCU2.4e-0834.34Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15652 PE=4 SV=1[more]
W9S8E9_9ROSA2.0e-0734.27Uncharacterized protein OS=Morus notabilis GN=L484_015703 PE=4 SV=1[more]
BLAST of Cp4.1LG00g00310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131561|ref|XP_008465748.1|7.1e-3853.73PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo][more]
gi|700195980|gb|KGN51157.1|1.1e-2555.94hypothetical protein Csa_5G468990 [Cucumis sativus][more]
gi|802567322|ref|XP_012067706.1|3.4e-0834.34PREDICTED: uncharacterized protein LOC105630492 [Jatropha curcas][more]
gi|703146139|ref|XP_010108714.1|2.9e-0734.27hypothetical protein L484_015703 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g00310.1Cp4.1LG00g00310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37206FAMILY NOT NAMEDcoord: 195..275
score: 4.3
NoneNo IPR availablePANTHERPTHR37206:SF2SUBFAMILY NOT NAMEDcoord: 195..275
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g00310CmaCh05G008940Cucurbita maxima (Rimu)cmacpeB761
Cp4.1LG00g00310Cla005563Watermelon (97103) v1cpewmB001
Cp4.1LG00g00310Csa5G468990Cucumber (Chinese Long) v2cpecuB015
Cp4.1LG00g00310ClCG09G021960Watermelon (Charleston Gray)cpewcgB000
Cp4.1LG00g00310MELO3C002975.2Melon (DHL92) v3.6.1cpemedB003
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None