CmoCh20G011020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G011020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Terpene synthase
Location	Cmo_Chr20 : 10495624 .. 10498524 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTTGGTGGAGTAACACCCGATTTGGCAACAAGTTGAGGTTTCCAAGAGATAAATTAATAAAATGTTTCTTTTGGATGGGTGTTGCATTTGAACCTAATCTCTCATATCTTAAAAGAATGGGTACAAAAATCAATGCATTATTAACAATAATAGATGATGTTTATGATGTTTATGACACATTACATGAACTCGAGCTCTTTACGGATGCCATAGAGAGGTAAACTTTTTTTTTTTGTTCTTTTAGAAAATATATAAATACTTAACTCTCGTTTTAGGTGGAATGTTGATGTAGTGGACAAGCTTTCTAACGGTATGAAAATATGTTTTTTTTTGCTCTCCACAATTCTATAAATGAGGTGGCTTTTGAAATGTTGAGAGACAAAGGAATTAATGTGATCCAATACCTTAAGAAAACGGTATGAATTTAATTATTGATATAATTTGTTGGTCTTCCACAATTGTGCGACTTGCTAATGATCTAGCAATATCATCGGTATGTAAACCACGTCTTGCTATCTTCATTACAAGAAACCCCCCCTTTTTCTTATACAAATAGTCAAAATTTAAGTATTTGAGTAGGTAACTATCTTCGAGTTAATGAAATTCTATAAGTAATTAAATTTAACATTTTGAAACTTTCATCAACTAACAAGTTTTATTCAGGATGAATAAGAAAGAGGTGATATTCCGAAATCATTACAATGTTACATGAATGACACGGGAACCTCAGAGAGTAAAGCTCGTGAATATATAAAGCATTTGATTGATGAGACATGGAAGAAGTTAAATGAGGTTGAAGTTGAGAATTCTATCTTCCCTCAAGTGTTCATCGAGAGAGTTATGAATTTTGCTAGAATGGCTCAATACGTGTATCAATATGGAGATGGACATGACATAGGTCTCCAAAAAATAAAGGATAGTATAATGTCTCTACTTATTCGACCCATTTCCATTCATGAGCCGAGAATCTACAATGAGATTTAAGCTATGGTGAGCTCGTTAAATGAAGTTTTAGAAGACCTTGGAGTCCTTCCCTACATATTTTTCAATGTTGAGCTTTTTATTTCATTATTATCATTGTAATTTCAATTTTTGTTTATTATTTAAGCCAGTTTTAGTAGGAGAGCTAAGGTTATTTGTAACTCACGTACTTTATAATATTCTTAGCAATTTTAACATAGAGGTTACGAGTGTATTTATTATAAAGGTCAAGGATACAATTAAAAAATGAAATAGAAAATGCTCAAATACAAAAATGGACTAATACACAGGAATGACCCCTCTGTGACCAATCCACGAGCTTTTACTCTTAAGTCTAGTAAGTATATAACTCTTTGCGTTCGTAGACTGGGCTAGCTAGCTTAGCCTATGAGTTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAACTAAATTCAATATACACTCAAAGTTATGTTCTTTCATGAAAAACATCTATATAAATAGCTTTACAAAGCAACCGAAAACGGAAAATTAACTAATAAATAATAACCACTAATTAATCAAATCAAATCACAAATTCTTAAAGAATAGGATCACAAACTAAATCTTTTAACATGAACAATAACTGACCTTGCAGAGCTGCTCGTTTGCTACCTGAGCGTTAATAATACGCCTATGAAAGGTAGGCTATACCGTCAGCTGAGCTAACTTTGCAGTGACTCCTCGCATCACCATATCAATTCCAGCTCTTTAAATGTAACTCTGCAACTTACTCTGTCTAGTGACCAATGCCGAAGTATGGACTTTCTTTCCACTCAGGACATCTTCTACAATGTTGGCCTCTCCTGGGTGGTAAAGGATCTCGACATCATAATCTTTTACTAATTCTAACAACCTTTTCTGTCTCATATTTAGTTCCTTCTGTATGAACAAATATTTAAGACTCTTATGATCTTTATAAACTTGAATTCTCTCACCATATAGGTAATGACATCATGTCTTCAATGTAAATACCACAACTACAAGCTCAAGATCAAGTTTGGGGTAATTTCGTTCATAATACTTCATTTGTCTAGAGGTGTAGACGATTACCTTGTCATTCTTCATAAGTACACAACATAACATAGCATCACAAATCAAAGCATATCACAATATGACATGTGCAGAGGCCACAGGGTACGTGTCATCATACGTAAAATAATTCTTTCAACAAGACCGACAATGGAGCCACTTACTTTGTTGGCCTTCGTCGACGTTACTCAAGAATCCTTAGACTTGTTTGGAAAGCTCCTGATTGCTTGCTTCAACCTATATTACCAAAAGGTCCTTATTGCTTACTTCAAGAATTCTTAGGCAGAAGCATTCATGTTATTTGTAGCCCTTAAATTAGATCAGACCATTGTTTTAATTTCTCTTTATTATCTACGTTTTACGTAGTTTGTTTTTCTACTATATTTTTTCTTGTGTCTTCTCTCTTTTGTTCTTCATGTTCTCTATCTAGATTTAGTGTATGAGTTATGCGATCCCAACAATCATTTGTCGAGAGACTATATGTTCCATGATAATACTCCAAATTGTTTCAAAATATTTTAACTTGATAAAATAGCAGTCTTACCAACATCAAACTTTCTACGTGCAGGAGGAGAGGATAAGCTATGTGTGGTGGAAATTTTTGCTTTTGTAAGAGATGCGAGGACAAGCATTGGGTTAG

mRNA sequence

ATGAATAGTTGGTGGAGTAACACCCGATTTGGCAACAAGTTGAGGTTTCCAAGAGATAAATTAATAAAATGTTTCTTTTGGATGGGTGTTGCATTTGAACCTAATCTCTCATATCTTAAAAGAATGGGTACAAAAATCAATGCATTATTAACAATAATAGATGATGTTTATGATGTTTATGACACATTACATGAACTCGAGCTCTTTACGGATGCCATAGAGAGGTGGAATGTTGATGTAGTGGACAAGCTTTCTAACGAAAGAGGTGATATTCCGAAATCATTACAATGTTACATGAATGACACGGGAACCTCAGAGAGTAAAGCTCGTGAATATATAAAGCATTTGATTGATGAGACATGGAAGAAGTTAAATGAGGTTGAAGTTGAGAATTCTATCTTCCCTCAAGTGTTCATCGAGAGAGTTATGAATTTTGCTAGAATGGCTCAATACGTGTATCAATATGGAGATGGACATGACATAGAGATGCGAGGACAAGCATTGGGTTAG

Coding sequence (CDS)

ATGAATAGTTGGTGGAGTAACACCCGATTTGGCAACAAGTTGAGGTTTCCAAGAGATAAATTAATAAAATGTTTCTTTTGGATGGGTGTTGCATTTGAACCTAATCTCTCATATCTTAAAAGAATGGGTACAAAAATCAATGCATTATTAACAATAATAGATGATGTTTATGATGTTTATGACACATTACATGAACTCGAGCTCTTTACGGATGCCATAGAGAGGTGGAATGTTGATGTAGTGGACAAGCTTTCTAACGAAAGAGGTGATATTCCGAAATCATTACAATGTTACATGAATGACACGGGAACCTCAGAGAGTAAAGCTCGTGAATATATAAAGCATTTGATTGATGAGACATGGAAGAAGTTAAATGAGGTTGAAGTTGAGAATTCTATCTTCCCTCAAGTGTTCATCGAGAGAGTTATGAATTTTGCTAGAATGGCTCAATACGTGTATCAATATGGAGATGGACATGACATAGAGATGCGAGGACAAGCATTGGGTTAG

Homology

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BLAST of CmoCh20G011020 vs. Swiss-Prot
Match: ATESY_VITVI ((-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-25
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           M+SWWS+TR G KL F RD+L++ F W +GV FEP   Y +RM TK+N L+TIIDDVYDV
Sbjct: 285 MSSWWSSTRLGEKLNFARDRLMENFLWTVGVIFEPQYGYCRRMSTKVNTLITIIDDVYDV 344

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y T+ ELELFTD ++RW+++ +D L
Sbjct: 345 YGTMDELELFTDVVDRWDINAMDPL 369

[Close]

BLAST of CmoCh20G011020 vs. Swiss-Prot
Match: TPS12_RICCO (Probable terpene synthase 12 OS=Ricinus communis GN=TPS12 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           M+ WW+N    NKL F RD+L++CFFW +G+AFEP  S  ++  TK+ +L+T IDDVYDV
Sbjct: 284 MSRWWNNLGLANKLSFSRDRLMECFFWTIGMAFEPQFSSCRKGLTKVTSLITTIDDVYDV 343

Query: 61  YDTLHELELFTDAIERWNVDVVDKLSN 87
           Y TL ELE+FTDA+ERW+V+ V  L N
Sbjct: 344 YGTLDELEVFTDAVERWDVNAVRDLPN 370

[Close]

BLAST of CmoCh20G011020 vs. Swiss-Prot
Match: TPS10_RICCO (Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23
Identity = 46/85 (54.12%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           + SWW NT  G KL F RD+L++ F W +GV F P   Y +R+ TK+N+L+T+IDD+YDV
Sbjct: 249 VTSWWRNTGLGEKLSFARDRLMENFLWTVGVNFPPQFGYFRRISTKVNSLITVIDDIYDV 308

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y TL EL+LFT+A+ERW+V+ +D+L
Sbjct: 309 YGTLDELQLFTNAVERWDVNAMDQL 333

[Close]

BLAST of CmoCh20G011020 vs. Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++ WW +++ G KL F RD+L++CF W +GV FEP  SY + M TK+  LLTIIDD++D+
Sbjct: 319 LSRWWKDSKLGEKLPFVRDRLVECFLWQVGVRFEPQFSYFRIMDTKLYVLLTIIDDMHDI 378

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y TL EL+LFT+A++RW++  +DKL
Sbjct: 379 YGTLEELQLFTNALQRWDLKELDKL 403

[Close]

BLAST of CmoCh20G011020 vs. Swiss-Prot
Match: TPSGD_VITVI ((-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.4e-22
Identity = 42/85 (49.41%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           +++WW +  F +KL F RD++++C+FW +GV FEP   + +R+ TK+ A+ +IIDD+YDV
Sbjct: 256 ISAWWKDLDFAHKLPFARDRVVECYFWILGVYFEPQFFFARRILTKVIAMTSIIDDIYDV 315

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y TL ELELFT+A+ERW++  +D+L
Sbjct: 316 YGTLEELELFTEAVERWDISAIDQL 340

[Close]

BLAST of CmoCh20G011020 vs. TrEMBL
Match: A0A0A0LMX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299920 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-53
Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 4   WWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVYDT 63
           WW ++  G KL F RD+LI+ FFW +G+ FEP  SY +R  TKINAL+TIIDDVYDVY +
Sbjct: 295 WWKSSGLGQKLSFARDRLIESFFWTVGIGFEPEFSYFRRSLTKINALITIIDDVYDVYGS 354

Query: 64  LHELELFTDAIERWNVDVVDKLSNERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWK 123
           L ELELFT+A+ER     +D+L  ERGD+PKS+QCYMNDTG SES AREYI+HLIDETWK
Sbjct: 355 LDELELFTNAVER----DLDEL--ERGDVPKSIQCYMNDTGASESNAREYIRHLIDETWK 414

Query: 124 KLNEVEVEN--SIFPQVFIERVMNFARMAQYVYQYGDGH 160
           KLN+ EVEN  SIFP+VF+ER  N ARMAQ +YQYGDGH
Sbjct: 415 KLNKTEVENNYSIFPRVFVERAKNLARMAQCMYQYGDGH 447

[Close]

BLAST of CmoCh20G011020 vs. TrEMBL
Match: A0A067K1H7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22206 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.5e-40
Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 1


Query: 4   WWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVYDT 63
           WW N   G KL F RD+L++ F W +G+ FEP   Y +RM TK+N LLT IDDVYDVY T
Sbjct: 105 WWMNIGLGEKLSFARDRLMENFLWTIGMIFEPEFGYCRRMSTKVNVLLTTIDDVYDVYGT 164

Query: 64  LHELELFTDAIERWNV--DVVDKLSN-------------------------ERGDIPKSL 123
           L ELELFTDA+ER  +  D +  L                           +RGD+PKS+
Sbjct: 165 LDELELFTDAVERTPITTDALKALKEYPNITQLSAMIVRLAGDLGTSSDELKRGDVPKSI 224

Query: 124 QCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVENSIFPQVFIERVMNFARMAQYVYQY 163
           QCYM++TG SE KA E+I++LI ETW+K+N+  V +S F   F+   +  AR+AQ +Y+Y
Sbjct: 225 QCYMHETGVSEVKAHEHIRYLISETWRKINKERVVDSPFSNTFVHMAIKRARIAQCIYEY 284

[Close]

BLAST of CmoCh20G011020 vs. TrEMBL
Match: M4C949_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.1e-35
Identity = 82/200 (41.00%), Postives = 118/200 (59.00%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFWM-GVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++SWW  T   N+L F RD++++ +FW  G   EP    ++R+ TK+NALLT IDD+YD+
Sbjct: 287 VSSWWRETGLANQLHFSRDRIVENYFWTTGQIQEPQFGNVRRIITKVNALLTTIDDIYDI 346

Query: 61  YDTLHELELFTDAIERWN----------------------------------VDVVD--K 120
           Y TL EL+LFT A E W+                                  ++V+   K
Sbjct: 347 YGTLEELQLFTAAFENWDVNRLDDLPEYMRLCFLVVYNEVNNIGCDILRNKDINVIPFLK 406

Query: 121 LSNE--RGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVEN--SIFPQVFI 160
            S+E  RGD+ KS+QCYMN+TG SE KAR ++  +I++ W ++N  ++EN  S+ PQ F 
Sbjct: 407 KSDEMARGDVLKSIQCYMNETGVSEEKARMHVHKMINDMWDEMNYEKIENHSSLIPQDFA 466

[Close]

BLAST of CmoCh20G011020 vs. TrEMBL
Match: A0A166CHH4_DAUCA (Terpene synthase like-4 OS=Daucus carota subsp. sativus GN=DCAR_012537 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.8e-28
Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = 1


Query: 22  IKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVYDTLHELELFTDAIERWNVDV 81
           ++CF W +G    P  SY +++ T +   +T IDD+YDVY TL ELEL T   +RW+V  
Sbjct: 1   MECFHWSVGYNPNPEFSYGRKVLTAVTTFITTIDDIYDVYGTLEELELLTKLSKRWDVAE 60

Query: 82  VDKLSN------ERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLN-EVEVENSI 141
           +D+L +      ++GD PK +QCYMND G SE  AREY+K  + E WK+ N E++   SI
Sbjct: 61  LDQLPDYVKGELKKGDTPKLIQCYMNDNGVSEDAAREYVKRFLIEIWKEFNEEMQAAESI 120

Query: 142 FPQVFIERVMNFARMAQYVYQYGDGH 160
           F + FI+  +N AR+   +Y YGDGH
Sbjct: 121 FSKPFIDVCLNLARITTAIYMYGDGH 146

[Close]

BLAST of CmoCh20G011020 vs. TrEMBL
Match: A0A0B2QT69_GLYSO (Isoprene synthase, chloroplastic OS=Glycine soja GN=glysoja_020787 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-26
Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           M+ WW       KL F RD+L++CFFW MG+AFEP  S L++  TK+ +L+T IDDVYDV
Sbjct: 208 MSRWWKRMGLAPKLSFSRDRLMECFFWSMGMAFEPQFSDLRKGLTKVTSLITTIDDVYDV 267

Query: 61  YDTLHELELFTDAIER--------------------WNV--------------DVVDKLS 120
           Y +L ELELFT A+E                     +N               +++  L+
Sbjct: 268 YGSLDELELFTKAVESWDIKAVQVMPEYMKICFLALYNTVNEFAYDALKIKGQNILPHLT 327

Query: 121 N----ERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVENSIFPQVFIER 160
                +RG+   S+ C M ++  +E  A + I  L+DETWKK+N+    +S F + F+E 
Sbjct: 328 KAAELQRGEAASSIVCNMRESCVTEEGAYKNIHSLLDETWKKMNKDRAMHSPFSKPFVEA 387

[Close]

BLAST of CmoCh20G011020 vs. TAIR10
Match: AT3G25830.1 (AT3G25830.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 41/101 (40.59%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++ WW +T   N+L F RD++++ +FW +G+ +EP   Y++R+ T +NAL+T IDD+YD+
Sbjct: 288 VSRWWKDTCLTNQLPFVRDRIVENYFWTVGLIYEPQFGYIRRIMTIVNALVTTIDDIYDI 347

Query: 61  YDTLHELELFTDAIERWNVDVVDKLSNERGDIPKSLQ-CYM 100
           Y TL ELELFT  +E W+V       N  G++P+ ++ C++
Sbjct: 348 YGTLEELELFTSMVENWDV-------NRLGELPEYMRLCFL 381

[Close]

BLAST of CmoCh20G011020 vs. TAIR10
Match: AT3G25820.1 (AT3G25820.1 terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 41/101 (40.59%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++ WW +T   N+L F RD++++ +FW +G+ +EP   Y++R+ T +NAL+T IDD+YD+
Sbjct: 288 VSRWWKDTCLTNQLPFVRDRIVENYFWTVGLIYEPQFGYIRRIMTIVNALVTTIDDIYDI 347

Query: 61  YDTLHELELFTDAIERWNVDVVDKLSNERGDIPKSLQ-CYM 100
           Y TL ELELFT  +E W+V       N  G++P+ ++ C++
Sbjct: 348 YGTLEELELFTSMVENWDV-------NRLGELPEYMRLCFL 381

[Close]

BLAST of CmoCh20G011020 vs. TAIR10
Match: AT2G24210.1 (AT2G24210.1 terpene synthase 10)

HSP 1 Score: 94.7 bits (234), Expect = 5.7e-20
Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++SWW  T  G +L F RD++++ +FW +G   EP   Y+++  TKINALLT IDD+YD+
Sbjct: 285 VSSWWMETGLGKQLYFARDRIVENYFWTIGQIQEPQYGYVRQTMTKINALLTTIDDIYDI 344

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y TL EL+LFT A E W+++ +D+L
Sbjct: 345 YGTLEELQLFTVAFENWDINRLDEL 369

[Close]

BLAST of CmoCh20G011020 vs. TAIR10
Match: AT4G16730.1 (AT4G16730.1 terpene synthase 02)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 38/87 (43.68%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++SWW++T    +L F RD++ + +FW +G+ +EP   Y +++ TKI  L+ I+DD+YD+
Sbjct: 235 ISSWWNSTGLMKQLDFVRDRITESYFWTIGIFYEPEFKYCRKILTKIFMLIVIMDDIYDI 294

Query: 61  YDTLHELELFTDAIERWNVDVVDKLSN 87
           Y TL ELELFT+ +E+W+V+ V++L N
Sbjct: 295 YGTLEELELFTNVVEKWDVNHVERLPN 321

[Close]

BLAST of CmoCh20G011020 vs. TAIR10
Match: AT3G25810.1 (AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 34/85 (40.00%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1   MNSWWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDV 60
           ++ WW  T  G++L F RD++++ +FW +G+ +EP   Y++R+   + AL+T+IDD+YD+
Sbjct: 290 VSCWWKETGLGSQLHFVRDRIVENYFWTVGMIYEPQFGYIRRIVAIVAALITVIDDIYDI 349

Query: 61  YDTLHELELFTDAIERWNVDVVDKL 85
           Y T  ELELFT  ++ W+++ +D+L
Sbjct: 350 YGTPEELELFTAMVQNWDINRLDEL 374

[Close]

BLAST of CmoCh20G011020 vs. NCBI nr
Match: gi|700207003|gb|KGN62122.1| (hypothetical protein Csa_2G299920 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-53
Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 4   WWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVYDT 63
           WW ++  G KL F RD+LI+ FFW +G+ FEP  SY +R  TKINAL+TIIDDVYDVY +
Sbjct: 295 WWKSSGLGQKLSFARDRLIESFFWTVGIGFEPEFSYFRRSLTKINALITIIDDVYDVYGS 354

Query: 64  LHELELFTDAIERWNVDVVDKLSNERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWK 123
           L ELELFT+A+ER     +D+L  ERGD+PKS+QCYMNDTG SES AREYI+HLIDETWK
Sbjct: 355 LDELELFTNAVER----DLDEL--ERGDVPKSIQCYMNDTGASESNAREYIRHLIDETWK 414

Query: 124 KLNEVEVEN--SIFPQVFIERVMNFARMAQYVYQYGDGH 160
           KLN+ EVEN  SIFP+VF+ER  N ARMAQ +YQYGDGH
Sbjct: 415 KLNKTEVENNYSIFPRVFVERAKNLARMAQCMYQYGDGH 447

[Close]

BLAST of CmoCh20G011020 vs. NCBI nr
Match: gi|643713138|gb|KDP26105.1| (hypothetical protein JCGZ_22206 [Jatropha curcas])

HSP 1 Score: 172.2 bits (435), Expect = 7.9e-40
Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 1


Query: 4   WWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVYDT 63
           WW N   G KL F RD+L++ F W +G+ FEP   Y +RM TK+N LLT IDDVYDVY T
Sbjct: 105 WWMNIGLGEKLSFARDRLMENFLWTIGMIFEPEFGYCRRMSTKVNVLLTTIDDVYDVYGT 164

Query: 64  LHELELFTDAIERWNV--DVVDKLSN-------------------------ERGDIPKSL 123
           L ELELFTDA+ER  +  D +  L                           +RGD+PKS+
Sbjct: 165 LDELELFTDAVERTPITTDALKALKEYPNITQLSAMIVRLAGDLGTSSDELKRGDVPKSI 224

Query: 124 QCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVENSIFPQVFIERVMNFARMAQYVYQY 163
           QCYM++TG SE KA E+I++LI ETW+K+N+  V +S F   F+   +  AR+AQ +Y+Y
Sbjct: 225 QCYMHETGVSEVKAHEHIRYLISETWRKINKERVVDSPFSNTFVHMAIKRARIAQCIYEY 284

[Close]

BLAST of CmoCh20G011020 vs. NCBI nr
Match: gi|502088158|ref|XP_004488754.1| (PREDICTED: myrcene synthase, chloroplastic-like isoform X2 [Cicer arietinum])

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 1


Query: 4   WWSNTRFGNKLRFPRDKLIKCFFW-MGVAFEPNLSYLKRMGTKINALLTIIDDVYDVY-- 63
           WW  T  G KL F RD+L++ F W MG  F+P   Y +++ TK+N+ +T IDDVYDVY  
Sbjct: 285 WWKRTELGEKLSFSRDRLVENFVWTMGTNFKPEFEYFRKVITKVNSFITTIDDVYDVYGT 344

Query: 64  ----------------DTLHEL----------------ELFTDAIERWNVDVVDKLSN-- 123
                             ++ L                EL  + +++    ++  L    
Sbjct: 345 LEELELFTHTIERWDLSAMNSLPYYMKICFLALYNFVNELAFEILKKSGYYIIPYLKKVR 404

Query: 124 --ERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVENSIFPQVFIERVMN 163
             E GDIPKS+QCYMN++G SE +A +YIK +I   WKK+N+ E   S F Q FI+  +N
Sbjct: 405 EIETGDIPKSIQCYMNESGVSEVEACDYIKSMICTMWKKMNK-EAHTSSFSQSFIDTCIN 464

[Close]

BLAST of CmoCh20G011020 vs. NCBI nr
Match: gi|449465932|ref|XP_004150681.1| (PREDICTED: terpene synthase 10-like [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28
Identity = 74/147 (50.34%), Postives = 93/147 (63.27%), Query Frame = 1


Query: 27  WMGVAFEPNLS-YLKRMGTKINALLTIIDD-VYDVYDTLHELELFTDAIE--RWNVDVV- 86
           W    ++P L  YL      I+  + ++   V+    TL  +E     I+  RW+  ++ 
Sbjct: 427 WYHTNYKPTLEEYLDNAWISISGTVLLVHTYVFVTSSTLENMESLKQHIDMIRWSSTILR 486

Query: 87  --DKLSN-----ERGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVEN--S 146
             D L       ERGD+PKS+QCYMNDTG SES AREYI+HLIDETWKKLN+ EVEN  S
Sbjct: 487 LADDLGTSSDELERGDVPKSIQCYMNDTGASESNAREYIRHLIDETWKKLNKTEVENNYS 546

Query: 147 IFPQVFIERVMNFARMAQYVYQYGDGH 160
           IFP+VF+ER  N ARMAQ +YQYGDGH
Sbjct: 547 IFPRVFVERAKNLARMAQCMYQYGDGH 573

[Close]

BLAST of CmoCh20G011020 vs. NCBI nr
Match: gi|659122221|ref|XP_008461028.1| (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28
Identity = 71/147 (48.30%), Postives = 95/147 (64.63%), Query Frame = 1


Query: 27  WMGVAFEPNLS-YLKRMGTKINALLTIIDD-VYDVYDTLHELELFTDAIE--RWNVDVV- 86
           W    ++P L  YL      I+  + ++   V+    TL  +E     ++  RW+  ++ 
Sbjct: 422 WYHTNYKPTLEEYLDNAWISISGPVVLVHAYVFVTTPTLENMESLKQYVDVIRWSSTILR 481

Query: 87  --DKLSNE-----RGDIPKSLQCYMNDTGTSESKAREYIKHLIDETWKKLNEVEVENSIF 146
             D L        RGD+PKS+QCYMNDTG+SES AR++I+HLIDETWKKLN+V+V+NSIF
Sbjct: 482 LADDLGTSSDELARGDVPKSIQCYMNDTGSSESDARKHIRHLIDETWKKLNKVQVQNSIF 541

Query: 147 PQVFIERVMNFARMAQYVYQYGDGHDI 162
           PQVFIER  N AR AQ++YQYGDGH I
Sbjct: 542 PQVFIERAKNVARTAQFMYQYGDGHGI 568

The following BLAST results are available for this feature:

BLAST of CmoCh20G011020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATESY_VITVI	2.5e-25	58.82	(-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1	[more]
TPS12_RICCO	3.9e-23	56.32	Probable terpene synthase 12 OS=Ricinus communis GN=TPS12 PE=3 SV=1	[more]
TPS10_RICCO	3.9e-23	54.12	Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1	[more]
TPS1_CANSA	5.7e-22	51.76	(-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1	[more]
TPSGD_VITVI	7.4e-22	49.41	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	[more]

BLAST of CmoCh20G011020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMX2_CUCSA	2.5e-53	67.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G299920 PE=3 SV=1	[more]
A0A067K1H7_JATCU	5.5e-40	45.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22206 PE=3 SV=1	[more]
M4C949_BRARP	9.1e-35	41.00	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]
A0A166CHH4_DAUCA	4.8e-28	44.52	Terpene synthase like-4 OS=Daucus carota subsp. sativus GN=DCAR_012537 PE=4 SV=1	[more]
A0A0B2QT69_GLYSO	4.5e-26	36.36	Isoprene synthase, chloroplastic OS=Glycine soja GN=glysoja_020787 PE=3 SV=1	[more]

BLAST of CmoCh20G011020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25830.1	4.3e-20	40.59	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25820.1	4.3e-20	40.59	terpene synthase-like sequence-1,8-cineole	[more]
AT2G24210.1	5.7e-20	48.24	terpene synthase 10	[more]
AT4G16730.1	1.3e-19	43.68	terpene synthase 02	[more]
AT3G25810.1	1.8e-18	40.00	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]

BLAST of CmoCh20G011020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207003\|gb\|KGN62122.1\|	3.7e-53	67.30	hypothetical protein Csa_2G299920 [Cucumis sativus]	[more]
gi\|643713138\|gb\|KDP26105.1\|	7.9e-40	45.99	hypothetical protein JCGZ_22206 [Jatropha curcas]	[more]
gi\|502088158\|ref\|XP_004488754.1\|	1.1e-28	37.37	PREDICTED: myrcene synthase, chloroplastic-like isoform X2 [Cicer arietinum]	[more]
gi\|449465932\|ref\|XP_004150681.1\|	5.3e-28	50.34	PREDICTED: terpene synthase 10-like [Cucumis sativus]	[more]
gi\|659122221\|ref\|XP_008461028.1\|	5.3e-28	48.30	PREDICTED: terpene synthase 10-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005630	Terpene_synthase_metal-bd
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0000287	magnesium ion binding
GO:0010333	terpene synthase activity
GO:0016829	lyase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0016829	lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G011020.1	CmoCh20G011020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 86..123 score: 1.3E-6coord: 2..86 score: 4.4
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 2..86 score: 3.2E-29coord: 87..161 score: 5.3
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 3..157 score: 3.2
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 1..164 score: 4.1
None	No IPR available	PANTHER	PTHR31225:SF16	1,8-CINEOLE SYNTHASE 1, CHLOROPLASTIC-RELATED	coord: 1..164 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G011020	Cla007777	Watermelon (97103) v1	cmowmB521
CmoCh20G011020	Csa2G299910	Cucumber (Chinese Long) v2	cmocuB532
CmoCh20G011020	Lsi10G006910	Bottle gourd (USVL1VR-Ls)	cmolsiB492

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G011020	Silver-seed gourd	carcmoB1417
CmoCh20G011020	Cucumber (Chinese Long) v3	cmocucB0638
CmoCh20G011020	Watermelon (97103) v2	cmowmbB546
CmoCh20G011020	Wax gourd	cmowgoB0682
CmoCh20G011020	Cucurbita moschata (Rifu)	cmocmoB407
CmoCh20G011020	Cucumber (Gy14) v1	cgycmoB0696
CmoCh20G011020	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G011020	Cucurbita maxima (Rimu)	cmacmoB609
CmoCh20G011020	Wild cucumber (PI 183967)	cmocpiB537
CmoCh20G011020	Cucumber (Chinese Long) v2	cmocuB530
CmoCh20G011020	Melon (DHL92) v3.5.1	cmomeB486
CmoCh20G011020	Melon (DHL92) v3.5.1	cmomeB492
CmoCh20G011020	Watermelon (Charleston Gray)	cmowcgB480
CmoCh20G011020	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G011020	Cucurbita pepo (Zucchini)	cmocpeB538
CmoCh20G011020	Cucumber (Gy14) v2	cgybcmoB210